Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:32:30 (2431591): wrapper (7.7.26015): starting
13:32:30 (2431591): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 13:32:30] Arguments: --nthreads 9
[2025-04-19 13:32:30] Threads: 9
[2025-04-19 13:32:30] Checking for CVMFS
[2025-04-19 13:32:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 13:32:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 13:32:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 13:32:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 13:32:31] 2.12.6.0 1358637 37670 226572 145046 3 335 25932898 32935936 10880 130560 0 65241248 99.497 94308812 29024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 13:32:31] CVMFS is ok
[2025-04-19 13:32:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 13:32:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 13:32:31] Further information can be found at the LHC@home message board.
[2025-04-19 13:32:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 13:32:31] Checking for apptainer binary...
[2025-04-19 13:32:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 13:32:31] Running /usr/bin/apptainer --version
[2025-04-19 13:32:31] apptainer version 1.4.0-1.el9
[2025-04-19 13:32:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 13:32:31] c6-2-29-3.aglt2.org
[2025-04-19 13:32:31] apptainer works
[2025-04-19 13:32:31] Set ATHENA_PROC_NUMBER=9
[2025-04-19 13:32:31] Set ATHENA_CORE_NUMBER=9
[2025-04-19 13:32:31] Starting ATLAS job with PandaID=6607790615
[2025-04-19 13:32:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 16:07:18]  *** The last 200 lines of the pilot log: ***
[2025-04-19 16:07:18] 2025-04-19 20:07:02,148 | INFO     | sum of square deviations: 1088910768.7105308
[2025-04-19 16:07:18] 2025-04-19 20:07:02,149 | INFO     | sum of deviations: 50192010685.50007
[2025-04-19 16:07:18] 2025-04-19 20:07:02,149 | INFO     | mean x: 1745088603.5921052
[2025-04-19 16:07:18] 2025-04-19 20:07:02,149 | INFO     | mean y: 2132084.25
[2025-04-19 16:07:18] 2025-04-19 20:07:02,149 | INFO     | -- intersect: -80435593719.82236
[2025-04-19 16:07:18] 2025-04-19 20:07:02,149 | INFO     | intersect: -80435593719.82236
[2025-04-19 16:07:18] 2025-04-19 20:07:02,150 | INFO     | chi2: 4.552528271875354
[2025-04-19 16:07:18] 2025-04-19 20:07:02,150 | INFO     | sum of square deviations: 984950298.6666669
[2025-04-19 16:07:18] 2025-04-19 20:07:02,150 | INFO     | sum of deviations: 57329309220.6666
[2025-04-19 16:07:18] 2025-04-19 20:07:02,151 | INFO     | mean x: 1745088451.0952382
[2025-04-19 16:07:18] 2025-04-19 20:07:02,151 | INFO     | mean y: 2142197.095238095
[2025-04-19 16:07:18] 2025-04-19 20:07:02,151 | INFO     | -- intersect: -101571222028.1699
[2025-04-19 16:07:18] 2025-04-19 20:07:02,151 | INFO     | intersect: -101571222028.1699
[2025-04-19 16:07:18] 2025-04-19 20:07:02,151 | INFO     | chi2: 3.764445423430725
[2025-04-19 16:07:18] 2025-04-19 20:07:02,151 | INFO     | current chi2=3.764445423430725 (change=17.310883126487177 %)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,151 | INFO     | right removable region: 146
[2025-04-19 16:07:18] 2025-04-19 20:07:02,151 | INFO     | sum of square deviations: 984941758.6666669
[2025-04-19 16:07:18] 2025-04-19 20:07:02,152 | INFO     | sum of deviations: 19959790358.42855
[2025-04-19 16:07:18] 2025-04-19 20:07:02,152 | INFO     | mean x: 1745088756.0952382
[2025-04-19 16:07:18] 2025-04-19 20:07:02,152 | INFO     | mean y: 2176219.0408163266
[2025-04-19 16:07:18] 2025-04-19 20:07:02,152 | INFO     | -- intersect: -35361951072.77385
