Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:42:11 (1642803): wrapper (7.7.26015): starting
07:42:11 (1642803): wrapper: running run_atlas (--nthreads 6)
[2025-04-20 07:42:11] Arguments: --nthreads 6
[2025-04-20 07:42:11] Threads: 6
[2025-04-20 07:42:11] Checking for CVMFS
[2025-04-20 07:42:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 07:42:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 07:42:11] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 07:42:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 07:42:12] 2.11.5.0 1474164 228 58296 145054 3 61 27163468 52428800 929 130560 0 451414 99.995 77483 113 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-20 07:42:12] CVMFS is ok
[2025-04-20 07:42:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 07:42:12] Checking for apptainer binary...
[2025-04-20 07:42:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 07:42:12] Running /usr/bin/apptainer --version
[2025-04-20 07:42:12] apptainer version 1.3.6-1.el9
[2025-04-20 07:42:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 07:42:12] testio002
[2025-04-20 07:42:12] apptainer works
[2025-04-20 07:42:12] Set ATHENA_PROC_NUMBER=6
[2025-04-20 07:42:12] Set ATHENA_CORE_NUMBER=6
[2025-04-20 07:42:12] Starting ATLAS job with PandaID=6607872078
[2025-04-20 07:42:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 08:55:37]  *** The last 200 lines of the pilot log: ***
[2025-04-20 08:55:37] 2025-04-19 23:54:34,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:36,937 | INFO     | monitor loop #340: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:36,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:39,440 | INFO     | monitor loop #341: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:39,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:40,151 | INFO     | PID=1646511 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-20 08:55:37] 2025-04-19 23:54:40,151 | INFO     | .. there are 2 such processes running
[2025-04-20 08:55:37] 2025-04-19 23:54:41,943 | INFO     | monitor loop #342: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:41,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:44,446 | INFO     | monitor loop #343: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:44,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:46,949 | INFO     | monitor loop #344: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:46,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:49,168 | INFO     | 4354s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-20 08:55:37] 2025-04-19 23:54:49,452 | INFO     | monitor loop #345: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:49,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:51,955 | INFO     | monitor loop #346: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:51,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:54,457 | INFO     | monitor loop #347: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:54,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:56,959 | INFO     | monitor loop #348: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:56,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:54:59,462 | INFO     | monitor loop #349: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:54:59,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:55:01,964 | INFO     | monitor loop #350: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:55:01,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:55:02,253 | INFO     | PID=1646511 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-20 08:55:37] 2025-04-19 23:55:02,253 | INFO     | .. there are 2 such processes running
[2025-04-20 08:55:37] 2025-04-19 23:55:04,466 | INFO     | monitor loop #351: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:55:04,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:55:06,969 | INFO     | monitor loop #352: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:55:06,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:55:09,472 | INFO     | monitor loop #353: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:55:09,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:55:11,975 | INFO     | monitor loop #354: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:55:11,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:55:14,478 | INFO     | monitor loop #355: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:55:14,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:55:16,981 | INFO     | monitor loop #356: job 0:6607872078 is in state 'finished'
[2025-04-20 08:55:37] 2025-04-19 23:55:16,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:55:37] 2025-04-19 23:55:18,213 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-20 08:55:37] 2025-04-19 23:55:18,213 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6607872078/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 08:55:37] 2025-04-19 23:55:18,213 | INFO     | extracted standard info from prmon json
[2025-04-20 08:55:37] 2025-04-19 23:55:18,214 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 08:55:37] 2025-04-19 23:55:18,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 08:55:37] 2025-04-19 23:55:18,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 08:55:37] 2025-04-19 23:55:18,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | fitting pss+swap vs Time
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | sum of square deviations: 81266640.0
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | sum of deviations: 11030073222.5
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | mean x: 1745104783.5
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | mean y: 2400562.484375
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | -- intersect: -236855349960.23944
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | intersect: -236855349960.23944
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | chi2: 1.9844184853945608
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | -- intersect: -236855349960.23944
[2025-04-20 08:55:37] 2025-04-19 23:55:18,215 | INFO     | current memory leak: 135.73 B/s (using 64 data points, chi2=1.98)
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | ..............................
