Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:16 (17673): wrapper (7.7.26015): starting
11:38:16 (17673): wrapper: running run_atlas (--nthreads 10)
[2025-04-19 11:38:16] Arguments: --nthreads 10
[2025-04-19 11:38:16] Threads: 10
[2025-04-19 11:38:16] Checking for CVMFS
[2025-04-19 11:38:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 11:38:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 11:38:17] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 11:38:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 11:38:18] 2.11.2.0 23440 215057 343676 145043 3 205 17457337 18432001 8280 130560 0 41020370 99.335 63448359 39624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 11:38:18] CVMFS is ok
[2025-04-19 11:38:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 11:38:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 11:38:18] Further information can be found at the LHC@home message board.
[2025-04-19 11:38:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 11:38:18] Checking for apptainer binary...
[2025-04-19 11:38:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 11:38:18] Running /usr/bin/apptainer --version
[2025-04-19 11:38:19] apptainer version 1.3.2-1.el7
[2025-04-19 11:38:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 11:38:33] c-211-31.aglt2.org
[2025-04-19 11:38:33] apptainer works
[2025-04-19 11:38:33] Set ATHENA_PROC_NUMBER=10
[2025-04-19 11:38:33] Set ATHENA_CORE_NUMBER=10
[2025-04-19 11:38:33] Starting ATLAS job with PandaID=6607789372
[2025-04-19 11:38:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:27:23 (37506): wrapper (7.7.26015): starting
14:27:23 (37506): wrapper: running run_atlas (--nthreads 10)
[2025-04-19 14:27:23] Arguments: --nthreads 10
[2025-04-19 14:27:23] Threads: 10
[2025-04-19 14:27:23] This job has been restarted, cleaning up previous attempt
[2025-04-19 14:27:23] Checking for CVMFS
[2025-04-19 14:27:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 14:27:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 14:27:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 14:27:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 14:27:25] 2.11.2.0 23440 215226 346984 145048 2 319 17979775 18432001 8067 130560 0 41200409 99.336 63579213 39609 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 14:27:25] CVMFS is ok
[2025-04-19 14:27:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 14:27:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 14:27:25] Further information can be found at the LHC@home message board.
[2025-04-19 14:27:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 14:27:25] Checking for apptainer binary...
[2025-04-19 14:27:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 14:27:25] Running /usr/bin/apptainer --version
[2025-04-19 14:27:26] apptainer version 1.3.2-1.el7
[2025-04-19 14:27:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 14:27:29] c-211-31.aglt2.org
[2025-04-19 14:27:29] apptainer works
[2025-04-19 14:27:29] Set ATHENA_PROC_NUMBER=10
[2025-04-19 14:27:29] Set ATHENA_CORE_NUMBER=10
[2025-04-19 14:27:29] Starting ATLAS job with PandaID=6607789372
[2025-04-19 14:27:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 23:32:59]  *** The last 200 lines of the pilot log: ***
[2025-04-19 23:32:59] 2025-04-20 03:32:40,560 | INFO     | sum of deviations: 321224323605.46875
[2025-04-19 23:32:59] 2025-04-20 03:32:40,560 | INFO     | mean x: 1745103807.5236294
[2025-04-19 23:32:59] 2025-04-20 03:32:40,560 | INFO     | mean y: 2535427.922495274
[2025-04-19 23:32:59] 2025-04-20 03:32:40,560 | INFO     | -- intersect: -12209243816.84233
[2025-04-19 23:32:59] 2025-04-20 03:32:40,560 | INFO     | intersect: -12209243816.84233
[2025-04-19 23:32:59] 2025-04-20 03:32:40,561 | INFO     | chi2: 3.584707374664114
[2025-04-19 23:32:59] 2025-04-20 03:32:40,561 | INFO     | current chi2=3.584707374664114 (change=48.53712013660867 %)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,562 | INFO     | sum of square deviations: 44614592988.57072
