Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:44:35 (2028202): wrapper (7.7.26015): starting
13:44:35 (2028202): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 13:44:35] Arguments: --nthreads 9
[2025-04-19 13:44:35] Threads: 9
[2025-04-19 13:44:35] Checking for CVMFS
[2025-04-19 13:44:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 13:44:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 13:44:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 13:44:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 13:44:56] 2.12.6.0 47205 43132 273524 145046 1 372 20956476 32935937 11250 130560 0 67004011 99.483 89769170 27932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 13:44:56] CVMFS is ok
[2025-04-19 13:44:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 13:44:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 13:44:56] Further information can be found at the LHC@home message board.
[2025-04-19 13:44:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 13:44:56] Checking for apptainer binary...
[2025-04-19 13:44:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 13:44:56] Running /usr/bin/apptainer --version
[2025-04-19 13:44:56] apptainer version 1.4.0-1.el9
[2025-04-19 13:44:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 13:44:56] c6-5-7-4.aglt2.org
[2025-04-19 13:44:56] apptainer works
[2025-04-19 13:44:56] Set ATHENA_PROC_NUMBER=9
[2025-04-19 13:44:56] Set ATHENA_CORE_NUMBER=9
[2025-04-19 13:44:57] Starting ATLAS job with PandaID=6607790578
[2025-04-19 13:44:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 15:25:35]  *** The last 200 lines of the pilot log: ***
[2025-04-19 15:25:35]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6607790578/log.44075483._083677.job.log.tgz.1
[2025-04-19 15:25:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/2f/log.44075483._083677.job.log.tgz.1
[2025-04-19 15:25:35]  workdir=None
[2025-04-19 15:25:35] ]
[2025-04-19 15:25:35] 2025-04-19 19:25:02,293 | INFO     | transferring file log.44075483._083677.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6607790578/log.44075483._083677.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 15:25:35] 2025-04-19 19:25:02,293 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6607790578/log.44075483._083677.job.log.tgz.1 /tmp/boinchome/slots/1/log.44075483._083677.job
[2025-04-19 15:25:35] 2025-04-19 19:25:02,344 | INFO     | adding to output.list: log.44075483._083677.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/2f/log.44075483._083677.job.log.tg
[2025-04-19 15:25:35] 2025-04-19 19:25:02,347 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 15:25:35] 2025-04-19 19:25:02,347 | INFO     | summary of transferred files:
[2025-04-19 15:25:35] 2025-04-19 19:25:02,347 | INFO     |  -- lfn=log.44075483._083677.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 15:25:35] 2025-04-19 19:25:02,347 | INFO     | stage-out finished correctly
[2025-04-19 15:25:35] 2025-04-19 19:25:02,984 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 15:25:35] 2025-04-19 19:25:03,671 | INFO     | job 6607790578 has state=finished
[2025-04-19 15:25:35] 2025-04-19 19:25:03,672 | INFO     | preparing for final server update for job 6607790578 in state='finished'
[2025-04-19 15:25:35] 2025-04-19 19:25:03,672 | INFO     | this job has now completed (state=finished)
[2025-04-19 15:25:35] 2025-04-19 19:25:03,672 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 15:25:35] 2025-04-19 19:25:03,672 | INFO     | log transfer has been attempted: DONE
[2025-04-19 15:25:35] 2025-04-19 19:25:03,672 | INFO     | job 6607790578 has finished - writing final server update
[2025-04-19 15:25:35] 2025-04-19 19:25:03,673 | INFO     | total number of processed events: 400 (read)
[2025-04-19 15:25:35] 2025-04-19 19:25:03,685 | INFO     | executing command: lscpu
[2025-04-19 15:25:35] 2025-04-19 19:25:03,953 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 15:25:35] 2025-04-19 19:25:04,687 | WARNING  | process 2045754 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 15:25:35] 2025-04-19 19:25:04,688 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6607790578/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 15:25:35] 2025-04-19 19:25:04,693 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3522823 B
[2025-04-19 15:25:35] 2025-04-19 19:25:04,693 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15546 B