[2025-04-19 16:07:18] 2025-04-19 20:07:02,152 | INFO     | intersect: -35361951072.77385
[2025-04-19 16:07:18] 2025-04-19 20:07:02,152 | INFO     | chi2: 2.3755149140712994
[2025-04-19 16:07:18] 2025-04-19 20:07:02,152 | INFO     | current chi2=2.3755149140712994 (change=47.81987563379288 %)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,153 | INFO     | sum of square deviations: 887810086.1197218
[2025-04-19 16:07:18] 2025-04-19 20:07:02,153 | INFO     | sum of deviations: 720222983.7394361
[2025-04-19 16:07:18] 2025-04-19 20:07:02,153 | INFO     | mean x: 1745088908.5985916
[2025-04-19 16:07:18] 2025-04-19 20:07:02,153 | INFO     | mean y: 2206441.6971830986
[2025-04-19 16:07:18] 2025-04-19 20:07:02,153 | INFO     | -- intersect: -1413471483.448608
[2025-04-19 16:07:18] 2025-04-19 20:07:02,154 | INFO     | intersect: -1413471483.448608
[2025-04-19 16:07:18] 2025-04-19 20:07:02,154 | INFO     | chi2: 1.570494203549105
[2025-04-19 16:07:18] 2025-04-19 20:07:02,154 | INFO     | current chi2=1.570494203549105 (change=33.88826168817866 %)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,154 | INFO     | sum of square deviations: 797283188.5693413
[2025-04-19 16:07:18] 2025-04-19 20:07:02,155 | INFO     | sum of deviations: -13995989754.37226
[2025-04-19 16:07:18] 2025-04-19 20:07:02,155 | INFO     | mean x: 1745089061.1021898
[2025-04-19 16:07:18] 2025-04-19 20:07:02,155 | INFO     | mean y: 2231097.2408759124
[2025-04-19 16:07:18] 2025-04-19 20:07:02,155 | INFO     | -- intersect: 30636576546.66725
[2025-04-19 16:07:18] 2025-04-19 20:07:02,155 | INFO     | intersect: 30636576546.66725
[2025-04-19 16:07:18] 2025-04-19 20:07:02,155 | INFO     | chi2: 1.010781472012701
[2025-04-19 16:07:18] 2025-04-19 20:07:02,155 | INFO     | current chi2=1.010781472012701 (change=35.63927394775025 %)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,155 | INFO     | sum of square deviations: 713128503.5151511
[2025-04-19 16:07:18] 2025-04-19 20:07:02,156 | INFO     | sum of deviations: -14839594982.212116
[2025-04-19 16:07:18] 2025-04-19 20:07:02,156 | INFO     | mean x: 1745089213.6060605
[2025-04-19 16:07:18] 2025-04-19 20:07:02,156 | INFO     | mean y: 2232493.265151515
[2025-04-19 16:07:18] 2025-04-19 20:07:02,156 | INFO     | -- intersect: 36316048320.41613
[2025-04-19 16:07:18] 2025-04-19 20:07:02,156 | INFO     | intersect: 36316048320.41613
[2025-04-19 16:07:18] 2025-04-19 20:07:02,156 | INFO     | chi2: 0.968456939121781
[2025-04-19 16:07:18] 2025-04-19 20:07:02,156 | INFO     | current chi2=0.968456939121781 (change=4.187307945667237 %)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,157 | INFO     | left removable region: 40
[2025-04-19 16:07:18] 2025-04-19 20:07:02,157 | INFO     | sum of square deviations: 369287817.55660367
[2025-04-19 16:07:18] 2025-04-19 20:07:02,157 | INFO     | sum of deviations: 1778284639.8301888
[2025-04-19 16:07:18] 2025-04-19 20:07:02,157 | INFO     | mean x: 1745089640.5943396
[2025-04-19 16:07:18] 2025-04-19 20:07:02,157 | INFO     | mean y: 2230537.716981132
[2025-04-19 16:07:18] 2025-04-19 20:07:02,157 | INFO     | -- intersect: -8401150119.485545
[2025-04-19 16:07:18] 2025-04-19 20:07:02,157 | INFO     | intersect: -8401150119.485545
[2025-04-19 16:07:18] 2025-04-19 20:07:02,158 | INFO     | chi2: 0.03164818912018854
[2025-04-19 16:07:18] 2025-04-19 20:07:02,158 | INFO     | -- intersect: -8401150119.485545
[2025-04-19 16:07:18] 2025-04-19 20:07:02,158 | INFO     | current memory leak: 4.82 B/s (using 106 data points, chi2=0.03)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,158 | INFO     | ..............................