[2025-04-19 23:32:59] 2025-04-20 03:32:40,569 | INFO     | sum of deviations: 200715761500.35495
[2025-04-19 23:32:59] 2025-04-20 03:32:40,569 | INFO     | mean x: 1745103960.028626
[2025-04-19 23:32:59] 2025-04-20 03:32:40,569 | INFO     | mean y: 2549677.5763358776
[2025-04-19 23:32:59] 2025-04-20 03:32:40,570 | INFO     | -- intersect: -7848466027.624923
[2025-04-19 23:32:59] 2025-04-20 03:32:40,570 | INFO     | intersect: -7848466027.624923
[2025-04-19 23:32:59] 2025-04-20 03:32:40,570 | INFO     | chi2: 1.82317646438859
[2025-04-19 23:32:59] 2025-04-20 03:32:40,571 | INFO     | current chi2=1.82317646438859 (change=49.14015918637094 %)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,571 | INFO     | sum of square deviations: 43349535947.15984
[2025-04-19 23:32:59] 2025-04-20 03:32:40,579 | INFO     | sum of deviations: 86578556681.1772
[2025-04-19 23:32:59] 2025-04-20 03:32:40,579 | INFO     | mean x: 1745104112.5337186
[2025-04-19 23:32:59] 2025-04-20 03:32:40,579 | INFO     | mean y: 2563437.4470134876
[2025-04-19 23:32:59] 2025-04-20 03:32:40,579 | INFO     | -- intersect: -3482793257.160347
[2025-04-19 23:32:59] 2025-04-20 03:32:40,579 | INFO     | intersect: -3482793257.160347
[2025-04-19 23:32:59] 2025-04-20 03:32:40,580 | INFO     | chi2: 0.25746702572676994
[2025-04-19 23:32:59] 2025-04-20 03:32:40,580 | INFO     | current chi2=0.25746702572676994 (change=85.8781072070765 %)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,581 | INFO     | sum of square deviations: 42108618893.22177
[2025-04-19 23:32:59] 2025-04-20 03:32:40,588 | INFO     | sum of deviations: 44356664690.28404
[2025-04-19 23:32:59] 2025-04-20 03:32:40,588 | INFO     | mean x: 1745104265.0389104
[2025-04-19 23:32:59] 2025-04-20 03:32:40,588 | INFO     | mean y: 2568618.4357976653
[2025-04-19 23:32:59] 2025-04-20 03:32:40,588 | INFO     | -- intersect: -1835701236.251261
[2025-04-19 23:32:59] 2025-04-20 03:32:40,588 | INFO     | intersect: -1835701236.251261
[2025-04-19 23:32:59] 2025-04-20 03:32:40,589 | INFO     | chi2: 0.034900401947268934
[2025-04-19 23:32:59] 2025-04-20 03:32:40,589 | INFO     | current chi2=0.034900401947268934 (change=86.44471001723302 %)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,590 | INFO     | sum of square deviations: 40891671972.42441
[2025-04-19 23:32:59] 2025-04-20 03:32:40,597 | INFO     | sum of deviations: 37495443441.39291
[2025-04-19 23:32:59] 2025-04-20 03:32:40,597 | INFO     | mean x: 1745104417.540275
[2025-04-19 23:32:59] 2025-04-20 03:32:40,597 | INFO     | mean y: 2569471.9076620825
[2025-04-19 23:32:59] 2025-04-20 03:32:40,597 | INFO     | -- intersect: -1597596547.9932072
[2025-04-19 23:32:59] 2025-04-20 03:32:40,597 | INFO     | intersect: -1597596547.9932072
[2025-04-19 23:32:59] 2025-04-20 03:32:40,598 | INFO     | chi2: 0.017020060421146743
[2025-04-19 23:32:59] 2025-04-20 03:32:40,598 | INFO     | current chi2=0.017020060421146743 (change=51.23248022512069 %)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,599 | INFO     | sum of square deviations: 39698337815.95041
[2025-04-19 23:32:59] 2025-04-20 03:32:40,606 | INFO     | sum of deviations: 39813573262.9385
[2025-04-19 23:32:59] 2025-04-20 03:32:40,606 | INFO     | mean x: 1745104570.045635
[2025-04-19 23:32:59] 2025-04-20 03:32:40,606 | INFO     | mean y: 2569175.176587302
[2025-04-19 23:32:59] 2025-04-20 03:32:40,606 | INFO     | -- intersect: -1747601045.3782072
[2025-04-19 23:32:59] 2025-04-20 03:32:40,606 | INFO     | intersect: -1747601045.3782072
[2025-04-19 23:32:59] 2025-04-20 03:32:40,607 | INFO     | chi2: 0.015443753648176642
[2025-04-19 23:32:59] 2025-04-20 03:32:40,607 | INFO     | current chi2=0.015443753648176642 (change=9.261464025189962 %)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,607 | INFO     | left removable region: 60
