Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:57:19 (427244): wrapper (7.7.26015): starting
11:57:19 (427244): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 11:57:19] Arguments: --nthreads 9
[2025-04-19 11:57:19] Threads: 9
[2025-04-19 11:57:19] Checking for CVMFS
[2025-04-19 11:57:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 11:57:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 11:57:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 11:57:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 11:57:22] 2.12.6.0 1415667 77394 175120 145043 2 604 25911211 32935936 16318 130560 0 67888600 99.508 91364603 26377 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 11:57:22] CVMFS is ok
[2025-04-19 11:57:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 11:57:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 11:57:22] Further information can be found at the LHC@home message board.
[2025-04-19 11:57:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 11:57:22] Checking for apptainer binary...
[2025-04-19 11:57:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 11:57:22] Running /usr/bin/apptainer --version
[2025-04-19 11:57:22] apptainer version 1.4.0-1.el9
[2025-04-19 11:57:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 11:57:23] c6-6-39-1.aglt2.org
[2025-04-19 11:57:23] apptainer works
[2025-04-19 11:57:23] Set ATHENA_PROC_NUMBER=9
[2025-04-19 11:57:23] Set ATHENA_CORE_NUMBER=9
[2025-04-19 11:57:23] Starting ATLAS job with PandaID=6607510266
[2025-04-19 11:57:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 15:49:06]  *** The last 200 lines of the pilot log: ***
[2025-04-19 15:49:06] 2025-04-19 19:48:46,839 | INFO     | mean x: 1745085107.3150685
[2025-04-19 15:49:06] 2025-04-19 19:48:46,839 | INFO     | mean y: 2289566.4109589043
[2025-04-19 15:49:06] 2025-04-19 19:48:46,839 | INFO     | -- intersect: -75174651733.00368
[2025-04-19 15:49:06] 2025-04-19 19:48:46,839 | INFO     | intersect: -75174651733.00368
[2025-04-19 15:49:06] 2025-04-19 19:48:46,839 | INFO     | chi2: 6.844163165419281
[2025-04-19 15:49:06] 2025-04-19 19:48:46,839 | INFO     | current chi2=6.844163165419281 (change=9.064820495195189 %)
[2025-04-19 15:49:06] 2025-04-19 19:48:46,839 | INFO     | right removable region: 218
[2025-04-19 15:49:06] 2025-04-19 19:48:46,840 | INFO     | sum of square deviations: 3257109273.981728
[2025-04-19 15:49:06] 2025-04-19 19:48:46,845 | INFO     | sum of deviations: 70151228247.3562
[2025-04-19 15:49:06] 2025-04-19 19:48:46,845 | INFO     | mean x: 1745085412.3242009
[2025-04-19 15:49:06] 2025-04-19 19:48:46,846 | INFO     | mean y: 2321703.178082192
[2025-04-19 15:49:06] 2025-04-19 19:48:46,846 | INFO     | -- intersect: -37583118260.103134
[2025-04-19 15:49:06] 2025-04-19 19:48:46,846 | INFO     | intersect: -37583118260.103134
[2025-04-19 15:49:06] 2025-04-19 19:48:46,846 | INFO     | chi2: 4.249009832286226
[2025-04-19 15:49:06] 2025-04-19 19:48:46,846 | INFO     | current chi2=4.249009832286226 (change=43.545403217610435 %)
[2025-04-19 15:49:06] 2025-04-19 19:48:46,847 | INFO     | sum of square deviations: 3039064925.943909
[2025-04-19 15:49:06] 2025-04-19 19:48:46,848 | INFO     | sum of deviations: 25963934683.457954
[2025-04-19 15:49:06] 2025-04-19 19:48:46,848 | INFO     | mean x: 1745085564.8317757
[2025-04-19 15:49:06] 2025-04-19 19:48:46,848 | INFO     | mean y: 2352608.8738317755
[2025-04-19 15:49:06] 2025-04-19 19:48:46,848 | INFO     | -- intersect: -14906604167.778399
[2025-04-19 15:49:06] 2025-04-19 19:48:46,848 | INFO     | intersect: -14906604167.778399
