Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:09:06 (150062): wrapper (7.7.26015): starting
23:09:06 (150062): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 23:09:06] Arguments: --nthreads 12
[2025-04-19 23:09:06] Threads: 12
[2025-04-19 23:09:06] Checking for CVMFS
[2025-04-19 23:09:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 23:09:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 23:09:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 23:09:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 23:09:07] 2.12.7.0 3563 247 61100 145050 1 187 3439638 4096000 0 130560 0 346942 99.968 168825 1359 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-19 23:09:07] CVMFS is ok
[2025-04-19 23:09:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 23:09:07] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-19 23:09:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-19 23:09:07] Further information can be found at the LHC@home message board.
[2025-04-19 23:09:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 23:09:07] Checking for apptainer binary...
[2025-04-19 23:09:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 23:09:07] Running /usr/bin/apptainer --version
[2025-04-19 23:09:07] apptainer version 1.3.6
[2025-04-19 23:09:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 23:09:07] subzero
[2025-04-19 23:09:07] apptainer works
[2025-04-19 23:09:07] Set ATHENA_PROC_NUMBER=12
[2025-04-19 23:09:07] Set ATHENA_CORE_NUMBER=12
[2025-04-19 23:09:07] Starting ATLAS job with PandaID=6607872174
[2025-04-19 23:09:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/david/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 23:57:24]  *** The last 200 lines of the pilot log: ***
[2025-04-19 23:57:24]  storage_token=
[2025-04-19 23:57:24]  surl=/home/david/boinc/slots/0/PanDA_Pilot-6607872174/log.44075483._084619.job.log.tgz.1
[2025-04-19 23:57:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/01/log.44075483._084619.job.log.tgz.1
[2025-04-19 23:57:24]  workdir=None
[2025-04-19 23:57:24] ]
[2025-04-19 23:57:24] 2025-04-19 21:57:01,723 | INFO     | transferring file log.44075483._084619.job.log.tgz.1 from /home/david/boinc/slots/0/PanDA_Pilot-6607872174/log.44075483._084619.job.log.tgz.1 to /home/david/boinc/
[2025-04-19 23:57:24] 2025-04-19 21:57:01,723 | INFO     | executing command: /usr/bin/env mv /home/david/boinc/slots/0/PanDA_Pilot-6607872174/log.44075483._084619.job.log.tgz.1 /home/david/boinc/slots/0/log.44075483._0846
[2025-04-19 23:57:24] 2025-04-19 21:57:01,732 | INFO     | adding to output.list: log.44075483._084619.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/01/log.44075483._084619.job.log.tg
[2025-04-19 23:57:24] 2025-04-19 21:57:01,733 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 23:57:24] 2025-04-19 21:57:01,733 | INFO     | summary of transferred files:
[2025-04-19 23:57:24] 2025-04-19 21:57:01,733 | INFO     |  -- lfn=log.44075483._084619.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 23:57:24] 2025-04-19 21:57:01,733 | INFO     | stage-out finished correctly
[2025-04-19 23:57:24] 2025-04-19 21:57:01,839 | WARNING  | process 160318 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 23:57:24] 2025-04-19 21:57:01,839 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6607872174/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 23:57:24] 2025-04-19 21:57:01,839 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6607872174/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 23:57:24] 2025-04-19 21:57:01,840 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4239864 B
[2025-04-19 23:57:24] 2025-04-19 21:57:01,840 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15797 B
[2025-04-19 23:57:24] 2025-04-19 21:57:01,840 | INFO     | executing command: df -mP /home/david/boinc/slots/0
[2025-04-19 23:57:24] 2025-04-19 21:57:01,848 | INFO     | sufficient remaining disk space (238621294592 B)
[2025-04-19 23:57:24] 2025-04-19 21:57:01,848 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-19 23:57:24] 2025-04-19 21:57:01,849 | INFO     | size of work directory /home/david/boinc/slots/0/PanDA_Pilot-6607872174: 4529553 B (within 2537553920 B limit)
