Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:56 (230339): wrapper (7.7.26015): starting
01:40:56 (230339): wrapper: running run_atlas (--nthreads 8)
[2025-04-20 01:40:56] Arguments: --nthreads 8
[2025-04-20 01:40:56] Threads: 8
[2025-04-20 01:40:56] Checking for CVMFS
[2025-04-20 01:40:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-20 01:40:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-20 01:40:56] Running cvmfs_config stat atlas.cern.ch
[2025-04-20 01:40:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-20 01:40:56] 2.12.7.0 2390 640 69844 145066 1 56 3696231 4096000 0 130560 0 617254 99.993 158377 14366 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://10.0.0.2:3128 1
[2025-04-20 01:40:56] CVMFS is ok
[2025-04-20 01:40:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-20 01:40:56] Checking for apptainer binary...
[2025-04-20 01:40:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-20 01:40:56] Running /usr/bin/apptainer --version
[2025-04-20 01:40:56] apptainer version 1.4.0-1.el9
[2025-04-20 01:40:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-20 01:40:56] rcruncher-D
[2025-04-20 01:40:56] apptainer works
[2025-04-20 01:40:56] Set ATHENA_PROC_NUMBER=8
[2025-04-20 01:40:56] Set ATHENA_CORE_NUMBER=8
[2025-04-20 01:40:56] Starting ATLAS job with PandaID=6607788097
[2025-04-20 01:40:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 03:01:24]  *** The last 200 lines of the pilot log: ***
[2025-04-20 03:01:24]  is_altstaged=None
[2025-04-20 03:01:24]  is_tar=False
[2025-04-20 03:01:24]  lfn=log.44075483._082482.job.log.tgz.1
[2025-04-20 03:01:24]  mtime=0
[2025-04-20 03:01:24]  protocol_id=None
[2025-04-20 03:01:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-20 03:01:24]  replicas=None
[2025-04-20 03:01:24]  scope=mc23_13p6TeV
[2025-04-20 03:01:24]  status=None
[2025-04-20 03:01:24]  status_code=0
[2025-04-20 03:01:24]  storage_token=
[2025-04-20 03:01:24]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6607788097/log.44075483._082482.job.log.tgz.1
[2025-04-20 03:01:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/f1/log.44075483._082482.job.log.tgz.1
[2025-04-20 03:01:24]  workdir=None
[2025-04-20 03:01:24] ]
[2025-04-20 03:01:24] 2025-04-20 08:00:57,602 | INFO     | transferring file log.44075483._082482.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6607788097/log.44075483._082482.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-20 03:01:24] 2025-04-20 08:00:57,602 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6607788097/log.44075483._082482.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._082482.job
[2025-04-20 03:01:24] 2025-04-20 08:00:57,614 | INFO     | adding to output.list: log.44075483._082482.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/f1/log.44075483._082482.job.log.tg
[2025-04-20 03:01:24] 2025-04-20 08:00:57,614 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-20 03:01:24] 2025-04-20 08:00:57,615 | INFO     | summary of transferred files:
[2025-04-20 03:01:24] 2025-04-20 08:00:57,615 | INFO     |  -- lfn=log.44075483._082482.job.log.tgz.1, status_code=0, status=transferred
[2025-04-20 03:01:24] 2025-04-20 08:00:57,615 | INFO     | stage-out finished correctly
[2025-04-20 03:01:24] 2025-04-20 08:00:59,094 | INFO     | monitor loop #366: job 0:6607788097 is in state 'finished'
[2025-04-20 03:01:24] 2025-04-20 08:00:59,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 03:01:24] 2025-04-20 08:00:59,646 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-20 03:01:24] 2025-04-20 08:00:59,718 | INFO     | job 6607788097 has state=finished