[2025-04-19 23:32:59] 2025-04-20 03:32:40,608 | INFO     | sum of square deviations: 31784904605.869637
[2025-04-19 23:32:59] 2025-04-20 03:32:40,614 | INFO     | sum of deviations: 41143975529.64743
[2025-04-19 23:32:59] 2025-04-20 03:32:40,614 | INFO     | mean x: 1745105302.0491452
[2025-04-19 23:32:59] 2025-04-20 03:32:40,614 | INFO     | mean y: 2568668.4935897435
[2025-04-19 23:32:59] 2025-04-20 03:32:40,614 | INFO     | -- intersect: -2256383206.1302147
[2025-04-19 23:32:59] 2025-04-20 03:32:40,614 | INFO     | intersect: -2256383206.1302147
[2025-04-19 23:32:59] 2025-04-20 03:32:40,615 | INFO     | chi2: 0.0011658998850642272
[2025-04-19 23:32:59] 2025-04-20 03:32:40,615 | INFO     | -- intersect: -2256383206.1302147
[2025-04-19 23:32:59] 2025-04-20 03:32:40,616 | INFO     | current memory leak: 1.29 B/s (using 468 data points, chi2=0.00)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,617 | INFO     | ..............................
[2025-04-19 23:32:59] 2025-04-20 03:32:40,617 | INFO     | . Timing measurements:
[2025-04-19 23:32:59] 2025-04-20 03:32:40,617 | INFO     | . get job = 0 s
[2025-04-19 23:32:59] 2025-04-20 03:32:40,617 | INFO     | . initial setup = 2 s
[2025-04-19 23:32:59] 2025-04-20 03:32:40,617 | INFO     | . payload setup = 28 s
[2025-04-19 23:32:59] 2025-04-20 03:32:40,617 | INFO     | . stage-in = 0 s
[2025-04-19 23:32:59] 2025-04-20 03:32:40,617 | INFO     | . payload execution = 32584 s
[2025-04-19 23:32:59] 2025-04-20 03:32:40,617 | INFO     | . stage-out = 2 s
[2025-04-19 23:32:59] 2025-04-20 03:32:40,618 | INFO     | . log creation = 0 s
[2025-04-19 23:32:59] 2025-04-20 03:32:40,618 | INFO     | ..............................
[2025-04-19 23:32:59] 2025-04-20 03:32:40,747 | INFO     | 
[2025-04-19 23:32:59] 2025-04-20 03:32:40,747 | INFO     | job summary report
[2025-04-19 23:32:59] 2025-04-20 03:32:40,748 | INFO     | --------------------------------------------------
[2025-04-19 23:32:59] 2025-04-20 03:32:40,748 | INFO     | PanDA job id: 6607789372
[2025-04-19 23:32:59] 2025-04-20 03:32:40,748 | INFO     | task id: 44075483
[2025-04-19 23:32:59] 2025-04-20 03:32:40,748 | INFO     | errors: (none)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,748 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 23:32:59] 2025-04-20 03:32:40,748 | INFO     | pilot state: finished 
[2025-04-19 23:32:59] 2025-04-20 03:32:40,749 | INFO     | transexitcode: 0
[2025-04-19 23:32:59] 2025-04-20 03:32:40,749 | INFO     | exeerrorcode: 0
[2025-04-19 23:32:59] 2025-04-20 03:32:40,749 | INFO     | exeerrordiag: 
[2025-04-19 23:32:59] 2025-04-20 03:32:40,749 | INFO     | exitcode: 0
[2025-04-19 23:32:59] 2025-04-20 03:32:40,749 | INFO     | exitmsg: OK
[2025-04-19 23:32:59] 2025-04-20 03:32:40,749 | INFO     | cpuconsumptiontime: 79493 s
[2025-04-19 23:32:59] 2025-04-20 03:32:40,750 | INFO     | nevents: 400
[2025-04-19 23:32:59] 2025-04-20 03:32:40,750 | INFO     | neventsw: 0
[2025-04-19 23:32:59] 2025-04-20 03:32:40,750 | INFO     | pid: 11372
[2025-04-19 23:32:59] 2025-04-20 03:32:40,750 | INFO     | pgrp: 11372
[2025-04-19 23:32:59] 2025-04-20 03:32:40,750 | INFO     | corecount: 10
[2025-04-19 23:32:59] 2025-04-20 03:32:40,750 | INFO     | event service: False
[2025-04-19 23:32:59] 2025-04-20 03:32:40,751 | INFO     | sizes: {0: 2426602, 1: 2426801, 2: 2426829, 13: 2426829, 20: 2427091, 23: 2427119, 32617: 2465296, 32620: 2474237, 32623: 2474293, 32627: 2474463}
[2025-04-19 23:32:59] 2025-04-20 03:32:40,751 | INFO     | --------------------------------------------------
[2025-04-19 23:32:59] 2025-04-20 03:32:40,751 | INFO     | 
[2025-04-19 23:32:59] 2025-04-20 03:32:40,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 23:32:59] 2025-04-20 03:32:40,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,767 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,770 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,770 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 23:32:59] 2025-04-20 03:32:40,771 | INFO     | job 6607789372 has completed (purged errors)