[2025-04-19 15:25:35] 2025-04-19 19:25:04,694 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 15:25:35] 2025-04-19 19:25:13,066 | INFO     | 5982s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 15:25:35] 2025-04-19 19:25:14,634 | INFO     | PID=2035932 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 15:25:35] 2025-04-19 19:25:14,635 | INFO     | .. there are 17 such processes running
[2025-04-19 15:25:35] 2025-04-19 19:25:15,143 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-19 15:25:35] 2025-04-19 19:25:15,144 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6607790578/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,144 | INFO     | extracted standard info from prmon json
[2025-04-19 15:25:35] 2025-04-19 19:25:15,144 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 15:25:35] 2025-04-19 19:25:15,144 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 15:25:35] 2025-04-19 19:25:15,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 15:25:35] 2025-04-19 19:25:15,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 15:25:35] 2025-04-19 19:25:15,147 | INFO     | fitting pss+swap vs Time
[2025-04-19 15:25:35] 2025-04-19 19:25:15,147 | INFO     | sum of square deviations: 226022842.5
[2025-04-19 15:25:35] 2025-04-19 19:25:15,148 | INFO     | sum of deviations: 26108872635.5
[2025-04-19 15:25:35] 2025-04-19 19:25:15,148 | INFO     | mean x: 1745087827.5
[2025-04-19 15:25:35] 2025-04-19 19:25:15,148 | INFO     | mean y: 2102949.8777777776
[2025-04-19 15:25:35] 2025-04-19 19:25:15,148 | INFO     | -- intersect: -201580512868.95874
[2025-04-19 15:25:35] 2025-04-19 19:25:15,148 | INFO     | intersect: -201580512868.95874
[2025-04-19 15:25:35] 2025-04-19 19:25:15,150 | INFO     | chi2: 1.6052894353173266
[2025-04-19 15:25:35] 2025-04-19 19:25:15,150 | INFO     | -- intersect: -201580512868.95874
[2025-04-19 15:25:35] 2025-04-19 19:25:15,151 | INFO     | current memory leak: 115.51 B/s (using 90 data points, chi2=1.61)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,151 | INFO     | ..............................
[2025-04-19 15:25:35] 2025-04-19 19:25:15,151 | INFO     | . Timing measurements:
[2025-04-19 15:25:35] 2025-04-19 19:25:15,151 | INFO     | . get job = 0 s
[2025-04-19 15:25:35] 2025-04-19 19:25:15,151 | INFO     | . initial setup = 3 s
[2025-04-19 15:25:35] 2025-04-19 19:25:15,151 | INFO     | . payload setup = 19 s
[2025-04-19 15:25:35] 2025-04-19 19:25:15,151 | INFO     | . stage-in = 0 s
[2025-04-19 15:25:35] 2025-04-19 19:25:15,152 | INFO     | . payload execution = 5905 s
[2025-04-19 15:25:35] 2025-04-19 19:25:15,152 | INFO     | . stage-out = 1 s
[2025-04-19 15:25:35] 2025-04-19 19:25:15,152 | INFO     | . log creation = 0 s
[2025-04-19 15:25:35] 2025-04-19 19:25:15,152 | INFO     | ..............................
[2025-04-19 15:25:35] 2025-04-19 19:25:15,214 | INFO     | sufficient remaining disk space (75236376576 B)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,214 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,215 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6607790578: 3828653 B (within 2537553920 B limit)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,215 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6607790578/HITS.44075483._083677.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,215 | INFO     | total size of present files: 0 B (workdir size: 3828653 B)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,215 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6607790578/HITS.44075483._083677.pool.root.1 since it does not exist
[2025-04-19 15:25:35] 2025-04-19 19:25:15,258 | INFO     | 
[2025-04-19 15:25:35] 2025-04-19 19:25:15,262 | INFO     | job summary report
[2025-04-19 15:25:35] 2025-04-19 19:25:15,262 | INFO     | --------------------------------------------------
[2025-04-19 15:25:35] 2025-04-19 19:25:15,263 | INFO     | PanDA job id: 6607790578
[2025-04-19 15:25:35] 2025-04-19 19:25:15,263 | INFO     | task id: 44075483
[2025-04-19 15:25:35] 2025-04-19 19:25:15,263 | INFO     | errors: (none)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 15:25:35] 2025-04-19 19:25:15,263 | INFO     | pilot state: finished 
[2025-04-19 15:25:35] 2025-04-19 19:25:15,263 | INFO     | transexitcode: 0
[2025-04-19 15:25:35] 2025-04-19 19:25:15,263 | INFO     | exeerrorcode: 0
[2025-04-19 15:25:35] 2025-04-19 19:25:15,263 | INFO     | exeerrordiag: 
[2025-04-19 15:25:35] 2025-04-19 19:25:15,264 | INFO     | exitcode: 0
[2025-04-19 15:25:35] 2025-04-19 19:25:15,264 | INFO     | exitmsg: OK