[2025-04-19 16:07:18] 2025-04-19 20:07:02,158 | INFO     | . Timing measurements:
[2025-04-19 16:07:18] 2025-04-19 20:07:02,158 | INFO     | . get job = 0 s
[2025-04-19 16:07:18] 2025-04-19 20:07:02,159 | INFO     | . initial setup = 2 s
[2025-04-19 16:07:18] 2025-04-19 20:07:02,159 | INFO     | . payload setup = 10 s
[2025-04-19 16:07:18] 2025-04-19 20:07:02,159 | INFO     | . stage-in = 0 s
[2025-04-19 16:07:18] 2025-04-19 20:07:02,159 | INFO     | . payload execution = 9218 s
[2025-04-19 16:07:18] 2025-04-19 20:07:02,159 | INFO     | . stage-out = 0 s
[2025-04-19 16:07:18] 2025-04-19 20:07:02,159 | INFO     | . log creation = 0 s
[2025-04-19 16:07:18] 2025-04-19 20:07:02,159 | INFO     | ..............................
[2025-04-19 16:07:18] 2025-04-19 20:07:02,240 | INFO     | 
[2025-04-19 16:07:18] 2025-04-19 20:07:02,240 | INFO     | job summary report
[2025-04-19 16:07:18] 2025-04-19 20:07:02,240 | INFO     | --------------------------------------------------
[2025-04-19 16:07:18] 2025-04-19 20:07:02,240 | INFO     | PanDA job id: 6607790615
[2025-04-19 16:07:18] 2025-04-19 20:07:02,240 | INFO     | task id: 44075483
[2025-04-19 16:07:18] 2025-04-19 20:07:02,240 | INFO     | errors: (none)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,240 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | pilot state: finished 
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | transexitcode: 0
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | exeerrorcode: 0
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | exeerrordiag: 
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | exitcode: 0
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | exitmsg: OK
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | cpuconsumptiontime: 39616 s
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | nevents: 400
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | neventsw: 0
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | pid: 2443409
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | pgrp: 2443409
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | corecount: 9
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | event service: False
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | sizes: {0: 2426824, 6: 2427030, 11: 2427058, 9232: 2455314, 9233: 2464255, 9235: 2464311, 9240: 2464609}
[2025-04-19 16:07:18] 2025-04-19 20:07:02,241 | INFO     | --------------------------------------------------
[2025-04-19 16:07:18] 2025-04-19 20:07:02,242 | INFO     | 
[2025-04-19 16:07:18] 2025-04-19 20:07:02,242 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 16:07:18] 2025-04-19 20:07:02,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,260 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,260 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,260 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 16:07:18] 2025-04-19 20:07:02,261 | INFO     | job 6607790615 has completed (purged errors)
[2025-04-19 16:07:18] 2025-04-19 20:07:02,262 | INFO     | overall cleanup function is called
[2025-04-19 16:07:18] 2025-04-19 20:07:03,269 | INFO     | --- collectZombieJob: --- 10, [2443409]
[2025-04-19 16:07:18] 2025-04-19 20:07:03,269 | INFO     | zombie collector waiting for pid 2443409
[2025-04-19 16:07:18] 2025-04-19 20:07:03,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 16:07:18] 2025-04-19 20:07:03,269 | INFO     | collected zombie processes
[2025-04-19 16:07:18] 2025-04-19 20:07:03,269 | INFO     | will attempt to kill all subprocesses of pid=2443409
[2025-04-19 16:07:18] 2025-04-19 20:07:03,580 | INFO     | process IDs to be killed: [2443409] (in reverse order)
[2025-04-19 16:07:18] 2025-04-19 20:07:03,693 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 16:07:18] 2025-04-19 20:07:03,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 16:07:18] 2025-04-19 20:07:03,707 | INFO     | did not find any defunct processes belonging to 2443409
[2025-04-19 16:07:18] 2025-04-19 20:07:03,720 | INFO     | did not find any defunct processes belonging to 2443409
[2025-04-19 16:07:18] 2025-04-19 20:07:03,720 | INFO     | ready for new job
[2025-04-19 16:07:18] 2025-04-19 20:07:03,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 16:07:18] 2025-04-19 20:07:03,722 | INFO     | **************************************
[2025-04-19 16:07:18] 2025-04-19 20:07:03,722 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 16:07:18] 2025-04-19 20:07:03,722 | INFO     | **************************************
[2025-04-19 16:07:18] 2025-04-19 20:07:03,722 | INFO     | 
[2025-04-19 16:07:18] 2025-04-19 20:07:03,739 | INFO     | architecture information:
[2025-04-19 16:07:18] 2025-04-19 20:07:03,743 | INFO     | executing command: cat /etc/os-release
[2025-04-19 16:07:18] 2025-04-19 20:07:03,780 | INFO     | cat /etc/os-release:
