Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:41:25 (1992260): wrapper (7.7.26015): starting
23:41:25 (1992260): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 23:41:25] Arguments: --nthreads 3
[2025-04-19 23:41:25] Threads: 3
[2025-04-19 23:41:25] Checking for CVMFS
[2025-04-19 23:41:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 23:41:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 23:41:25] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 23:41:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 23:41:25] 2.9.2.0 1747198 637 69040 145052 3 56 24496041 36864000 0 130560 0 630642 99.994 294626 38228 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 23:41:25] CVMFS is ok
[2025-04-19 23:41:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 23:41:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 23:41:25] Further information can be found at the LHC@home message board.
[2025-04-19 23:41:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 23:41:25] Checking for apptainer binary...
[2025-04-19 23:41:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 23:41:25] Running /usr/bin/apptainer --version
[2025-04-19 23:41:25] apptainer version 1.3.6-6.1
[2025-04-19 23:41:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 23:41:25] thA385
[2025-04-19 23:41:25] apptainer works
[2025-04-19 23:41:25] Set ATHENA_PROC_NUMBER=3
[2025-04-19 23:41:25] Set ATHENA_CORE_NUMBER=3
[2025-04-19 23:41:25] Starting ATLAS job with PandaID=6607788644
[2025-04-19 23:41:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 01:08:42]  *** The last 200 lines of the pilot log: ***
[2025-04-20 01:08:42]  filesize=222123
[2025-04-20 01:08:42]  filetype=log
[2025-04-20 01:08:42]  guid=b08c94f1-018b-467f-8829-b6659ac17cc6
[2025-04-20 01:08:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-20 01:08:42]  is_altstaged=None
[2025-04-20 01:08:42]  is_tar=False
[2025-04-20 01:08:42]  lfn=log.44075483._082593.job.log.tgz.1
[2025-04-20 01:08:42]  mtime=0
[2025-04-20 01:08:42]  protocol_id=None
[2025-04-20 01:08:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 01:08:42]  replicas=None
[2025-04-20 01:08:42]  scope=mc23_13p6TeV
[2025-04-20 01:08:42]  status=None
[2025-04-20 01:08:42]  status_code=0
[2025-04-20 01:08:42]  storage_token=
[2025-04-20 01:08:42]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607788644/log.44075483._082593.job.log.tgz.1
[2025-04-20 01:08:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/ad/log.44075483._082593.job.log.tgz.1
[2025-04-20 01:08:42]  workdir=None
[2025-04-20 01:08:42] ]
[2025-04-20 01:08:42] 2025-04-19 23:08:18,195 | INFO     | transferring file log.44075483._082593.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607788644/log.44075483._082593.job.log.tgz.1 to /local/data/boinc/
[2025-04-20 01:08:42] 2025-04-19 23:08:18,195 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607788644/log.44075483._082593.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0825
[2025-04-20 01:08:42] 2025-04-19 23:08:18,209 | INFO     | adding to output.list: log.44075483._082593.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/ad/log.44075483._082593.job.log.tg
[2025-04-20 01:08:42] 2025-04-19 23:08:18,209 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 01:08:42] 2025-04-19 23:08:18,209 | INFO     | summary of transferred files:
[2025-04-20 01:08:42] 2025-04-19 23:08:18,209 | INFO     |  -- lfn=log.44075483._082593.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 01:08:42] 2025-04-19 23:08:18,210 | INFO     | stage-out finished correctly