[2025-04-19 15:25:35] 2025-04-19 19:25:15,264 | INFO     | cpuconsumptiontime: 35930 s
[2025-04-19 15:25:35] 2025-04-19 19:25:15,264 | INFO     | nevents: 400
[2025-04-19 15:25:35] 2025-04-19 19:25:15,264 | INFO     | neventsw: 0
[2025-04-19 15:25:35] 2025-04-19 19:25:15,264 | INFO     | pid: 2045754
[2025-04-19 15:25:35] 2025-04-19 19:25:15,265 | INFO     | pgrp: 2045754
[2025-04-19 15:25:35] 2025-04-19 19:25:15,266 | INFO     | corecount: 9
[2025-04-19 15:25:35] 2025-04-19 19:25:15,266 | INFO     | event service: False
[2025-04-19 15:25:35] 2025-04-19 19:25:15,266 | INFO     | sizes: {0: 2426596, 1: 2426851, 2: 2426851, 12: 2426879, 15: 2427113, 23: 2427141, 5929: 2453820, 5930: 2462761, 5931: 2462817, 5943: 2463015}
[2025-04-19 15:25:35] 2025-04-19 19:25:15,266 | INFO     | --------------------------------------------------
[2025-04-19 15:25:35] 2025-04-19 19:25:15,266 | INFO     | 
[2025-04-19 15:25:35] 2025-04-19 19:25:15,266 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 15:25:35] 2025-04-19 19:25:15,287 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,287 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,287 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,294 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 15:25:35] 2025-04-19 19:25:15,294 | INFO     | job 6607790578 has completed (purged errors)
[2025-04-19 15:25:35] 2025-04-19 19:25:15,294 | INFO     | overall cleanup function is called
[2025-04-19 15:25:35] 2025-04-19 19:25:15,506 | INFO     | number of running child processes to parent process 2045754: 1
[2025-04-19 15:25:35] 2025-04-19 19:25:15,507 | INFO     | maximum number of monitored processes: 6
[2025-04-19 15:25:35] 2025-04-19 19:25:15,507 | INFO     | aborting job monitoring since job object (job id=6607790578) has expired
[2025-04-19 15:25:35] 2025-04-19 19:25:16,310 | INFO     | --- collectZombieJob: --- 10, [2045754]
[2025-04-19 15:25:35] 2025-04-19 19:25:16,311 | INFO     | zombie collector waiting for pid 2045754
[2025-04-19 15:25:35] 2025-04-19 19:25:16,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 15:25:35] 2025-04-19 19:25:16,311 | INFO     | collected zombie processes
[2025-04-19 15:25:35] 2025-04-19 19:25:16,311 | INFO     | will attempt to kill all subprocesses of pid=2045754
[2025-04-19 15:25:35] 2025-04-19 19:25:16,830 | INFO     | process IDs to be killed: [2045754] (in reverse order)
[2025-04-19 15:25:35] 2025-04-19 19:25:16,993 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 15:25:35] 2025-04-19 19:25:16,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 15:25:35] 2025-04-19 19:25:17,022 | INFO     | did not find any defunct processes belonging to 2045754
[2025-04-19 15:25:35] 2025-04-19 19:25:17,041 | INFO     | did not find any defunct processes belonging to 2045754
[2025-04-19 15:25:35] 2025-04-19 19:25:17,045 | INFO     | ready for new job
[2025-04-19 15:25:35] 2025-04-19 19:25:17,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 15:25:35] 2025-04-19 19:25:17,048 | INFO     | **************************************
[2025-04-19 15:25:35] 2025-04-19 19:25:17,048 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 15:25:35] 2025-04-19 19:25:17,048 | INFO     | **************************************
[2025-04-19 15:25:35] 2025-04-19 19:25:17,048 | INFO     | 
[2025-04-19 15:25:35] 2025-04-19 19:25:17,068 | INFO     | architecture information:
[2025-04-19 15:25:35] 2025-04-19 19:25:17,072 | INFO     | executing command: cat /etc/os-release
[2025-04-19 15:25:35] 2025-04-19 19:25:17,135 | INFO     | cat /etc/os-release:
[2025-04-19 15:25:35] NAME="CentOS Linux"
[2025-04-19 15:25:35] VERSION="7 (Core)"
[2025-04-19 15:25:35] ID="centos"
[2025-04-19 15:25:35] ID_LIKE="rhel fedora"
[2025-04-19 15:25:35] VERSION_ID="7"
[2025-04-19 15:25:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 15:25:35] ANSI_COLOR="0;31"
[2025-04-19 15:25:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 15:25:35] HOME_URL="https://www.centos.org/"
[2025-04-19 15:25:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 15:25:35] 
[2025-04-19 15:25:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 15:25:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 15:25:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 15:25:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 15:25:35] 
[2025-04-19 15:25:35] 2025-04-19 19:25:17,136 | INFO     | **************************************