[2025-04-19 23:57:24] 2025-04-19 21:57:01,849 | INFO     | pfn file=/home/david/boinc/slots/0/PanDA_Pilot-6607872174/HITS.44075483._084619.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-19 23:57:24] 2025-04-19 21:57:01,849 | INFO     | total size of present files: 0 B (workdir size: 4529553 B)
[2025-04-19 23:57:24] 2025-04-19 21:57:01,849 | INFO     | output file size check: skipping output file /home/david/boinc/slots/0/PanDA_Pilot-6607872174/HITS.44075483._084619.pool.root.1 since it does not exist
[2025-04-19 23:57:24] 2025-04-19 21:57:01,923 | INFO     | number of running child processes to parent process 160318: 1
[2025-04-19 23:57:24] 2025-04-19 21:57:01,923 | INFO     | maximum number of monitored processes: 6
[2025-04-19 23:57:24] 2025-04-19 21:57:02,619 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 23:57:24] 2025-04-19 21:57:02,659 | INFO     | job 6607872174 has state=finished
[2025-04-19 23:57:24] 2025-04-19 21:57:02,659 | INFO     | preparing for final server update for job 6607872174 in state='finished'
[2025-04-19 23:57:24] 2025-04-19 21:57:02,660 | INFO     | this job has now completed (state=finished)
[2025-04-19 23:57:24] 2025-04-19 21:57:02,660 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 23:57:24] 2025-04-19 21:57:02,660 | INFO     | log transfer has been attempted: DONE
[2025-04-19 23:57:24] 2025-04-19 21:57:02,660 | INFO     | job 6607872174 has finished - writing final server update
[2025-04-19 23:57:24] 2025-04-19 21:57:02,660 | INFO     | total number of processed events: 400 (read)
[2025-04-19 23:57:24] 2025-04-19 21:57:02,661 | INFO     | executing command: lscpu
[2025-04-19 23:57:24] 2025-04-19 21:57:02,676 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 23:57:24] 2025-04-19 21:57:04,424 | INFO     | monitor loop #220: job 0:6607872174 is in state 'finished'
[2025-04-19 23:57:24] 2025-04-19 21:57:04,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:57:24] 2025-04-19 21:57:04,858 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 23:57:24] 2025-04-19 21:57:04,859 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6607872174/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 23:57:24] 2025-04-19 21:57:04,859 | INFO     | extracted standard info from prmon json
[2025-04-19 23:57:24] 2025-04-19 21:57:04,859 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 23:57:24] 2025-04-19 21:57:04,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 23:57:24] 2025-04-19 21:57:04,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 23:57:24] 2025-04-19 21:57:04,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 23:57:24] 2025-04-19 21:57:04,860 | INFO     | fitting pss+swap vs Time
[2025-04-19 23:57:24] 2025-04-19 21:57:04,860 | INFO     | sum of square deviations: 19832930.0
[2025-04-19 23:57:24] 2025-04-19 21:57:04,860 | INFO     | sum of deviations: 11036723656.000002
[2025-04-19 23:57:24] 2025-04-19 21:57:04,860 | INFO     | mean x: 1745098464.5
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | mean y: 2606987.7
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | -- intersect: -971118125309.3651
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | intersect: -971118125309.3651
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | chi2: 1.5975145168939886
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | -- intersect: -971118125309.3651
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | current memory leak: 556.48 B/s (using 40 data points, chi2=1.60)
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | ..............................
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | . Timing measurements:
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | . get job = 0 s
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | . initial setup = 1 s
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | . payload setup = 2 s
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | . stage-in = 0 s
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | . payload execution = 2850 s
[2025-04-19 23:57:24] 2025-04-19 21:57:04,861 | INFO     | . stage-out = 0 s
[2025-04-19 23:57:24] 2025-04-19 21:57:04,862 | INFO     | . log creation = 0 s
[2025-04-19 23:57:24] 2025-04-19 21:57:04,862 | INFO     | ..............................
