Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:34:21 (31042): wrapper (7.7.26015): starting
12:34:21 (31042): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 12:34:21] Arguments: --nthreads 12
[2025-04-19 12:34:21] Threads: 12
[2025-04-19 12:34:21] Checking for CVMFS
[2025-04-19 12:34:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 12:34:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 12:34:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 12:34:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 12:34:21] 2.11.2.0 5277 369706 165864 145045 2 58 11083155 20275200 1 130560 0 24594015 99.953 8150910 52832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 12:34:21] CVMFS is ok
[2025-04-19 12:34:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 12:34:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 12:34:21] Further information can be found at the LHC@home message board.
[2025-04-19 12:34:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 12:34:21] Checking for apptainer binary...
[2025-04-19 12:34:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 12:34:21] Running /usr/bin/apptainer --version
[2025-04-19 12:34:21] apptainer version 1.3.2-1.el7
[2025-04-19 12:34:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 12:34:23] c-205-15.aglt2.org
[2025-04-19 12:34:23] apptainer works
[2025-04-19 12:34:23] Set ATHENA_PROC_NUMBER=12
[2025-04-19 12:34:23] Set ATHENA_CORE_NUMBER=12
[2025-04-19 12:34:23] Starting ATLAS job with PandaID=6607790600
[2025-04-19 12:34:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 13:57:40]  *** The last 200 lines of the pilot log: ***
[2025-04-19 13:57:40]  is_tar=False
[2025-04-19 13:57:40]  lfn=log.44075483._083699.job.log.tgz.1
[2025-04-19 13:57:40]  mtime=0
[2025-04-19 13:57:40]  protocol_id=None
[2025-04-19 13:57:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 13:57:40]  replicas=None
[2025-04-19 13:57:40]  scope=mc23_13p6TeV
[2025-04-19 13:57:40]  status=None
[2025-04-19 13:57:40]  status_code=0
[2025-04-19 13:57:40]  storage_token=
[2025-04-19 13:57:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6607790600/log.44075483._083699.job.log.tgz.1
[2025-04-19 13:57:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/d0/log.44075483._083699.job.log.tgz.1
[2025-04-19 13:57:40]  workdir=None
[2025-04-19 13:57:40] ]
[2025-04-19 13:57:40] 2025-04-19 17:57:13,026 | INFO     | transferring file log.44075483._083699.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607790600/log.44075483._083699.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 13:57:40] 2025-04-19 17:57:13,026 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607790600/log.44075483._083699.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._083699.job
[2025-04-19 13:57:40] 2025-04-19 17:57:13,049 | INFO     | adding to output.list: log.44075483._083699.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/d0/log.44075483._083699.job.log.tg
[2025-04-19 13:57:40] 2025-04-19 17:57:13,050 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 13:57:40] 2025-04-19 17:57:13,050 | INFO     | summary of transferred files:
[2025-04-19 13:57:40] 2025-04-19 17:57:13,051 | INFO     |  -- lfn=log.44075483._083699.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 13:57:40] 2025-04-19 17:57:13,051 | INFO     | stage-out finished correctly
[2025-04-19 13:57:40] 2025-04-19 17:57:14,002 | WARNING  | process 8715 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 13:57:40] 2025-04-19 17:57:14,002 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607790600/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 13:57:40] 2025-04-19 17:57:14,089 | INFO     | number of running child processes to parent process 8715: 1
[2025-04-19 13:57:40] 2025-04-19 17:57:14,089 | INFO     | maximum number of monitored processes: 6
