Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:01:04 (1719273): wrapper (7.7.26015): starting
01:01:04 (1719273): wrapper: running run_atlas (--nthreads 3)
[2025-04-20 01:01:04] Arguments: --nthreads 3
[2025-04-20 01:01:04] Threads: 3
[2025-04-20 01:01:04] Checking for CVMFS
[2025-04-20 01:01:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 01:01:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 01:01:04] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 01:01:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 01:01:05] 2.9.2.0 2830 6580 71724 145054 1 56 25195539 36864001 0 130560 0 4446667 99.989 1740072 9957 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-20 01:01:05] CVMFS is ok
[2025-04-20 01:01:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-20 01:01:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-20 01:01:05] Further information can be found at the LHC@home message board.
[2025-04-20 01:01:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 01:01:05] Checking for apptainer binary...
[2025-04-20 01:01:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 01:01:05] Running /usr/bin/apptainer --version
[2025-04-20 01:01:05] apptainer version 1.3.6-6.1
[2025-04-20 01:01:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 01:01:05] thA389a
[2025-04-20 01:01:05] apptainer works
[2025-04-20 01:01:05] Set ATHENA_PROC_NUMBER=3
[2025-04-20 01:01:05] Set ATHENA_CORE_NUMBER=3
[2025-04-20 01:01:05] Starting ATLAS job with PandaID=6607984266
[2025-04-20 01:01:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 02:40:01]  *** The last 200 lines of the pilot log: ***
[2025-04-20 02:40:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-20 02:40:01]  is_altstaged=None
[2025-04-20 02:40:01]  is_tar=False
[2025-04-20 02:40:01]  lfn=log.44075483._085277.job.log.tgz.1
[2025-04-20 02:40:01]  mtime=0
[2025-04-20 02:40:01]  protocol_id=None
[2025-04-20 02:40:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 02:40:01]  replicas=None
[2025-04-20 02:40:01]  scope=mc23_13p6TeV
[2025-04-20 02:40:01]  status=None
[2025-04-20 02:40:01]  status_code=0
[2025-04-20 02:40:01]  storage_token=
[2025-04-20 02:40:01]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607984266/log.44075483._085277.job.log.tgz.1
[2025-04-20 02:40:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/20/log.44075483._085277.job.log.tgz.1
[2025-04-20 02:40:01]  workdir=None
[2025-04-20 02:40:01] ]
[2025-04-20 02:40:01] 2025-04-20 00:39:35,194 | INFO     | transferring file log.44075483._085277.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607984266/log.44075483._085277.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 02:40:01] 2025-04-20 00:39:35,194 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607984266/log.44075483._085277.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0852
[2025-04-20 02:40:01] 2025-04-20 00:39:35,206 | INFO     | adding to output.list: log.44075483._085277.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/41/20/log.44075483._085277.job.log.tg
[2025-04-20 02:40:01] 2025-04-20 00:39:35,207 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 02:40:01] 2025-04-20 00:39:35,207 | INFO     | summary of transferred files:
[2025-04-20 02:40:01] 2025-04-20 00:39:35,207 | INFO     |  -- lfn=log.44075483._085277.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 02:40:01] 2025-04-20 00:39:35,207 | INFO     | stage-out finished correctly
[2025-04-20 02:40:01] 2025-04-20 00:39:35,844 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 02:40:01] 2025-04-20 00:39:37,137 | INFO     | job 6607984266 has state=finished
[2025-04-20 02:40:01] 2025-04-20 00:39:37,138 | INFO     | preparing for final server update for job 6607984266 in state='finished'
[2025-04-20 02:40:01] 2025-04-20 00:39:37,139 | INFO     | this job has now completed (state=finished)
[2025-04-20 02:40:01] 2025-04-20 00:39:37,139 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 02:40:01] 2025-04-20 00:39:37,139 | INFO     | log transfer has been attempted: DONE
[2025-04-20 02:40:01] 2025-04-20 00:39:37,140 | INFO     | job 6607984266 has finished - writing final server update
