Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:44:25 (27172): wrapper (7.7.26015): starting
10:44:25 (27172): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 10:44:25] Arguments: --nthreads 8
[2025-04-19 10:44:25] Threads: 8
[2025-04-19 10:44:25] Checking for CVMFS
[2025-04-19 10:44:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:44:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:44:25] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:44:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:44:26] 2.11.2.0 1634 42220 200040 145041 3 323 18043850 18432001 13925 130560 0 158772405 98.751 436080721 55147 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 10:44:26] CVMFS is ok
[2025-04-19 10:44:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 10:44:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 10:44:26] Further information can be found at the LHC@home message board.
[2025-04-19 10:44:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:44:26] Checking for apptainer binary...
[2025-04-19 10:44:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:44:26] Running /usr/bin/apptainer --version
[2025-04-19 10:44:26] apptainer version 1.3.2-1.el7
[2025-04-19 10:44:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:44:28] c-210-41.aglt2.org
[2025-04-19 10:44:28] apptainer works
[2025-04-19 10:44:28] Set ATHENA_PROC_NUMBER=8
[2025-04-19 10:44:28] Set ATHENA_CORE_NUMBER=8
[2025-04-19 10:44:28] Starting ATLAS job with PandaID=6607713997
[2025-04-19 10:44:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 15:51:04]  *** The last 200 lines of the pilot log: ***
[2025-04-19 15:51:04] 2025-04-19 19:50:49,262 | INFO     | sum of deviations: 172104684815.78714
[2025-04-19 15:51:04] 2025-04-19 19:50:49,262 | INFO     | mean x: 1745083069.3322258
[2025-04-19 15:51:04] 2025-04-19 19:50:49,262 | INFO     | mean y: 2408740.3621262456
[2025-04-19 15:51:04] 2025-04-19 19:50:49,262 | INFO     | -- intersect: -35513995944.02105
[2025-04-19 15:51:04] 2025-04-19 19:50:49,262 | INFO     | intersect: -35513995944.02105
[2025-04-19 15:51:04] 2025-04-19 19:50:49,263 | INFO     | chi2: 6.261894003622377
[2025-04-19 15:51:04] 2025-04-19 19:50:49,263 | INFO     | sum of square deviations: 8041874220.216216
[2025-04-19 15:51:04] 2025-04-19 19:50:49,265 | INFO     | sum of deviations: 189293685502.05392
[2025-04-19 15:51:04] 2025-04-19 19:50:49,265 | INFO     | mean x: 1745082916.837838
[2025-04-19 15:51:04] 2025-04-19 19:50:49,265 | INFO     | mean y: 2414963.5844594594
[2025-04-19 15:51:04] 2025-04-19 19:50:49,265 | INFO     | -- intersect: -41074225604.169556
[2025-04-19 15:51:04] 2025-04-19 19:50:49,266 | INFO     | intersect: -41074225604.169556
[2025-04-19 15:51:04] 2025-04-19 19:50:49,266 | INFO     | chi2: 5.454449950326322
[2025-04-19 15:51:04] 2025-04-19 19:50:49,266 | INFO     | current chi2=5.454449950326322 (change=12.894565970439059 %)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,266 | INFO     | right removable region: 295
[2025-04-19 15:51:04] 2025-04-19 19:50:49,266 | INFO     | sum of square deviations: 8041813220.216218
[2025-04-19 15:51:04] 2025-04-19 19:50:49,268 | INFO     | sum of deviations: 91406594656.56769
[2025-04-19 15:51:04] 2025-04-19 19:50:49,269 | INFO     | mean x: 1745083221.837838
[2025-04-19 15:51:04] 2025-04-19 19:50:49,269 | INFO     | mean y: 2438388.0743243243
[2025-04-19 15:51:04] 2025-04-19 19:50:49,269 | INFO     | -- intersect: -19832903509.635117
[2025-04-19 15:51:04] 2025-04-19 19:50:49,269 | INFO     | intersect: -19832903509.635117