[2025-04-19 23:57:24] 2025-04-19 21:57:04,900 | INFO     | 
[2025-04-19 23:57:24] 2025-04-19 21:57:04,900 | INFO     | job summary report
[2025-04-19 23:57:24] 2025-04-19 21:57:04,900 | INFO     | --------------------------------------------------
[2025-04-19 23:57:24] 2025-04-19 21:57:04,900 | INFO     | PanDA job id: 6607872174
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | task id: 44075483
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | errors: (none)
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | pilot state: finished 
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | transexitcode: 0
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | exeerrorcode: 0
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | exeerrordiag: 
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | exitcode: 0
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | exitmsg: OK
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | cpuconsumptiontime: 24366 s
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | nevents: 400
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | neventsw: 0
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | pid: 160318
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | pgrp: 160318
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | corecount: 12
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | event service: False
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | sizes: {0: 2425996, 1: 2426855, 3: 2427061, 11: 2427089, 2856: 2452419, 2857: 2461366, 2858: 2461578, 2860: 2461748}
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | --------------------------------------------------
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | 
[2025-04-19 23:57:24] 2025-04-19 21:57:04,901 | INFO     | executing command: ls -lF /home/david/boinc/slots/0
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | job 6607872174 has completed (purged errors)
[2025-04-19 23:57:24] 2025-04-19 21:57:04,912 | INFO     | overall cleanup function is called
[2025-04-19 23:57:24] 2025-04-19 21:57:05,919 | INFO     | --- collectZombieJob: --- 10, [160318]
[2025-04-19 23:57:24] 2025-04-19 21:57:05,919 | INFO     | zombie collector waiting for pid 160318
[2025-04-19 23:57:24] 2025-04-19 21:57:05,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 23:57:24] 2025-04-19 21:57:05,920 | INFO     | collected zombie processes
[2025-04-19 23:57:24] 2025-04-19 21:57:05,920 | INFO     | will attempt to kill all subprocesses of pid=160318
[2025-04-19 23:57:24] 2025-04-19 21:57:05,996 | INFO     | process IDs to be killed: [160318] (in reverse order)
[2025-04-19 23:57:24] 2025-04-19 21:57:06,021 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 23:57:24] 2025-04-19 21:57:06,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 23:57:24] 2025-04-19 21:57:06,023 | INFO     | did not find any defunct processes belonging to 160318
[2025-04-19 23:57:24] 2025-04-19 21:57:06,025 | INFO     | did not find any defunct processes belonging to 160318
[2025-04-19 23:57:24] 2025-04-19 21:57:06,025 | INFO     | ready for new job
[2025-04-19 23:57:24] 2025-04-19 21:57:06,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 23:57:24] 2025-04-19 21:57:06,026 | INFO     | **************************************
[2025-04-19 23:57:24] 2025-04-19 21:57:06,026 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 23:57:24] 2025-04-19 21:57:06,026 | INFO     | **************************************
[2025-04-19 23:57:24] 2025-04-19 21:57:06,026 | INFO     | 
[2025-04-19 23:57:24] 2025-04-19 21:57:06,026 | INFO     | architecture information:
[2025-04-19 23:57:24] 2025-04-19 21:57:06,027 | INFO     | executing command: cat /etc/os-release
[2025-04-19 23:57:24] 2025-04-19 21:57:06,034 | INFO     | cat /etc/os-release:
[2025-04-19 23:57:24] NAME="CentOS Linux"
[2025-04-19 23:57:24] VERSION="7 (Core)"
[2025-04-19 23:57:24] ID="centos"
[2025-04-19 23:57:24] ID_LIKE="rhel fedora"
[2025-04-19 23:57:24] VERSION_ID="7"
[2025-04-19 23:57:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 23:57:24] ANSI_COLOR="0;31"
[2025-04-19 23:57:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 23:57:24] HOME_URL="https://www.centos.org/"
[2025-04-19 23:57:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 23:57:24] 
[2025-04-19 23:57:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 23:57:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 23:57:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 23:57:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 23:57:24] 
