Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:23:20 (124944): wrapper (7.7.26015): starting
22:23:20 (124944): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 22:23:20] Arguments: --nthreads 12
[2025-04-19 22:23:20] Threads: 12
[2025-04-19 22:23:20] Checking for CVMFS
[2025-04-19 22:23:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 22:23:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 22:23:20] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 22:23:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 22:23:21] 2.12.7.0 3563 201 56816 145050 3 56 3439485 4096001 0 130560 0 288498 99.962 168814 1370 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-19 22:23:21] CVMFS is ok
[2025-04-19 22:23:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 22:23:21] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-19 22:23:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-19 22:23:21] Further information can be found at the LHC@home message board.
[2025-04-19 22:23:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 22:23:21] Checking for apptainer binary...
[2025-04-19 22:23:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 22:23:21] Running /usr/bin/apptainer --version
[2025-04-19 22:23:21] apptainer version 1.3.6
[2025-04-19 22:23:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 22:23:21] subzero
[2025-04-19 22:23:21] apptainer works
[2025-04-19 22:23:21] Set ATHENA_PROC_NUMBER=12
[2025-04-19 22:23:21] Set ATHENA_CORE_NUMBER=12
[2025-04-19 22:23:21] Starting ATLAS job with PandaID=6607872182
[2025-04-19 22:23:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/david/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 23:09:01]  *** The last 200 lines of the pilot log: ***
[2025-04-19 23:09:01]  filetype=log
[2025-04-19 23:09:01]  guid=4d60b167-d2fe-4a8a-a8a6-b829f6ac0afb
[2025-04-19 23:09:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 23:09:01]  is_altstaged=None
[2025-04-19 23:09:01]  is_tar=False
[2025-04-19 23:09:01]  lfn=log.44075483._084627.job.log.tgz.1
[2025-04-19 23:09:01]  mtime=0
[2025-04-19 23:09:01]  protocol_id=None
[2025-04-19 23:09:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 23:09:01]  replicas=None
[2025-04-19 23:09:01]  scope=mc23_13p6TeV
[2025-04-19 23:09:01]  status=None
[2025-04-19 23:09:01]  status_code=0
[2025-04-19 23:09:01]  storage_token=
[2025-04-19 23:09:01]  surl=/home/david/boinc/slots/0/PanDA_Pilot-6607872182/log.44075483._084627.job.log.tgz.1
[2025-04-19 23:09:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/88/log.44075483._084627.job.log.tgz.1
[2025-04-19 23:09:01]  workdir=None
[2025-04-19 23:09:01] ]
[2025-04-19 23:09:01] 2025-04-19 21:08:35,435 | INFO     | transferring file log.44075483._084627.job.log.tgz.1 from /home/david/boinc/slots/0/PanDA_Pilot-6607872182/log.44075483._084627.job.log.tgz.1 to /home/david/boinc/
[2025-04-19 23:09:01] 2025-04-19 21:08:35,435 | INFO     | executing command: /usr/bin/env mv /home/david/boinc/slots/0/PanDA_Pilot-6607872182/log.44075483._084627.job.log.tgz.1 /home/david/boinc/slots/0/log.44075483._0846
[2025-04-19 23:09:01] 2025-04-19 21:08:35,443 | INFO     | adding to output.list: log.44075483._084627.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/88/log.44075483._084627.job.log.tg
[2025-04-19 23:09:01] 2025-04-19 21:08:35,444 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 23:09:01] 2025-04-19 21:08:35,444 | INFO     | summary of transferred files:
[2025-04-19 23:09:01] 2025-04-19 21:08:35,444 | INFO     |  -- lfn=log.44075483._084627.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 23:09:01] 2025-04-19 21:08:35,444 | INFO     | stage-out finished correctly
[2025-04-19 23:09:01] 2025-04-19 21:08:37,501 | INFO     | monitor loop #208: job 0:6607872182 is in state 'finished'
[2025-04-19 23:09:01] 2025-04-19 21:08:37,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:09:01] 2025-04-19 21:08:38,814 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 23:09:01] 2025-04-19 21:08:39,453 | INFO     | job 6607872182 has state=finished
[2025-04-19 23:09:01] 2025-04-19 21:08:39,453 | INFO     | preparing for final server update for job 6607872182 in state='finished'