[2025-04-19 23:32:59] 2025-04-20 03:32:40,771 | INFO     | overall cleanup function is called
[2025-04-19 23:32:59] 2025-04-20 03:32:41,781 | INFO     | --- collectZombieJob: --- 10, [11372]
[2025-04-19 23:32:59] 2025-04-20 03:32:41,781 | INFO     | zombie collector waiting for pid 11372
[2025-04-19 23:32:59] 2025-04-20 03:32:41,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 23:32:59] 2025-04-20 03:32:41,781 | INFO     | collected zombie processes
[2025-04-19 23:32:59] 2025-04-20 03:32:41,781 | INFO     | will attempt to kill all subprocesses of pid=11372
[2025-04-19 23:32:59] 2025-04-20 03:32:41,956 | INFO     | process IDs to be killed: [11372] (in reverse order)
[2025-04-19 23:32:59] 2025-04-20 03:32:42,040 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 23:32:59] 2025-04-20 03:32:42,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 23:32:59] 2025-04-20 03:32:42,046 | INFO     | did not find any defunct processes belonging to 11372
[2025-04-19 23:32:59] 2025-04-20 03:32:42,053 | INFO     | did not find any defunct processes belonging to 11372
[2025-04-19 23:32:59] 2025-04-20 03:32:42,053 | INFO     | ready for new job
[2025-04-19 23:32:59] 2025-04-20 03:32:42,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 23:32:59] 2025-04-20 03:32:42,056 | INFO     | **************************************
[2025-04-19 23:32:59] 2025-04-20 03:32:42,056 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 23:32:59] 2025-04-20 03:32:42,056 | INFO     | **************************************
[2025-04-19 23:32:59] 2025-04-20 03:32:42,056 | INFO     | 
[2025-04-19 23:32:59] 2025-04-20 03:32:42,059 | INFO     | architecture information:
[2025-04-19 23:32:59] 2025-04-20 03:32:42,059 | INFO     | executing command: cat /etc/os-release
[2025-04-19 23:32:59] 2025-04-20 03:32:42,074 | INFO     | cat /etc/os-release:
[2025-04-19 23:32:59] NAME="CentOS Linux"
[2025-04-19 23:32:59] VERSION="7 (Core)"
[2025-04-19 23:32:59] ID="centos"
[2025-04-19 23:32:59] ID_LIKE="rhel fedora"
[2025-04-19 23:32:59] VERSION_ID="7"
[2025-04-19 23:32:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 23:32:59] ANSI_COLOR="0;31"
[2025-04-19 23:32:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 23:32:59] HOME_URL="https://www.centos.org/"
[2025-04-19 23:32:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 23:32:59] 
[2025-04-19 23:32:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 23:32:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 23:32:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 23:32:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 23:32:59] 
[2025-04-19 23:32:59] 2025-04-20 03:32:42,074 | INFO     | **************************************
[2025-04-19 23:32:59] 2025-04-20 03:32:42,575 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 23:32:59] 2025-04-20 03:32:42,588 | INFO     | sufficient remaining disk space (56941871104 B)
[2025-04-19 23:32:59] 2025-04-20 03:32:42,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 23:32:59] 2025-04-20 03:32:42,589 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 23:32:59] 2025-04-20 03:32:42,589 | INFO     | update_server=False
[2025-04-19 23:32:59] 2025-04-20 03:32:42,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 23:32:59] 2025-04-20 03:32:42,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:32:59] 2025-04-20 03:32:42,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 23:32:59] 2025-04-20 03:32:42,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:32:59] 2025-04-20 03:32:42,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 23:32:59] 2025-04-20 03:32:42,590 | INFO     | aborting loop
[2025-04-19 23:32:59] 2025-04-20 03:32:42,704 | INFO     | all payload control threads have been joined