[2025-04-19 16:07:18] NAME="CentOS Linux"
[2025-04-19 16:07:18] VERSION="7 (Core)"
[2025-04-19 16:07:18] ID="centos"
[2025-04-19 16:07:18] ID_LIKE="rhel fedora"
[2025-04-19 16:07:18] VERSION_ID="7"
[2025-04-19 16:07:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 16:07:18] ANSI_COLOR="0;31"
[2025-04-19 16:07:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 16:07:18] HOME_URL="https://www.centos.org/"
[2025-04-19 16:07:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 16:07:18] 
[2025-04-19 16:07:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 16:07:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 16:07:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 16:07:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 16:07:18] 
[2025-04-19 16:07:18] 2025-04-19 20:07:03,781 | INFO     | **************************************
[2025-04-19 16:07:18] 2025-04-19 20:07:04,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 16:07:18] 2025-04-19 20:07:04,300 | INFO     | sufficient remaining disk space (75244765184 B)
[2025-04-19 16:07:18] 2025-04-19 20:07:04,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 16:07:18] 2025-04-19 20:07:04,300 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 16:07:18] 2025-04-19 20:07:04,300 | INFO     | update_server=False
[2025-04-19 16:07:18] 2025-04-19 20:07:04,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 16:07:18] 2025-04-19 20:07:04,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 16:07:18] 2025-04-19 20:07:04,301 | INFO     | aborting loop
[2025-04-19 16:07:18] 2025-04-19 20:07:04,472 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 16:07:18] 2025-04-19 20:07:04,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 16:07:18] 2025-04-19 20:07:04,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 16:07:18] 2025-04-19 20:07:04,814 | INFO     | all data control threads have been joined
[2025-04-19 16:07:18] 2025-04-19 20:07:04,876 | INFO     | all job control threads have been joined
[2025-04-19 16:07:18] 2025-04-19 20:07:05,306 | INFO     | [job] job monitor thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:05,306 | INFO     | [job] retrieve thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:05,371 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:05,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 16:07:18] 2025-04-19 20:07:05,521 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:05,629 | INFO     | all payload control threads have been joined
[2025-04-19 16:07:18] 2025-04-19 20:07:05,819 | INFO     | [data] control thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:05,882 | INFO     | [job] control thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:05,889 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:06,021 | INFO     | [job] validate thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:06,137 | INFO     | [payload] validate_post thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:06,162 | INFO     | [payload] failed_post thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:06,279 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:06,327 | INFO     | [data] copytool_in thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:06,635 | INFO     | [payload] control thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:07,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 16:07:18] 2025-04-19 20:07:07,448 | INFO     | [data] copytool_out thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:07,468 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 16:07:18] 2025-04-19 20:07:08,259 | INFO     | [job] queue monitor thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:11,474 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 16:07:18] 2025-04-19 20:07:13,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192436717376)>', '<ExcThread(monitor, started 140191809394432)>']
[2025-04-19 16:07:18] 2025-04-19 20:07:13,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 16:07:18] 2025-04-19 20:07:13,517 | INFO     | [monitor] control thread has ended
[2025-04-19 16:07:18] 2025-04-19 20:07:18,392 | INFO     | all workflow threads have been joined
[2025-04-19 16:07:18] 2025-04-19 20:07:18,392 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 16:07:18] 2025-04-19 20:07:18,392 | INFO     | traces error code: 0
[2025-04-19 16:07:18] 2025-04-19 20:07:18,393 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 16:07:18] 2025-04-19 20:07:18,561 [wrapper] ==== pilot stdout END ====
[2025-04-19 16:07:18] 2025-04-19 20:07:18,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 16:07:18] 2025-04-19 20:07:18,568 [wrapper] pilotpid: 2435489
[2025-04-19 16:07:18] 2025-04-19 20:07:18,571 [wrapper] Pilot exit status: 0
[2025-04-19 16:07:18] 2025-04-19 20:07:18,583 [wrapper] pandaids: 6607790615
