Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:06:49 (4915): wrapper (7.7.26015): starting
13:06:49 (4915): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 13:06:49] Arguments: --nthreads 12
[2025-04-19 13:06:49] Threads: 12
[2025-04-19 13:06:49] Checking for CVMFS
[2025-04-19 13:06:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 13:06:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 13:06:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 13:06:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 13:06:50] 2.11.2.0 30117 44401 115632 145045 2 334 11306013 18432001 5149 130560 0 58828287 98.391 207806436 31809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 13:06:50] CVMFS is ok
[2025-04-19 13:06:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 13:06:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 13:06:50] Further information can be found at the LHC@home message board.
[2025-04-19 13:06:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 13:06:50] Checking for apptainer binary...
[2025-04-19 13:06:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 13:06:50] Running /usr/bin/apptainer --version
[2025-04-19 13:06:50] apptainer version 1.3.2-1.el7
[2025-04-19 13:06:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 13:06:51] c-206-6.aglt2.org
[2025-04-19 13:06:51] apptainer works
[2025-04-19 13:06:51] Set ATHENA_PROC_NUMBER=12
[2025-04-19 13:06:51] Set ATHENA_CORE_NUMBER=12
[2025-04-19 13:06:51] Starting ATLAS job with PandaID=6607871271
[2025-04-19 13:06:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 07:05:12]  *** The last 200 lines of the pilot log: ***
[2025-04-20 07:05:12] 2025-04-20 11:04:48,690 | INFO     | mean x: 1745114733.3607178
[2025-04-20 07:05:12] 2025-04-20 11:04:48,690 | INFO     | mean y: 2616540.399433428
[2025-04-20 07:05:12] 2025-04-20 11:04:48,690 | INFO     | -- intersect: -5466345454.785385
[2025-04-20 07:05:12] 2025-04-20 11:04:48,690 | INFO     | intersect: -5466345454.785385
[2025-04-20 07:05:12] 2025-04-20 11:04:48,704 | INFO     | chi2: 9.765591275641556
[2025-04-20 07:05:12] 2025-04-20 11:04:48,720 | INFO     | sum of square deviations: 363084543551.40436
[2025-04-20 07:05:12] 2025-04-20 11:04:48,768 | INFO     | sum of deviations: 1375687929525.8467
[2025-04-20 07:05:12] 2025-04-20 11:04:48,768 | INFO     | mean x: 1745114580.8671727
[2025-04-20 07:05:12] 2025-04-20 11:04:48,768 | INFO     | mean y: 2623035.906072106
[2025-04-20 07:05:12] 2025-04-20 11:04:48,769 | INFO     | -- intersect: -6609426711.671901
[2025-04-20 07:05:12] 2025-04-20 11:04:48,769 | INFO     | intersect: -6609426711.671901
[2025-04-20 07:05:12] 2025-04-20 11:04:48,771 | INFO     | chi2: 7.398222519569682
[2025-04-20 07:05:12] 2025-04-20 11:04:48,771 | INFO     | current chi2=7.398222519569682 (change=24.24193977866792 %)
[2025-04-20 07:05:12] 2025-04-20 11:04:48,771 | INFO     | right removable region: 1053
[2025-04-20 07:05:12] 2025-04-20 11:04:48,773 | INFO     | sum of square deviations: 363083664541.4048
[2025-04-20 07:05:12] 2025-04-20 11:04:48,835 | INFO     | sum of deviations: 843849828102.8959
[2025-04-20 07:05:12] 2025-04-20 11:04:48,864 | INFO     | mean x: 1745114885.8671727
[2025-04-20 07:05:12] 2025-04-20 11:04:48,864 | INFO     | mean y: 2625649.820683112
[2025-04-20 07:05:12] 2025-04-20 11:04:48,864 | INFO     | -- intersect: -4053229901.5955844
[2025-04-20 07:05:12] 2025-04-20 11:04:48,864 | INFO     | intersect: -4053229901.5955844
