Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:59:19 (17055): wrapper (7.7.26015): starting
10:59:19 (17055): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 10:59:19] Arguments: --nthreads 12
[2025-04-19 10:59:19] Threads: 12
[2025-04-19 10:59:19] Checking for CVMFS
[2025-04-19 10:59:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:59:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:59:19] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:59:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:59:19] 2.11.2.0 20204 375349 165712 145041 2 58 10440610 20275200 1 130560 0 23894329 99.970 7770061 50650 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 10:59:19] CVMFS is ok
[2025-04-19 10:59:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 10:59:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 10:59:19] Further information can be found at the LHC@home message board.
[2025-04-19 10:59:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:59:19] Checking for apptainer binary...
[2025-04-19 10:59:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:59:19] Running /usr/bin/apptainer --version
[2025-04-19 10:59:19] apptainer version 1.3.2-1.el7
[2025-04-19 10:59:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:59:20] c-205-28.aglt2.org
[2025-04-19 10:59:20] apptainer works
[2025-04-19 10:59:20] Set ATHENA_PROC_NUMBER=12
[2025-04-19 10:59:20] Set ATHENA_CORE_NUMBER=12
[2025-04-19 10:59:20] Starting ATLAS job with PandaID=6607788134
[2025-04-19 10:59:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 12:23:59]  *** The last 200 lines of the pilot log: ***
[2025-04-19 12:23:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 12:23:59]  is_altstaged=None
[2025-04-19 12:23:59]  is_tar=False
[2025-04-19 12:23:59]  lfn=log.44075483._082519.job.log.tgz.1
[2025-04-19 12:23:59]  mtime=0
[2025-04-19 12:23:59]  protocol_id=None
[2025-04-19 12:23:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 12:23:59]  replicas=None
[2025-04-19 12:23:59]  scope=mc23_13p6TeV
[2025-04-19 12:23:59]  status=None
[2025-04-19 12:23:59]  status_code=0
[2025-04-19 12:23:59]  storage_token=
[2025-04-19 12:23:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6607788134/log.44075483._082519.job.log.tgz.1
[2025-04-19 12:23:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/e7/log.44075483._082519.job.log.tgz.1
[2025-04-19 12:23:59]  workdir=None
[2025-04-19 12:23:59] ]
[2025-04-19 12:23:59] 2025-04-19 16:23:31,359 | INFO     | transferring file log.44075483._082519.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607788134/log.44075483._082519.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 12:23:59] 2025-04-19 16:23:31,359 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607788134/log.44075483._082519.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._082519.job
[2025-04-19 12:23:59] 2025-04-19 16:23:31,381 | INFO     | adding to output.list: log.44075483._082519.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/e7/log.44075483._082519.job.log.tg
[2025-04-19 12:23:59] 2025-04-19 16:23:31,382 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 12:23:59] 2025-04-19 16:23:31,382 | INFO     | summary of transferred files:
[2025-04-19 12:23:59] 2025-04-19 16:23:31,382 | INFO     |  -- lfn=log.44075483._082519.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 12:23:59] 2025-04-19 16:23:31,383 | INFO     | stage-out finished correctly
[2025-04-19 12:23:59] 2025-04-19 16:23:31,537 | INFO     | monitor loop #376: job 0:6607788134 is in state 'finished'
[2025-04-19 12:23:59] 2025-04-19 16:23:31,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 12:23:59] 2025-04-19 16:23:33,033 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 12:23:59] 2025-04-19 16:23:33,673 | INFO     | job 6607788134 has state=finished