[2025-04-19 23:32:59] 2025-04-20 03:32:43,176 | INFO     | all data control threads have been joined
[2025-04-19 23:32:59] 2025-04-20 03:32:43,277 | INFO     | all job control threads have been joined
[2025-04-19 23:32:59] 2025-04-20 03:32:43,518 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 23:32:59] 2025-04-20 03:32:43,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 23:32:59] 2025-04-20 03:32:43,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 23:32:59] 2025-04-20 03:32:43,595 | INFO     | [job] queue monitor thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:43,595 | INFO     | [job] retrieve thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:43,595 | INFO     | [job] job monitor thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:43,709 | INFO     | [payload] control thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:43,800 | INFO     | [payload] failed_post thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:43,884 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:44,031 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:44,182 | INFO     | [data] control thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:44,282 | INFO     | [job] control thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:44,302 | INFO     | [data] copytool_in thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:44,591 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:44,595 | INFO     | [data] copytool_out thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:44,775 | INFO     | [payload] validate_post thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:45,090 | INFO     | [job] validate thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:46,596 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:52,854 | INFO     | job.realtimelogging is not enabled
[2025-04-19 23:32:59] 2025-04-20 03:32:53,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 23:32:59] 2025-04-20 03:32:54,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873730942784)>', '<ExcThread(monitor, started 139873285547776)>']
[2025-04-19 23:32:59] 2025-04-20 03:32:54,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 23:32:59] 2025-04-20 03:32:54,576 | INFO     | [monitor] control thread has ended
[2025-04-19 23:32:59] 2025-04-20 03:32:59,412 | INFO     | all workflow threads have been joined
[2025-04-19 23:32:59] 2025-04-20 03:32:59,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 23:32:59] 2025-04-20 03:32:59,412 | INFO     | traces error code: 0
[2025-04-19 23:32:59] 2025-04-20 03:32:59,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 23:32:59] 2025-04-20 03:32:59,511 [wrapper] ==== pilot stdout END ====
[2025-04-19 23:32:59] 2025-04-20 03:32:59,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 23:32:59] 2025-04-20 03:32:59,516 [wrapper] pilotpid: 46830
[2025-04-19 23:32:59] 2025-04-20 03:32:59,518 [wrapper] Pilot exit status: 0
[2025-04-19 23:32:59] 2025-04-20 03:32:59,528 [wrapper] pandaids: 6607789372 6607789372
[2025-04-19 23:32:59] 2025-04-20 03:32:59,562 [wrapper] cleanup supervisor_pilot 33656 46832
[2025-04-19 23:32:59] 2025-04-20 03:32:59,564 [wrapper] Test setup, not cleaning
[2025-04-19 23:32:59] 2025-04-20 03:32:59,571 [wrapper] apfmon messages muted
[2025-04-19 23:32:59] 2025-04-20 03:32:59,572 [wrapper] ==== wrapper stdout END ====
[2025-04-19 23:32:59] 2025-04-20 03:32:59,576 [wrapper] ==== wrapper stderr END ====
[2025-04-19 23:32:59]  *** Error codes and diagnostics ***
[2025-04-19 23:32:59]     "exeErrorCode": 0,
[2025-04-19 23:32:59]     "exeErrorDiag": "",
[2025-04-19 23:32:59]     "pilotErrorCode": 0,
[2025-04-19 23:32:59]     "pilotErrorDiag": "",
[2025-04-19 23:32:59]  *** Listing of results directory ***
[2025-04-19 23:32:59] total 639536
[2025-04-19 23:32:59] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 08:37 pilot3.tar.gz
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 08:45 queuedata.json