[2025-04-20 03:01:24] 2025-04-20 08:00:59,718 | INFO     | preparing for final server update for job 6607788097 in state='finished'
[2025-04-20 03:01:24] 2025-04-20 08:00:59,719 | INFO     | this job has now completed (state=finished)
[2025-04-20 03:01:24] 2025-04-20 08:00:59,719 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-20 03:01:24] 2025-04-20 08:00:59,719 | INFO     | log transfer has been attempted: DONE
[2025-04-20 03:01:24] 2025-04-20 08:00:59,719 | INFO     | job 6607788097 has finished - writing final server update
[2025-04-20 03:01:24] 2025-04-20 08:00:59,719 | INFO     | total number of processed events: 400 (read)
[2025-04-20 03:01:24] 2025-04-20 08:00:59,722 | INFO     | executing command: lscpu
[2025-04-20 03:01:24] 2025-04-20 08:00:59,743 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-20 03:01:24] 2025-04-20 08:01:01,597 | INFO     | monitor loop #367: job 0:6607788097 is in state 'finished'
[2025-04-20 03:01:24] 2025-04-20 08:01:01,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 03:01:24] 2025-04-20 08:01:04,100 | INFO     | monitor loop #368: job 0:6607788097 is in state 'finished'
[2025-04-20 03:01:24] 2025-04-20 08:01:04,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 03:01:24] 2025-04-20 08:01:04,893 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 03:01:24] 2025-04-20 08:01:04,894 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6607788097/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 03:01:24] 2025-04-20 08:01:04,894 | INFO     | extracted standard info from prmon json
[2025-04-20 03:01:24] 2025-04-20 08:01:04,895 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 03:01:24] 2025-04-20 08:01:04,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 03:01:24] 2025-04-20 08:01:04,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 03:01:24] 2025-04-20 08:01:04,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 03:01:24] 2025-04-20 08:01:04,897 | INFO     | fitting pss+swap vs Time
[2025-04-20 03:01:24] 2025-04-20 08:01:04,897 | INFO     | sum of square deviations: 115715658.0
[2025-04-20 03:01:24] 2025-04-20 08:01:04,897 | INFO     | sum of deviations: 6270103441.000006
[2025-04-20 03:01:24] 2025-04-20 08:01:04,897 | INFO     | mean x: 1745133759.5
[2025-04-20 03:01:24] 2025-04-20 08:01:04,897 | INFO     | mean y: 2580223.9166666665
[2025-04-20 03:01:24] 2025-04-20 08:01:04,897 | INFO     | -- intersect: -94558254321.44994
[2025-04-20 03:01:24] 2025-04-20 08:01:04,897 | INFO     | intersect: -94558254321.44994
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | chi2: 1.673891168188627
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | -- intersect: -94558254321.44994
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | current memory leak: 54.19 B/s (using 72 data points, chi2=1.67)
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | ..............................
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | . Timing measurements:
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | . get job = 0 s
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | . initial setup = 3 s
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | . payload setup = 4 s
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | . stage-in = 0 s
[2025-04-20 03:01:24] 2025-04-20 08:01:04,898 | INFO     | . payload execution = 4768 s
[2025-04-20 03:01:24] 2025-04-20 08:01:04,899 | INFO     | . stage-out = 0 s
[2025-04-20 03:01:24] 2025-04-20 08:01:04,899 | INFO     | . log creation = 0 s
[2025-04-20 03:01:24] 2025-04-20 08:01:04,899 | INFO     | ..............................