[2025-04-19 23:57:24] 2025-04-19 21:57:06,034 | INFO     | **************************************
[2025-04-19 23:57:24] 2025-04-19 21:57:06,537 | INFO     | executing command: df -mP /home/david/boinc/slots/0
[2025-04-19 23:57:24] 2025-04-19 21:57:06,544 | INFO     | sufficient remaining disk space (238623391744 B)
[2025-04-19 23:57:24] 2025-04-19 21:57:06,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 23:57:24] 2025-04-19 21:57:06,545 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 23:57:24] 2025-04-19 21:57:06,545 | INFO     | update_server=False
[2025-04-19 23:57:24] 2025-04-19 21:57:06,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 23:57:24] 2025-04-19 21:57:06,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:57:24] 2025-04-19 21:57:06,595 | INFO     | all payload control threads have been joined
[2025-04-19 23:57:24] 2025-04-19 21:57:06,855 | INFO     | all job control threads have been joined
[2025-04-19 23:57:24] 2025-04-19 21:57:06,927 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 23:57:24] 2025-04-19 21:57:06,927 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 23:57:24] 2025-04-19 21:57:06,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:57:24] 2025-04-19 21:57:06,927 | INFO     | will abort loop
[2025-04-19 23:57:24] 2025-04-19 21:57:07,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 23:57:24] 2025-04-19 21:57:07,492 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 23:57:24] 2025-04-19 21:57:07,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 23:57:24] 2025-04-19 21:57:07,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 23:57:24] 2025-04-19 21:57:07,550 | INFO     | [job] retrieve thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:07,550 | INFO     | [job] queue monitor thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:07,600 | INFO     | [payload] control thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:07,605 | INFO     | all data control threads have been joined
[2025-04-19 23:57:24] 2025-04-19 21:57:07,848 | INFO     | [data] copytool_in thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:07,861 | INFO     | [job] control thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:07,932 | INFO     | [job] job monitor thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:08,162 | INFO     | [payload] failed_post thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:08,368 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:08,610 | INFO     | [data] control thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:08,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 23:57:24] 2025-04-19 21:57:08,730 | INFO     | [job] validate thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:08,805 | INFO     | [payload] validate_post thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:08,940 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:08,947 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:09,280 | INFO     | [data] copytool_out thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:12,670 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:17,035 | INFO     | job.realtimelogging is not enabled
[2025-04-19 23:57:24] 2025-04-19 21:57:18,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 23:57:24] 2025-04-19 21:57:19,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706011215680)>', '<ExcThread(monitor, started 139705018480384)>']
[2025-04-19 23:57:24] 2025-04-19 21:57:19,542 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 23:57:24] 2025-04-19 21:57:19,542 | INFO     | [monitor] control thread has ended
[2025-04-19 23:57:24] 2025-04-19 21:57:24,198 | INFO     | all workflow threads have been joined
[2025-04-19 23:57:24] 2025-04-19 21:57:24,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 23:57:24] 2025-04-19 21:57:24,198 | INFO     | traces error code: 0
[2025-04-19 23:57:24] 2025-04-19 21:57:24,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 23:57:24] 2025-04-19 21:57:24,244 [wrapper] ==== pilot stdout END ====
[2025-04-19 23:57:24] 2025-04-19 21:57:24,246 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 23:57:24] 2025-04-19 21:57:24,247 [wrapper] pilotpid: 153755
[2025-04-19 23:57:24] 2025-04-19 21:57:24,248 [wrapper] Pilot exit status: 0
[2025-04-19 23:57:24] 2025-04-19 21:57:24,254 [wrapper] pandaids: 6607872174
[2025-04-19 23:57:24] 2025-04-19 21:57:24,271 [wrapper] cleanup supervisor_pilot  172959 153756
[2025-04-19 23:57:24] 2025-04-19 21:57:24,272 [wrapper] Test setup, not cleaning
