Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:44:04 (1299095): wrapper (7.7.26015): starting
13:44:04 (1299095): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 13:44:04] Arguments: --nthreads 8
[2025-04-19 13:44:04] Threads: 8
[2025-04-19 13:44:04] Checking for CVMFS
[2025-04-19 13:44:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 13:44:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 13:44:04] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 13:44:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 13:44:05] 2.12.6.0 1570466 11596 163628 145046 0 233 30370550 32935936 24869 16776704 0 41698590 99.662 33971590 23831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 13:44:05] CVMFS is ok
[2025-04-19 13:44:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 13:44:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 13:44:05] Further information can be found at the LHC@home message board.
[2025-04-19 13:44:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 13:44:05] Checking for apptainer binary...
[2025-04-19 13:44:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 13:44:05] Running /usr/bin/apptainer --version
[2025-04-19 13:44:06] apptainer version 1.4.0-1.el9
[2025-04-19 13:44:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 13:44:06] c6-12-29-3.aglt2.org
[2025-04-19 13:44:06] apptainer works
[2025-04-19 13:44:06] Set ATHENA_PROC_NUMBER=8
[2025-04-19 13:44:06] Set ATHENA_CORE_NUMBER=8
[2025-04-19 13:44:06] Starting ATLAS job with PandaID=6607871933
[2025-04-19 13:44:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 18:38:51]  *** The last 200 lines of the pilot log: ***
[2025-04-19 18:38:51] 2025-04-19 22:38:34,231 | INFO     | -- intersect: -40280672219.12963
[2025-04-19 18:38:51] 2025-04-19 22:38:34,231 | INFO     | intersect: -40280672219.12963
[2025-04-19 18:38:51] 2025-04-19 22:38:34,235 | INFO     | chi2: 5.965835392014369
[2025-04-19 18:38:51] 2025-04-19 22:38:34,236 | INFO     | sum of square deviations: 7027894555.752641
[2025-04-19 18:38:51] 2025-04-19 22:38:34,238 | INFO     | sum of deviations: 187150670594.795
[2025-04-19 18:38:51] 2025-04-19 22:38:34,238 | INFO     | mean x: 1745093350.3427563
[2025-04-19 18:38:51] 2025-04-19 22:38:34,238 | INFO     | mean y: 2406402.8268551235
[2025-04-19 18:38:51] 2025-04-19 22:38:34,238 | INFO     | -- intersect: -46468892814.352165
[2025-04-19 18:38:51] 2025-04-19 22:38:34,238 | INFO     | intersect: -46468892814.352165
[2025-04-19 18:38:51] 2025-04-19 22:38:34,239 | INFO     | chi2: 5.1634511988915035
[2025-04-19 18:38:51] 2025-04-19 22:38:34,243 | INFO     | current chi2=5.1634511988915035 (change=13.449653575707185 %)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,243 | INFO     | right removable region: 282
[2025-04-19 18:38:51] 2025-04-19 22:38:34,244 | INFO     | sum of square deviations: 7027835385.752641
[2025-04-19 18:38:51] 2025-04-19 22:38:34,246 | INFO     | sum of deviations: 94544685811.33572
[2025-04-19 18:38:51] 2025-04-19 22:38:34,246 | INFO     | mean x: 1745093655.3427563
[2025-04-19 18:38:51] 2025-04-19 22:38:34,246 | INFO     | mean y: 2430699.749116608
[2025-04-19 18:38:51] 2025-04-19 22:38:34,246 | INFO     | -- intersect: -23474119660.297043
[2025-04-19 18:38:51] 2025-04-19 22:38:34,246 | INFO     | intersect: -23474119660.297043
[2025-04-19 18:38:51] 2025-04-19 22:38:34,251 | INFO     | chi2: 3.0917918885159
