Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:38:08 (3180506): wrapper (7.7.26015): starting
14:38:08 (3180506): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 14:38:08] Arguments: --nthreads 8
[2025-04-19 14:38:08] Threads: 8
[2025-04-19 14:38:08] Checking for CVMFS
[2025-04-19 14:38:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 14:38:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 14:38:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 14:38:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 14:38:11] 2.12.6.0 345227 75692 636272 145048 1 441 31307532 32935937 33130 130560 0 186489809 99.667 160727240 18554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 14:38:11] CVMFS is ok
[2025-04-19 14:38:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 14:38:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 14:38:11] Further information can be found at the LHC@home message board.
[2025-04-19 14:38:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 14:38:11] Checking for apptainer binary...
[2025-04-19 14:38:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 14:38:11] Running /usr/bin/apptainer --version
[2025-04-19 14:38:11] apptainer version 1.4.0-1.el9
[2025-04-19 14:38:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 14:38:13] c-3-40.aglt2.org
[2025-04-19 14:38:13] apptainer works
[2025-04-19 14:38:13] Set ATHENA_PROC_NUMBER=8
[2025-04-19 14:38:13] Set ATHENA_CORE_NUMBER=8
[2025-04-19 14:38:13] Starting ATLAS job with PandaID=6607874147
[2025-04-19 14:38:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 05:02:24]  *** The last 200 lines of the pilot log: ***
[2025-04-20 05:02:24] 2025-04-20 09:01:29,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 05:02:24] 2025-04-20 09:01:29,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 05:02:24] 2025-04-20 09:01:29,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 05:02:24] 2025-04-20 09:01:29,874 | INFO     | fitting pss+swap vs Time
[2025-04-20 05:02:24] 2025-04-20 09:01:29,909 | INFO     | sum of square deviations: 185763689694.65134
[2025-04-20 05:02:24] 2025-04-20 09:01:30,033 | INFO     | monitor loop #1957: job 0:6607874147 is in state 'finished'
[2025-04-20 05:02:24] 2025-04-20 09:01:30,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 05:02:24] 2025-04-20 09:01:30,054 | INFO     | sum of deviations: 573280638891.9033
[2025-04-20 05:02:24] 2025-04-20 09:01:30,055 | INFO     | mean x: 1745113915.361803
[2025-04-20 05:02:24] 2025-04-20 09:01:30,055 | INFO     | mean y: 2012596.6429418742
[2025-04-20 05:02:24] 2025-04-20 09:01:30,055 | INFO     | -- intersect: -5383539455.979595
[2025-04-20 05:02:24] 2025-04-20 09:01:30,055 | INFO     | intersect: -5383539455.979595
[2025-04-20 05:02:24] 2025-04-20 09:01:30,056 | INFO     | chi2: 13.13003007299853
[2025-04-20 05:02:24] 2025-04-20 09:01:30,061 | INFO     | sum of square deviations: 182477841519.94345
[2025-04-20 05:02:24] 2025-04-20 09:01:30,132 | INFO     | sum of deviations: 784408575358.7104
[2025-04-20 05:02:24] 2025-04-20 09:01:30,155 | INFO     | mean x: 1745113762.8615751
[2025-04-20 05:02:24] 2025-04-20 09:01:30,155 | INFO     | mean y: 2022395.96300716
[2025-04-20 05:02:24] 2025-04-20 09:01:30,156 | INFO     | -- intersect: -7499612811.70421
[2025-04-20 05:02:24] 2025-04-20 09:01:30,156 | INFO     | intersect: -7499612811.70421
[2025-04-20 05:02:24] 2025-04-20 09:01:30,157 | INFO     | chi2: 9.784235171575405
[2025-04-20 05:02:24] 2025-04-20 09:01:30,157 | INFO     | current chi2=9.784235171575405 (change=25.482004860778197 %)
[2025-04-20 05:02:24] 2025-04-20 09:01:30,158 | INFO     | sum of square deviations: 179230970454.23514
[2025-04-20 05:02:24] 2025-04-20 09:01:30,226 | INFO     | sum of deviations: 789821846262.6384
[2025-04-20 05:02:24] 2025-04-20 09:01:30,226 | INFO     | mean x: 1745113610.3613446