[2025-04-20 07:05:12] 2025-04-20 11:04:48,886 | INFO     | chi2: 6.907132648904726
[2025-04-20 07:05:12] 2025-04-20 11:04:48,886 | INFO     | current chi2=6.907132648904726 (change=29.27071742052856 %)
[2025-04-20 07:05:12] 2025-04-20 11:04:48,888 | INFO     | sum of square deviations: 357940551859.5134
[2025-04-20 07:05:12] 2025-04-20 11:04:48,956 | INFO     | sum of deviations: 585048897073.4349
[2025-04-20 07:05:12] 2025-04-20 11:04:48,956 | INFO     | mean x: 1745115038.3736892
[2025-04-20 07:05:12] 2025-04-20 11:04:48,956 | INFO     | mean y: 2633324.2259294568
[2025-04-20 07:05:12] 2025-04-20 11:04:48,956 | INFO     | -- intersect: -2849733146.0238876
[2025-04-20 07:05:12] 2025-04-20 11:04:48,956 | INFO     | intersect: -2849733146.0238876
[2025-04-20 07:05:12] 2025-04-20 11:04:48,958 | INFO     | chi2: 5.03387999727389
[2025-04-20 07:05:12] 2025-04-20 11:04:48,958 | INFO     | current chi2=5.03387999727389 (change=27.120554169867876 %)
[2025-04-20 07:05:12] 2025-04-20 11:04:48,960 | INFO     | sum of square deviations: 352846294536.7936
[2025-04-20 07:05:12] 2025-04-20 11:04:49,032 | INFO     | sum of deviations: 331568872803.2239
[2025-04-20 07:05:12] 2025-04-20 11:04:49,061 | INFO     | mean x: 1745115190.8793104
[2025-04-20 07:05:12] 2025-04-20 11:04:49,061 | INFO     | mean y: 2640912.2557471264
[2025-04-20 07:05:12] 2025-04-20 11:04:49,061 | INFO     | -- intersect: -1637239924.5580251
[2025-04-20 07:05:12] 2025-04-20 11:04:49,061 | INFO     | intersect: -1637239924.5580251
[2025-04-20 07:05:12] 2025-04-20 11:04:49,084 | INFO     | chi2: 3.2478666333143917
[2025-04-20 07:05:12] 2025-04-20 11:04:49,094 | INFO     | current chi2=3.2478666333143917 (change=35.47985579566295 %)
[2025-04-20 07:05:12] 2025-04-20 11:04:49,110 | INFO     | sum of square deviations: 347800596508.0053
[2025-04-20 07:05:12] 2025-04-20 11:04:49,206 | INFO     | sum of deviations: 195393666389.94482
[2025-04-20 07:05:12] 2025-04-20 11:04:49,207 | INFO     | mean x: 1745115343.3849854
[2025-04-20 07:05:12] 2025-04-20 11:04:49,207 | INFO     | mean y: 2645027.342637151
[2025-04-20 07:05:12] 2025-04-20 11:04:49,207 | INFO     | -- intersect: -977757216.4743639
[2025-04-20 07:05:12] 2025-04-20 11:04:49,207 | INFO     | intersect: -977757216.4743639
[2025-04-20 07:05:12] 2025-04-20 11:04:49,209 | INFO     | chi2: 2.7460071360311096
[2025-04-20 07:05:12] 2025-04-20 11:04:49,209 | INFO     | current chi2=2.7460071360311096 (change=15.451973678215452 %)
[2025-04-20 07:05:12] 2025-04-20 11:04:49,209 | INFO     | left removable region: 40
[2025-04-20 07:05:12] 2025-04-20 11:04:49,211 | INFO     | sum of square deviations: 322338652347.0794
[2025-04-20 07:05:12] 2025-04-20 11:04:49,249 | INFO     | sum of deviations: 266545726690.7713
[2025-04-20 07:05:12] 2025-04-20 11:04:49,250 | INFO     | mean x: 1745115770.3998027
[2025-04-20 07:05:12] 2025-04-20 11:04:49,250 | INFO     | mean y: 2656415.854886476
[2025-04-20 07:05:12] 2025-04-20 11:04:49,250 | INFO     | -- intersect: -1440400902.259992
[2025-04-20 07:05:12] 2025-04-20 11:04:49,250 | INFO     | intersect: -1440400902.259992
[2025-04-20 07:05:12] 2025-04-20 11:04:49,252 | INFO     | chi2: 0.018375696615808214
[2025-04-20 07:05:12] 2025-04-20 11:04:49,252 | INFO     | -- intersect: -1440400902.259992
[2025-04-20 07:05:12] 2025-04-20 11:04:49,252 | INFO     | current memory leak: 0.83 B/s (using 1013 data points, chi2=0.02)
[2025-04-20 07:05:12] 2025-04-20 11:04:49,254 | INFO     | ..............................