[2025-04-19 12:23:59] 2025-04-19 16:23:33,674 | INFO     | preparing for final server update for job 6607788134 in state='finished'
[2025-04-19 12:23:59] 2025-04-19 16:23:33,674 | INFO     | this job has now completed (state=finished)
[2025-04-19 12:23:59] 2025-04-19 16:23:33,675 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 12:23:59] 2025-04-19 16:23:33,675 | INFO     | log transfer has been attempted: DONE
[2025-04-19 12:23:59] 2025-04-19 16:23:33,675 | INFO     | job 6607788134 has finished - writing final server update
[2025-04-19 12:23:59] 2025-04-19 16:23:33,675 | INFO     | total number of processed events: 400 (read)
[2025-04-19 12:23:59] 2025-04-19 16:23:33,676 | INFO     | executing command: lscpu
[2025-04-19 12:23:59] 2025-04-19 16:23:33,705 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 12:23:59] 2025-04-19 16:23:34,040 | INFO     | monitor loop #377: job 0:6607788134 is in state 'finished'
[2025-04-19 12:23:59] 2025-04-19 16:23:34,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 12:23:59] 2025-04-19 16:23:36,543 | INFO     | monitor loop #378: job 0:6607788134 is in state 'finished'
[2025-04-19 12:23:59] 2025-04-19 16:23:36,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 12:23:59] 2025-04-19 16:23:38,513 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 12:23:59] 2025-04-19 16:23:38,514 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607788134/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 12:23:59] 2025-04-19 16:23:38,514 | INFO     | extracted standard info from prmon json
[2025-04-19 12:23:59] 2025-04-19 16:23:38,515 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 12:23:59] 2025-04-19 16:23:38,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 12:23:59] 2025-04-19 16:23:38,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 12:23:59] 2025-04-19 16:23:38,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 12:23:59] 2025-04-19 16:23:38,517 | INFO     | fitting pss+swap vs Time
[2025-04-19 12:23:59] 2025-04-19 16:23:38,517 | INFO     | sum of square deviations: 136095575.0
[2025-04-19 12:23:59] 2025-04-19 16:23:38,518 | INFO     | sum of deviations: 21942639644.0
[2025-04-19 12:23:59] 2025-04-19 16:23:38,518 | INFO     | mean x: 1745077396.5
[2025-04-19 12:23:59] 2025-04-19 16:23:38,518 | INFO     | mean y: 2541692.0
[2025-04-19 12:23:59] 2025-04-19 16:23:38,518 | INFO     | -- intersect: -281355646936.02264
[2025-04-19 12:23:59] 2025-04-19 16:23:38,518 | INFO     | intersect: -281355646936.02264
[2025-04-19 12:23:59] 2025-04-19 16:23:38,518 | INFO     | chi2: 1.9179558600670785
[2025-04-19 12:23:59] 2025-04-19 16:23:38,518 | INFO     | -- intersect: -281355646936.02264
[2025-04-19 12:23:59] 2025-04-19 16:23:38,519 | INFO     | current memory leak: 161.23 B/s (using 76 data points, chi2=1.92)
[2025-04-19 12:23:59] 2025-04-19 16:23:38,519 | INFO     | ..............................
[2025-04-19 12:23:59] 2025-04-19 16:23:38,519 | INFO     | . Timing measurements:
[2025-04-19 12:23:59] 2025-04-19 16:23:38,519 | INFO     | . get job = 0 s
[2025-04-19 12:23:59] 2025-04-19 16:23:38,519 | INFO     | . initial setup = 2 s
[2025-04-19 12:23:59] 2025-04-19 16:23:38,519 | INFO     | . payload setup = 7 s
[2025-04-19 12:23:59] 2025-04-19 16:23:38,520 | INFO     | . stage-in = 0 s
[2025-04-19 12:23:59] 2025-04-19 16:23:38,520 | INFO     | . payload execution = 5008 s
[2025-04-19 12:23:59] 2025-04-19 16:23:38,520 | INFO     | . stage-out = 0 s
[2025-04-19 12:23:59] 2025-04-19 16:23:38,520 | INFO     | . log creation = 0 s
[2025-04-19 12:23:59] 2025-04-19 16:23:38,520 | INFO     | ..............................