[2025-04-19 18:38:51] 2025-04-19 22:38:34,251 | INFO     | current chi2=3.0917918885159 (change=48.17503860977374 %)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,252 | INFO     | sum of square deviations: 6661836147.654664
[2025-04-19 18:38:51] 2025-04-19 22:38:34,254 | INFO     | sum of deviations: 37508020597.100716
[2025-04-19 18:38:51] 2025-04-19 22:38:34,254 | INFO     | mean x: 1745093807.8489208
[2025-04-19 18:38:51] 2025-04-19 22:38:34,254 | INFO     | mean y: 2454467.169064748
[2025-04-19 18:38:51] 2025-04-19 22:38:34,254 | INFO     | -- intersect: -9822916952.647982
[2025-04-19 18:38:51] 2025-04-19 22:38:34,254 | INFO     | intersect: -9822916952.647982
[2025-04-19 18:38:51] 2025-04-19 22:38:34,255 | INFO     | chi2: 1.6183736109061466
[2025-04-19 18:38:51] 2025-04-19 22:38:34,259 | INFO     | current chi2=1.6183736109061466 (change=47.65580384250938 %)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,260 | INFO     | sum of square deviations: 6308767384.53477
[2025-04-19 18:38:51] 2025-04-19 22:38:34,262 | INFO     | sum of deviations: -685667937.948719
[2025-04-19 18:38:51] 2025-04-19 22:38:34,262 | INFO     | mean x: 1745093960.3553114
[2025-04-19 18:38:51] 2025-04-19 22:38:34,262 | INFO     | mean y: 2470900.1025641025
[2025-04-19 18:38:51] 2025-04-19 22:38:34,263 | INFO     | -- intersect: 192136314.02427712
[2025-04-19 18:38:51] 2025-04-19 22:38:34,267 | INFO     | intersect: 192136314.02427712
[2025-04-19 18:38:51] 2025-04-19 22:38:34,268 | INFO     | chi2: 0.8515012199506905
[2025-04-19 18:38:51] 2025-04-19 22:38:34,268 | INFO     | current chi2=0.8515012199506905 (change=47.38537416746898 %)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,268 | INFO     | sum of square deviations: 5968413186.611968
[2025-04-19 18:38:51] 2025-04-19 22:38:34,270 | INFO     | sum of deviations: -3122886259.6044674
[2025-04-19 18:38:51] 2025-04-19 22:38:34,270 | INFO     | mean x: 1745094112.858209
[2025-04-19 18:38:51] 2025-04-19 22:38:34,270 | INFO     | mean y: 2471981.1156716417
[2025-04-19 18:38:51] 2025-04-19 22:38:34,271 | INFO     | -- intersect: 915567347.7344067
[2025-04-19 18:38:51] 2025-04-19 22:38:34,271 | INFO     | intersect: 915567347.7344067
[2025-04-19 18:38:51] 2025-04-19 22:38:34,275 | INFO     | chi2: 0.8412025170711872
[2025-04-19 18:38:51] 2025-04-19 22:38:34,275 | INFO     | current chi2=0.8412025170711872 (change=1.2094759981788028 %)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,276 | INFO     | left removable region: 40
[2025-04-19 18:38:51] 2025-04-19 22:38:34,276 | INFO     | sum of square deviations: 4394379764.500017
[2025-04-19 18:38:51] 2025-04-19 22:38:34,278 | INFO     | sum of deviations: 8433023881.590918
[2025-04-19 18:38:51] 2025-04-19 22:38:34,278 | INFO     | mean x: 1745094539.8636363
[2025-04-19 18:38:51] 2025-04-19 22:38:34,278 | INFO     | mean y: 2483409.623966942
[2025-04-19 18:38:51] 2025-04-19 22:38:34,278 | INFO     | -- intersect: -3346436055.459716
[2025-04-19 18:38:51] 2025-04-19 22:38:34,278 | INFO     | intersect: -3346436055.459716
[2025-04-19 18:38:51] 2025-04-19 22:38:34,279 | INFO     | chi2: 0.0008992043086597117
[2025-04-19 18:38:51] 2025-04-19 22:38:34,279 | INFO     | -- intersect: -3346436055.459716
[2025-04-19 18:38:51] 2025-04-19 22:38:34,283 | INFO     | current memory leak: 1.92 B/s (using 242 data points, chi2=0.00)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,284 | INFO     | ..............................