[2025-04-19 13:57:40] 2025-04-19 17:57:14,090 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 13:57:40] 2025-04-19 17:57:15,669 | INFO     | job 6607790600 has state=finished
[2025-04-19 13:57:40] 2025-04-19 17:57:15,669 | INFO     | preparing for final server update for job 6607790600 in state='finished'
[2025-04-19 13:57:40] 2025-04-19 17:57:15,670 | INFO     | this job has now completed (state=finished)
[2025-04-19 13:57:40] 2025-04-19 17:57:15,670 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 13:57:40] 2025-04-19 17:57:15,670 | INFO     | log transfer has been attempted: DONE
[2025-04-19 13:57:40] 2025-04-19 17:57:15,670 | INFO     | job 6607790600 has finished - writing final server update
[2025-04-19 13:57:40] 2025-04-19 17:57:15,671 | INFO     | total number of processed events: 400 (read)
[2025-04-19 13:57:40] 2025-04-19 17:57:15,672 | INFO     | executing command: lscpu
[2025-04-19 13:57:40] 2025-04-19 17:57:15,701 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 13:57:40] 2025-04-19 17:57:16,592 | INFO     | monitor loop #370: job 0:6607790600 is in state 'finished'
[2025-04-19 13:57:40] 2025-04-19 17:57:16,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 13:57:40] 2025-04-19 17:57:19,095 | INFO     | monitor loop #371: job 0:6607790600 is in state 'finished'
[2025-04-19 13:57:40] 2025-04-19 17:57:19,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 13:57:40] 2025-04-19 17:57:20,378 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 13:57:40] 2025-04-19 17:57:20,378 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607790600/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 13:57:40] 2025-04-19 17:57:20,379 | INFO     | extracted standard info from prmon json
[2025-04-19 13:57:40] 2025-04-19 17:57:20,379 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 13:57:40] 2025-04-19 17:57:20,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 13:57:40] 2025-04-19 17:57:20,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 13:57:40] 2025-04-19 17:57:20,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 13:57:40] 2025-04-19 17:57:20,383 | INFO     | fitting pss+swap vs Time
[2025-04-19 13:57:40] 2025-04-19 17:57:20,383 | INFO     | sum of square deviations: 125630262.5
[2025-04-19 13:57:40] 2025-04-19 17:57:20,384 | INFO     | sum of deviations: 17782463128.999996
[2025-04-19 13:57:40] 2025-04-19 17:57:20,384 | INFO     | mean x: 1745083037.5
[2025-04-19 13:57:40] 2025-04-19 17:57:20,384 | INFO     | mean y: 2606549.5675675673
[2025-04-19 13:57:40] 2025-04-19 17:57:20,384 | INFO     | -- intersect: -247006944762.85663
[2025-04-19 13:57:40] 2025-04-19 17:57:20,385 | INFO     | intersect: -247006944762.85663
[2025-04-19 13:57:40] 2025-04-19 17:57:20,385 | INFO     | chi2: 2.2724165694402476
[2025-04-19 13:57:40] 2025-04-19 17:57:20,385 | INFO     | -- intersect: -247006944762.85663
[2025-04-19 13:57:40] 2025-04-19 17:57:20,385 | INFO     | current memory leak: 141.55 B/s (using 74 data points, chi2=2.27)
[2025-04-19 13:57:40] 2025-04-19 17:57:20,386 | INFO     | ..............................
[2025-04-19 13:57:40] 2025-04-19 17:57:20,386 | INFO     | . Timing measurements:
[2025-04-19 13:57:40] 2025-04-19 17:57:20,386 | INFO     | . get job = 0 s
[2025-04-19 13:57:40] 2025-04-19 17:57:20,386 | INFO     | . initial setup = 2 s
[2025-04-19 13:57:40] 2025-04-19 17:57:20,387 | INFO     | . payload setup = 7 s
[2025-04-19 13:57:40] 2025-04-19 17:57:20,387 | INFO     | . stage-in = 0 s
[2025-04-19 13:57:40] 2025-04-19 17:57:20,387 | INFO     | . payload execution = 4927 s
[2025-04-19 13:57:40] 2025-04-19 17:57:20,387 | INFO     | . stage-out = 0 s
[2025-04-19 13:57:40] 2025-04-19 17:57:20,387 | INFO     | . log creation = 0 s
[2025-04-19 13:57:40] 2025-04-19 17:57:20,387 | INFO     | ..............................