[2025-04-20 02:40:01] 2025-04-20 00:39:37,140 | INFO     | total number of processed events: 400 (read)
[2025-04-20 02:40:01] 2025-04-20 00:39:37,143 | INFO     | executing command: lscpu
[2025-04-20 02:40:01] 2025-04-20 00:39:37,160 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 02:40:01] 2025-04-20 00:39:37,550 | WARNING  | process 1729364 can no longer be monitored (due to stat problems) - aborting
[2025-04-20 02:40:01] 2025-04-20 00:39:37,551 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607984266/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 02:40:01] 2025-04-20 00:39:37,598 | INFO     | PID=1722932 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-20 02:40:01] 2025-04-20 00:39:37,634 | INFO     | number of running child processes to parent process 1729364: 1
[2025-04-20 02:40:01] 2025-04-20 00:39:37,634 | INFO     | maximum number of monitored processes: 6
[2025-04-20 02:40:01] 2025-04-20 00:39:40,137 | INFO     | monitor loop #454: job 0:6607984266 is in state 'finished'
[2025-04-20 02:40:01] 2025-04-20 00:39:40,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 02:40:01] 2025-04-20 00:39:40,982 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 02:40:01] 2025-04-20 00:39:40,983 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607984266/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 02:40:01] 2025-04-20 00:39:40,983 | INFO     | extracted standard info from prmon json
[2025-04-20 02:40:01] 2025-04-20 00:39:40,983 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 02:40:01] 2025-04-20 00:39:40,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 02:40:01] 2025-04-20 00:39:40,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 02:40:01] 2025-04-20 00:39:40,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | fitting pss+swap vs Time
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | sum of square deviations: 226022842.5
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | sum of deviations: 10368938355.999998
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | mean x: 1745106719.5
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | mean y: 2308232.8666666667
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | -- intersect: -80055546977.6609
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | intersect: -80055546977.6609
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | chi2: 1.2307952477808712
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | -- intersect: -80055546977.6609
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | current memory leak: 45.88 B/s (using 90 data points, chi2=1.23)
[2025-04-20 02:40:01] 2025-04-20 00:39:40,984 | INFO     | ..............................
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | . Timing measurements:
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | . get job = 0 s
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | . initial setup = 1 s
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | . payload setup = 5 s
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | . stage-in = 0 s
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | . payload execution = 5874 s
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | . stage-out = 0 s
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | . log creation = 0 s
[2025-04-20 02:40:01] 2025-04-20 00:39:40,985 | INFO     | ..............................
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | 
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | job summary report
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | --------------------------------------------------
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | PanDA job id: 6607984266
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | task id: 44075483
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | errors: (none)
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | pilot state: finished 
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | transexitcode: 0
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | exeerrorcode: 0
[2025-04-20 02:40:01] 2025-04-20 00:39:41,016 | INFO     | exeerrordiag: 