[2025-04-20 01:08:42] 2025-04-19 23:08:18,558 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 01:08:42] 2025-04-19 23:08:19,224 | INFO     | monitor loop #401: job 0:6607788644 is in state 'finished'
[2025-04-20 01:08:42] 2025-04-19 23:08:19,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 01:08:42] 2025-04-19 23:08:19,641 | INFO     | job 6607788644 has state=finished
[2025-04-20 01:08:42] 2025-04-19 23:08:19,641 | INFO     | preparing for final server update for job 6607788644 in state='finished'
[2025-04-20 01:08:42] 2025-04-19 23:08:19,642 | INFO     | this job has now completed (state=finished)
[2025-04-20 01:08:42] 2025-04-19 23:08:19,642 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 01:08:42] 2025-04-19 23:08:19,642 | INFO     | log transfer has been attempted: DONE
[2025-04-20 01:08:42] 2025-04-19 23:08:19,642 | INFO     | job 6607788644 has finished - writing final server update
[2025-04-20 01:08:42] 2025-04-19 23:08:19,642 | INFO     | total number of processed events: 400 (read)
[2025-04-20 01:08:42] 2025-04-19 23:08:19,643 | INFO     | executing command: lscpu
[2025-04-20 01:08:42] 2025-04-19 23:08:19,659 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 01:08:42] 2025-04-19 23:08:21,727 | INFO     | monitor loop #402: job 0:6607788644 is in state 'finished'
[2025-04-20 01:08:42] 2025-04-19 23:08:21,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 01:08:42] 2025-04-19 23:08:23,251 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 01:08:42] 2025-04-19 23:08:23,251 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607788644/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 01:08:42] 2025-04-19 23:08:23,251 | INFO     | extracted standard info from prmon json
[2025-04-20 01:08:42] 2025-04-19 23:08:23,251 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 01:08:42] 2025-04-19 23:08:23,251 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 01:08:42] 2025-04-19 23:08:23,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 01:08:42] 2025-04-19 23:08:23,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 01:08:42] 2025-04-19 23:08:23,252 | INFO     | fitting pss+swap vs Time
[2025-04-20 01:08:42] 2025-04-19 23:08:23,252 | INFO     | sum of square deviations: 147126479.5
[2025-04-20 01:08:42] 2025-04-19 23:08:23,252 | INFO     | sum of deviations: 4134515584.0000014
[2025-04-20 01:08:42] 2025-04-19 23:08:23,252 | INFO     | mean x: 1745101564.5
[2025-04-20 01:08:42] 2025-04-19 23:08:23,252 | INFO     | mean y: 2356436.8974358975
[2025-04-20 01:08:42] 2025-04-19 23:08:23,252 | INFO     | -- intersect: -49038099357.3842
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | intersect: -49038099357.3842
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | chi2: 1.432111599723508
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | -- intersect: -49038099357.3842
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | current memory leak: 28.10 B/s (using 78 data points, chi2=1.43)
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | ..............................
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | . Timing measurements:
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | . get job = 0 s
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | . initial setup = 1 s
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | . payload setup = 3 s
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | . stage-in = 0 s
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | . payload execution = 5187 s
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | . stage-out = 0 s
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | . log creation = 0 s
[2025-04-20 01:08:42] 2025-04-19 23:08:23,253 | INFO     | ..............................