[2025-04-19 13:57:40] 2025-04-19 17:57:20,473 | INFO     | 
[2025-04-19 13:57:40] 2025-04-19 17:57:20,473 | INFO     | job summary report
[2025-04-19 13:57:40] 2025-04-19 17:57:20,473 | INFO     | --------------------------------------------------
[2025-04-19 13:57:40] 2025-04-19 17:57:20,473 | INFO     | PanDA job id: 6607790600
[2025-04-19 13:57:40] 2025-04-19 17:57:20,474 | INFO     | task id: 44075483
[2025-04-19 13:57:40] 2025-04-19 17:57:20,474 | INFO     | errors: (none)
[2025-04-19 13:57:40] 2025-04-19 17:57:20,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 13:57:40] 2025-04-19 17:57:20,474 | INFO     | pilot state: finished 
[2025-04-19 13:57:40] 2025-04-19 17:57:20,474 | INFO     | transexitcode: 0
[2025-04-19 13:57:40] 2025-04-19 17:57:20,474 | INFO     | exeerrorcode: 0
[2025-04-19 13:57:40] 2025-04-19 17:57:20,475 | INFO     | exeerrordiag: 
[2025-04-19 13:57:40] 2025-04-19 17:57:20,475 | INFO     | exitcode: 0
[2025-04-19 13:57:40] 2025-04-19 17:57:20,475 | INFO     | exitmsg: OK
[2025-04-19 13:57:40] 2025-04-19 17:57:20,475 | INFO     | cpuconsumptiontime: 46521 s
[2025-04-19 13:57:40] 2025-04-19 17:57:20,475 | INFO     | nevents: 400
[2025-04-19 13:57:40] 2025-04-19 17:57:20,475 | INFO     | neventsw: 0
[2025-04-19 13:57:40] 2025-04-19 17:57:20,476 | INFO     | pid: 8715
[2025-04-19 13:57:40] 2025-04-19 17:57:20,476 | INFO     | pgrp: 8715
[2025-04-19 13:57:40] 2025-04-19 17:57:20,476 | INFO     | corecount: 12
[2025-04-19 13:57:40] 2025-04-19 17:57:20,476 | INFO     | event service: False
[2025-04-19 13:57:40] 2025-04-19 17:57:20,476 | INFO     | sizes: {0: 2426823, 5: 2427029, 11: 2427085, 4938: 2453183, 4940: 2462124, 4941: 2462180, 4948: 2462478}
[2025-04-19 13:57:40] 2025-04-19 17:57:20,477 | INFO     | --------------------------------------------------
[2025-04-19 13:57:40] 2025-04-19 17:57:20,477 | INFO     | 
[2025-04-19 13:57:40] 2025-04-19 17:57:20,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 13:57:40] 2025-04-19 17:57:20,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 13:57:40] 2025-04-19 17:57:20,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 13:57:40] 2025-04-19 17:57:20,502 | INFO     | job 6607790600 has completed (purged errors)
[2025-04-19 13:57:40] 2025-04-19 17:57:20,502 | INFO     | overall cleanup function is called
[2025-04-19 13:57:40] 2025-04-19 17:57:21,510 | INFO     | --- collectZombieJob: --- 10, [8715]
[2025-04-19 13:57:40] 2025-04-19 17:57:21,510 | INFO     | zombie collector waiting for pid 8715
[2025-04-19 13:57:40] 2025-04-19 17:57:21,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 13:57:40] 2025-04-19 17:57:21,511 | INFO     | collected zombie processes
[2025-04-19 13:57:40] 2025-04-19 17:57:21,511 | INFO     | will attempt to kill all subprocesses of pid=8715
[2025-04-19 13:57:40] 2025-04-19 17:57:21,603 | INFO     | process IDs to be killed: [8715] (in reverse order)
[2025-04-19 13:57:40] 2025-04-19 17:57:21,656 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 13:57:40] 2025-04-19 17:57:21,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 13:57:40] 2025-04-19 17:57:21,659 | INFO     | did not find any defunct processes belonging to 8715
[2025-04-19 13:57:40] 2025-04-19 17:57:21,661 | INFO     | did not find any defunct processes belonging to 8715
[2025-04-19 13:57:40] 2025-04-19 17:57:21,661 | INFO     | ready for new job
[2025-04-19 13:57:40] 2025-04-19 17:57:21,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 13:57:40] 2025-04-19 17:57:21,663 | INFO     | **************************************
[2025-04-19 13:57:40] 2025-04-19 17:57:21,663 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 13:57:40] 2025-04-19 17:57:21,663 | INFO     | **************************************
[2025-04-19 13:57:40] 2025-04-19 17:57:21,663 | INFO     | 
[2025-04-19 13:57:40] 2025-04-19 17:57:21,664 | INFO     | architecture information:
[2025-04-19 13:57:40] 2025-04-19 17:57:21,664 | INFO     | executing command: cat /etc/os-release
[2025-04-19 13:57:40] 2025-04-19 17:57:21,679 | INFO     | cat /etc/os-release:
[2025-04-19 13:57:40] NAME="CentOS Linux"
[2025-04-19 13:57:40] VERSION="7 (Core)"
[2025-04-19 13:57:40] ID="centos"
[2025-04-19 13:57:40] ID_LIKE="rhel fedora"
[2025-04-19 13:57:40] VERSION_ID="7"
[2025-04-19 13:57:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 13:57:40] ANSI_COLOR="0;31"
[2025-04-19 13:57:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 13:57:40] HOME_URL="https://www.centos.org/"
[2025-04-19 13:57:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 13:57:40] 
