Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 17:37:29 (19524): Detected: vboxwrapper 26206
2025-04-19 17:37:29 (19524): Detected: BOINC client v8.0.2
2025-04-19 17:37:30 (19524): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-19 17:37:30 (19524): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 17:37:31 (19524): Create VM. (boinc_0b086a83db341a9e, slot#1)
2025-04-19 17:37:31 (19524): Setting Memory Size for VM. (4400MB)
2025-04-19 17:37:32 (19524): Setting CPU Count for VM. (4)
2025-04-19 17:37:32 (19524): Setting Chipset Options for VM.
2025-04-19 17:37:32 (19524): Setting Graphics Controller Options for VM.
2025-04-19 17:37:33 (19524): Setting Boot Options for VM.
2025-04-19 17:37:33 (19524): Setting Network Configuration for NAT.
2025-04-19 17:37:33 (19524): Enabling VM Network Access.
2025-04-19 17:37:33 (19524): Disabling USB Support for VM.
2025-04-19 17:37:34 (19524): Disabling COM Port Support for VM.
2025-04-19 17:37:34 (19524): Disabling LPT Port Support for VM.
2025-04-19 17:37:34 (19524): Disabling Audio Support for VM.
2025-04-19 17:37:34 (19524): Disabling Clipboard Support for VM.
2025-04-19 17:37:35 (19524): Disabling Drag and Drop Support for VM.
2025-04-19 17:37:35 (19524): Adding storage controller(s) to VM.
2025-04-19 17:37:35 (19524): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 17:37:38 (19524): Adding VirtualBox Guest Additions to VM.
2025-04-19 17:37:38 (19524): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 17:37:38 (19524): forwarding host port 57447 to guest port 80
2025-04-19 17:37:39 (19524): Enabling remote desktop for VM.
2025-04-19 17:37:39 (19524): Enabling shared directory for VM.
2025-04-19 17:37:40 (19524): Starting VM using VBoxManage interface. (boinc_0b086a83db341a9e, slot#1)
2025-04-19 17:37:45 (19524): Successfully started VM. (PID = '2016')
2025-04-19 17:37:45 (19524): Reporting VM Process ID to BOINC.
2025-04-19 17:37:45 (19524): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-19 17:37:45 (19524): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 17:37:45 (19524): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 17:37:45 (19524): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 17:37:45 (19524): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 17:37:45 (19524): Detected: Web Application Enabled (http://localhost:57447)
2025-04-19 17:37:45 (19524): Detected: Remote Desktop Enabled (localhost:57448)
2025-04-19 17:37:45 (19524): Preference change detected
2025-04-19 17:37:45 (19524): Setting CPU throttle for VM. (50%)
2025-04-19 17:37:45 (19524): Setting network throttle for VM. (512KB)
2025-04-19 17:37:46 (19524): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 17:37:47 (19524): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 17:37:47 (19524): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 17:37:51 (19524): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 17:37:51 (19524): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 17:37:51 (19524): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 17:37:55 (19524): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 17:37:55 (19524): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 17:38:00 (19524): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 17:38:00 (19524): Guest Log: 00:00:00.000077 main     Log opened 2025-04-19T17:37:58.963400000Z
2025-04-19 17:38:00 (19524): Guest Log: 00:00:00.000178 main     OS Product: Linux
2025-04-19 17:38:00 (19524): Guest Log: 00:00:00.000203 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 17:38:00 (19524): Guest Log: 00:00:00.000220 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 17:38:00 (19524): Guest Log: 00:00:00.000236 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 17:38:00 (19524): Guest Log: 00:00:00.000237 main     Process ID: 1300
2025-04-19 17:38:00 (19524): Guest Log: 00:00:00.000237 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 17:38:00 (19524): Guest Log: 00:00:00.000705 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 17:38:00 (19524): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 17:38:00 (19524): Guest Log: [INFO] Mounting shared directory
2025-04-19 17:38:00 (19524): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 17:38:07 (19524): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 17:38:07 (19524): Guest Log: [INFO] Detected branch: prod
2025-04-19 17:38:07 (19524): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 17:38:07 (19524): Guest Log: Copying input files
2025-04-19 17:38:08 (19524): Guest Log: Copied input files into RunAtlas.