[2025-04-20 05:02:24] 2025-04-20 09:01:30,226 | INFO     | mean y: 2022650.144057623
[2025-04-20 05:02:24] 2025-04-20 09:01:30,226 | INFO     | -- intersect: -7688215539.051031
[2025-04-20 05:02:24] 2025-04-20 09:01:30,226 | INFO     | intersect: -7688215539.051031
[2025-04-20 05:02:24] 2025-04-20 09:01:30,234 | INFO     | chi2: 9.761291972486223
[2025-04-20 05:02:24] 2025-04-20 09:01:30,235 | INFO     | current chi2=9.761291972486223 (change=0.23449149255769572 %)
[2025-04-20 05:02:24] 2025-04-20 09:01:30,235 | INFO     | right removable region: 832
[2025-04-20 05:02:24] 2025-04-20 09:01:30,236 | INFO     | sum of square deviations: 182477758316.49167
[2025-04-20 05:02:24] 2025-04-20 09:01:30,306 | INFO     | sum of deviations: 354800052368.00226
[2025-04-20 05:02:24] 2025-04-20 09:01:30,307 | INFO     | mean x: 1745114067.8639617
[2025-04-20 05:02:24] 2025-04-20 09:01:30,307 | INFO     | mean y: 2022732.8245823388
[2025-04-20 05:02:24] 2025-04-20 09:01:30,307 | INFO     | -- intersect: -3391084286.7847934
[2025-04-20 05:02:24] 2025-04-20 09:01:30,307 | INFO     | intersect: -3391084286.7847934
[2025-04-20 05:02:24] 2025-04-20 09:01:30,308 | INFO     | chi2: 9.37509416111014
[2025-04-20 05:02:24] 2025-04-20 09:01:30,308 | INFO     | current chi2=9.37509416111014 (change=28.598075488115533 %)
[2025-04-20 05:02:24] 2025-04-20 09:01:30,309 | INFO     | sum of square deviations: 179230855287.05676
[2025-04-20 05:02:24] 2025-04-20 09:01:30,404 | INFO     | sum of deviations: 202162434164.87396
[2025-04-20 05:02:24] 2025-04-20 09:01:30,404 | INFO     | mean x: 1745114220.364946
[2025-04-20 05:02:24] 2025-04-20 09:01:30,404 | INFO     | mean y: 2029900.8655462186
[2025-04-20 05:02:24] 2025-04-20 09:01:30,404 | INFO     | -- intersect: -1966361859.1340005
[2025-04-20 05:02:24] 2025-04-20 09:01:30,405 | INFO     | intersect: -1966361859.1340005
[2025-04-20 05:02:24] 2025-04-20 09:01:30,412 | INFO     | chi2: 7.605186193707482
[2025-04-20 05:02:24] 2025-04-20 09:01:30,412 | INFO     | current chi2=7.605186193707482 (change=18.87882870280501 %)
[2025-04-20 05:02:24] 2025-04-20 09:01:30,412 | INFO     | left removable region: 20
[2025-04-20 05:02:24] 2025-04-20 09:01:30,413 | INFO     | sum of square deviations: 166014393248.36847
[2025-04-20 05:02:24] 2025-04-20 09:01:30,503 | INFO     | sum of deviations: 182852622757.69113
[2025-04-20 05:02:24] 2025-04-20 09:01:30,503 | INFO     | mean x: 1745114189.8657637
[2025-04-20 05:02:24] 2025-04-20 09:01:30,503 | INFO     | mean y: 2051949.9421182266
[2025-04-20 05:02:24] 2025-04-20 09:01:30,503 | INFO     | -- intersect: -1920062755.8064706
[2025-04-20 05:02:24] 2025-04-20 09:01:30,503 | INFO     | intersect: -1920062755.8064706
[2025-04-20 05:02:24] 2025-04-20 09:01:30,504 | INFO     | chi2: 1.9617912193569311
[2025-04-20 05:02:24] 2025-04-20 09:01:30,504 | INFO     | -- intersect: -1920062755.8064706
[2025-04-20 05:02:24] 2025-04-20 09:01:30,505 | INFO     | current memory leak: 1.10 B/s (using 812 data points, chi2=1.96)
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | ..............................
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | . Timing measurements:
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | . get job = 1 s
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | . initial setup = 10 s
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | . payload setup = 65 s
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | . stage-in = 0 s
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | . payload execution = 51418 s
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | . stage-out = 9 s
[2025-04-20 05:02:24] 2025-04-20 09:01:30,506 | INFO     | . log creation = 1 s
[2025-04-20 05:02:24] 2025-04-20 09:01:30,507 | INFO     | ..............................