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | exitcode: 0
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | exitmsg: OK
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | cpuconsumptiontime: 15733 s
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | nevents: 400
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | neventsw: 0
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | pid: 1729364
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | pgrp: 1729364
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | corecount: 3
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | event service: False
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | sizes: {0: 2426777, 4: 2426983, 11: 2427011, 5883: 2453679, 5884: 2462626, 5885: 2462682, 5890: 2462980}
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | --------------------------------------------------
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | 
[2025-04-20 02:40:01] 2025-04-20 00:39:41,017 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | job 6607984266 has completed (purged errors)
[2025-04-20 02:40:01] 2025-04-20 00:39:41,029 | INFO     | overall cleanup function is called
[2025-04-20 02:40:01] 2025-04-20 00:39:42,036 | INFO     | --- collectZombieJob: --- 10, [1729364]
[2025-04-20 02:40:01] 2025-04-20 00:39:42,038 | INFO     | zombie collector waiting for pid 1729364
[2025-04-20 02:40:01] 2025-04-20 00:39:42,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 02:40:01] 2025-04-20 00:39:42,040 | INFO     | collected zombie processes
[2025-04-20 02:40:01] 2025-04-20 00:39:42,041 | INFO     | will attempt to kill all subprocesses of pid=1729364
[2025-04-20 02:40:01] 2025-04-20 00:39:42,150 | INFO     | process IDs to be killed: [1729364] (in reverse order)
[2025-04-20 02:40:01] 2025-04-20 00:39:42,175 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 02:40:01] 2025-04-20 00:39:42,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 02:40:01] 2025-04-20 00:39:42,176 | INFO     | did not find any defunct processes belonging to 1729364
[2025-04-20 02:40:01] 2025-04-20 00:39:42,177 | INFO     | did not find any defunct processes belonging to 1729364
[2025-04-20 02:40:01] 2025-04-20 00:39:42,177 | INFO     | ready for new job
[2025-04-20 02:40:01] 2025-04-20 00:39:42,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 02:40:01] 2025-04-20 00:39:42,178 | INFO     | **************************************
[2025-04-20 02:40:01] 2025-04-20 00:39:42,178 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 02:40:01] 2025-04-20 00:39:42,178 | INFO     | **************************************
[2025-04-20 02:40:01] 2025-04-20 00:39:42,178 | INFO     | 
[2025-04-20 02:40:01] 2025-04-20 00:39:42,178 | INFO     | architecture information:
[2025-04-20 02:40:01] 2025-04-20 00:39:42,178 | INFO     | executing command: cat /etc/os-release
[2025-04-20 02:40:01] 2025-04-20 00:39:42,188 | INFO     | cat /etc/os-release:
[2025-04-20 02:40:01] NAME="CentOS Linux"
[2025-04-20 02:40:01] VERSION="7 (Core)"
[2025-04-20 02:40:01] ID="centos"
[2025-04-20 02:40:01] ID_LIKE="rhel fedora"
[2025-04-20 02:40:01] VERSION_ID="7"
[2025-04-20 02:40:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 02:40:01] ANSI_COLOR="0;31"
[2025-04-20 02:40:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 02:40:01] HOME_URL="https://www.centos.org/"
[2025-04-20 02:40:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 02:40:01] 
[2025-04-20 02:40:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 02:40:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 02:40:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 02:40:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 02:40:01] 
[2025-04-20 02:40:01] 2025-04-20 00:39:42,188 | INFO     | **************************************
[2025-04-20 02:40:01] 2025-04-20 00:39:42,691 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 02:40:01] 2025-04-20 00:39:42,704 | INFO     | sufficient remaining disk space (230679379968 B)
[2025-04-20 02:40:01] 2025-04-20 00:39:42,704 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 02:40:01] 2025-04-20 00:39:42,704 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 02:40:01] 2025-04-20 00:39:42,704 | INFO     | update_server=False