[2025-04-20 07:05:12] 2025-04-20 11:04:49,254 | INFO     | . Timing measurements:
[2025-04-20 07:05:12] 2025-04-20 11:04:49,254 | INFO     | . get job = 0 s
[2025-04-20 07:05:12] 2025-04-20 11:04:49,254 | INFO     | . initial setup = 3 s
[2025-04-20 07:05:12] 2025-04-20 11:04:49,255 | INFO     | . payload setup = 8 s
[2025-04-20 07:05:12] 2025-04-20 11:04:49,255 | INFO     | . stage-in = 0 s
[2025-04-20 07:05:12] 2025-04-20 11:04:49,255 | INFO     | . payload execution = 64550 s
[2025-04-20 07:05:12] 2025-04-20 11:04:49,255 | INFO     | . stage-out = 11 s
[2025-04-20 07:05:12] 2025-04-20 11:04:49,255 | INFO     | . log creation = 2 s
[2025-04-20 07:05:12] 2025-04-20 11:04:49,256 | INFO     | ..............................
[2025-04-20 07:05:12] 2025-04-20 11:04:50,072 | INFO     | 
[2025-04-20 07:05:12] 2025-04-20 11:04:50,072 | INFO     | job summary report
[2025-04-20 07:05:12] 2025-04-20 11:04:50,072 | INFO     | --------------------------------------------------
[2025-04-20 07:05:12] 2025-04-20 11:04:50,073 | INFO     | PanDA job id: 6607871271
[2025-04-20 07:05:12] 2025-04-20 11:04:50,073 | INFO     | task id: 44075483
[2025-04-20 07:05:12] 2025-04-20 11:04:50,073 | INFO     | errors: (none)
[2025-04-20 07:05:12] 2025-04-20 11:04:50,073 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 07:05:12] 2025-04-20 11:04:50,073 | INFO     | pilot state: finished 
[2025-04-20 07:05:12] 2025-04-20 11:04:50,074 | INFO     | transexitcode: 0
[2025-04-20 07:05:12] 2025-04-20 11:04:50,074 | INFO     | exeerrorcode: 0
[2025-04-20 07:05:12] 2025-04-20 11:04:50,074 | INFO     | exeerrordiag: 
[2025-04-20 07:05:12] 2025-04-20 11:04:50,074 | INFO     | exitcode: 0
[2025-04-20 07:05:12] 2025-04-20 11:04:50,074 | INFO     | exitmsg: OK
[2025-04-20 07:05:12] 2025-04-20 11:04:50,075 | INFO     | cpuconsumptiontime: 92486 s
[2025-04-20 07:05:12] 2025-04-20 11:04:50,075 | INFO     | nevents: 400
[2025-04-20 07:05:12] 2025-04-20 11:04:50,075 | INFO     | neventsw: 0
[2025-04-20 07:05:12] 2025-04-20 11:04:50,075 | INFO     | pid: 15316
[2025-04-20 07:05:12] 2025-04-20 11:04:50,075 | INFO     | pgrp: 15316
[2025-04-20 07:05:12] 2025-04-20 11:04:50,075 | INFO     | corecount: 12
[2025-04-20 07:05:12] 2025-04-20 11:04:50,076 | INFO     | event service: False
[2025-04-20 07:05:12] 2025-04-20 11:04:50,076 | INFO     | sizes: {0: 2426653, 1: 2426852, 6: 2427058, 12: 2427086, 64565: 2477947, 64567: 2477946, 64580: 2487071, 64583: 2487127, 64647: 2487297}
[2025-04-20 07:05:12] 2025-04-20 11:04:50,076 | INFO     | --------------------------------------------------
[2025-04-20 07:05:12] 2025-04-20 11:04:50,076 | INFO     | 
[2025-04-20 07:05:12] 2025-04-20 11:04:50,077 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-20 07:05:12] 2025-04-20 11:04:50,270 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,299 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 07:05:12] 2025-04-20 11:04:50,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 07:05:12] 2025-04-20 11:04:50,299 | INFO     | job 6607871271 has completed (purged errors)
[2025-04-20 07:05:12] 2025-04-20 11:04:50,299 | INFO     | overall cleanup function is called
[2025-04-20 07:05:12] 2025-04-20 11:04:51,335 | INFO     | --- collectZombieJob: --- 10, [15316]
[2025-04-20 07:05:12] 2025-04-20 11:04:51,336 | INFO     | zombie collector waiting for pid 15316
[2025-04-20 07:05:12] 2025-04-20 11:04:51,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 07:05:12] 2025-04-20 11:04:51,336 | INFO     | collected zombie processes
[2025-04-20 07:05:12] 2025-04-20 11:04:51,380 | INFO     | will attempt to kill all subprocesses of pid=15316