[2025-04-19 15:51:04] 2025-04-19 19:50:49,269 | INFO     | chi2: 3.3311454962156217
[2025-04-19 15:51:04] 2025-04-19 19:50:49,269 | INFO     | current chi2=3.3311454962156217 (change=46.802908284799734 %)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,269 | INFO     | sum of square deviations: 7641105439.635734
[2025-04-19 15:51:04] 2025-04-19 19:50:49,271 | INFO     | sum of deviations: 27151968517.316162
[2025-04-19 15:51:04] 2025-04-19 19:50:49,272 | INFO     | mean x: 1745083374.3436427
[2025-04-19 15:51:04] 2025-04-19 19:50:49,272 | INFO     | mean y: 2462844.116838488
[2025-04-19 15:51:04] 2025-04-19 19:50:49,272 | INFO     | -- intersect: -6198531137.001325
[2025-04-19 15:51:04] 2025-04-19 19:50:49,272 | INFO     | intersect: -6198531137.001325
[2025-04-19 15:51:04] 2025-04-19 19:50:49,272 | INFO     | chi2: 1.6021013652228828
[2025-04-19 15:51:04] 2025-04-19 19:50:49,272 | INFO     | current chi2=1.6021013652228828 (change=51.90539209281118 %)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,272 | INFO     | sum of square deviations: 7253932796.534948
[2025-04-19 15:51:04] 2025-04-19 19:50:49,274 | INFO     | sum of deviations: -8865890830.02098
[2025-04-19 15:51:04] 2025-04-19 19:50:49,274 | INFO     | mean x: 1745083526.8496504
[2025-04-19 15:51:04] 2025-04-19 19:50:49,274 | INFO     | mean y: 2476953.79020979
[2025-04-19 15:51:04] 2025-04-19 19:50:49,275 | INFO     | -- intersect: 2135350316.7344465
[2025-04-19 15:51:04] 2025-04-19 19:50:49,275 | INFO     | intersect: 2135350316.7344465
[2025-04-19 15:51:04] 2025-04-19 19:50:49,275 | INFO     | chi2: 0.8667946135454321
[2025-04-19 15:51:04] 2025-04-19 19:50:49,275 | INFO     | current chi2=0.8667946135454321 (change=45.89639380122216 %)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,275 | INFO     | sum of square deviations: 6880062728.412774
[2025-04-19 15:51:04] 2025-04-19 19:50:49,277 | INFO     | sum of deviations: -12936461217.213528
[2025-04-19 15:51:04] 2025-04-19 19:50:49,277 | INFO     | mean x: 1745083679.355872
[2025-04-19 15:51:04] 2025-04-19 19:50:49,277 | INFO     | mean y: 2478598.4021352315
[2025-04-19 15:51:04] 2025-04-19 19:50:49,277 | INFO     | -- intersect: 3283728818.047678
[2025-04-19 15:51:04] 2025-04-19 19:50:49,277 | INFO     | intersect: 3283728818.047678
[2025-04-19 15:51:04] 2025-04-19 19:50:49,278 | INFO     | chi2: 0.8493822211345573
[2025-04-19 15:51:04] 2025-04-19 19:50:49,278 | INFO     | current chi2=0.8493822211345573 (change=2.008825636289228 %)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,278 | INFO     | left removable region: 40
[2025-04-19 15:51:04] 2025-04-19 19:50:49,278 | INFO     | sum of square deviations: 5141504284.101963
[2025-04-19 15:51:04] 2025-04-19 19:50:49,280 | INFO     | sum of deviations: 4893867889.094129
[2025-04-19 15:51:04] 2025-04-19 19:50:49,280 | INFO     | mean x: 1745084106.380392
[2025-04-19 15:51:04] 2025-04-19 19:50:49,280 | INFO     | mean y: 2487032.6588235293
[2025-04-19 15:51:04] 2025-04-19 19:50:49,280 | INFO     | -- intersect: -1658546509.2932265
[2025-04-19 15:51:04] 2025-04-19 19:50:49,280 | INFO     | intersect: -1658546509.2932265
[2025-04-19 15:51:04] 2025-04-19 19:50:49,280 | INFO     | chi2: 0.00012933101481406293
[2025-04-19 15:51:04] 2025-04-19 19:50:49,280 | INFO     | -- intersect: -1658546509.2932265
[2025-04-19 15:51:04] 2025-04-19 19:50:49,280 | INFO     | current memory leak: 0.95 B/s (using 255 data points, chi2=0.00)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,281 | INFO     | ..............................