[2025-04-19 23:57:24] 2025-04-19 21:57:24,274 [wrapper] apfmon messages muted
[2025-04-19 23:57:24] 2025-04-19 21:57:24,275 [wrapper] ==== wrapper stdout END ====
[2025-04-19 23:57:24] 2025-04-19 21:57:24,277 [wrapper] ==== wrapper stderr END ====
[2025-04-19 23:57:24]  *** Error codes and diagnostics ***
[2025-04-19 23:57:24]     "exeErrorCode": 0,
[2025-04-19 23:57:24]     "exeErrorDiag": "",
[2025-04-19 23:57:24]     "pilotErrorCode": 0,
[2025-04-19 23:57:24]     "pilotErrorDiag": "",
[2025-04-19 23:57:24]  *** Listing of results directory ***
[2025-04-19 23:57:24] total 419844
[2025-04-19 23:57:24] -rw-r--r-- 1 david david    495897 Apr 19 16:33 pilot3.tar.gz
[2025-04-19 23:57:24] -rw-r--r-- 1 david david      5111 Apr 19 17:17 queuedata.json
[2025-04-19 23:57:24] -rwx------ 1 david david     37140 Apr 19 17:17 runpilot2-wrapper.sh
[2025-04-19 23:57:24] -rw-r--r-- 1 david david       100 Apr 19 23:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 23:57:24] -rwxr-xr-x 1 david david      7986 Apr 19 23:09 run_atlas
[2025-04-19 23:57:24] -rw-r--r-- 1 david david       105 Apr 19 23:09 job.xml
[2025-04-19 23:57:24] -rw-r--r-- 2 david david     17569 Apr 19 23:09 start_atlas.sh
[2025-04-19 23:57:24] drwxrwx--x 1 david david        76 Apr 19 23:09 shared
[2025-04-19 23:57:24] -rw-r--r-- 2 david david    508899 Apr 19 23:09 input.tar.gz
[2025-04-19 23:57:24] -rw-r--r-- 1 david david      7526 Apr 19 23:09 init_data.xml
[2025-04-19 23:57:24] -rw-r--r-- 2 david david 224457950 Apr 19 23:09 EVNT.44075481._003280.pool.root.1
[2025-04-19 23:57:24] -rw-r--r-- 1 david david         0 Apr 19 23:09 boinc_setup_complete
[2025-04-19 23:57:24] -rw-r--r-- 1 david david         0 Apr 19 23:09 boinc_lockfile
[2025-04-19 23:57:24] -rw-r--r-- 1 david david      2579 Apr 19 23:09 pandaJob.out
[2025-04-19 23:57:24] -rw------- 1 david david       424 Apr 19 23:09 setup.sh.local
[2025-04-19 23:57:24] -rw------- 1 david david    991284 Apr 19 23:09 agis_schedconf.cvmfs.json
[2025-04-19 23:57:24] -rw------- 1 david david   1618536 Apr 19 23:09 agis_ddmendpoints.agis.ALL.json
[2025-04-19 23:57:24] drwx------ 1 david david       368 Apr 19 23:09 pilot3
[2025-04-19 23:57:24] -rw------- 1 david david        95 Apr 19 23:56 pilot_heartbeat.json
[2025-04-19 23:57:24] -rw------- 1 david david 200301644 Apr 19 23:56 HITS.44075483._084619.pool.root.1
[2025-04-19 23:57:24] -rw-r--r-- 1 david david       529 Apr 19 23:56 boinc_task_state.xml
[2025-04-19 23:57:24] -rw------- 1 david david      1017 Apr 19 23:56 memory_monitor_summary.json
[2025-04-19 23:57:24] -rw------- 1 david david    348469 Apr 19 23:57 log.44075483._084619.job.log.tgz.1
[2025-04-19 23:57:24] -rw------- 1 david david      7657 Apr 19 23:57 heartbeat.json
[2025-04-19 23:57:24] -rw-r--r-- 1 david david      8192 Apr 19 23:57 boinc_mmap_file
[2025-04-19 23:57:24] -rw-r--r-- 1 david david        27 Apr 19 23:57 wrapper_checkpoint.txt
[2025-04-19 23:57:24] -rw------- 1 david david      4615 Apr 19 23:57 pilotlog.txt
[2025-04-19 23:57:24] -rw------- 1 david david    304874 Apr 19 23:57 log.44075483._084619.job.log.1
[2025-04-19 23:57:24] -rw------- 1 david david       357 Apr 19 23:57 output.list
[2025-04-19 23:57:24] -rw-r--r-- 1 david david       620 Apr 19 23:57 runtime_log
[2025-04-19 23:57:24] -rw------- 1 david david    675840 Apr 19 23:57 result.tar.gz
[2025-04-19 23:57:24] -rw-r--r-- 1 david david     11014 Apr 19 23:57 runtime_log.err
[2025-04-19 23:57:24] -rw------- 1 david david       638 Apr 19 23:57 GEDODmE8OQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5EiLDmnlsaTm.diag
[2025-04-19 23:57:24] -rw-r--r-- 1 david david     22427 Apr 19 23:57 stderr.txt
[2025-04-19 23:57:24] HITS file was successfully produced:
[2025-04-19 23:57:24] -rw------- 1 david david 200301644 Apr 19 23:56 shared/HITS.pool.root.1
[2025-04-19 23:57:24]  *** Contents of shared directory: ***
[2025-04-19 23:57:24] total 415988
[2025-04-19 23:57:24] -rw-r--r-- 2 david david     17569 Apr 19 23:09 start_atlas.sh
[2025-04-19 23:57:24] -rw-r--r-- 2 david david    508899 Apr 19 23:09 input.tar.gz
[2025-04-19 23:57:24] -rw-r--r-- 2 david david 224457950 Apr 19 23:09 ATLAS.root_0
[2025-04-19 23:57:24] -rw------- 1 david david 200301644 Apr 19 23:56 HITS.pool.root.1
[2025-04-19 23:57:24] -rw------- 1 david david    675840 Apr 19 23:57 result.tar.gz
23:57:25 (150062): run_atlas exited; CPU time 24389.073228
23:57:25 (150062): called boinc_finish(0)

</stderr_txt>
]]>

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