[2025-04-19 23:09:01] 2025-04-19 21:08:39,454 | INFO     | this job has now completed (state=finished)
[2025-04-19 23:09:01] 2025-04-19 21:08:39,454 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 23:09:01] 2025-04-19 21:08:39,454 | INFO     | log transfer has been attempted: DONE
[2025-04-19 23:09:01] 2025-04-19 21:08:39,454 | INFO     | job 6607872182 has finished - writing final server update
[2025-04-19 23:09:01] 2025-04-19 21:08:39,454 | INFO     | total number of processed events: 400 (read)
[2025-04-19 23:09:01] 2025-04-19 21:08:39,455 | INFO     | executing command: lscpu
[2025-04-19 23:09:01] 2025-04-19 21:08:39,470 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 23:09:01] 2025-04-19 21:08:40,004 | INFO     | monitor loop #209: job 0:6607872182 is in state 'finished'
[2025-04-19 23:09:01] 2025-04-19 21:08:40,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:09:01] 2025-04-19 21:08:41,292 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 23:09:01] 2025-04-19 21:08:41,292 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6607872182/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 23:09:01] 2025-04-19 21:08:41,292 | INFO     | extracted standard info from prmon json
[2025-04-19 23:09:01] 2025-04-19 21:08:41,292 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 23:09:01] 2025-04-19 21:08:41,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 23:09:01] 2025-04-19 21:08:41,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 23:09:01] 2025-04-19 21:08:41,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 23:09:01] 2025-04-19 21:08:41,293 | INFO     | fitting pss+swap vs Time
[2025-04-19 23:09:01] 2025-04-19 21:08:41,293 | INFO     | sum of square deviations: 17003109.5
[2025-04-19 23:09:01] 2025-04-19 21:08:41,293 | INFO     | sum of deviations: 10088451785.5
[2025-04-19 23:09:01] 2025-04-19 21:08:41,293 | INFO     | mean x: 1745095657.5
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | mean y: 2860658.5
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | -- intersect: -1035414420032.0802
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | intersect: -1035414420032.0802
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | chi2: 1.1652783486954625
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | -- intersect: -1035414420032.0802
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | current memory leak: 593.33 B/s (using 38 data points, chi2=1.17)
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | ..............................
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | . Timing measurements:
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | . get job = 0 s
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | . initial setup = 1 s
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | . payload setup = 2 s
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | . stage-in = 0 s
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | . payload execution = 2690 s
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | . stage-out = 0 s
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | . log creation = 0 s
[2025-04-19 23:09:01] 2025-04-19 21:08:41,294 | INFO     | ..............................
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | 
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | job summary report
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | --------------------------------------------------
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | PanDA job id: 6607872182
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | task id: 44075483
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | errors: (none)
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | pilot state: finished 
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | transexitcode: 0
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | exeerrorcode: 0
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | exeerrordiag: 
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | exitcode: 0
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | exitmsg: OK
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | cpuconsumptiontime: 23565 s