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | 
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | job summary report
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | --------------------------------------------------
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | PanDA job id: 6607788644
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | task id: 44075483
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | errors: (none)
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | pilot state: finished 
[2025-04-20 01:08:42] 2025-04-19 23:08:23,537 | INFO     | transexitcode: 0
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | exeerrorcode: 0
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | exeerrordiag: 
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | exitcode: 0
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | exitmsg: OK
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | cpuconsumptiontime: 13630 s
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | nevents: 400
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | neventsw: 0
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | pid: 2002351
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | pgrp: 2002351
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | corecount: 3
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | event service: False
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | sizes: {0: 2426827, 3: 2427033, 11: 2427061, 5193: 2462525, 5194: 2462525, 5198: 2462695}
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | --------------------------------------------------
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | 
[2025-04-20 01:08:42] 2025-04-19 23:08:23,538 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-20 01:08:42] 2025-04-19 23:08:23,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | job 6607788644 has completed (purged errors)
[2025-04-20 01:08:42] 2025-04-19 23:08:23,554 | INFO     | overall cleanup function is called
[2025-04-20 01:08:42] 2025-04-19 23:08:24,561 | INFO     | --- collectZombieJob: --- 10, [2002351]
[2025-04-20 01:08:42] 2025-04-19 23:08:24,561 | INFO     | zombie collector waiting for pid 2002351
[2025-04-20 01:08:42] 2025-04-19 23:08:24,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 01:08:42] 2025-04-19 23:08:24,561 | INFO     | collected zombie processes
[2025-04-20 01:08:42] 2025-04-19 23:08:24,561 | INFO     | will attempt to kill all subprocesses of pid=2002351
[2025-04-20 01:08:42] 2025-04-19 23:08:24,602 | INFO     | process IDs to be killed: [2002351] (in reverse order)
[2025-04-20 01:08:42] 2025-04-19 23:08:24,628 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 01:08:42] 2025-04-19 23:08:24,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 01:08:42] 2025-04-19 23:08:24,629 | INFO     | did not find any defunct processes belonging to 2002351
[2025-04-20 01:08:42] 2025-04-19 23:08:24,630 | INFO     | did not find any defunct processes belonging to 2002351
[2025-04-20 01:08:42] 2025-04-19 23:08:24,630 | INFO     | ready for new job
[2025-04-20 01:08:42] 2025-04-19 23:08:24,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 01:08:42] 2025-04-19 23:08:24,631 | INFO     | **************************************
[2025-04-20 01:08:42] 2025-04-19 23:08:24,631 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 01:08:42] 2025-04-19 23:08:24,631 | INFO     | **************************************
[2025-04-20 01:08:42] 2025-04-19 23:08:24,631 | INFO     | 
[2025-04-20 01:08:42] 2025-04-19 23:08:24,631 | INFO     | architecture information:
[2025-04-20 01:08:42] 2025-04-19 23:08:24,631 | INFO     | executing command: cat /etc/os-release
[2025-04-20 01:08:42] 2025-04-19 23:08:24,640 | INFO     | cat /etc/os-release:
[2025-04-20 01:08:42] NAME="CentOS Linux"
[2025-04-20 01:08:42] VERSION="7 (Core)"
[2025-04-20 01:08:42] ID="centos"
[2025-04-20 01:08:42] ID_LIKE="rhel fedora"
[2025-04-20 01:08:42] VERSION_ID="7"
[2025-04-20 01:08:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 01:08:42] ANSI_COLOR="0;31"
[2025-04-20 01:08:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 01:08:42] HOME_URL="https://www.centos.org/"
[2025-04-20 01:08:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 01:08:42] 
[2025-04-20 01:08:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 01:08:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 01:08:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 01:08:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 01:08:42] 