[2025-04-20 03:01:24] 2025-04-20 08:01:04,982 | INFO     | 
[2025-04-20 03:01:24] 2025-04-20 08:01:04,982 | INFO     | job summary report
[2025-04-20 03:01:24] 2025-04-20 08:01:04,982 | INFO     | --------------------------------------------------
[2025-04-20 03:01:24] 2025-04-20 08:01:04,982 | INFO     | PanDA job id: 6607788097
[2025-04-20 03:01:24] 2025-04-20 08:01:04,982 | INFO     | task id: 44075483
[2025-04-20 03:01:24] 2025-04-20 08:01:04,982 | INFO     | errors: (none)
[2025-04-20 03:01:24] 2025-04-20 08:01:04,982 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 03:01:24] 2025-04-20 08:01:04,982 | INFO     | pilot state: finished 
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | transexitcode: 0
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | exeerrorcode: 0
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | exeerrordiag: 
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | exitcode: 0
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | exitmsg: OK
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | cpuconsumptiontime: 31203 s
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | nevents: 400
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | neventsw: 0
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | pid: 240445
[2025-04-20 03:01:24] 2025-04-20 08:01:04,983 | INFO     | pgrp: 240445
[2025-04-20 03:01:24] 2025-04-20 08:01:04,984 | INFO     | corecount: 8
[2025-04-20 03:01:24] 2025-04-20 08:01:04,984 | INFO     | event service: False
[2025-04-20 03:01:24] 2025-04-20 08:01:04,984 | INFO     | sizes: {0: 2426824, 3: 2427030, 11: 2427058, 4776: 2453317, 4777: 2462258, 4779: 2462314, 4784: 2462612}
[2025-04-20 03:01:24] 2025-04-20 08:01:04,984 | INFO     | --------------------------------------------------
[2025-04-20 03:01:24] 2025-04-20 08:01:04,984 | INFO     | 
[2025-04-20 03:01:24] 2025-04-20 08:01:04,984 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-20 03:01:24] 2025-04-20 08:01:05,008 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,008 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,010 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 03:01:24] 2025-04-20 08:01:05,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,010 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 03:01:24] 2025-04-20 08:01:05,010 | INFO     | job 6607788097 has completed (purged errors)
[2025-04-20 03:01:24] 2025-04-20 08:01:05,010 | INFO     | overall cleanup function is called
[2025-04-20 03:01:24] 2025-04-20 08:01:05,058 | INFO     | PID=234005 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-20 03:01:24] 2025-04-20 08:01:06,018 | INFO     | --- collectZombieJob: --- 10, [240445]
[2025-04-20 03:01:24] 2025-04-20 08:01:06,019 | INFO     | zombie collector waiting for pid 240445
[2025-04-20 03:01:24] 2025-04-20 08:01:06,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 03:01:24] 2025-04-20 08:01:06,019 | INFO     | collected zombie processes
[2025-04-20 03:01:24] 2025-04-20 08:01:06,019 | INFO     | will attempt to kill all subprocesses of pid=240445
[2025-04-20 03:01:24] 2025-04-20 08:01:06,067 | INFO     | process IDs to be killed: [240445] (in reverse order)
[2025-04-20 03:01:24] 2025-04-20 08:01:06,107 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 03:01:24] 2025-04-20 08:01:06,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 03:01:24] 2025-04-20 08:01:06,109 | INFO     | did not find any defunct processes belonging to 240445
[2025-04-20 03:01:24] 2025-04-20 08:01:06,111 | INFO     | did not find any defunct processes belonging to 240445
[2025-04-20 03:01:24] 2025-04-20 08:01:06,111 | INFO     | ready for new job
[2025-04-20 03:01:24] 2025-04-20 08:01:06,111 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 03:01:24] 2025-04-20 08:01:06,112 | INFO     | **************************************
[2025-04-20 03:01:24] 2025-04-20 08:01:06,112 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 03:01:24] 2025-04-20 08:01:06,112 | INFO     | **************************************
[2025-04-20 03:01:24] 2025-04-20 08:01:06,112 | INFO     | 
[2025-04-20 03:01:24] 2025-04-20 08:01:06,113 | INFO     | pilot is running in a VM
[2025-04-20 03:01:24] 2025-04-20 08:01:06,113 | INFO     | architecture information:
[2025-04-20 03:01:24] 2025-04-20 08:01:06,113 | INFO     | executing command: cat /etc/os-release
[2025-04-20 03:01:24] 2025-04-20 08:01:06,126 | INFO     | cat /etc/os-release:
[2025-04-20 03:01:24] NAME="CentOS Linux"
[2025-04-20 03:01:24] VERSION="7 (Core)"
[2025-04-20 03:01:24] ID="centos"
[2025-04-20 03:01:24] ID_LIKE="rhel fedora"
[2025-04-20 03:01:24] VERSION_ID="7"
[2025-04-20 03:01:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 03:01:24] ANSI_COLOR="0;31"