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | nevents: 400
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | neventsw: 0
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | pid: 135197
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | pgrp: 135197
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | corecount: 12
[2025-04-19 23:09:01] 2025-04-19 21:08:41,334 | INFO     | event service: False
[2025-04-19 23:09:01] 2025-04-19 21:08:41,335 | INFO     | sizes: {0: 2426827, 2: 2427033, 11: 2427061, 2696: 2461310, 2700: 2461310, 2702: 2461480}
[2025-04-19 23:09:01] 2025-04-19 21:08:41,335 | INFO     | --------------------------------------------------
[2025-04-19 23:09:01] 2025-04-19 21:08:41,335 | INFO     | 
[2025-04-19 23:09:01] 2025-04-19 21:08:41,335 | INFO     | executing command: ls -lF /home/david/boinc/slots/0
[2025-04-19 23:09:01] 2025-04-19 21:08:41,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 23:09:01] 2025-04-19 21:08:41,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 23:09:01] 2025-04-19 21:08:41,346 | INFO     | job 6607872182 has completed (purged errors)
[2025-04-19 23:09:01] 2025-04-19 21:08:41,346 | INFO     | overall cleanup function is called
[2025-04-19 23:09:01] 2025-04-19 21:08:42,350 | INFO     | --- collectZombieJob: --- 10, [135197]
[2025-04-19 23:09:01] 2025-04-19 21:08:42,350 | INFO     | zombie collector waiting for pid 135197
[2025-04-19 23:09:01] 2025-04-19 21:08:42,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 23:09:01] 2025-04-19 21:08:42,350 | INFO     | collected zombie processes
[2025-04-19 23:09:01] 2025-04-19 21:08:42,350 | INFO     | will attempt to kill all subprocesses of pid=135197
[2025-04-19 23:09:01] 2025-04-19 21:08:42,427 | INFO     | process IDs to be killed: [135197] (in reverse order)
[2025-04-19 23:09:01] 2025-04-19 21:08:42,453 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 23:09:01] 2025-04-19 21:08:42,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 23:09:01] 2025-04-19 21:08:42,455 | INFO     | did not find any defunct processes belonging to 135197
[2025-04-19 23:09:01] 2025-04-19 21:08:42,456 | INFO     | did not find any defunct processes belonging to 135197
[2025-04-19 23:09:01] 2025-04-19 21:08:42,456 | INFO     | ready for new job
[2025-04-19 23:09:01] 2025-04-19 21:08:42,456 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 23:09:01] 2025-04-19 21:08:42,457 | INFO     | **************************************
[2025-04-19 23:09:01] 2025-04-19 21:08:42,457 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 23:09:01] 2025-04-19 21:08:42,457 | INFO     | **************************************
[2025-04-19 23:09:01] 2025-04-19 21:08:42,457 | INFO     | 
[2025-04-19 23:09:01] 2025-04-19 21:08:42,458 | INFO     | architecture information:
[2025-04-19 23:09:01] 2025-04-19 21:08:42,458 | INFO     | executing command: cat /etc/os-release
[2025-04-19 23:09:01] 2025-04-19 21:08:42,465 | INFO     | cat /etc/os-release:
[2025-04-19 23:09:01] NAME="CentOS Linux"
[2025-04-19 23:09:01] VERSION="7 (Core)"
[2025-04-19 23:09:01] ID="centos"
[2025-04-19 23:09:01] ID_LIKE="rhel fedora"
[2025-04-19 23:09:01] VERSION_ID="7"
[2025-04-19 23:09:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 23:09:01] ANSI_COLOR="0;31"
[2025-04-19 23:09:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 23:09:01] HOME_URL="https://www.centos.org/"
[2025-04-19 23:09:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 23:09:01] 
[2025-04-19 23:09:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 23:09:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 23:09:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 23:09:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 23:09:01] 
[2025-04-19 23:09:01] 2025-04-19 21:08:42,465 | INFO     | **************************************
[2025-04-19 23:09:01] 2025-04-19 21:08:42,968 | INFO     | executing command: df -mP /home/david/boinc/slots/0
[2025-04-19 23:09:01] 2025-04-19 21:08:42,976 | INFO     | sufficient remaining disk space (238781726720 B)
[2025-04-19 23:09:01] 2025-04-19 21:08:42,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 23:09:01] 2025-04-19 21:08:42,976 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 23:09:01] 2025-04-19 21:08:42,976 | INFO     | update_server=False