[2025-04-19 15:25:35] 2025-04-19 19:25:17,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 15:25:35] 2025-04-19 19:25:17,807 | INFO     | sufficient remaining disk space (75240570880 B)
[2025-04-19 15:25:35] 2025-04-19 19:25:17,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 15:25:35] 2025-04-19 19:25:17,807 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 15:25:35] 2025-04-19 19:25:17,807 | INFO     | update_server=False
[2025-04-19 15:25:35] 2025-04-19 19:25:17,807 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 15:25:35] 2025-04-19 19:25:18,012 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 15:25:35] 2025-04-19 19:25:18,013 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 15:25:35] 2025-04-19 19:25:18,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 15:25:35] 2025-04-19 19:25:18,013 | INFO     | will abort loop
[2025-04-19 15:25:35] 2025-04-19 19:25:18,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 15:25:35] 2025-04-19 19:25:18,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 15:25:35] 2025-04-19 19:25:18,306 | INFO     | all job control threads have been joined
[2025-04-19 15:25:35] 2025-04-19 19:25:18,309 | INFO     | all data control threads have been joined
[2025-04-19 15:25:35] 2025-04-19 19:25:18,739 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 15:25:35] 2025-04-19 19:25:18,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 15:25:35] 2025-04-19 19:25:18,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 15:25:35] 2025-04-19 19:25:18,813 | INFO     | [job] retrieve thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:18,867 | INFO     | [data] copytool_in thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:19,018 | INFO     | [job] job monitor thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:19,149 | INFO     | all payload control threads have been joined
[2025-04-19 15:25:35] 2025-04-19 19:25:19,311 | INFO     | [job] control thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:19,315 | INFO     | [data] control thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:19,715 | INFO     | [payload] validate_post thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:19,869 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:20,057 | INFO     | [job] validate thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:20,059 | INFO     | [data] copytool_out thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:20,154 | INFO     | [payload] control thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:20,211 | INFO     | [payload] failed_post thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:20,223 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:20,229 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:20,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 15:25:35] 2025-04-19 19:25:21,277 | INFO     | [job] queue monitor thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:22,117 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:28,010 | INFO     | job.realtimelogging is not enabled
[2025-04-19 15:25:35] 2025-04-19 19:25:29,016 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 15:25:35] 2025-04-19 19:25:29,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148990662464)>', '<ExcThread(monitor, started 140148272527104)>']
[2025-04-19 15:25:35] 2025-04-19 19:25:29,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 15:25:35] 2025-04-19 19:25:29,811 | INFO     | [monitor] control thread has ended
[2025-04-19 15:25:35] 2025-04-19 19:25:34,739 | INFO     | all workflow threads have been joined
[2025-04-19 15:25:35] 2025-04-19 19:25:34,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 15:25:35] 2025-04-19 19:25:34,740 | INFO     | traces error code: 0
[2025-04-19 15:25:35] 2025-04-19 19:25:34,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 15:25:35] 2025-04-19 19:25:35,067 [wrapper] ==== pilot stdout END ====
[2025-04-19 15:25:35] 2025-04-19 19:25:35,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 15:25:35] 2025-04-19 19:25:35,072 [wrapper] pilotpid: 2035932
[2025-04-19 15:25:35] 2025-04-19 19:25:35,074 [wrapper] Pilot exit status: 0
[2025-04-19 15:25:35] 2025-04-19 19:25:35,088 [wrapper] pandaids: 6607790578
[2025-04-19 15:25:35] 2025-04-19 19:25:35,154 [wrapper] cleanup supervisor_pilot 2509524 2035935
[2025-04-19 15:25:35] 2025-04-19 19:25:35,157 [wrapper] Test setup, not cleaning
[2025-04-19 15:25:35] 2025-04-19 19:25:35,160 [wrapper] apfmon messages muted
[2025-04-19 15:25:35] 2025-04-19 19:25:35,162 [wrapper] ==== wrapper stdout END ====