[2025-04-19 15:51:04] 2025-04-19 19:50:49,281 | INFO     | . Timing measurements:
[2025-04-19 15:51:04] 2025-04-19 19:50:49,281 | INFO     | . get job = 0 s
[2025-04-19 15:51:04] 2025-04-19 19:50:49,281 | INFO     | . initial setup = 2 s
[2025-04-19 15:51:04] 2025-04-19 19:50:49,281 | INFO     | . payload setup = 7 s
[2025-04-19 15:51:04] 2025-04-19 19:50:49,282 | INFO     | . stage-in = 0 s
[2025-04-19 15:51:04] 2025-04-19 19:50:49,282 | INFO     | . payload execution = 18326 s
[2025-04-19 15:51:04] 2025-04-19 19:50:49,282 | INFO     | . stage-out = 1 s
[2025-04-19 15:51:04] 2025-04-19 19:50:49,282 | INFO     | . log creation = 0 s
[2025-04-19 15:51:04] 2025-04-19 19:50:49,282 | INFO     | ..............................
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | 
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | job summary report
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | --------------------------------------------------
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | PanDA job id: 6607713997
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | task id: 44075483
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | errors: (none)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | pilot state: finished 
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | transexitcode: 0
[2025-04-19 15:51:04] 2025-04-19 19:50:49,363 | INFO     | exeerrorcode: 0
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | exeerrordiag: 
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | exitcode: 0
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | exitmsg: OK
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | cpuconsumptiontime: 37201 s
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | nevents: 400
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | neventsw: 0
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | pid: 64903
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | pgrp: 64903
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | corecount: 8
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | event service: False
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | sizes: {0: 2426823, 6: 2427029, 11: 2427057, 18336: 2459519, 18338: 2468460, 18342: 2468516, 18347: 2468814}
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | --------------------------------------------------
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | 
[2025-04-19 15:51:04] 2025-04-19 19:50:49,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | job 6607713997 has completed (purged errors)
[2025-04-19 15:51:04] 2025-04-19 19:50:49,401 | INFO     | overall cleanup function is called
[2025-04-19 15:51:04] 2025-04-19 19:50:50,409 | INFO     | --- collectZombieJob: --- 10, [64903]
[2025-04-19 15:51:04] 2025-04-19 19:50:50,409 | INFO     | zombie collector waiting for pid 64903
[2025-04-19 15:51:04] 2025-04-19 19:50:50,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 15:51:04] 2025-04-19 19:50:50,410 | INFO     | collected zombie processes
[2025-04-19 15:51:04] 2025-04-19 19:50:50,410 | INFO     | will attempt to kill all subprocesses of pid=64903
[2025-04-19 15:51:04] 2025-04-19 19:50:50,647 | INFO     | process IDs to be killed: [64903] (in reverse order)
[2025-04-19 15:51:04] 2025-04-19 19:50:50,729 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 15:51:04] 2025-04-19 19:50:50,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 15:51:04] 2025-04-19 19:50:50,738 | INFO     | did not find any defunct processes belonging to 64903
[2025-04-19 15:51:04] 2025-04-19 19:50:50,745 | INFO     | did not find any defunct processes belonging to 64903
[2025-04-19 15:51:04] 2025-04-19 19:50:50,745 | INFO     | ready for new job
[2025-04-19 15:51:04] 2025-04-19 19:50:50,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 15:51:04] 2025-04-19 19:50:50,747 | INFO     | **************************************
[2025-04-19 15:51:04] 2025-04-19 19:50:50,747 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 15:51:04] 2025-04-19 19:50:50,747 | INFO     | **************************************
[2025-04-19 15:51:04] 2025-04-19 19:50:50,747 | INFO     | 
[2025-04-19 15:51:04] 2025-04-19 19:50:50,750 | INFO     | architecture information:
[2025-04-19 15:51:04] 2025-04-19 19:50:50,751 | INFO     | executing command: cat /etc/os-release
[2025-04-19 15:51:04] 2025-04-19 19:50:50,766 | INFO     | cat /etc/os-release:
[2025-04-19 15:51:04] NAME="CentOS Linux"
[2025-04-19 15:51:04] VERSION="7 (Core)"
[2025-04-19 15:51:04] ID="centos"
[2025-04-19 15:51:04] ID_LIKE="rhel fedora"
[2025-04-19 15:51:04] VERSION_ID="7"
[2025-04-19 15:51:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 15:51:04] ANSI_COLOR="0;31"