[2025-04-20 05:02:24] 2025-04-20 09:01:31,543 | INFO     | 
[2025-04-20 05:02:24] 2025-04-20 09:01:31,544 | INFO     | job summary report
[2025-04-20 05:02:24] 2025-04-20 09:01:31,544 | INFO     | --------------------------------------------------
[2025-04-20 05:02:24] 2025-04-20 09:01:31,544 | INFO     | PanDA job id: 6607874147
[2025-04-20 05:02:24] 2025-04-20 09:01:31,544 | INFO     | task id: 44075483
[2025-04-20 05:02:24] 2025-04-20 09:01:31,544 | INFO     | errors: (none)
[2025-04-20 05:02:24] 2025-04-20 09:01:31,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 05:02:24] 2025-04-20 09:01:31,544 | INFO     | pilot state: finished 
[2025-04-20 05:02:24] 2025-04-20 09:01:31,544 | INFO     | transexitcode: 0
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | exeerrorcode: 0
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | exeerrordiag: 
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | exitcode: 0
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | exitmsg: OK
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | cpuconsumptiontime: 46036 s
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | nevents: 400
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | neventsw: 0
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | pid: 3238670
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | pgrp: 3238670
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | corecount: 8
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | event service: False
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | sizes: {0: 2425996, 2: 2426681, 3: 2426681, 4: 2426709, 5: 2426709, 7: 2426936, 9: 2427092, 21: 2427120, 32: 2427148, 43: 2427176, 55: 2427350, 56: 2427718, 66: 24
[2025-04-20 05:02:24] 2025-04-20 09:01:31,545 | INFO     | --------------------------------------------------
[2025-04-20 05:02:24] 2025-04-20 09:01:31,546 | INFO     | 
[2025-04-20 05:02:24] 2025-04-20 09:01:31,546 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-20 05:02:24] 2025-04-20 09:01:31,999 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:31,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:31,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:31,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:31,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 05:02:24] 2025-04-20 09:01:32,000 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,001 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 05:02:24] 2025-04-20 09:01:32,001 | INFO     | job 6607874147 has completed (purged errors)
[2025-04-20 05:02:24] 2025-04-20 09:01:32,001 | INFO     | overall cleanup function is called
[2025-04-20 05:02:24] 2025-04-20 09:01:33,153 | INFO     | --- collectZombieJob: --- 10, [3238670]
[2025-04-20 05:02:24] 2025-04-20 09:01:33,153 | INFO     | zombie collector waiting for pid 3238670
[2025-04-20 05:02:24] 2025-04-20 09:01:33,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 05:02:24] 2025-04-20 09:01:33,154 | INFO     | collected zombie processes
[2025-04-20 05:02:24] 2025-04-20 09:01:33,154 | INFO     | will attempt to kill all subprocesses of pid=3238670
[2025-04-20 05:02:24] 2025-04-20 09:01:45,864 | INFO     | PID=3197297 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-20 05:02:24] 2025-04-20 09:01:45,865 | INFO     | .. there are 82 such processes running
[2025-04-20 05:02:24] 2025-04-20 09:01:45,887 | INFO     | process IDs to be killed: [3238670] (in reverse order)
[2025-04-20 05:02:24] 2025-04-20 09:01:46,294 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 05:02:24] 2025-04-20 09:01:46,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 05:02:24] 2025-04-20 09:01:46,387 | INFO     | did not find any defunct processes belonging to 3238670
[2025-04-20 05:02:24] 2025-04-20 09:01:46,496 | INFO     | did not find any defunct processes belonging to 3238670
[2025-04-20 05:02:24] 2025-04-20 09:01:46,496 | INFO     | ready for new job
[2025-04-20 05:02:24] 2025-04-20 09:01:46,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 05:02:24] 2025-04-20 09:01:46,509 | INFO     | **************************************
[2025-04-20 05:02:24] 2025-04-20 09:01:46,509 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 05:02:24] 2025-04-20 09:01:46,509 | INFO     | **************************************
[2025-04-20 05:02:24] 2025-04-20 09:01:46,509 | INFO     | 
[2025-04-20 05:02:24] 2025-04-20 09:01:46,535 | INFO     | architecture information:
[2025-04-20 05:02:24] 2025-04-20 09:01:46,553 | INFO     | executing command: cat /etc/os-release
[2025-04-20 05:02:24] 2025-04-20 09:01:46,634 | INFO     | cat /etc/os-release:
[2025-04-20 05:02:24] NAME="CentOS Linux"
[2025-04-20 05:02:24] VERSION="7 (Core)"
[2025-04-20 05:02:24] ID="centos"