[2025-04-19 16:07:18] 2025-04-19 20:07:18,654 [wrapper] cleanup supervisor_pilot 3135497 2435490
[2025-04-19 16:07:18] 2025-04-19 20:07:18,659 [wrapper] Test setup, not cleaning
[2025-04-19 16:07:18] 2025-04-19 20:07:18,662 [wrapper] apfmon messages muted
[2025-04-19 16:07:18] 2025-04-19 20:07:18,665 [wrapper] ==== wrapper stdout END ====
[2025-04-19 16:07:18] 2025-04-19 20:07:18,668 [wrapper] ==== wrapper stderr END ====
[2025-04-19 16:07:18]  *** Error codes and diagnostics ***
[2025-04-19 16:07:18]     "exeErrorCode": 0,
[2025-04-19 16:07:18]     "exeErrorDiag": "",
[2025-04-19 16:07:18]     "pilotErrorCode": 0,
[2025-04-19 16:07:18]     "pilotErrorDiag": "",
[2025-04-19 16:07:18]  *** Listing of results directory ***
[2025-04-19 16:07:18] total 414908
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 09:48 pilot3.tar.gz
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 09:53 queuedata.json
[2025-04-19 16:07:18] -rwx------. 1 boincer umatlas     37140 Apr 19 09:53 runpilot2-wrapper.sh
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas       100 Apr 19 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 16:07:18] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 13:32 run_atlas
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas       105 Apr 19 13:32 job.xml
[2025-04-19 16:07:18] -rw-r--r--. 2 boincer umatlas 224610603 Apr 19 13:32 EVNT.44075481._003246.pool.root.1
[2025-04-19 16:07:18] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 13:32 start_atlas.sh
[2025-04-19 16:07:18] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 13:32 shared
[2025-04-19 16:07:18] -rw-r--r--. 2 boincer umatlas    508889 Apr 19 13:32 input.tar.gz
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas         0 Apr 19 13:32 boinc_lockfile
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas      2579 Apr 19 13:32 pandaJob.out
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas       467 Apr 19 13:32 setup.sh.local
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas    991244 Apr 19 13:32 agis_schedconf.cvmfs.json
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas   1618536 Apr 19 13:32 agis_ddmendpoints.agis.ALL.json
[2025-04-19 16:07:18] drwx------. 4 boincer umatlas      4096 Apr 19 13:32 pilot3
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas      6856 Apr 19 16:03 init_data.xml
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas 193911089 Apr 19 16:06 HITS.44075483._083714.pool.root.1
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas        95 Apr 19 16:06 pilot_heartbeat.json
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas       529 Apr 19 16:06 boinc_task_state.xml
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas      1036 Apr 19 16:06 memory_monitor_summary.json
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas    381595 Apr 19 16:06 log.44075483._083714.job.log.tgz.1
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas      7713 Apr 19 16:07 heartbeat.json
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 16:07 boinc_mmap_file
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas        27 Apr 19 16:07 wrapper_checkpoint.txt
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas      4353 Apr 19 16:07 pilotlog.txt
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas    853860 Apr 19 16:07 log.44075483._083714.job.log.1
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas       357 Apr 19 16:07 output.list
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas       620 Apr 19 16:07 runtime_log
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas   1259520 Apr 19 16:07 result.tar.gz
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas     11423 Apr 19 16:07 runtime_log.err
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas       653 Apr 19 16:07 KpFLDmdoNQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm14hLDm977UCn.diag
[2025-04-19 16:07:18] -rw-r--r--. 1 boincer umatlas     20771 Apr 19 16:07 stderr.txt
[2025-04-19 16:07:18] HITS file was successfully produced:
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas 193911089 Apr 19 16:06 shared/HITS.pool.root.1
[2025-04-19 16:07:18]  *** Contents of shared directory: ***
[2025-04-19 16:07:18] total 410472
[2025-04-19 16:07:18] -rw-r--r--. 2 boincer umatlas 224610603 Apr 19 13:32 ATLAS.root_0
[2025-04-19 16:07:18] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 13:32 start_atlas.sh
[2025-04-19 16:07:18] -rw-r--r--. 2 boincer umatlas    508889 Apr 19 13:32 input.tar.gz
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas 193911089 Apr 19 16:06 HITS.pool.root.1
[2025-04-19 16:07:18] -rw-------. 1 boincer umatlas   1259520 Apr 19 16:07 result.tar.gz
16:07:20 (2431591): run_atlas exited; CPU time 39812.331781
16:07:20 (2431591): called boinc_finish(0)

</stderr_txt>
]]>

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