[2025-04-20 02:40:01] 2025-04-20 00:39:42,704 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 02:40:01] 2025-04-20 00:39:42,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 02:40:01] 2025-04-20 00:39:42,705 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 02:40:01] 2025-04-20 00:39:43,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 02:40:01] 2025-04-20 00:39:43,376 | INFO     | all payload control threads have been joined
[2025-04-20 02:40:01] 2025-04-20 00:39:43,537 | INFO     | all data control threads have been joined
[2025-04-20 02:40:01] 2025-04-20 00:39:43,616 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 02:40:01] 2025-04-20 00:39:43,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 02:40:01] 2025-04-20 00:39:43,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 02:40:01] 2025-04-20 00:39:43,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 02:40:01] 2025-04-20 00:39:43,647 | INFO     | aborting loop
[2025-04-20 02:40:01] 2025-04-20 00:39:43,710 | INFO     | [job] queue monitor thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:43,710 | INFO     | [job] retrieve thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:43,734 | INFO     | [payload] validate_post thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:43,894 | INFO     | all job control threads have been joined
[2025-04-20 02:40:01] 2025-04-20 00:39:43,963 | INFO     | [data] copytool_in thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,216 | INFO     | [job] validate thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,278 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,382 | INFO     | [payload] control thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,479 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,543 | INFO     | [data] control thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,653 | INFO     | [job] job monitor thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,711 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,738 | INFO     | [payload] failed_post thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:44,900 | INFO     | [job] control thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:45,258 | INFO     | [data] copytool_out thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:46,711 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:53,652 | INFO     | job.realtimelogging is not enabled
[2025-04-20 02:40:01] 2025-04-20 00:39:54,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 02:40:01] 2025-04-20 00:39:56,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132155270976)>', '<ExcThread(monitor, started 140131679852288)>']
[2025-04-20 02:40:01] 2025-04-20 00:39:56,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 02:40:01] 2025-04-20 00:39:56,686 | INFO     | [monitor] control thread has ended
[2025-04-20 02:40:01] 2025-04-20 00:40:01,622 | INFO     | all workflow threads have been joined
[2025-04-20 02:40:01] 2025-04-20 00:40:01,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 02:40:01] 2025-04-20 00:40:01,623 | INFO     | traces error code: 0
[2025-04-20 02:40:01] 2025-04-20 00:40:01,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 02:40:01] 2025-04-20 00:40:01,670 [wrapper] ==== pilot stdout END ====
[2025-04-20 02:40:01] 2025-04-20 00:40:01,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 02:40:01] 2025-04-20 00:40:01,677 [wrapper] pilotpid: 1722932
[2025-04-20 02:40:01] 2025-04-20 00:40:01,679 [wrapper] Pilot exit status: 0
[2025-04-20 02:40:01] 2025-04-20 00:40:01,687 [wrapper] pandaids: 6607984266
[2025-04-20 02:40:01] 2025-04-20 00:40:01,704 [wrapper] cleanup supervisor_pilot 1742122 1722933
[2025-04-20 02:40:01] 2025-04-20 00:40:01,707 [wrapper] Test setup, not cleaning
[2025-04-20 02:40:01] 2025-04-20 00:40:01,710 [wrapper] apfmon messages muted
[2025-04-20 02:40:01] 2025-04-20 00:40:01,713 [wrapper] ==== wrapper stdout END ====
[2025-04-20 02:40:01] 2025-04-20 00:40:01,715 [wrapper] ==== wrapper stderr END ====
[2025-04-20 02:40:01]  *** Error codes and diagnostics ***
[2025-04-20 02:40:01]     "exeErrorCode": 0,