2025-04-19 17:38:08 (19524): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 17:38:08 (19524): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 17:38:08 (19524): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 17:38:08 (19524): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 17:38:10 (19524): Guest Log: 00:00:10.006078 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 751 089 000ns (GuestNow=1 745 077 090 213 634 000 ns GuestLast=1 745 084 278 964 723 000 ns fSetTimeLastLoop=true )
2025-04-19 17:39:05 (19524): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 17:39:05 (19524): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 17:39:05 (19524): Guest Log: 2.6.3.0 1597 1 32192 145043 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 17:39:08 (19524): Guest Log: copied the webapp to /var/www
2025-04-19 17:39:08 (19524): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-19 17:39:08 (19524): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-19 17:39:09 (19524): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 17:39:09 (19524): Guest Log:  *** Starting ATLAS job. (PandaID=6607788871 taskID=44075483) ***
2025-04-19 19:17:51 (19524): Status Report: Elapsed Time: '6000.000000'
2025-04-19 19:17:51 (19524): Status Report: CPU Time: '11797.640625'
2025-04-19 20:57:54 (19524): Status Report: Elapsed Time: '12000.000000'
2025-04-19 20:57:54 (19524): Status Report: CPU Time: '26268.484375'
2025-04-19 21:47:45 (19524): Guest Log:  *** Job finished ***
2025-04-19 21:47:45 (19524): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:33,032 | INFO     | [data] queue_monitor thread has finished
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:37,200 | INFO     | job.realtimelogging is not enabled
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:38,202 | INFO     | [payload] run_realtimelog thread has finished
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:39,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075149485888)>', '<ExcThread(monitor, started 140074041730816)>']
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:39,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:39,919 | INFO     | [monitor] control thread has ended
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,469 | INFO     | all workflow threads have been joined
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,469 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,469 | INFO     | traces error code: 0
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,710 [wrapper] ==== pilot stdout END ====
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,713 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,716 [wrapper] pilotpid: 5948
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,718 [wrapper] Pilot exit status: 0
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,806 [wrapper] pandaids: 6607788871
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,822 [wrapper] cleanup supervisor_pilot 12786 5949
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,825 [wrapper] Test setup, not cleaning
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,828 [wrapper] apfmon messages muted
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,830 [wrapper] ==== wrapper stdout END ====
2025-04-19 21:47:45 (19524): Guest Log: 2025-04-19 19:47:44,833 [wrapper] ==== wrapper stderr END ====
2025-04-19 21:47:45 (19524): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 21:47:45 (19524): Guest Log:     "exeErrorCode": 0,
2025-04-19 21:47:45 (19524): Guest Log:     "exeErrorDiag": "",
2025-04-19 21:47:45 (19524): Guest Log:     "pilotErrorCode": 0,
2025-04-19 21:47:45 (19524): Guest Log:     "pilotErrorDiag": "",
2025-04-19 21:47:45 (19524): Guest Log:  *** Listing of results directory ***
2025-04-19 21:47:45 (19524): Guest Log: total 192700
2025-04-19 21:47:45 (19524): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 19 12:22 pilot3.tar.gz
2025-04-19 21:47:45 (19524): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 19 12:33 runpilot2-wrapper.sh
2025-04-19 21:47:45 (19524): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 19 12:33 queuedata.json
2025-04-19 21:47:45 (19524): Guest Log: -rwxr-xr-x. 1 atlas atlas     10637 Apr 19 15:38 init_data.xml
2025-04-19 21:47:45 (19524): Guest Log: -rwxr-xr-x. 1 atlas atlas    508893 Apr 19 15:38 input.tar.gz
2025-04-19 21:47:45 (19524): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 15:38 start_atlas.sh
2025-04-19 21:47:45 (19524): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 15:38 EVNT.44075481._003211.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 21:47:45 (19524): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 19 15:39 pandaJob.out
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 15:39 setup.sh.local
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas    991300 Apr 19 15:41 agis_schedconf.cvmfs.json
2025-04-19 21:47:45 (19524): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 15:41 pilot3
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas 190701584 Apr 19 19:46 HITS.44075483._082820.pool.root.1
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 19:46 pilot_heartbeat.json
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas      1027 Apr 19 19:47 memory_monitor_summary.json
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 19:47 agis_ddmendpoints.agis.ALL.json
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas    310607 Apr 19 19:47 log.44075483._082820.job.log.tgz.1
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas      7708 Apr 19 19:47 heartbeat.json
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 19 19:47 pilotlog.txt
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas   1101315 Apr 19 19:47 log.44075483._082820.job.log.1
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 19:47 output.list
2025-04-19 21:47:45 (19524): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 19:47 runtime_log
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas   1433600 Apr 19 19:47 result.tar.gz
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas       658 Apr 19 19:47 YILKDmJZMQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmwuhLDmkv3k2m.diag
2025-04-19 21:47:45 (19524): Guest Log: -rw-r--r--. 1 atlas atlas     10942 Apr 19 19:47 runtime_log.err
2025-04-19 21:47:45 (19524): Guest Log: Looking for outputfile HITS.44075483._082820.pool.root.1
2025-04-19 21:47:45 (19524): Guest Log: HITS file was successfully produced
2025-04-19 21:47:45 (19524): Guest Log: -rw-------. 1 atlas atlas 190701584 Apr 19 19:46 /home/atlas/RunAtlas/HITS.44075483._082820.pool.root.1
2025-04-19 21:47:46 (19524): Guest Log: Successfully finished the ATLAS job!
2025-04-19 21:47:46 (19524): Guest Log: Copying the results back to the shared directory!
2025-04-19 21:47:46 (19524): Guest Log:  *** Contents of shared directory: ***
2025-04-19 21:47:46 (19524): Guest Log: total 365380
2025-04-19 21:47:46 (19524): Guest Log: -rwxrwxrwx. 1 root root 224574347 Apr 19 15:37 ATLAS.root_0
2025-04-19 21:47:46 (19524): Guest Log: -rwxrwxrwx. 1 root root 190701584 Apr 19 19:47 HITS.pool.root.1
2025-04-19 21:47:46 (19524): Guest Log: -rwxrwxrwx. 1 root root     10637 Apr 19 15:37 init_data.xml
2025-04-19 21:47:46 (19524): Guest Log: -rwxrwxrwx. 1 root root    508893 Apr 19 15:31 input.tar.gz
2025-04-19 21:47:46 (19524): Guest Log: -rwxrwxrwx. 1 root root   1433600 Apr 19 19:47 result.tar.gz
2025-04-19 21:47:46 (19524): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 19 15:31 start_atlas.sh
2025-04-19 21:47:46 (19524): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 21:47:46 (19524): VM Completion File Detected.
2025-04-19 21:47:46 (19524): Powering off VM.
2025-04-19 21:47:47 (19524): Successfully stopped VM.
2025-04-19 21:47:47 (19524): Deregistering VM. (boinc_0b086a83db341a9e, slot#1)
2025-04-19 21:47:47 (19524): Removing network bandwidth throttle group from VM.
2025-04-19 21:47:48 (19524): Removing VM from VirtualBox.
21:47:53 (19524): called boinc_finish(0)

</stderr_txt>
]]>

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