[2025-04-19 15:51:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 15:51:04] HOME_URL="https://www.centos.org/"
[2025-04-19 15:51:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 15:51:04] 
[2025-04-19 15:51:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 15:51:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 15:51:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 15:51:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 15:51:04] 
[2025-04-19 15:51:04] 2025-04-19 19:50:50,766 | INFO     | **************************************
[2025-04-19 15:51:04] 2025-04-19 19:50:51,268 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-19 15:51:04] 2025-04-19 19:50:51,279 | INFO     | sufficient remaining disk space (74136420352 B)
[2025-04-19 15:51:04] 2025-04-19 19:50:51,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 15:51:04] 2025-04-19 19:50:51,279 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 15:51:04] 2025-04-19 19:50:51,279 | INFO     | update_server=False
[2025-04-19 15:51:04] 2025-04-19 19:50:51,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 15:51:04] 2025-04-19 19:50:51,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 15:51:04] 2025-04-19 19:50:51,280 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 15:51:04] 2025-04-19 19:50:51,280 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 15:51:04] 2025-04-19 19:50:51,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 15:51:04] 2025-04-19 19:50:51,280 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 15:51:04] 2025-04-19 19:50:51,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 15:51:04] 2025-04-19 19:50:51,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 15:51:04] 2025-04-19 19:50:51,774 | INFO     | aborting loop
[2025-04-19 15:51:04] 2025-04-19 19:50:52,247 | INFO     | all data control threads have been joined
[2025-04-19 15:51:04] 2025-04-19 19:50:52,284 | INFO     | [job] retrieve thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:52,290 | INFO     | [job] queue monitor thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:52,349 | INFO     | all payload control threads have been joined
[2025-04-19 15:51:04] 2025-04-19 19:50:52,536 | INFO     | all job control threads have been joined
[2025-04-19 15:51:04] 2025-04-19 19:50:52,629 | INFO     | [data] copytool_in thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:52,653 | INFO     | [payload] validate_post thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:52,779 | INFO     | [job] job monitor thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:52,861 | INFO     | [payload] failed_post thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,032 | INFO     | [job] validate thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,219 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,253 | INFO     | [data] control thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,334 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,354 | INFO     | [payload] control thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,358 | INFO     | [data] copytool_out thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,406 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,495 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:53,541 | INFO     | [job] control thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:54,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 15:51:04] 2025-04-19 19:50:58,525 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 15:51:04] 2025-04-19 19:50:59,477 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236781840192)>', '<ExcThread(monitor, started 140235975419648)>']
[2025-04-19 15:51:04] 2025-04-19 19:51:00,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 15:51:04] 2025-04-19 19:51:00,329 | INFO     | [monitor] control thread has ended
[2025-04-19 15:51:04] 2025-04-19 19:51:04,503 | INFO     | all workflow threads have been joined
[2025-04-19 15:51:04] 2025-04-19 19:51:04,503 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 15:51:04] 2025-04-19 19:51:04,503 | INFO     | traces error code: 0
[2025-04-19 15:51:04] 2025-04-19 19:51:04,503 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 15:51:04] 2025-04-19 19:51:04,618 [wrapper] ==== pilot stdout END ====
[2025-04-19 15:51:04] 2025-04-19 19:51:04,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 15:51:04] 2025-04-19 19:51:04,622 [wrapper] pilotpid: 43610
[2025-04-19 15:51:04] 2025-04-19 19:51:04,625 [wrapper] Pilot exit status: 0
[2025-04-19 15:51:04] 2025-04-19 19:51:04,639 [wrapper] pandaids: 6607713997
[2025-04-19 15:51:04] 2025-04-19 19:51:04,699 [wrapper] cleanup supervisor_pilot  5491 43612