[2025-04-19 12:23:59] 2025-04-19 16:23:38,765 | INFO     | 
[2025-04-19 12:23:59] 2025-04-19 16:23:38,766 | INFO     | job summary report
[2025-04-19 12:23:59] 2025-04-19 16:23:38,766 | INFO     | --------------------------------------------------
[2025-04-19 12:23:59] 2025-04-19 16:23:38,766 | INFO     | PanDA job id: 6607788134
[2025-04-19 12:23:59] 2025-04-19 16:23:38,766 | INFO     | task id: 44075483
[2025-04-19 12:23:59] 2025-04-19 16:23:38,766 | INFO     | errors: (none)
[2025-04-19 12:23:59] 2025-04-19 16:23:38,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 12:23:59] 2025-04-19 16:23:38,766 | INFO     | pilot state: finished 
[2025-04-19 12:23:59] 2025-04-19 16:23:38,767 | INFO     | transexitcode: 0
[2025-04-19 12:23:59] 2025-04-19 16:23:38,767 | INFO     | exeerrorcode: 0
[2025-04-19 12:23:59] 2025-04-19 16:23:38,767 | INFO     | exeerrordiag: 
[2025-04-19 12:23:59] 2025-04-19 16:23:38,767 | INFO     | exitcode: 0
[2025-04-19 12:23:59] 2025-04-19 16:23:38,767 | INFO     | exitmsg: OK
[2025-04-19 12:23:59] 2025-04-19 16:23:38,767 | INFO     | cpuconsumptiontime: 47049 s
[2025-04-19 12:23:59] 2025-04-19 16:23:38,768 | INFO     | nevents: 400
[2025-04-19 12:23:59] 2025-04-19 16:23:38,768 | INFO     | neventsw: 0
[2025-04-19 12:23:59] 2025-04-19 16:23:38,768 | INFO     | pid: 27004
[2025-04-19 12:23:59] 2025-04-19 16:23:38,768 | INFO     | pgrp: 27004
[2025-04-19 12:23:59] 2025-04-19 16:23:38,768 | INFO     | corecount: 12
[2025-04-19 12:23:59] 2025-04-19 16:23:38,768 | INFO     | event service: False
[2025-04-19 12:23:59] 2025-04-19 16:23:38,769 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 5020: 2453263, 5021: 2462204, 5022: 2462260, 5028: 2462558}
[2025-04-19 12:23:59] 2025-04-19 16:23:38,769 | INFO     | --------------------------------------------------
[2025-04-19 12:23:59] 2025-04-19 16:23:38,769 | INFO     | 
[2025-04-19 12:23:59] 2025-04-19 16:23:38,769 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 12:23:59] 2025-04-19 16:23:38,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,795 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,795 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,795 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,797 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 12:23:59] 2025-04-19 16:23:38,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,797 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 12:23:59] 2025-04-19 16:23:38,798 | INFO     | job 6607788134 has completed (purged errors)
[2025-04-19 12:23:59] 2025-04-19 16:23:38,798 | INFO     | overall cleanup function is called
[2025-04-19 12:23:59] 2025-04-19 16:23:39,806 | INFO     | --- collectZombieJob: --- 10, [27004]
[2025-04-19 12:23:59] 2025-04-19 16:23:39,806 | INFO     | zombie collector waiting for pid 27004
[2025-04-19 12:23:59] 2025-04-19 16:23:39,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 12:23:59] 2025-04-19 16:23:39,806 | INFO     | collected zombie processes
[2025-04-19 12:23:59] 2025-04-19 16:23:39,806 | INFO     | will attempt to kill all subprocesses of pid=27004
[2025-04-19 12:23:59] 2025-04-19 16:23:39,897 | INFO     | process IDs to be killed: [27004] (in reverse order)
[2025-04-19 12:23:59] 2025-04-19 16:23:39,951 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 12:23:59] 2025-04-19 16:23:39,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 12:23:59] 2025-04-19 16:23:39,955 | INFO     | did not find any defunct processes belonging to 27004
[2025-04-19 12:23:59] 2025-04-19 16:23:39,958 | INFO     | did not find any defunct processes belonging to 27004
[2025-04-19 12:23:59] 2025-04-19 16:23:39,958 | INFO     | ready for new job
[2025-04-19 12:23:59] 2025-04-19 16:23:39,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 12:23:59] 2025-04-19 16:23:39,959 | INFO     | **************************************
[2025-04-19 12:23:59] 2025-04-19 16:23:39,960 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 12:23:59] 2025-04-19 16:23:39,960 | INFO     | **************************************
[2025-04-19 12:23:59] 2025-04-19 16:23:39,960 | INFO     | 
[2025-04-19 12:23:59] 2025-04-19 16:23:39,960 | INFO     | architecture information:
[2025-04-19 12:23:59] 2025-04-19 16:23:39,961 | INFO     | executing command: cat /etc/os-release
[2025-04-19 12:23:59] 2025-04-19 16:23:39,977 | INFO     | cat /etc/os-release:
[2025-04-19 12:23:59] NAME="CentOS Linux"
[2025-04-19 12:23:59] VERSION="7 (Core)"
[2025-04-19 12:23:59] ID="centos"
[2025-04-19 12:23:59] ID_LIKE="rhel fedora"
[2025-04-19 12:23:59] VERSION_ID="7"
[2025-04-19 12:23:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 12:23:59] ANSI_COLOR="0;31"
[2025-04-19 12:23:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 12:23:59] HOME_URL="https://www.centos.org/"