[2025-04-19 23:09:01] 2025-04-19 21:08:42,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 23:09:01] 2025-04-19 21:08:42,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:09:01] 2025-04-19 21:08:42,976 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 23:09:01] 2025-04-19 21:08:42,977 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 23:09:01] 2025-04-19 21:08:42,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 23:09:01] 2025-04-19 21:08:42,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 23:09:01] 2025-04-19 21:08:43,421 | INFO     | all data control threads have been joined
[2025-04-19 23:09:01] 2025-04-19 21:08:43,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 23:09:01] 2025-04-19 21:08:43,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:09:01] 2025-04-19 21:08:43,511 | INFO     | aborting loop
[2025-04-19 23:09:01] 2025-04-19 21:08:43,535 | INFO     | all job control threads have been joined
[2025-04-19 23:09:01] 2025-04-19 21:08:43,826 | INFO     | all payload control threads have been joined
[2025-04-19 23:09:01] 2025-04-19 21:08:43,981 | INFO     | [job] retrieve thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:43,981 | INFO     | [job] queue monitor thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,125 | INFO     | [payload] validate_post thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,426 | INFO     | [data] control thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,514 | INFO     | [job] job monitor thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,540 | INFO     | [job] control thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,790 | INFO     | [payload] failed_post thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,831 | INFO     | [payload] control thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,839 | INFO     | [job] validate thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 23:09:01] 2025-04-19 21:08:44,934 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:44,984 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:45,086 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:45,417 | INFO     | [data] copytool_in thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:45,495 | INFO     | [data] copytool_out thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:48,857 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:53,791 | INFO     | job.realtimelogging is not enabled
[2025-04-19 23:09:01] 2025-04-19 21:08:54,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 23:09:01] 2025-04-19 21:08:56,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697315989312)>', '<ExcThread(monitor, started 139696696981248)>']
[2025-04-19 23:09:01] 2025-04-19 21:08:57,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 23:09:01] 2025-04-19 21:08:57,031 | INFO     | [monitor] control thread has ended
[2025-04-19 23:09:01] 2025-04-19 21:09:01,405 | INFO     | all workflow threads have been joined
[2025-04-19 23:09:01] 2025-04-19 21:09:01,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 23:09:01] 2025-04-19 21:09:01,405 | INFO     | traces error code: 0
[2025-04-19 23:09:01] 2025-04-19 21:09:01,405 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 23:09:01] 2025-04-19 21:09:01,450 [wrapper] ==== pilot stdout END ====
[2025-04-19 23:09:01] 2025-04-19 21:09:01,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 23:09:01] 2025-04-19 21:09:01,453 [wrapper] pilotpid: 128634
[2025-04-19 23:09:01] 2025-04-19 21:09:01,454 [wrapper] Pilot exit status: 0
[2025-04-19 23:09:01] 2025-04-19 21:09:01,459 [wrapper] pandaids: 6607872182
[2025-04-19 23:09:01] 2025-04-19 21:09:01,476 [wrapper] cleanup supervisor_pilot  147868 128635
[2025-04-19 23:09:01] 2025-04-19 21:09:01,477 [wrapper] Test setup, not cleaning
[2025-04-19 23:09:01] 2025-04-19 21:09:01,479 [wrapper] apfmon messages muted
[2025-04-19 23:09:01] 2025-04-19 21:09:01,480 [wrapper] ==== wrapper stdout END ====
[2025-04-19 23:09:01] 2025-04-19 21:09:01,482 [wrapper] ==== wrapper stderr END ====
[2025-04-19 23:09:01]  *** Error codes and diagnostics ***