[2025-04-19 15:51:04] 2025-04-19 19:51:04,706 [wrapper] Test setup, not cleaning
[2025-04-19 15:51:04] 2025-04-19 19:51:04,711 [wrapper] apfmon messages muted
[2025-04-19 15:51:04] 2025-04-19 19:51:04,717 [wrapper] ==== wrapper stdout END ====
[2025-04-19 15:51:04] 2025-04-19 19:51:04,723 [wrapper] ==== wrapper stderr END ====
[2025-04-19 15:51:04]  *** Error codes and diagnostics ***
[2025-04-19 15:51:04]     "exeErrorCode": 0,
[2025-04-19 15:51:04]     "exeErrorDiag": "",
[2025-04-19 15:51:04]     "pilotErrorCode": 0,
[2025-04-19 15:51:04]     "pilotErrorDiag": "",
[2025-04-19 15:51:04]  *** Listing of results directory ***
[2025-04-19 15:51:04] total 420024
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 07:19 pilot3.tar.gz
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 07:39 queuedata.json
[2025-04-19 15:51:04] -rwx------ 1 boincer umatlas     37140 Apr 19 07:39 runpilot2-wrapper.sh
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas       100 Apr 19 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 15:51:04] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 10:44 run_atlas
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas       105 Apr 19 10:44 job.xml
[2025-04-19 15:51:04] -rw-r--r-- 2 boincer umatlas 221647807 Apr 19 10:44 EVNT.44075481._003189.pool.root.1
[2025-04-19 15:51:04] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 10:44 start_atlas.sh
[2025-04-19 15:51:04] drwxrwx--x 2 boincer umatlas      4096 Apr 19 10:44 shared
[2025-04-19 15:51:04] -rw-r--r-- 2 boincer umatlas    508891 Apr 19 10:44 input.tar.gz
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas         0 Apr 19 10:44 boinc_lockfile
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 10:44 pandaJob.out
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas       424 Apr 19 10:44 setup.sh.local
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas    991300 Apr 19 10:44 agis_schedconf.cvmfs.json
[2025-04-19 15:51:04] drwx------ 4 boincer umatlas      4096 Apr 19 10:44 pilot3
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas      6254 Apr 19 15:49 init_data.xml
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas 200613928 Apr 19 15:50 HITS.44075483._082253.pool.root.1
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas       531 Apr 19 15:50 boinc_task_state.xml
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas        95 Apr 19 15:50 pilot_heartbeat.json
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas      1079 Apr 19 15:50 memory_monitor_summary.json
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas   1618536 Apr 19 15:50 agis_ddmendpoints.agis.ALL.json
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas    434151 Apr 19 15:50 log.44075483._082253.job.log.tgz.1
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas      7749 Apr 19 15:50 heartbeat.json
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas        28 Apr 19 15:50 wrapper_checkpoint.txt
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 15:50 boinc_mmap_file
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas      4476 Apr 19 15:51 pilotlog.txt
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas   1550921 Apr 19 15:51 log.44075483._082253.job.log.1
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas       357 Apr 19 15:51 output.list
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas       620 Apr 19 15:51 runtime_log
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas   2007040 Apr 19 15:51 result.tar.gz
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas     11014 Apr 19 15:51 runtime_log.err
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas       663 Apr 19 15:51 0WHLDmJjLQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm9U6KDmLDmvIo.diag
[2025-04-19 15:51:04] -rw-r--r-- 1 boincer umatlas     20812 Apr 19 15:51 stderr.txt
[2025-04-19 15:51:04] HITS file was successfully produced:
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas 200613928 Apr 19 15:50 shared/HITS.pool.root.1
[2025-04-19 15:51:04]  *** Contents of shared directory: ***
[2025-04-19 15:51:04] total 414860
[2025-04-19 15:51:04] -rw-r--r-- 2 boincer umatlas 221647807 Apr 19 10:44 ATLAS.root_0
[2025-04-19 15:51:04] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 10:44 start_atlas.sh
[2025-04-19 15:51:04] -rw-r--r-- 2 boincer umatlas    508891 Apr 19 10:44 input.tar.gz
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas 200613928 Apr 19 15:50 HITS.pool.root.1
[2025-04-19 15:51:04] -rw------- 1 boincer umatlas   2007040 Apr 19 15:51 result.tar.gz
15:51:06 (27172): run_atlas exited; CPU time 36622.233589
15:51:06 (27172): called boinc_finish(0)

</stderr_txt>
]]>

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