[2025-04-19 15:25:35] 2025-04-19 19:25:35,165 [wrapper] ==== wrapper stderr END ====
[2025-04-19 15:25:35]  *** Error codes and diagnostics ***
[2025-04-19 15:25:35]     "exeErrorCode": 0,
[2025-04-19 15:25:35]     "exeErrorDiag": "",
[2025-04-19 15:25:35]     "pilotErrorCode": 0,
[2025-04-19 15:25:35]     "pilotErrorDiag": "",
[2025-04-19 15:25:35]  *** Listing of results directory ***
[2025-04-19 15:25:35] total 413296
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 09:47 queuedata.json
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 09:48 pilot3.tar.gz
[2025-04-19 15:25:35] -rwx------. 1 boincer umatlas     37140 Apr 19 09:48 runpilot2-wrapper.sh
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas       100 Apr 19 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 15:25:35] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 13:44 run_atlas
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas       105 Apr 19 13:44 job.xml
[2025-04-19 15:25:35] -rw-r--r--. 2 boincer umatlas 221457225 Apr 19 13:44 EVNT.44075481._003245.pool.root.1
[2025-04-19 15:25:35] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 13:44 start_atlas.sh
[2025-04-19 15:25:35] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 13:44 shared
[2025-04-19 15:25:35] -rw-r--r--. 2 boincer umatlas    508889 Apr 19 13:44 input.tar.gz
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas         0 Apr 19 13:44 boinc_lockfile
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 13:44 pandaJob.out
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas       467 Apr 19 13:44 setup.sh.local
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas    991244 Apr 19 13:45 agis_schedconf.cvmfs.json
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas   1618536 Apr 19 13:45 agis_ddmendpoints.agis.ALL.json
[2025-04-19 15:25:35] drwx------. 4 boincer umatlas      4096 Apr 19 13:45 pilot3
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas      6840 Apr 19 15:22 init_data.xml
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas 196090414 Apr 19 15:24 HITS.44075483._083677.pool.root.1
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas       530 Apr 19 15:24 boinc_task_state.xml
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas      1040 Apr 19 15:24 memory_monitor_summary.json
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas    332049 Apr 19 15:25 log.44075483._083677.job.log.tgz.1
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas      7723 Apr 19 15:25 heartbeat.json
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas        95 Apr 19 15:25 pilot_heartbeat.json
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 15:25 boinc_mmap_file
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas        27 Apr 19 15:25 wrapper_checkpoint.txt
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas      4611 Apr 19 15:25 pilotlog.txt
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas    566827 Apr 19 15:25 log.44075483._083677.job.log.1
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas       357 Apr 19 15:25 output.list
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas       620 Apr 19 15:25 runtime_log
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas    921600 Apr 19 15:25 result.tar.gz
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas     11418 Apr 19 15:25 runtime_log.err
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas       653 Apr 19 15:25 MFIKDm1jNQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmT4hLDm548fxm.diag
[2025-04-19 15:25:35] -rw-r--r--. 1 boincer umatlas     22531 Apr 19 15:25 stderr.txt
[2025-04-19 15:25:35] HITS file was successfully produced:
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas 196090414 Apr 19 15:24 shared/HITS.pool.root.1
[2025-04-19 15:25:35]  *** Contents of shared directory: ***
[2025-04-19 15:25:35] total 409188
[2025-04-19 15:25:35] -rw-r--r--. 2 boincer umatlas 221457225 Apr 19 13:44 ATLAS.root_0
[2025-04-19 15:25:35] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 13:44 start_atlas.sh
[2025-04-19 15:25:35] -rw-r--r--. 2 boincer umatlas    508889 Apr 19 13:44 input.tar.gz
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas 196090414 Apr 19 15:24 HITS.pool.root.1
[2025-04-19 15:25:35] -rw-------. 1 boincer umatlas    921600 Apr 19 15:25 result.tar.gz
15:25:36 (2028202): run_atlas exited; CPU time 36060.357294
15:25:36 (2028202): called boinc_finish(0)

</stderr_txt>
]]>

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