[2025-04-20 07:05:12] 2025-04-20 11:04:52,475 | INFO     | PID=8658 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-20 07:05:12] 2025-04-20 11:04:52,475 | INFO     | .. there are 11 such processes running
[2025-04-20 07:05:12] 2025-04-20 11:04:52,500 | INFO     | process IDs to be killed: [15316] (in reverse order)
[2025-04-20 07:05:12] 2025-04-20 11:04:52,586 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 07:05:12] 2025-04-20 11:04:52,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 07:05:12] 2025-04-20 11:04:52,595 | INFO     | did not find any defunct processes belonging to 15316
[2025-04-20 07:05:12] 2025-04-20 11:04:52,603 | INFO     | did not find any defunct processes belonging to 15316
[2025-04-20 07:05:12] 2025-04-20 11:04:52,603 | INFO     | ready for new job
[2025-04-20 07:05:12] 2025-04-20 11:04:52,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 07:05:12] 2025-04-20 11:04:52,606 | INFO     | **************************************
[2025-04-20 07:05:12] 2025-04-20 11:04:52,607 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 07:05:12] 2025-04-20 11:04:52,607 | INFO     | **************************************
[2025-04-20 07:05:12] 2025-04-20 11:04:52,607 | INFO     | 
[2025-04-20 07:05:12] 2025-04-20 11:04:52,608 | INFO     | architecture information:
[2025-04-20 07:05:12] 2025-04-20 11:04:52,618 | INFO     | executing command: cat /etc/os-release
[2025-04-20 07:05:12] 2025-04-20 11:04:52,936 | INFO     | cat /etc/os-release:
[2025-04-20 07:05:12] NAME="CentOS Linux"
[2025-04-20 07:05:12] VERSION="7 (Core)"
[2025-04-20 07:05:12] ID="centos"
[2025-04-20 07:05:12] ID_LIKE="rhel fedora"
[2025-04-20 07:05:12] VERSION_ID="7"
[2025-04-20 07:05:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 07:05:12] ANSI_COLOR="0;31"
[2025-04-20 07:05:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 07:05:12] HOME_URL="https://www.centos.org/"
[2025-04-20 07:05:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 07:05:12] 
[2025-04-20 07:05:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 07:05:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 07:05:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 07:05:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 07:05:12] 
[2025-04-20 07:05:12] 2025-04-20 11:04:52,953 | INFO     | **************************************
[2025-04-20 07:05:12] 2025-04-20 11:04:53,456 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-20 07:05:12] 2025-04-20 11:04:53,780 | INFO     | sufficient remaining disk space (29211230208 B)
[2025-04-20 07:05:12] 2025-04-20 11:04:53,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 07:05:12] 2025-04-20 11:04:53,781 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 07:05:12] 2025-04-20 11:04:53,781 | INFO     | update_server=False
[2025-04-20 07:05:12] 2025-04-20 11:04:53,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 07:05:12] 2025-04-20 11:04:53,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 07:05:12] 2025-04-20 11:04:53,781 | INFO     | aborting loop
[2025-04-20 07:05:12] 2025-04-20 11:04:53,832 | INFO     | all job control threads have been joined
[2025-04-20 07:05:12] 2025-04-20 11:04:54,359 | INFO     | all data control threads have been joined
[2025-04-20 07:05:12] 2025-04-20 11:04:54,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 07:05:12] 2025-04-20 11:04:54,559 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 07:05:12] 2025-04-20 11:04:54,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 07:05:12] 2025-04-20 11:04:54,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 07:05:12] 2025-04-20 11:04:54,579 | INFO     | all payload control threads have been joined