[2025-04-20 05:02:24] ID_LIKE="rhel fedora"
[2025-04-20 05:02:24] VERSION_ID="7"
[2025-04-20 05:02:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 05:02:24] ANSI_COLOR="0;31"
[2025-04-20 05:02:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 05:02:24] HOME_URL="https://www.centos.org/"
[2025-04-20 05:02:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 05:02:24] 
[2025-04-20 05:02:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 05:02:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 05:02:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 05:02:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 05:02:24] 
[2025-04-20 05:02:24] 2025-04-20 09:01:46,635 | INFO     | **************************************
[2025-04-20 05:02:24] 2025-04-20 09:01:47,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-20 05:02:24] 2025-04-20 09:01:47,398 | INFO     | sufficient remaining disk space (74074554368 B)
[2025-04-20 05:02:24] 2025-04-20 09:01:47,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 05:02:24] 2025-04-20 09:01:47,398 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 05:02:24] 2025-04-20 09:01:47,398 | INFO     | update_server=False
[2025-04-20 05:02:24] 2025-04-20 09:01:47,399 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 05:02:24] 2025-04-20 09:01:47,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 05:02:24] 2025-04-20 09:01:47,411 | INFO     | aborting loop
[2025-04-20 05:02:24] 2025-04-20 09:01:47,872 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 05:02:24] 2025-04-20 09:01:47,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 05:02:24] 2025-04-20 09:01:47,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 05:02:24] 2025-04-20 09:01:47,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 05:02:24] 2025-04-20 09:01:48,245 | INFO     | all data control threads have been joined
[2025-04-20 05:02:24] 2025-04-20 09:01:48,247 | INFO     | all job control threads have been joined
[2025-04-20 05:02:24] 2025-04-20 09:01:48,404 | INFO     | [job] retrieve thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:48,417 | INFO     | [job] job monitor thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:48,691 | INFO     | [data] copytool_in thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:48,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 05:02:24] 2025-04-20 09:01:48,941 | INFO     | all payload control threads have been joined
[2025-04-20 05:02:24] 2025-04-20 09:01:49,179 | INFO     | [job] validate thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,181 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,183 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,253 | INFO     | [job] control thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,260 | INFO     | [data] control thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,446 | INFO     | [payload] failed_post thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,531 | INFO     | [payload] validate_post thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,558 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,562 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 05:02:24] 2025-04-20 09:01:49,930 | INFO     | [job] queue monitor thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,964 | INFO     | [payload] control thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:49,966 | INFO     | [data] copytool_out thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:53,728 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 05:02:24] 2025-04-20 09:01:54,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001629374272)>', '<ExcThread(monitor, started 140001144719104)>']
[2025-04-20 05:02:24] 2025-04-20 09:01:54,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 05:02:24] 2025-04-20 09:01:54,943 | INFO     | [monitor] control thread has ended
[2025-04-20 05:02:24] 2025-04-20 09:01:59,751 | INFO     | all workflow threads have been joined
[2025-04-20 05:02:24] 2025-04-20 09:01:59,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 05:02:24] 2025-04-20 09:01:59,752 | INFO     | traces error code: 0
[2025-04-20 05:02:24] 2025-04-20 09:01:59,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 05:02:24] 2025-04-20 09:02:01,859 [wrapper] ==== pilot stdout END ====
[2025-04-20 05:02:24] 2025-04-20 09:02:01,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 05:02:24] 2025-04-20 09:02:01,967 [wrapper] pilotpid: 3197297
[2025-04-20 05:02:24] 2025-04-20 09:02:02,001 [wrapper] Pilot exit status: 0
[2025-04-20 05:02:24] 2025-04-20 09:02:02,229 [wrapper] pandaids: 6607874147
[2025-04-20 05:02:24] 2025-04-20 09:02:03,526 [wrapper] cleanup supervisor_pilot 2945252 3197298
[2025-04-20 05:02:24] 2025-04-20 09:02:03,550 [wrapper] Test setup, not cleaning