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | . Timing measurements:
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | . get job = 0 s
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | . initial setup = 4 s
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | . payload setup = 2 s
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | . stage-in = 0 s
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | . payload execution = 4281 s
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | . stage-out = 0 s
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | . log creation = 0 s
[2025-04-20 08:55:37] 2025-04-19 23:55:18,216 | INFO     | ..............................
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | 
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | job summary report
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | --------------------------------------------------
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | PanDA job id: 6607872078
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | task id: 44075483
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | errors: (none)
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | pilot state: finished 
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | transexitcode: 0
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | exeerrorcode: 0
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | exeerrordiag: 
[2025-04-20 08:55:37] 2025-04-19 23:55:18,268 | INFO     | exitcode: 0
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | exitmsg: OK
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | cpuconsumptiontime: 20055 s
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | nevents: 400
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | neventsw: 0
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | pid: 1653091
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | pgrp: 1653091
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | corecount: 6
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | event service: False
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | sizes: {0: 2426824, 2: 2427030, 11: 2427058, 4288: 2462060, 4289: 2462060, 4366: 2462230}
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | --------------------------------------------------
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | 
[2025-04-20 08:55:37] 2025-04-19 23:55:18,269 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | job 6607872078 has completed (purged errors)
[2025-04-20 08:55:37] 2025-04-19 23:55:18,279 | INFO     | overall cleanup function is called
[2025-04-20 08:55:37] 2025-04-19 23:55:19,285 | INFO     | --- collectZombieJob: --- 10, [1653091]
[2025-04-20 08:55:37] 2025-04-19 23:55:19,285 | INFO     | zombie collector waiting for pid 1653091
[2025-04-20 08:55:37] 2025-04-19 23:55:19,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 08:55:37] 2025-04-19 23:55:19,285 | INFO     | collected zombie processes
[2025-04-20 08:55:37] 2025-04-19 23:55:19,285 | INFO     | will attempt to kill all subprocesses of pid=1653091
[2025-04-20 08:55:37] 2025-04-19 23:55:19,333 | INFO     | process IDs to be killed: [1653091] (in reverse order)
[2025-04-20 08:55:37] 2025-04-19 23:55:19,357 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 08:55:37] 2025-04-19 23:55:19,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 08:55:37] 2025-04-19 23:55:19,359 | INFO     | did not find any defunct processes belonging to 1653091
[2025-04-20 08:55:37] 2025-04-19 23:55:19,361 | INFO     | did not find any defunct processes belonging to 1653091
[2025-04-20 08:55:37] 2025-04-19 23:55:19,362 | INFO     | ready for new job
[2025-04-20 08:55:37] 2025-04-19 23:55:19,362 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 08:55:37] 2025-04-19 23:55:19,363 | INFO     | **************************************
[2025-04-20 08:55:37] 2025-04-19 23:55:19,363 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 08:55:37] 2025-04-19 23:55:19,363 | INFO     | **************************************
[2025-04-20 08:55:37] 2025-04-19 23:55:19,363 | INFO     | 
[2025-04-20 08:55:37] 2025-04-19 23:55:19,363 | INFO     | architecture information:
[2025-04-20 08:55:37] 2025-04-19 23:55:19,364 | INFO     | executing command: cat /etc/os-release
[2025-04-20 08:55:37] 2025-04-19 23:55:19,371 | INFO     | cat /etc/os-release:
[2025-04-20 08:55:37] NAME="CentOS Linux"
[2025-04-20 08:55:37] VERSION="7 (Core)"
[2025-04-20 08:55:37] ID="centos"
[2025-04-20 08:55:37] ID_LIKE="rhel fedora"
[2025-04-20 08:55:37] VERSION_ID="7"
[2025-04-20 08:55:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 08:55:37] ANSI_COLOR="0;31"