[2025-04-20 03:01:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 03:01:24] HOME_URL="https://www.centos.org/"
[2025-04-20 03:01:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 03:01:24] 
[2025-04-20 03:01:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 03:01:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 03:01:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 03:01:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 03:01:24] 
[2025-04-20 03:01:24] 2025-04-20 08:01:06,127 | INFO     | **************************************
[2025-04-20 03:01:24] 2025-04-20 08:01:06,629 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-20 03:01:24] 2025-04-20 08:01:06,645 | INFO     | sufficient remaining disk space (111618818048 B)
[2025-04-20 03:01:24] 2025-04-20 08:01:06,645 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 03:01:24] 2025-04-20 08:01:06,645 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 03:01:24] 2025-04-20 08:01:06,645 | INFO     | update_server=False
[2025-04-20 03:01:24] 2025-04-20 08:01:06,645 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 03:01:24] 2025-04-20 08:01:06,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 03:01:24] 2025-04-20 08:01:06,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 03:01:24] 2025-04-20 08:01:06,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 03:01:24] 2025-04-20 08:01:06,924 | INFO     | all data control threads have been joined
[2025-04-20 03:01:24] 2025-04-20 08:01:07,063 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 03:01:24] 2025-04-20 08:01:07,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 03:01:24] 2025-04-20 08:01:07,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 03:01:24] 2025-04-20 08:01:07,547 | INFO     | all job control threads have been joined
[2025-04-20 03:01:24] 2025-04-20 08:01:07,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 03:01:24] 2025-04-20 08:01:07,609 | INFO     | aborting loop
[2025-04-20 03:01:24] 2025-04-20 08:01:07,651 | INFO     | [job] retrieve thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:07,651 | INFO     | [job] queue monitor thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:07,798 | INFO     | [payload] validate_post thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:07,849 | INFO     | all payload control threads have been joined
[2025-04-20 03:01:24] 2025-04-20 08:01:07,927 | INFO     | [data] control thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,176 | INFO     | [payload] failed_post thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,553 | INFO     | [job] control thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,578 | INFO     | [job] validate thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,614 | INFO     | [job] job monitor thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,624 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,651 | INFO     | [data] copytool_out thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,830 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,854 | INFO     | [payload] control thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:08,964 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:09,149 | INFO     | [data] copytool_in thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:10,652 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:16,770 | INFO     | job.realtimelogging is not enabled
[2025-04-20 03:01:24] 2025-04-20 08:01:17,776 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 03:01:24] 2025-04-20 08:01:18,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695714203456)>', '<ExcThread(monitor, started 139694935365376)>']
[2025-04-20 03:01:24] 2025-04-20 08:01:19,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 03:01:24] 2025-04-20 08:01:19,125 | INFO     | [monitor] control thread has ended
[2025-04-20 03:01:24] 2025-04-20 08:01:23,965 | INFO     | all workflow threads have been joined
[2025-04-20 03:01:24] 2025-04-20 08:01:23,965 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 03:01:24] 2025-04-20 08:01:23,965 | INFO     | traces error code: 0
[2025-04-20 03:01:24] 2025-04-20 08:01:23,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 03:01:24] 2025-04-20 08:01:24,043 [wrapper] ==== pilot stdout END ====
[2025-04-20 03:01:24] 2025-04-20 08:01:24,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 03:01:24] 2025-04-20 08:01:24,049 [wrapper] pilotpid: 234005
[2025-04-20 03:01:24] 2025-04-20 08:01:24,051 [wrapper] Pilot exit status: 0
[2025-04-20 03:01:24] 2025-04-20 08:01:24,062 [wrapper] pandaids: 6607788097
[2025-04-20 03:01:24] 2025-04-20 08:01:24,086 [wrapper] cleanup supervisor_pilot  251752 234006