[2025-04-19 23:09:01]     "exeErrorCode": 0,
[2025-04-19 23:09:01]     "exeErrorDiag": "",
[2025-04-19 23:09:01]     "pilotErrorCode": 0,
[2025-04-19 23:09:01]     "pilotErrorDiag": "",
[2025-04-19 23:09:01]  *** Listing of results directory ***
[2025-04-19 23:09:01] total 410228
[2025-04-19 23:09:01] -rw-r--r-- 1 david david    495897 Apr 19 16:33 pilot3.tar.gz
[2025-04-19 23:09:01] -rw-r--r-- 1 david david      5111 Apr 19 17:17 queuedata.json
[2025-04-19 23:09:01] -rwx------ 1 david david     37140 Apr 19 17:17 runpilot2-wrapper.sh
[2025-04-19 23:09:01] -rw-r--r-- 1 david david       100 Apr 19 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 23:09:01] -rwxr-xr-x 1 david david      7986 Apr 19 22:23 run_atlas
[2025-04-19 23:09:01] -rw-r--r-- 1 david david       105 Apr 19 22:23 job.xml
[2025-04-19 23:09:01] -rw-r--r-- 2 david david     17569 Apr 19 22:23 start_atlas.sh
[2025-04-19 23:09:01] drwxrwx--x 1 david david        76 Apr 19 22:23 shared
[2025-04-19 23:09:01] -rw-r--r-- 2 david david    508895 Apr 19 22:23 input.tar.gz
[2025-04-19 23:09:01] -rw-r--r-- 1 david david      7526 Apr 19 22:23 init_data.xml
[2025-04-19 23:09:01] -rw-r--r-- 2 david david 224457950 Apr 19 22:23 EVNT.44075481._003280.pool.root.1
[2025-04-19 23:09:01] -rw-r--r-- 1 david david         0 Apr 19 22:23 boinc_setup_complete
[2025-04-19 23:09:01] -rw-r--r-- 1 david david         0 Apr 19 22:23 boinc_lockfile
[2025-04-19 23:09:01] -rw-r--r-- 1 david david      2579 Apr 19 22:23 pandaJob.out
[2025-04-19 23:09:01] -rw------- 1 david david       424 Apr 19 22:23 setup.sh.local
[2025-04-19 23:09:01] -rw------- 1 david david    991284 Apr 19 22:23 agis_schedconf.cvmfs.json
[2025-04-19 23:09:01] -rw------- 1 david david   1618536 Apr 19 22:23 agis_ddmendpoints.agis.ALL.json
[2025-04-19 23:09:01] drwx------ 1 david david       368 Apr 19 22:23 pilot3
[2025-04-19 23:09:01] -rw------- 1 david david        95 Apr 19 23:07 pilot_heartbeat.json
[2025-04-19 23:09:01] -rw-r--r-- 1 david david       529 Apr 19 23:08 boinc_task_state.xml
[2025-04-19 23:09:01] -rw------- 1 david david 190472869 Apr 19 23:08 HITS.44075483._084627.pool.root.1
[2025-04-19 23:09:01] -rw------- 1 david david      1017 Apr 19 23:08 memory_monitor_summary.json
[2025-04-19 23:09:01] -rw------- 1 david david    355885 Apr 19 23:08 log.44075483._084627.job.log.tgz.1
[2025-04-19 23:09:01] -rw-r--r-- 1 david david      8192 Apr 19 23:08 boinc_mmap_file
[2025-04-19 23:09:01] -rw-r--r-- 1 david david        27 Apr 19 23:08 wrapper_checkpoint.txt
[2025-04-19 23:09:01] -rw------- 1 david david      7658 Apr 19 23:08 heartbeat.json
[2025-04-19 23:09:01] -rw------- 1 david david      4552 Apr 19 23:09 pilotlog.txt
[2025-04-19 23:09:01] -rw------- 1 david david    290673 Apr 19 23:09 log.44075483._084627.job.log.1
[2025-04-19 23:09:01] -rw------- 1 david david       357 Apr 19 23:09 output.list
[2025-04-19 23:09:01] -rw-r--r-- 1 david david       620 Apr 19 23:09 runtime_log
[2025-04-19 23:09:01] -rw------- 1 david david    665600 Apr 19 23:09 result.tar.gz
[2025-04-19 23:09:01] -rw-r--r-- 1 david david     11014 Apr 19 23:09 runtime_log.err
[2025-04-19 23:09:01] -rw------- 1 david david       638 Apr 19 23:09 fOSKDmF8OQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDFiLDmuqJZyn.diag
[2025-04-19 23:09:01] -rw-r--r-- 1 david david     21227 Apr 19 23:09 stderr.txt
[2025-04-19 23:09:01] HITS file was successfully produced:
[2025-04-19 23:09:01] -rw------- 1 david david 190472869 Apr 19 23:08 shared/HITS.pool.root.1
[2025-04-19 23:09:01]  *** Contents of shared directory: ***
[2025-04-19 23:09:01] total 406384
[2025-04-19 23:09:01] -rw-r--r-- 2 david david     17569 Apr 19 22:23 start_atlas.sh
[2025-04-19 23:09:01] -rw-r--r-- 2 david david    508895 Apr 19 22:23 input.tar.gz
[2025-04-19 23:09:01] -rw-r--r-- 2 david david 224457950 Apr 19 22:23 ATLAS.root_0
[2025-04-19 23:09:01] -rw------- 1 david david 190472869 Apr 19 23:08 HITS.pool.root.1
[2025-04-19 23:09:01] -rw------- 1 david david    665600 Apr 19 23:09 result.tar.gz
23:09:03 (124944): run_atlas exited; CPU time 23586.457545
23:09:03 (124944): called boinc_finish(0)

</stderr_txt>
]]>

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