[2025-04-19 12:23:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 12:23:59] 
[2025-04-19 12:23:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 12:23:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 12:23:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 12:23:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 12:23:59] 
[2025-04-19 12:23:59] 2025-04-19 16:23:39,977 | INFO     | **************************************
[2025-04-19 12:23:59] 2025-04-19 16:23:40,478 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 12:23:59] 2025-04-19 16:23:40,547 | INFO     | sufficient remaining disk space (29394731008 B)
[2025-04-19 12:23:59] 2025-04-19 16:23:40,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 12:23:59] 2025-04-19 16:23:40,548 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 12:23:59] 2025-04-19 16:23:40,548 | INFO     | update_server=False
[2025-04-19 12:23:59] 2025-04-19 16:23:40,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 12:23:59] 2025-04-19 16:23:40,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:23:59] 2025-04-19 16:23:40,549 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 12:23:59] 2025-04-19 16:23:40,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:23:59] 2025-04-19 16:23:40,550 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 12:23:59] 2025-04-19 16:23:40,550 | INFO     | aborting loop
[2025-04-19 12:23:59] 2025-04-19 16:23:40,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 12:23:59] 2025-04-19 16:23:40,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 12:23:59] 2025-04-19 16:23:41,408 | INFO     | all data control threads have been joined
[2025-04-19 12:23:59] 2025-04-19 16:23:41,552 | INFO     | [job] job monitor thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:41,554 | INFO     | [job] retrieve thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:41,554 | INFO     | [job] queue monitor thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:41,771 | INFO     | all job control threads have been joined
[2025-04-19 12:23:59] 2025-04-19 16:23:41,781 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:41,788 | INFO     | [payload] failed_post thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:41,844 | INFO     | all payload control threads have been joined
[2025-04-19 12:23:59] 2025-04-19 16:23:41,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 12:23:59] 2025-04-19 16:23:42,050 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:42,265 | INFO     | [data] copytool_in thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:42,414 | INFO     | [data] control thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:42,617 | INFO     | [job] validate thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:42,777 | INFO     | [job] control thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:42,833 | INFO     | [payload] validate_post thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:42,846 | INFO     | [payload] control thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:42,982 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:43,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 12:23:59] 2025-04-19 16:23:43,986 | INFO     | [data] copytool_out thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:47,628 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:51,297 | INFO     | job.realtimelogging is not enabled
[2025-04-19 12:23:59] 2025-04-19 16:23:52,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 12:23:59] 2025-04-19 16:23:53,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140160960620352)>', '<ExcThread(monitor, started 140160066901760)>']
[2025-04-19 12:23:59] 2025-04-19 16:23:54,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 12:23:59] 2025-04-19 16:23:54,614 | INFO     | [monitor] control thread has ended
[2025-04-19 12:23:59] 2025-04-19 16:23:58,845 | INFO     | all workflow threads have been joined
[2025-04-19 12:23:59] 2025-04-19 16:23:58,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 12:23:59] 2025-04-19 16:23:58,851 | INFO     | traces error code: 0
[2025-04-19 12:23:59] 2025-04-19 16:23:58,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 12:23:59] 2025-04-19 16:23:58,944 [wrapper] ==== pilot stdout END ====
[2025-04-19 12:23:59] 2025-04-19 16:23:58,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 12:23:59] 2025-04-19 16:23:58,952 [wrapper] pilotpid: 20654
[2025-04-19 12:23:59] 2025-04-19 16:23:58,956 [wrapper] Pilot exit status: 0
[2025-04-19 12:23:59] 2025-04-19 16:23:58,970 [wrapper] pandaids: 6607788134
[2025-04-19 12:23:59] 2025-04-19 16:23:59,009 [wrapper] cleanup supervisor_pilot  8359 20655