[2025-04-20 05:02:24] 2025-04-20 09:02:03,579 [wrapper] apfmon messages muted
[2025-04-20 05:02:24] 2025-04-20 09:02:03,595 [wrapper] ==== wrapper stdout END ====
[2025-04-20 05:02:24] 2025-04-20 09:02:03,619 [wrapper] ==== wrapper stderr END ====
[2025-04-20 05:02:24]  *** Error codes and diagnostics ***
[2025-04-20 05:02:24]     "exeErrorCode": 0,
[2025-04-20 05:02:24]     "exeErrorDiag": "",
[2025-04-20 05:02:24]     "pilotErrorCode": 0,
[2025-04-20 05:02:24]     "pilotErrorDiag": "",
[2025-04-20 05:02:24]  *** Listing of results directory ***
[2025-04-20 05:02:24] total 422592
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 11:39 pilot3.tar.gz
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 11:47 queuedata.json
[2025-04-20 05:02:24] -rwx------. 1 boincer umatlas     37140 Apr 19 11:48 runpilot2-wrapper.sh
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas       100 Apr 19 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 05:02:24] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 14:38 run_atlas
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas       105 Apr 19 14:38 job.xml
[2025-04-20 05:02:24] -rw-r--r--. 2 boincer umatlas 223249670 Apr 19 14:38 EVNT.44075481._003294.pool.root.1
[2025-04-20 05:02:24] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 14:38 shared
[2025-04-20 05:02:24] -rw-r--r--. 2 boincer umatlas    508893 Apr 19 14:38 input.tar.gz
[2025-04-20 05:02:24] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 14:38 start_atlas.sh
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas         0 Apr 19 14:38 boinc_lockfile
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas      2579 Apr 19 14:38 pandaJob.out
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas       467 Apr 19 14:38 setup.sh.local
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas    991268 Apr 19 14:39 agis_schedconf.cvmfs.json
[2025-04-20 05:02:24] drwx------. 4 boincer umatlas      4096 Apr 19 14:40 pilot3
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas 198255345 Apr 20 04:55 HITS.44075483._084965.pool.root.1
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas       531 Apr 20 04:55 boinc_task_state.xml
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas      1042 Apr 20 05:00 memory_monitor_summary.json
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas   1618536 Apr 20 05:00 agis_ddmendpoints.agis.ALL.json
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas    639473 Apr 20 05:00 log.44075483._084965.job.log.tgz.1
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas      6855 Apr 20 05:00 init_data.xml
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas      7721 Apr 20 05:01 heartbeat.json
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas        95 Apr 20 05:01 pilot_heartbeat.json
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas      4353 Apr 20 05:01 pilotlog.txt
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas   3036174 Apr 20 05:02 log.44075483._084965.job.log.1
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas       357 Apr 20 05:02 output.list
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas       620 Apr 20 05:02 runtime_log
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas   3696640 Apr 20 05:02 result.tar.gz
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas     11409 Apr 20 05:02 runtime_log.err
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas       656 Apr 20 05:02 q3ZLDmNbPQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNi6KDmS8MAWo.diag
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas        28 Apr 20 05:02 wrapper_checkpoint.txt
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas      8192 Apr 20 05:02 boinc_mmap_file
[2025-04-20 05:02:24] -rw-r--r--. 1 boincer umatlas     21057 Apr 20 05:02 stderr.txt
[2025-04-20 05:02:24] HITS file was successfully produced:
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas 198255345 Apr 20 04:55 shared/HITS.pool.root.1
[2025-04-20 05:02:24]  *** Contents of shared directory: ***
[2025-04-20 05:02:24] total 415772
[2025-04-20 05:02:24] -rw-r--r--. 2 boincer umatlas 223249670 Apr 19 14:38 ATLAS.root_0
[2025-04-20 05:02:24] -rw-r--r--. 2 boincer umatlas    508893 Apr 19 14:38 input.tar.gz
[2025-04-20 05:02:24] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 14:38 start_atlas.sh
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas 198255345 Apr 20 04:55 HITS.pool.root.1
[2025-04-20 05:02:24] -rw-------. 1 boincer umatlas   3696640 Apr 20 05:02 result.tar.gz
05:02:26 (3180506): run_atlas exited; CPU time 48868.933383
05:02:26 (3180506): called boinc_finish(0)

</stderr_txt>
]]>

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