[2025-04-19 13:57:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 13:57:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 13:57:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 13:57:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 13:57:40] 
[2025-04-19 13:57:40] 2025-04-19 17:57:21,679 | INFO     | **************************************
[2025-04-19 13:57:40] 2025-04-19 17:57:22,182 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 13:57:40] 2025-04-19 17:57:22,198 | INFO     | sufficient remaining disk space (29389488128 B)
[2025-04-19 13:57:40] 2025-04-19 17:57:22,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 13:57:40] 2025-04-19 17:57:22,199 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 13:57:40] 2025-04-19 17:57:22,199 | INFO     | update_server=False
[2025-04-19 13:57:40] 2025-04-19 17:57:22,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 13:57:40] 2025-04-19 17:57:22,200 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 13:57:40] 2025-04-19 17:57:22,200 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 13:57:40] 2025-04-19 17:57:22,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 13:57:40] 2025-04-19 17:57:22,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 13:57:40] 2025-04-19 17:57:22,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 13:57:40] 2025-04-19 17:57:22,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 13:57:40] 2025-04-19 17:57:22,600 | INFO     | aborting loop
[2025-04-19 13:57:40] 2025-04-19 17:57:22,725 | INFO     | all job control threads have been joined
[2025-04-19 13:57:40] 2025-04-19 17:57:23,054 | INFO     | all data control threads have been joined
[2025-04-19 13:57:40] 2025-04-19 17:57:23,205 | INFO     | [job] retrieve thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:23,206 | INFO     | [job] queue monitor thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:23,412 | INFO     | [payload] validate_post thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:23,610 | INFO     | [job] job monitor thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:23,614 | INFO     | [job] validate thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:23,651 | INFO     | all payload control threads have been joined
[2025-04-19 13:57:40] 2025-04-19 17:57:23,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 13:57:40] 2025-04-19 17:57:23,731 | INFO     | [job] control thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:23,891 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:23,955 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:23,968 | INFO     | [payload] failed_post thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:24,060 | INFO     | [data] control thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:24,142 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:24,525 | INFO     | [data] copytool_in thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:24,656 | INFO     | [payload] control thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:24,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 13:57:40] 2025-04-19 17:57:25,657 | INFO     | [data] copytool_out thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:28,690 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:32,239 | INFO     | job.realtimelogging is not enabled
[2025-04-19 13:57:40] 2025-04-19 17:57:33,244 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 13:57:40] 2025-04-19 17:57:34,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140028931594048)>', '<ExcThread(monitor, started 140028265092864)>']
[2025-04-19 13:57:40] 2025-04-19 17:57:35,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 13:57:40] 2025-04-19 17:57:35,250 | INFO     | [monitor] control thread has ended
[2025-04-19 13:57:40] 2025-04-19 17:57:39,771 | INFO     | all workflow threads have been joined
[2025-04-19 13:57:40] 2025-04-19 17:57:39,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 13:57:40] 2025-04-19 17:57:39,772 | INFO     | traces error code: 0
[2025-04-19 13:57:40] 2025-04-19 17:57:39,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 13:57:40] 2025-04-19 17:57:39,864 [wrapper] ==== pilot stdout END ====
[2025-04-19 13:57:40] 2025-04-19 17:57:39,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 13:57:40] 2025-04-19 17:57:39,872 [wrapper] pilotpid: 2333
[2025-04-19 13:57:40] 2025-04-19 17:57:39,876 [wrapper] Pilot exit status: 0
[2025-04-19 13:57:40] 2025-04-19 17:57:39,892 [wrapper] pandaids: 6607790600
[2025-04-19 13:57:40] 2025-04-19 17:57:39,932 [wrapper] cleanup supervisor_pilot 28122 2334
[2025-04-19 13:57:40] 2025-04-19 17:57:39,936 [wrapper] Test setup, not cleaning