[2025-04-19 18:38:51] 2025-04-19 22:38:34,284 | INFO     | . Timing measurements:
[2025-04-19 18:38:51] 2025-04-19 22:38:34,284 | INFO     | . get job = 0 s
[2025-04-19 18:38:51] 2025-04-19 22:38:34,284 | INFO     | . initial setup = 3 s
[2025-04-19 18:38:51] 2025-04-19 22:38:34,284 | INFO     | . payload setup = 17 s
[2025-04-19 18:38:51] 2025-04-19 22:38:34,284 | INFO     | . stage-in = 0 s
[2025-04-19 18:38:51] 2025-04-19 22:38:34,285 | INFO     | . payload execution = 17552 s
[2025-04-19 18:38:51] 2025-04-19 22:38:34,285 | INFO     | . stage-out = 3 s
[2025-04-19 18:38:51] 2025-04-19 22:38:34,285 | INFO     | . log creation = 0 s
[2025-04-19 18:38:51] 2025-04-19 22:38:34,285 | INFO     | ..............................
[2025-04-19 18:38:51] 2025-04-19 22:38:34,482 | INFO     | 
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | job summary report
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | --------------------------------------------------
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | PanDA job id: 6607871933
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | task id: 44075483
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | errors: (none)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | pilot state: finished 
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | transexitcode: 0
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | exeerrorcode: 0
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | exeerrordiag: 
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | exitcode: 0
[2025-04-19 18:38:51] 2025-04-19 22:38:34,483 | INFO     | exitmsg: OK
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | cpuconsumptiontime: 48076 s
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | nevents: 400
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | neventsw: 0
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | pid: 1328675
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | pgrp: 1328675
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | corecount: 8
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | event service: False
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | sizes: {0: 2426652, 1: 2426851, 12: 2426851, 18: 2427085, 23: 2427113, 17575: 2458964, 17580: 2467905, 17581: 2467961, 17599: 2468131}
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | --------------------------------------------------
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | 
[2025-04-19 18:38:51] 2025-04-19 22:38:34,484 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-19 18:38:51] 2025-04-19 22:38:34,561 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 18:38:51] 2025-04-19 22:38:34,563 | INFO     | job 6607871933 has completed (purged errors)
[2025-04-19 18:38:51] 2025-04-19 22:38:34,564 | INFO     | overall cleanup function is called
[2025-04-19 18:38:51] 2025-04-19 22:38:35,572 | INFO     | --- collectZombieJob: --- 10, [1328675]
[2025-04-19 18:38:51] 2025-04-19 22:38:35,572 | INFO     | zombie collector waiting for pid 1328675
[2025-04-19 18:38:51] 2025-04-19 22:38:35,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 18:38:51] 2025-04-19 22:38:35,573 | INFO     | collected zombie processes
[2025-04-19 18:38:51] 2025-04-19 22:38:35,573 | INFO     | will attempt to kill all subprocesses of pid=1328675
[2025-04-19 18:38:51] 2025-04-19 22:38:36,488 | INFO     | process IDs to be killed: [1328675] (in reverse order)
[2025-04-19 18:38:51] 2025-04-19 22:38:36,713 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 18:38:51] 2025-04-19 22:38:36,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 18:38:51] 2025-04-19 22:38:36,746 | INFO     | did not find any defunct processes belonging to 1328675
[2025-04-19 18:38:51] 2025-04-19 22:38:36,779 | INFO     | did not find any defunct processes belonging to 1328675
[2025-04-19 18:38:51] 2025-04-19 22:38:36,779 | INFO     | ready for new job
[2025-04-19 18:38:51] 2025-04-19 22:38:36,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 18:38:51] 2025-04-19 22:38:36,786 | INFO     | **************************************
[2025-04-19 18:38:51] 2025-04-19 22:38:36,786 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 18:38:51] 2025-04-19 22:38:36,786 | INFO     | **************************************
[2025-04-19 18:38:51] 2025-04-19 22:38:36,786 | INFO     | 
[2025-04-19 18:38:51] 2025-04-19 22:38:36,809 | INFO     | architecture information:
[2025-04-19 18:38:51] 2025-04-19 22:38:36,811 | INFO     | executing command: cat /etc/os-release
[2025-04-19 18:38:51] 2025-04-19 22:38:36,873 | INFO     | cat /etc/os-release:
[2025-04-19 18:38:51] NAME="CentOS Linux"
[2025-04-19 18:38:51] VERSION="7 (Core)"
[2025-04-19 18:38:51] ID="centos"
[2025-04-19 18:38:51] ID_LIKE="rhel fedora"
[2025-04-19 18:38:51] VERSION_ID="7"
[2025-04-19 18:38:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 18:38:51] ANSI_COLOR="0;31"