[2025-04-19 23:32:59] -rwx------ 1 boincer umatlas     37140 Apr 19 08:45 runpilot2-wrapper.sh
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas       100 Apr 19 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 23:32:59] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 11:38 run_atlas
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas       105 Apr 19 11:38 job.xml
[2025-04-19 23:32:59] -rw-r--r-- 3 boincer umatlas 226201182 Apr 19 11:38 EVNT.44075481._003214.pool.root.1
[2025-04-19 23:32:59] -rw-r--r-- 3 boincer umatlas 226201182 Apr 19 11:38 ATLAS.root_0
[2025-04-19 23:32:59] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 11:38 start_atlas.sh
[2025-04-19 23:32:59] drwxrwx--x 2 boincer umatlas      4096 Apr 19 11:38 shared
[2025-04-19 23:32:59] -rw-r--r-- 2 boincer umatlas    508890 Apr 19 11:38 input.tar.gz
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas         0 Apr 19 11:38 boinc_lockfile
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 14:27 pandaJob.out
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas       467 Apr 19 14:27 setup.sh.local
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas    991268 Apr 19 14:28 agis_schedconf.cvmfs.json
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas      6036 Apr 19 23:30 init_data.xml
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas        96 Apr 19 23:31 pilot_heartbeat.json
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas 192161548 Apr 19 23:31 HITS.44075483._082914.pool.root.1
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas       531 Apr 19 23:31 boinc_task_state.xml
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas      1055 Apr 19 23:32 memory_monitor_summary.json
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas   1618536 Apr 19 23:32 agis_ddmendpoints.agis.ALL.json
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas    597377 Apr 19 23:32 log.44075483._082914.job.log.tgz.1
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas      7745 Apr 19 23:32 heartbeat.json
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas        28 Apr 19 23:32 wrapper_checkpoint.txt
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas      4425 Apr 19 23:32 pilotlog.txt
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 23:32 boinc_mmap_file
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas   2632963 Apr 19 23:32 log.44075483._082914.job.log.1
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas       357 Apr 19 23:32 output.list
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas       620 Apr 19 23:32 runtime_log
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas   3246080 Apr 19 23:32 result.tar.gz
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas     11506 Apr 19 23:32 runtime_log.err
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas       787 Apr 19 23:32 gZ1MDmClMQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdY6KDmgJ42un.diag
[2025-04-19 23:32:59] -rw-r--r-- 1 boincer umatlas     23009 Apr 19 23:32 stderr.txt
[2025-04-19 23:32:59] HITS file was successfully produced:
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas 192161548 Apr 19 23:31 shared/HITS.pool.root.1
[2025-04-19 23:32:59]  *** Contents of shared directory: ***
[2025-04-19 23:32:59] total 412256
[2025-04-19 23:32:59] -rw-r--r-- 3 boincer umatlas 226201182 Apr 19 11:38 ATLAS.root_0
[2025-04-19 23:32:59] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 11:38 start_atlas.sh
[2025-04-19 23:32:59] -rw-r--r-- 2 boincer umatlas    508890 Apr 19 11:38 input.tar.gz
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas 192161548 Apr 19 23:31 HITS.pool.root.1
[2025-04-19 23:32:59] -rw------- 1 boincer umatlas   3246080 Apr 19 23:32 result.tar.gz
23:33:00 (37506): run_atlas exited; CPU time 80219.037292
23:33:00 (37506): called boinc_finish(0)

</stderr_txt>
]]>

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