[2025-04-20 03:01:24] 2025-04-20 08:01:24,089 [wrapper] Test setup, not cleaning
[2025-04-20 03:01:24] 2025-04-20 08:01:24,092 [wrapper] apfmon messages muted
[2025-04-20 03:01:24] 2025-04-20 08:01:24,095 [wrapper] ==== wrapper stdout END ====
[2025-04-20 03:01:24] 2025-04-20 08:01:24,097 [wrapper] ==== wrapper stderr END ====
[2025-04-20 03:01:24]  *** Error codes and diagnostics ***
[2025-04-20 03:01:24]     "exeErrorCode": 0,
[2025-04-20 03:01:24]     "exeErrorDiag": "",
[2025-04-20 03:01:24]     "pilotErrorCode": 0,
[2025-04-20 03:01:24]     "pilotErrorDiag": "",
[2025-04-20 03:01:24]  *** Listing of results directory ***
[2025-04-20 03:01:24] total 414920
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc    495897 Apr 19 06:58 pilot3.tar.gz
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc      5111 Apr 19 07:01 queuedata.json
[2025-04-20 03:01:24] -rwx------. 1 boinc boinc     37140 Apr 19 07:02 runpilot2-wrapper.sh
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc       100 Apr 20 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 03:01:24] -rwxr-xr-x. 1 boinc boinc      7986 Apr 20 01:40 run_atlas
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc       105 Apr 20 01:40 job.xml
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc      6386 Apr 20 01:40 init_data.xml
[2025-04-20 03:01:24] -rw-r--r--. 2 boinc boinc 221471619 Apr 20 01:40 EVNT.44075481._003197.pool.root.1
[2025-04-20 03:01:24] -rw-r--r--. 2 boinc boinc     17569 Apr 20 01:40 start_atlas.sh
[2025-04-20 03:01:24] drwxrwx--x. 2 boinc boinc        68 Apr 20 01:40 shared
[2025-04-20 03:01:24] -rw-r--r--. 2 boinc boinc    508892 Apr 20 01:40 input.tar.gz
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc         0 Apr 20 01:40 boinc_lockfile
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc      2579 Apr 20 01:40 pandaJob.out
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc       424 Apr 20 01:40 setup.sh.local
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc    991292 Apr 20 01:41 agis_schedconf.cvmfs.json
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc   1618536 Apr 20 01:41 agis_ddmendpoints.agis.ALL.json
[2025-04-20 03:01:24] drwx------. 4 boinc boinc      4096 Apr 20 01:41 pilot3
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc        95 Apr 20 03:00 pilot_heartbeat.json
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc 197999199 Apr 20 03:00 HITS.44075483._082482.pool.root.1
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc       529 Apr 20 03:00 boinc_task_state.xml
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc      1013 Apr 20 03:00 memory_monitor_summary.json
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc    309305 Apr 20 03:00 log.44075483._082482.job.log.tgz.1
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc      7679 Apr 20 03:01 heartbeat.json
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc      8192 Apr 20 03:01 boinc_mmap_file
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc        27 Apr 20 03:01 wrapper_checkpoint.txt
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc      4488 Apr 20 03:01 pilotlog.txt
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc    465446 Apr 20 03:01 log.44075483._082482.job.log.1
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc       357 Apr 20 03:01 output.list
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc       620 Apr 20 03:01 runtime_log
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc    798720 Apr 20 03:01 result.tar.gz
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc     10978 Apr 20 03:01 runtime_log.err
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc       642 Apr 20 03:01 L0tKDmK5LQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmmqhLDm1etnln.diag
[2025-04-20 03:01:24] -rw-r--r--. 1 boinc boinc     21111 Apr 20 03:01 stderr.txt
[2025-04-20 03:01:24] HITS file was successfully produced:
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc 197999199 Apr 20 03:00 shared/HITS.pool.root.1
[2025-04-20 03:01:24]  *** Contents of shared directory: ***
[2025-04-20 03:01:24] total 410944
[2025-04-20 03:01:24] -rw-r--r--. 2 boinc boinc 221471619 Apr 20 01:40 ATLAS.root_0
[2025-04-20 03:01:24] -rw-r--r--. 2 boinc boinc     17569 Apr 20 01:40 start_atlas.sh
[2025-04-20 03:01:24] -rw-r--r--. 2 boinc boinc    508892 Apr 20 01:40 input.tar.gz
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc 197999199 Apr 20 03:00 HITS.pool.root.1
[2025-04-20 03:01:24] -rw-------. 1 boinc boinc    798720 Apr 20 03:01 result.tar.gz
03:01:25 (230339): run_atlas exited; CPU time 31218.047250
03:01:25 (230339): called boinc_finish(0)

</stderr_txt>
]]>

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