[2025-04-19 13:57:40] 2025-04-19 17:57:39,940 [wrapper] apfmon messages muted
[2025-04-19 13:57:40] 2025-04-19 17:57:39,944 [wrapper] ==== wrapper stdout END ====
[2025-04-19 13:57:40] 2025-04-19 17:57:39,948 [wrapper] ==== wrapper stderr END ====
[2025-04-19 13:57:40]  *** Error codes and diagnostics ***
[2025-04-19 13:57:40]     "exeErrorCode": 0,
[2025-04-19 13:57:40]     "exeErrorDiag": "",
[2025-04-19 13:57:40]     "pilotErrorCode": 0,
[2025-04-19 13:57:40]     "pilotErrorDiag": "",
[2025-04-19 13:57:40]  *** Listing of results directory ***
[2025-04-19 13:57:40] total 422020
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 09:48 pilot3.tar.gz
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 09:53 queuedata.json
[2025-04-19 13:57:40] -rwx------ 1 boincer umatlas     37140 Apr 19 09:53 runpilot2-wrapper.sh
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas       100 Apr 19 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 13:57:40] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 12:34 run_atlas
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas       105 Apr 19 12:34 job.xml
[2025-04-19 13:57:40] -rw-r--r-- 2 boincer umatlas    508890 Apr 19 12:34 input.tar.gz
[2025-04-19 13:57:40] -rw-r--r-- 2 boincer umatlas 224610603 Apr 19 12:34 EVNT.44075481._003246.pool.root.1
[2025-04-19 13:57:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 12:34 start_atlas.sh
[2025-04-19 13:57:40] drwxrwx--x 2 boincer umatlas      4096 Apr 19 12:34 shared
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas         0 Apr 19 12:34 boinc_lockfile
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 12:34 pandaJob.out
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas       424 Apr 19 12:34 setup.sh.local
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas    991268 Apr 19 12:34 agis_schedconf.cvmfs.json
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas   1618536 Apr 19 12:34 agis_ddmendpoints.agis.ALL.json
[2025-04-19 13:57:40] drwx------ 4 boincer umatlas      4096 Apr 19 12:34 pilot3
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas      5867 Apr 19 13:55 init_data.xml
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas        95 Apr 19 13:56 pilot_heartbeat.json
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas 202009245 Apr 19 13:56 HITS.44075483._083699.pool.root.1
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas       529 Apr 19 13:56 boinc_task_state.xml
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas      1047 Apr 19 13:57 memory_monitor_summary.json
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas    362364 Apr 19 13:57 log.44075483._083699.job.log.tgz.1
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas      7753 Apr 19 13:57 heartbeat.json
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 13:57 boinc_mmap_file
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas        27 Apr 19 13:57 wrapper_checkpoint.txt
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas      4548 Apr 19 13:57 pilotlog.txt
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas    470215 Apr 19 13:57 log.44075483._083699.job.log.1
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas       357 Apr 19 13:57 output.list
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas       620 Apr 19 13:57 runtime_log
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas    849920 Apr 19 13:57 result.tar.gz
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 13:57 runtime_log.err
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas       658 Apr 19 13:57 6VmKDmdoNQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmo4hLDmLDbgkn.diag
[2025-04-19 13:57:40] -rw-r--r-- 1 boincer umatlas     21471 Apr 19 13:57 stderr.txt
[2025-04-19 13:57:40] HITS file was successfully produced:
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas 202009245 Apr 19 13:56 shared/HITS.pool.root.1
[2025-04-19 13:57:40]  *** Contents of shared directory: ***
[2025-04-19 13:57:40] total 417980
[2025-04-19 13:57:40] -rw-r--r-- 2 boincer umatlas    508890 Apr 19 12:34 input.tar.gz
[2025-04-19 13:57:40] -rw-r--r-- 2 boincer umatlas 224610603 Apr 19 12:34 ATLAS.root_0
[2025-04-19 13:57:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 12:34 start_atlas.sh
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas 202009245 Apr 19 13:56 HITS.pool.root.1
[2025-04-19 13:57:40] -rw------- 1 boincer umatlas    849920 Apr 19 13:57 result.tar.gz
13:57:41 (31042): run_atlas exited; CPU time 46504.599207
13:57:41 (31042): called boinc_finish(0)

</stderr_txt>
]]>

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