[2025-04-20 01:08:42] 2025-04-19 23:08:24,641 | INFO     | **************************************
[2025-04-20 01:08:42] 2025-04-19 23:08:25,144 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-20 01:08:42] 2025-04-19 23:08:25,156 | INFO     | sufficient remaining disk space (375867310080 B)
[2025-04-20 01:08:42] 2025-04-19 23:08:25,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 01:08:42] 2025-04-19 23:08:25,156 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 01:08:42] 2025-04-19 23:08:25,156 | INFO     | update_server=False
[2025-04-20 01:08:42] 2025-04-19 23:08:25,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 01:08:42] 2025-04-19 23:08:25,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 01:08:42] 2025-04-19 23:08:25,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 01:08:42] 2025-04-19 23:08:25,211 | INFO     | all payload control threads have been joined
[2025-04-20 01:08:42] 2025-04-19 23:08:25,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 01:08:42] 2025-04-19 23:08:25,236 | INFO     | aborting loop
[2025-04-20 01:08:42] 2025-04-19 23:08:25,526 | INFO     | all job control threads have been joined
[2025-04-20 01:08:42] 2025-04-19 23:08:26,006 | INFO     | all data control threads have been joined
[2025-04-20 01:08:42] 2025-04-19 23:08:26,113 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 01:08:42] 2025-04-19 23:08:26,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 01:08:42] 2025-04-19 23:08:26,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 01:08:42] 2025-04-19 23:08:26,162 | INFO     | [job] retrieve thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:26,162 | INFO     | [job] queue monitor thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:26,216 | INFO     | [payload] control thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:26,242 | INFO     | [job] job monitor thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:26,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 01:08:42] 2025-04-19 23:08:26,531 | INFO     | [job] control thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:26,557 | INFO     | [payload] failed_post thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:26,862 | INFO     | [data] copytool_in thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:26,937 | INFO     | [payload] validate_post thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:27,012 | INFO     | [data] control thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:27,186 | INFO     | [job] validate thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:27,351 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:27,557 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:27,658 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:28,259 | INFO     | [data] copytool_out thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:29,164 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:35,666 | INFO     | job.realtimelogging is not enabled
[2025-04-20 01:08:42] 2025-04-19 23:08:36,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 01:08:42] 2025-04-19 23:08:37,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711494776640)>', '<ExcThread(monitor, started 140710636414720)>']
[2025-04-20 01:08:42] 2025-04-19 23:08:38,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 01:08:42] 2025-04-19 23:08:38,178 | INFO     | [monitor] control thread has ended
[2025-04-20 01:08:42] 2025-04-19 23:08:42,457 | INFO     | all workflow threads have been joined
[2025-04-20 01:08:42] 2025-04-19 23:08:42,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 01:08:42] 2025-04-19 23:08:42,458 | INFO     | traces error code: 0
[2025-04-20 01:08:42] 2025-04-19 23:08:42,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 01:08:42] 2025-04-19 23:08:42,509 [wrapper] ==== pilot stdout END ====
[2025-04-20 01:08:42] 2025-04-19 23:08:42,511 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 01:08:42] 2025-04-19 23:08:42,514 [wrapper] pilotpid: 1995908
[2025-04-20 01:08:42] 2025-04-19 23:08:42,516 [wrapper] Pilot exit status: 0
[2025-04-20 01:08:42] 2025-04-19 23:08:42,524 [wrapper] pandaids: 6607788644
[2025-04-20 01:08:42] 2025-04-19 23:08:42,541 [wrapper] cleanup supervisor_pilot 2014520 1995909
[2025-04-20 01:08:42] 2025-04-19 23:08:42,543 [wrapper] Test setup, not cleaning
[2025-04-20 01:08:42] 2025-04-19 23:08:42,546 [wrapper] apfmon messages muted