[2025-04-20 02:40:01]     "exeErrorDiag": "",
[2025-04-20 02:40:01]     "pilotErrorCode": 0,
[2025-04-20 02:40:01]     "pilotErrorDiag": "",
[2025-04-20 02:40:01]  *** Listing of results directory ***
[2025-04-20 02:40:01] total 416048
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc    495897 Apr 19 18:09 pilot3.tar.gz
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc      5111 Apr 19 18:11 queuedata.json
[2025-04-20 02:40:01] -rwx------ 1 boinc boinc     37140 Apr 19 18:12 runpilot2-wrapper.sh
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc       100 Apr 20 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 02:40:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 20 01:01 run_atlas
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc       105 Apr 20 01:01 job.xml
[2025-04-20 02:40:01] -rw-r--r-- 2 boinc boinc 226376093 Apr 20 01:01 EVNT.44075481._002281.pool.root.1
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc      6680 Apr 20 01:01 init_data.xml
[2025-04-20 02:40:01] drwxrwx--x 2 boinc boinc      4096 Apr 20 01:01 shared
[2025-04-20 02:40:01] -rw-r--r-- 2 boinc boinc    508893 Apr 20 01:01 input.tar.gz
[2025-04-20 02:40:01] -rw-r--r-- 2 boinc boinc     17569 Apr 20 01:01 start_atlas.sh
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc         0 Apr 20 01:01 boinc_lockfile
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc      2579 Apr 20 01:01 pandaJob.out
[2025-04-20 02:40:01] -rw------- 1 boinc boinc       424 Apr 20 01:01 setup.sh.local
[2025-04-20 02:40:01] -rw------- 1 boinc boinc    991300 Apr 20 01:01 agis_schedconf.cvmfs.json
[2025-04-20 02:40:01] -rw------- 1 boinc boinc   1618536 Apr 20 01:01 agis_ddmendpoints.agis.ALL.json
[2025-04-20 02:40:01] drwx------ 4 boinc boinc      4096 Apr 20 01:01 pilot3
[2025-04-20 02:40:01] -rw------- 1 boinc boinc 194193095 Apr 20 02:39 HITS.44075483._085277.pool.root.1
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc       530 Apr 20 02:39 boinc_task_state.xml
[2025-04-20 02:40:01] -rw------- 1 boinc boinc      1023 Apr 20 02:39 memory_monitor_summary.json
[2025-04-20 02:40:01] -rw------- 1 boinc boinc    230950 Apr 20 02:39 log.44075483._085277.job.log.tgz.1
[2025-04-20 02:40:01] -rw------- 1 boinc boinc      7655 Apr 20 02:39 heartbeat.json
[2025-04-20 02:40:01] -rw------- 1 boinc boinc        95 Apr 20 02:39 pilot_heartbeat.json
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc      8192 Apr 20 02:40 boinc_mmap_file
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc        27 Apr 20 02:40 wrapper_checkpoint.txt
[2025-04-20 02:40:01] -rw------- 1 boinc boinc      4429 Apr 20 02:40 pilotlog.txt
[2025-04-20 02:40:01] -rw------- 1 boinc boinc    564936 Apr 20 02:40 log.44075483._085277.job.log.1
[2025-04-20 02:40:01] -rw------- 1 boinc boinc       357 Apr 20 02:40 output.list
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc       620 Apr 20 02:40 runtime_log
[2025-04-20 02:40:01] -rw------- 1 boinc boinc    819200 Apr 20 02:40 result.tar.gz
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc     11104 Apr 20 02:40 runtime_log.err
[2025-04-20 02:40:01] -rw------- 1 boinc boinc       659 Apr 20 02:40 HnfLDmEzPQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgMiLDmZfKKFo.diag
[2025-04-20 02:40:01] -rw-r--r-- 1 boinc boinc     21430 Apr 20 02:40 stderr.txt
[2025-04-20 02:40:01] HITS file was successfully produced:
[2025-04-20 02:40:01] -rw------- 1 boinc boinc 194193095 Apr 20 02:39 shared/HITS.pool.root.1
[2025-04-20 02:40:01]  *** Contents of shared directory: ***
[2025-04-20 02:40:01] total 412044
[2025-04-20 02:40:01] -rw-r--r-- 2 boinc boinc 226376093 Apr 20 01:01 ATLAS.root_0
[2025-04-20 02:40:01] -rw-r--r-- 2 boinc boinc    508893 Apr 20 01:01 input.tar.gz
[2025-04-20 02:40:01] -rw-r--r-- 2 boinc boinc     17569 Apr 20 01:01 start_atlas.sh
[2025-04-20 02:40:01] -rw------- 1 boinc boinc 194193095 Apr 20 02:39 HITS.pool.root.1
[2025-04-20 02:40:01] -rw------- 1 boinc boinc    819200 Apr 20 02:40 result.tar.gz
02:40:24 (1719273): run_atlas exited; CPU time 15758.560552
02:40:24 (1719273): called boinc_finish(0)

</stderr_txt>
]]>

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