[2025-04-20 08:55:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 08:55:37] HOME_URL="https://www.centos.org/"
[2025-04-20 08:55:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 08:55:37] 
[2025-04-20 08:55:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 08:55:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 08:55:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 08:55:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 08:55:37] 
[2025-04-20 08:55:37] 2025-04-19 23:55:19,371 | INFO     | **************************************
[2025-04-20 08:55:37] 2025-04-19 23:55:19,874 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-04-20 08:55:37] 2025-04-19 23:55:19,883 | INFO     | sufficient remaining disk space (317567533056 B)
[2025-04-20 08:55:37] 2025-04-19 23:55:19,883 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 08:55:37] 2025-04-19 23:55:19,883 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 08:55:37] 2025-04-19 23:55:19,883 | INFO     | update_server=False
[2025-04-20 08:55:37] 2025-04-19 23:55:19,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 08:55:37] 2025-04-19 23:55:19,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 08:55:37] 2025-04-19 23:55:19,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 08:55:37] 2025-04-19 23:55:20,298 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 08:55:37] 2025-04-19 23:55:20,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 08:55:37] 2025-04-19 23:55:20,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 08:55:37] 2025-04-19 23:55:20,358 | INFO     | all data control threads have been joined
[2025-04-20 08:55:37] 2025-04-19 23:55:20,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 08:55:37] 2025-04-19 23:55:20,489 | INFO     | aborting loop
[2025-04-20 08:55:37] 2025-04-19 23:55:20,680 | INFO     | all job control threads have been joined
[2025-04-20 08:55:37] 2025-04-19 23:55:20,860 | INFO     | all payload control threads have been joined
[2025-04-20 08:55:37] 2025-04-19 23:55:20,888 | INFO     | [job] queue monitor thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:20,888 | INFO     | [job] retrieve thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:20,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 08:55:37] 2025-04-19 23:55:21,105 | INFO     | [payload] validate_post thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,363 | INFO     | [data] control thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,442 | INFO     | [job] validate thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,481 | INFO     | [payload] failed_post thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,494 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,494 | INFO     | [job] job monitor thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,628 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,683 | INFO     | [job] control thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,865 | INFO     | [payload] control thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:21,907 | INFO     | [data] copytool_in thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:22,032 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:22,992 | INFO     | [data] copytool_out thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:23,889 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:30,834 | INFO     | job.realtimelogging is not enabled
[2025-04-20 08:55:37] 2025-04-19 23:55:31,839 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 08:55:37] 2025-04-19 23:55:32,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362829666112)>', '<ExcThread(monitor, started 140362341410560)>']
[2025-04-20 08:55:37] 2025-04-19 23:55:33,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 08:55:37] 2025-04-19 23:55:33,363 | INFO     | [monitor] control thread has ended
[2025-04-20 08:55:37] 2025-04-19 23:55:37,767 | INFO     | all workflow threads have been joined
[2025-04-20 08:55:37] 2025-04-19 23:55:37,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 08:55:37] 2025-04-19 23:55:37,767 | INFO     | traces error code: 0
[2025-04-20 08:55:37] 2025-04-19 23:55:37,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 08:55:37] 2025-04-19 23:55:37,820 [wrapper] ==== pilot stdout END ====
[2025-04-20 08:55:37] 2025-04-19 23:55:37,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 08:55:37] 2025-04-19 23:55:37,822 [wrapper] pilotpid: 1646511
[2025-04-20 08:55:37] 2025-04-19 23:55:37,823 [wrapper] Pilot exit status: 0
[2025-04-20 08:55:37] 2025-04-19 23:55:37,828 [wrapper] pandaids: 6607872078
[2025-04-20 08:55:37] 2025-04-19 23:55:37,844 [wrapper] cleanup supervisor_pilot 1686242 1646512