[2025-04-19 12:23:59] 2025-04-19 16:23:59,013 [wrapper] Test setup, not cleaning
[2025-04-19 12:23:59] 2025-04-19 16:23:59,017 [wrapper] apfmon messages muted
[2025-04-19 12:23:59] 2025-04-19 16:23:59,021 [wrapper] ==== wrapper stdout END ====
[2025-04-19 12:23:59] 2025-04-19 16:23:59,025 [wrapper] ==== wrapper stderr END ====
[2025-04-19 12:23:59]  *** Error codes and diagnostics ***
[2025-04-19 12:23:59]     "exeErrorCode": 0,
[2025-04-19 12:23:59]     "exeErrorDiag": "",
[2025-04-19 12:23:59]     "pilotErrorCode": 0,
[2025-04-19 12:23:59]     "pilotErrorDiag": "",
[2025-04-19 12:23:59]  *** Listing of results directory ***
[2025-04-19 12:23:59] total 416376
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 07:58 pilot3.tar.gz
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 08:04 queuedata.json
[2025-04-19 12:23:59] -rwx------ 1 boincer umatlas     37140 Apr 19 08:08 runpilot2-wrapper.sh
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas       100 Apr 19 10:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 12:23:59] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 10:59 run_atlas
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas       105 Apr 19 10:59 job.xml
[2025-04-19 12:23:59] -rw-r--r-- 2 boincer umatlas 223574858 Apr 19 10:59 EVNT.44075481._003199.pool.root.1
[2025-04-19 12:23:59] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 10:59 start_atlas.sh
[2025-04-19 12:23:59] drwxrwx--x 2 boincer umatlas      4096 Apr 19 10:59 shared
[2025-04-19 12:23:59] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 10:59 input.tar.gz
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas         0 Apr 19 10:59 boinc_lockfile
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 10:59 pandaJob.out
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas       424 Apr 19 10:59 setup.sh.local
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas    991300 Apr 19 10:59 agis_schedconf.cvmfs.json
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas   1618536 Apr 19 10:59 agis_ddmendpoints.agis.ALL.json
[2025-04-19 12:23:59] drwx------ 4 boincer umatlas      4096 Apr 19 10:59 pilot3
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas      5867 Apr 19 12:19 init_data.xml
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas 197266483 Apr 19 12:22 HITS.44075483._082519.pool.root.1
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas       529 Apr 19 12:23 boinc_task_state.xml
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas      1050 Apr 19 12:23 memory_monitor_summary.json
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas    354777 Apr 19 12:23 log.44075483._082519.job.log.tgz.1
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas        95 Apr 19 12:23 pilot_heartbeat.json
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas      7754 Apr 19 12:23 heartbeat.json
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas        27 Apr 19 12:23 wrapper_checkpoint.txt
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 12:23 boinc_mmap_file
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas      4548 Apr 19 12:23 pilotlog.txt
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas    478110 Apr 19 12:23 log.44075483._082519.job.log.1
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas       357 Apr 19 12:23 output.list
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas       620 Apr 19 12:23 runtime_log
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas    849920 Apr 19 12:23 result.tar.gz
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 12:23 runtime_log.err
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas       658 Apr 19 12:23 k79MDmxAMQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrrhLDmCndvrm.diag
[2025-04-19 12:23:59] -rw-r--r-- 1 boincer umatlas     21328 Apr 19 12:23 stderr.txt
[2025-04-19 12:23:59] HITS file was successfully produced:
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas 197266483 Apr 19 12:22 shared/HITS.pool.root.1
[2025-04-19 12:23:59]  *** Contents of shared directory: ***
[2025-04-19 12:23:59] total 412336
[2025-04-19 12:23:59] -rw-r--r-- 2 boincer umatlas 223574858 Apr 19 10:59 ATLAS.root_0
[2025-04-19 12:23:59] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 10:59 start_atlas.sh
[2025-04-19 12:23:59] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 10:59 input.tar.gz
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas 197266483 Apr 19 12:22 HITS.pool.root.1
[2025-04-19 12:23:59] -rw------- 1 boincer umatlas    849920 Apr 19 12:23 result.tar.gz
12:24:00 (17055): run_atlas exited; CPU time 47031.086710
12:24:00 (17055): called boinc_finish(0)

</stderr_txt>
]]>

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