[2025-04-19 18:38:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 18:38:51] HOME_URL="https://www.centos.org/"
[2025-04-19 18:38:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 18:38:51] 
[2025-04-19 18:38:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 18:38:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 18:38:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 18:38:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 18:38:51] 
[2025-04-19 18:38:51] 2025-04-19 22:38:36,874 | INFO     | **************************************
[2025-04-19 18:38:51] 2025-04-19 22:38:37,382 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-19 18:38:51] 2025-04-19 22:38:37,518 | INFO     | sufficient remaining disk space (93693411328 B)
[2025-04-19 18:38:51] 2025-04-19 22:38:37,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 18:38:51] 2025-04-19 22:38:37,519 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 18:38:51] 2025-04-19 22:38:37,519 | INFO     | update_server=False
[2025-04-19 18:38:51] 2025-04-19 22:38:37,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 18:38:51] 2025-04-19 22:38:37,734 | INFO     | all data control threads have been joined
[2025-04-19 18:38:51] 2025-04-19 22:38:37,734 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 18:38:51] 2025-04-19 22:38:37,735 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 18:38:51] 2025-04-19 22:38:37,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:38:51] 2025-04-19 22:38:37,735 | INFO     | will abort loop
[2025-04-19 18:38:51] 2025-04-19 22:38:37,889 | INFO     | PID=1308873 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 18:38:51] 2025-04-19 22:38:37,891 | INFO     | .. there are 25 such processes running
[2025-04-19 18:38:51] 2025-04-19 22:38:37,891 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 18:38:51] 2025-04-19 22:38:37,891 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 18:38:51] 2025-04-19 22:38:37,891 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 18:38:51] 2025-04-19 22:38:38,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 18:38:51] 2025-04-19 22:38:38,081 | INFO     | all job control threads have been joined
[2025-04-19 18:38:51] 2025-04-19 22:38:38,525 | INFO     | [job] retrieve thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:38,740 | INFO     | [data] control thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:38,741 | INFO     | [job] job monitor thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:38,776 | INFO     | all payload control threads have been joined
[2025-04-19 18:38:51] 2025-04-19 22:38:38,904 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:39,029 | INFO     | [data] copytool_in thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:39,086 | INFO     | [job] control thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:39,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:38:51] 2025-04-19 22:38:39,585 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:39,638 | INFO     | [payload] failed_post thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:39,639 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:39,782 | INFO     | [payload] control thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:39,906 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:39,944 | INFO     | [job] validate thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:40,052 | INFO     | [payload] validate_post thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:40,075 | INFO     | [data] copytool_out thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:40,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 18:38:51] 2025-04-19 22:38:40,515 | INFO     | [job] queue monitor thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:44,435 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 18:38:51] 2025-04-19 22:38:44,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229508216640)>', '<ExcThread(monitor, started 140228769593088)>']
[2025-04-19 18:38:51] 2025-04-19 22:38:44,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 18:38:51] 2025-04-19 22:38:44,954 | INFO     | [monitor] control thread has ended
[2025-04-19 18:38:51] 2025-04-19 22:38:49,661 | INFO     | all workflow threads have been joined
[2025-04-19 18:38:51] 2025-04-19 22:38:49,684 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 18:38:51] 2025-04-19 22:38:49,684 | INFO     | traces error code: 0
[2025-04-19 18:38:51] 2025-04-19 22:38:49,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 18:38:51] 2025-04-19 22:38:50,727 [wrapper] ==== pilot stdout END ====
[2025-04-19 18:38:51] 2025-04-19 22:38:50,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 18:38:51] 2025-04-19 22:38:50,732 [wrapper] pilotpid: 1308873
[2025-04-19 18:38:51] 2025-04-19 22:38:50,735 [wrapper] Pilot exit status: 0
[2025-04-19 18:38:51] 2025-04-19 22:38:50,792 [wrapper] pandaids: 6607871933