[2025-04-20 08:55:37] 2025-04-19 23:55:37,845 [wrapper] Test setup, not cleaning
[2025-04-20 08:55:37] 2025-04-19 23:55:37,846 [wrapper] apfmon messages muted
[2025-04-20 08:55:37] 2025-04-19 23:55:37,847 [wrapper] ==== wrapper stdout END ====
[2025-04-20 08:55:37] 2025-04-19 23:55:37,848 [wrapper] ==== wrapper stderr END ====
[2025-04-20 08:55:37]  *** Error codes and diagnostics ***
[2025-04-20 08:55:37]     "exeErrorCode": 0,
[2025-04-20 08:55:37]     "exeErrorDiag": "",
[2025-04-20 08:55:37]     "pilotErrorCode": 0,
[2025-04-20 08:55:37]     "pilotErrorDiag": "",
[2025-04-20 08:55:37]  *** Listing of results directory ***
[2025-04-20 08:55:37] total 425300
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc    495897 Apr 19 23:33 pilot3.tar.gz
[2025-04-20 08:55:37] -rwx------. 1 boinc boinc     37140 Apr 20 00:14 runpilot2-wrapper.sh
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc      5111 Apr 20 00:14 queuedata.json
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc       100 Apr 20 07:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 08:55:37] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 07:42 run_atlas
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc       105 Apr 20 07:42 job.xml
[2025-04-20 08:55:37] -rw-r--r--. 2 boinc boinc 228431854 Apr 20 07:42 EVNT.44075481._003276.pool.root.1
[2025-04-20 08:55:37] -rw-r--r--. 2 boinc boinc     17569 Apr 20 07:42 start_atlas.sh
[2025-04-20 08:55:37] drwxrwx--x. 2 boinc boinc        68 Apr 20 07:42 shared
[2025-04-20 08:55:37] -rw-r--r--. 2 boinc boinc    508893 Apr 20 07:42 input.tar.gz
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc      9628 Apr 20 07:42 init_data.xml
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc         0 Apr 20 07:42 boinc_lockfile
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc      2579 Apr 20 07:42 pandaJob.out
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc       424 Apr 20 07:42 setup.sh.local
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc    991300 Apr 20 07:42 agis_schedconf.cvmfs.json
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc   1618536 Apr 20 07:42 agis_ddmendpoints.agis.ALL.json
[2025-04-20 08:55:37] drwx------. 4 boinc boinc      4096 Apr 20 07:42 pilot3
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc 201785099 Apr 20 08:53 HITS.44075483._084523.pool.root.1
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc       529 Apr 20 08:53 boinc_task_state.xml
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc      1027 Apr 20 08:53 memory_monitor_summary.json
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc    273708 Apr 20 08:54 log.44075483._084523.job.log.tgz.1
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc        95 Apr 20 08:54 pilot_heartbeat.json
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc        27 Apr 20 08:55 wrapper_checkpoint.txt
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc      8192 Apr 20 08:55 boinc_mmap_file
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc      7699 Apr 20 08:55 heartbeat.json
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc      4426 Apr 20 08:55 pilotlog.txt
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc    445907 Apr 20 08:55 log.44075483._084523.job.log.1
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc       357 Apr 20 08:55 output.list
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc       620 Apr 20 08:55 runtime_log
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc    737280 Apr 20 08:55 result.tar.gz
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc     10971 Apr 20 08:55 runtime_log.err
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc       641 Apr 20 08:55 FmHODm84OQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmpDiLDmrdVvSm.diag
[2025-04-20 08:55:37] -rw-r--r--. 1 boinc boinc     22072 Apr 20 08:55 stderr.txt
[2025-04-20 08:55:37] HITS file was successfully produced:
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc 201785099 Apr 20 08:53 shared/HITS.pool.root.1
[2025-04-20 08:55:37]  *** Contents of shared directory: ***
[2025-04-20 08:55:37] total 421376
[2025-04-20 08:55:37] -rw-r--r--. 2 boinc boinc 228431854 Apr 20 07:42 ATLAS.root_0
[2025-04-20 08:55:37] -rw-r--r--. 2 boinc boinc     17569 Apr 20 07:42 start_atlas.sh
[2025-04-20 08:55:37] -rw-r--r--. 2 boinc boinc    508893 Apr 20 07:42 input.tar.gz
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc 201785099 Apr 20 08:53 HITS.pool.root.1
[2025-04-20 08:55:37] -rw-------. 1 boinc boinc    737280 Apr 20 08:55 result.tar.gz
08:55:39 (1642803): run_atlas exited; CPU time 20079.824225
08:55:39 (1642803): called boinc_finish(0)

</stderr_txt>
]]>

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