[2025-04-20 07:05:12] 2025-04-20 11:04:54,786 | INFO     | [job] retrieve thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:54,804 | INFO     | [job] job monitor thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:54,840 | INFO     | [job] control thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 07:05:12] 2025-04-20 11:04:55,216 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,366 | INFO     | [data] control thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,541 | INFO     | [payload] validate_post thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,585 | INFO     | [payload] control thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,741 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,755 | INFO     | [data] copytool_in thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,772 | INFO     | [job] validate thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,881 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:55,945 | INFO     | [payload] failed_post thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:56,111 | INFO     | [job] queue monitor thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:04:56,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 07:05:12] 2025-04-20 11:04:56,467 | INFO     | [data] copytool_out thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:05:00,379 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 07:05:12] 2025-04-20 11:05:01,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706532247360)>', '<ExcThread(monitor, started 139705807001344)>']
[2025-04-20 07:05:12] 2025-04-20 11:05:02,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 07:05:12] 2025-04-20 11:05:02,623 | INFO     | [monitor] control thread has ended
[2025-04-20 07:05:12] 2025-04-20 11:05:06,909 | INFO     | all workflow threads have been joined
[2025-04-20 07:05:12] 2025-04-20 11:05:06,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 07:05:12] 2025-04-20 11:05:06,929 | INFO     | traces error code: 0
[2025-04-20 07:05:12] 2025-04-20 11:05:06,930 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 07:05:12] 2025-04-20 11:05:09,638 [wrapper] ==== pilot stdout END ====
[2025-04-20 07:05:12] 2025-04-20 11:05:09,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 07:05:12] 2025-04-20 11:05:09,804 [wrapper] pilotpid: 8658
[2025-04-20 07:05:12] 2025-04-20 11:05:09,859 [wrapper] Pilot exit status: 0
[2025-04-20 07:05:12] 2025-04-20 11:05:10,189 [wrapper] pandaids: 6607871271
[2025-04-20 07:05:12] 2025-04-20 11:05:10,853 [wrapper] cleanup supervisor_pilot  3033 8659
[2025-04-20 07:05:12] 2025-04-20 11:05:10,865 [wrapper] Test setup, not cleaning
[2025-04-20 07:05:12] 2025-04-20 11:05:10,869 [wrapper] apfmon messages muted
[2025-04-20 07:05:12] 2025-04-20 11:05:10,872 [wrapper] ==== wrapper stdout END ====
[2025-04-20 07:05:12] 2025-04-20 11:05:10,925 [wrapper] ==== wrapper stderr END ====
[2025-04-20 07:05:12]  *** Error codes and diagnostics ***
[2025-04-20 07:05:12]     "exeErrorCode": 0,
[2025-04-20 07:05:12]     "exeErrorDiag": "",
[2025-04-20 07:05:12]     "pilotErrorCode": 0,
[2025-04-20 07:05:12]     "pilotErrorDiag": "",
[2025-04-20 07:05:12]  *** Listing of results directory ***
[2025-04-20 07:05:12] total 420060
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 10:18 pilot3.tar.gz
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 10:25 queuedata.json
[2025-04-20 07:05:12] -rwx------ 1 boincer umatlas     37140 Apr 19 10:26 runpilot2-wrapper.sh
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas       100 Apr 19 13:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 07:05:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 13:06 run_atlas