[2025-04-19 18:38:51] 2025-04-19 22:38:50,895 [wrapper] cleanup supervisor_pilot 2648515 1308874
[2025-04-19 18:38:51] 2025-04-19 22:38:50,910 [wrapper] Test setup, not cleaning
[2025-04-19 18:38:51] 2025-04-19 22:38:50,937 [wrapper] apfmon messages muted
[2025-04-19 18:38:51] 2025-04-19 22:38:50,957 [wrapper] ==== wrapper stdout END ====
[2025-04-19 18:38:51] 2025-04-19 22:38:50,979 [wrapper] ==== wrapper stderr END ====
[2025-04-19 18:38:51]  *** Error codes and diagnostics ***
[2025-04-19 18:38:51]     "exeErrorCode": 0,
[2025-04-19 18:38:51]     "exeErrorDiag": "",
[2025-04-19 18:38:51]     "pilotErrorCode": 0,
[2025-04-19 18:38:51]     "pilotErrorDiag": "",
[2025-04-19 18:38:51]  *** Listing of results directory ***
[2025-04-19 18:38:51] total 417444
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 10:33 pilot3.tar.gz
[2025-04-19 18:38:51] -rwx------. 1 boincer umatlas     37140 Apr 19 11:01 runpilot2-wrapper.sh
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 11:01 queuedata.json
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas       100 Apr 19 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 18:38:51] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 13:44 run_atlas
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas       105 Apr 19 13:44 job.xml
[2025-04-19 18:38:51] -rw-r--r--. 2 boincer umatlas 224263769 Apr 19 13:44 EVNT.44075481._003271.pool.root.1
[2025-04-19 18:38:51] -rw-r--r--. 2 boincer umatlas    508888 Apr 19 13:44 input.tar.gz
[2025-04-19 18:38:51] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 13:44 start_atlas.sh
[2025-04-19 18:38:51] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 13:44 shared
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas         0 Apr 19 13:44 boinc_lockfile
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 13:44 pandaJob.out
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas       467 Apr 19 13:44 setup.sh.local
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas    991244 Apr 19 13:44 agis_schedconf.cvmfs.json
[2025-04-19 18:38:51] drwx------. 4 boincer umatlas      4096 Apr 19 13:44 pilot3
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas      6859 Apr 19 18:30 init_data.xml
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas 195665847 Apr 19 18:37 HITS.44075483._084388.pool.root.1
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas       531 Apr 19 18:37 boinc_task_state.xml
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas        95 Apr 19 18:37 pilot_heartbeat.json
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas      1056 Apr 19 18:38 memory_monitor_summary.json
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas   1618536 Apr 19 18:38 agis_ddmendpoints.agis.ALL.json
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas    414372 Apr 19 18:38 log.44075483._084388.job.log.tgz.1
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas      7739 Apr 19 18:38 heartbeat.json
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 18:38 boinc_mmap_file
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas      4934 Apr 19 18:38 pilotlog.txt
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas        28 Apr 19 18:38 wrapper_checkpoint.txt
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas   1421044 Apr 19 18:38 log.44075483._084388.job.log.1
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas       357 Apr 19 18:38 output.list
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas       620 Apr 19 18:38 runtime_log
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas   1853440 Apr 19 18:38 result.tar.gz
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas     11429 Apr 19 18:38 runtime_log.err
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas       663 Apr 19 18:38 izEMDmMsOQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm9BiLDmjILZFo.diag
[2025-04-19 18:38:51] -rw-r--r--. 1 boincer umatlas     20999 Apr 19 18:38 stderr.txt
[2025-04-19 18:38:51] HITS file was successfully produced:
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas 195665847 Apr 19 18:37 shared/HITS.pool.root.1
[2025-04-19 18:38:51]  *** Contents of shared directory: ***
[2025-04-19 18:38:51] total 412424
[2025-04-19 18:38:51] -rw-r--r--. 2 boincer umatlas 224263769 Apr 19 13:44 ATLAS.root_0
[2025-04-19 18:38:51] -rw-r--r--. 2 boincer umatlas    508888 Apr 19 13:44 input.tar.gz
[2025-04-19 18:38:51] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 13:44 start_atlas.sh
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas 195665847 Apr 19 18:37 HITS.pool.root.1
[2025-04-19 18:38:51] -rw-------. 1 boincer umatlas   1853440 Apr 19 18:38 result.tar.gz
18:38:52 (1299095): run_atlas exited; CPU time 48755.134554
18:38:52 (1299095): called boinc_finish(0)

</stderr_txt>
]]>

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