[2025-04-20 01:08:42] 2025-04-19 23:08:42,548 [wrapper] ==== wrapper stdout END ====
[2025-04-20 01:08:42] 2025-04-19 23:08:42,551 [wrapper] ==== wrapper stderr END ====
[2025-04-20 01:08:42]  *** Error codes and diagnostics ***
[2025-04-20 01:08:42]     "exeErrorCode": 0,
[2025-04-20 01:08:42]     "exeErrorDiag": "",
[2025-04-20 01:08:42]     "pilotErrorCode": 0,
[2025-04-20 01:08:42]     "pilotErrorDiag": "",
[2025-04-20 01:08:42]  *** Listing of results directory ***
[2025-04-20 01:08:42] total 407652
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc    495897 Apr 19 13:58 pilot3.tar.gz
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc      5111 Apr 19 14:14 queuedata.json
[2025-04-20 01:08:42] -rwx------ 1 boinc boinc     37140 Apr 19 14:15 runpilot2-wrapper.sh
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc       100 Apr 19 23:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 01:08:42] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 23:41 run_atlas
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc       105 Apr 19 23:41 job.xml
[2025-04-20 01:08:42] -rw-r--r-- 2 boinc boinc 225312307 Apr 19 23:41 EVNT.44075481._003202.pool.root.1
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc      6929 Apr 19 23:41 init_data.xml
[2025-04-20 01:08:42] drwxrwx--x 2 boinc boinc      4096 Apr 19 23:41 shared
[2025-04-20 01:08:42] -rw-r--r-- 2 boinc boinc    508896 Apr 19 23:41 input.tar.gz
[2025-04-20 01:08:42] -rw-r--r-- 2 boinc boinc     17569 Apr 19 23:41 start_atlas.sh
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc         0 Apr 19 23:41 boinc_lockfile
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc      2579 Apr 19 23:41 pandaJob.out
[2025-04-20 01:08:42] -rw------- 1 boinc boinc       424 Apr 19 23:41 setup.sh.local
[2025-04-20 01:08:42] -rw------- 1 boinc boinc    991292 Apr 19 23:41 agis_schedconf.cvmfs.json
[2025-04-20 01:08:42] -rw------- 1 boinc boinc   1618536 Apr 19 23:41 agis_ddmendpoints.agis.ALL.json
[2025-04-20 01:08:42] drwx------ 4 boinc boinc      4096 Apr 19 23:41 pilot3
[2025-04-20 01:08:42] -rw------- 1 boinc boinc        95 Apr 20 01:07 pilot_heartbeat.json
[2025-04-20 01:08:42] -rw------- 1 boinc boinc 186794694 Apr 20 01:08 HITS.44075483._082593.pool.root.1
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc       529 Apr 20 01:08 boinc_task_state.xml
[2025-04-20 01:08:42] -rw------- 1 boinc boinc      1020 Apr 20 01:08 memory_monitor_summary.json
[2025-04-20 01:08:42] -rw------- 1 boinc boinc    222123 Apr 20 01:08 log.44075483._082593.job.log.tgz.1
[2025-04-20 01:08:42] -rw------- 1 boinc boinc      7654 Apr 20 01:08 heartbeat.json
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc      8192 Apr 20 01:08 boinc_mmap_file
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc        27 Apr 20 01:08 wrapper_checkpoint.txt
[2025-04-20 01:08:42] -rw------- 1 boinc boinc      4429 Apr 20 01:08 pilotlog.txt
[2025-04-20 01:08:42] -rw------- 1 boinc boinc    504540 Apr 20 01:08 log.44075483._082593.job.log.1
[2025-04-20 01:08:42] -rw------- 1 boinc boinc       357 Apr 20 01:08 output.list
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc       620 Apr 20 01:08 runtime_log
[2025-04-20 01:08:42] -rw------- 1 boinc boinc    747520 Apr 20 01:08 result.tar.gz
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc     11099 Apr 20 01:08 runtime_log.err
[2025-04-20 01:08:42] -rw------- 1 boinc boinc       658 Apr 20 01:08 Z7mMDmNHMQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmfshLDmifQQGm.diag
[2025-04-20 01:08:42] -rw-r--r-- 1 boinc boinc     21065 Apr 20 01:08 stderr.txt
[2025-04-20 01:08:42] HITS file was successfully produced:
[2025-04-20 01:08:42] -rw------- 1 boinc boinc 186794694 Apr 20 01:08 shared/HITS.pool.root.1
[2025-04-20 01:08:42]  *** Contents of shared directory: ***
[2025-04-20 01:08:42] total 403712
[2025-04-20 01:08:42] -rw-r--r-- 2 boinc boinc 225312307 Apr 19 23:41 ATLAS.root_0
[2025-04-20 01:08:42] -rw-r--r-- 2 boinc boinc    508896 Apr 19 23:41 input.tar.gz
[2025-04-20 01:08:42] -rw-r--r-- 2 boinc boinc     17569 Apr 19 23:41 start_atlas.sh
[2025-04-20 01:08:42] -rw------- 1 boinc boinc 186794694 Apr 20 01:08 HITS.pool.root.1
[2025-04-20 01:08:42] -rw------- 1 boinc boinc    747520 Apr 20 01:08 result.tar.gz
01:08:44 (1992260): run_atlas exited; CPU time 13648.421231
01:08:44 (1992260): called boinc_finish(0)

</stderr_txt>
]]>

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