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas       105 Apr 19 13:06 job.xml
[2025-04-20 07:05:12] -rw-r--r-- 2 boincer umatlas 223096863 Apr 19 13:06 EVNT.44075481._003255.pool.root.1
[2025-04-20 07:05:12] drwxrwx--x 2 boincer umatlas      4096 Apr 19 13:06 shared
[2025-04-20 07:05:12] -rw-r--r-- 2 boincer umatlas    508897 Apr 19 13:06 input.tar.gz
[2025-04-20 07:05:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 13:06 start_atlas.sh
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas         0 Apr 19 13:06 boinc_lockfile
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 13:06 pandaJob.out
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas       467 Apr 19 13:06 setup.sh.local
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas    991268 Apr 19 13:07 agis_schedconf.cvmfs.json
[2025-04-20 07:05:12] drwx------ 4 boincer umatlas      4096 Apr 19 13:07 pilot3
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas 192358024 Apr 20 06:59 HITS.44075483._083985.pool.root.1
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas       531 Apr 20 07:00 boinc_task_state.xml
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas      5950 Apr 20 07:02 init_data.xml
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas      1064 Apr 20 07:03 memory_monitor_summary.json
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas   1618536 Apr 20 07:03 agis_ddmendpoints.agis.ALL.json
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas    837862 Apr 20 07:03 log.44075483._083985.job.log.tgz.1
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas        95 Apr 20 07:04 pilot_heartbeat.json
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas      7769 Apr 20 07:04 heartbeat.json
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas      8192 Apr 20 07:04 boinc_mmap_file
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas        28 Apr 20 07:04 wrapper_checkpoint.txt
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas      4353 Apr 20 07:05 pilotlog.txt
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas   4573296 Apr 20 07:05 log.44075483._083985.job.log.1
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas       357 Apr 20 07:05 output.list
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas       620 Apr 20 07:05 runtime_log
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas   5427200 Apr 20 07:05 result.tar.gz
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas     11416 Apr 20 07:05 runtime_log.err
[2025-04-20 07:05:12] -rw------- 1 boincer umatlas       664 Apr 20 07:05 JkOMDm2JOQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmRd6KDm0gKK6m.diag
[2025-04-20 07:05:12] -rw-r--r-- 1 boincer umatlas     20916 Apr 20 07:05 stderr.txt
[2025-04-20 07:05:13] HITS file was successfully produced:
[2025-04-20 07:05:13] -rw------- 1 boincer umatlas 192358024 Apr 20 06:59 shared/HITS.pool.root.1
[2025-04-20 07:05:13]  *** Contents of shared directory: ***
[2025-04-20 07:05:13] total 411548
[2025-04-20 07:05:13] -rw-r--r-- 2 boincer umatlas 223096863 Apr 19 13:06 ATLAS.root_0
[2025-04-20 07:05:13] -rw-r--r-- 2 boincer umatlas    508897 Apr 19 13:06 input.tar.gz
[2025-04-20 07:05:13] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 13:06 start_atlas.sh
[2025-04-20 07:05:13] -rw------- 1 boincer umatlas 192358024 Apr 20 06:59 HITS.pool.root.1
[2025-04-20 07:05:13] -rw------- 1 boincer umatlas   5427200 Apr 20 07:05 result.tar.gz
07:05:14 (4915): run_atlas exited; CPU time 93798.334440
07:05:14 (4915): called boinc_finish(0)

</stderr_txt>
]]>

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