[2025-04-19 15:49:06] 2025-04-19 19:48:46,853 | INFO     | chi2: 2.527651329349697
[2025-04-19 15:49:06] 2025-04-19 19:48:46,853 | INFO     | current chi2=2.527651329349697 (change=40.51199151992391 %)
[2025-04-19 15:49:06] 2025-04-19 19:48:46,853 | INFO     | sum of square deviations: 2830987062.5550137
[2025-04-19 15:49:06] 2025-04-19 19:48:46,854 | INFO     | sum of deviations: -10848876657.521528
[2025-04-19 15:49:06] 2025-04-19 19:48:46,855 | INFO     | mean x: 1745085717.3349283
[2025-04-19 15:49:06] 2025-04-19 19:48:46,855 | INFO     | mean y: 2379506.5645933016
[2025-04-19 15:49:06] 2025-04-19 19:48:46,855 | INFO     | -- intersect: 6689877289.434173
[2025-04-19 15:49:06] 2025-04-19 19:48:46,855 | INFO     | intersect: 6689877289.434173
[2025-04-19 15:49:06] 2025-04-19 19:48:46,855 | INFO     | chi2: 1.230327418924213
[2025-04-19 15:49:06] 2025-04-19 19:48:46,855 | INFO     | current chi2=1.230327418924213 (change=51.32527162119522 %)
[2025-04-19 15:49:06] 2025-04-19 19:48:46,856 | INFO     | sum of square deviations: 2632617806.980399
[2025-04-19 15:49:06] 2025-04-19 19:48:46,861 | INFO     | sum of deviations: -30914753342.019608
[2025-04-19 15:49:06] 2025-04-19 19:48:46,861 | INFO     | mean x: 1745085869.8431373
[2025-04-19 15:49:06] 2025-04-19 19:48:46,861 | INFO     | mean y: 2394879.093137255
[2025-04-19 15:49:06] 2025-04-19 19:48:46,861 | INFO     | -- intersect: 20494886832.842953
[2025-04-19 15:49:06] 2025-04-19 19:48:46,861 | INFO     | intersect: 20494886832.842953
[2025-04-19 15:49:06] 2025-04-19 19:48:46,862 | INFO     | chi2: 0.8124175191177497
[2025-04-19 15:49:06] 2025-04-19 19:48:46,862 | INFO     | current chi2=0.8124175191177497 (change=33.967372699202286 %)
[2025-04-19 15:49:06] 2025-04-19 19:48:46,862 | INFO     | sum of square deviations: 2443737101.376889
[2025-04-19 15:49:06] 2025-04-19 19:48:46,864 | INFO     | sum of deviations: -35695200343.12561
[2025-04-19 15:49:06] 2025-04-19 19:48:46,864 | INFO     | mean x: 1745086022.3517587
[2025-04-19 15:49:06] 2025-04-19 19:48:46,864 | INFO     | mean y: 2398688.216080402
[2025-04-19 15:49:06] 2025-04-19 19:48:46,864 | INFO     | -- intersect: 25492536374.76882
[2025-04-19 15:49:06] 2025-04-19 19:48:46,864 | INFO     | intersect: 25492536374.76882
[2025-04-19 15:49:06] 2025-04-19 19:48:46,864 | INFO     | chi2: 0.7527764858083591
[2025-04-19 15:49:06] 2025-04-19 19:48:46,864 | INFO     | current chi2=0.7527764858083591 (change=7.341180108247569 %)
[2025-04-19 15:49:06] 2025-04-19 19:48:46,869 | INFO     | left removable region: 50
[2025-04-19 15:49:06] 2025-04-19 19:48:46,869 | INFO     | sum of square deviations: 1470345615.9940424
[2025-04-19 15:49:06] 2025-04-19 19:48:46,870 | INFO     | sum of deviations: -12471299021.333336
[2025-04-19 15:49:06] 2025-04-19 19:48:46,870 | INFO     | mean x: 1745086601.827381
[2025-04-19 15:49:06] 2025-04-19 19:48:46,870 | INFO     | mean y: 2400257.3333333335
[2025-04-19 15:49:06] 2025-04-19 19:48:46,871 | INFO     | -- intersect: 14804020089.278965
[2025-04-19 15:49:06] 2025-04-19 19:48:46,871 | INFO     | intersect: 14804020089.278965
[2025-04-19 15:49:06] 2025-04-19 19:48:46,871 | INFO     | chi2: 0.03769798339834297
[2025-04-19 15:49:06] 2025-04-19 19:48:46,871 | INFO     | -- intersect: 14804020089.278965
[2025-04-19 15:49:06] 2025-04-19 19:48:46,871 | INFO     | current memory leak: -8.48 B/s (using 168 data points, chi2=0.04)
[2025-04-19 15:49:06] 2025-04-19 19:48:46,872 | INFO     | ..............................
[2025-04-19 15:49:06] 2025-04-19 19:48:46,872 | INFO     | . Timing measurements:
[2025-04-19 15:49:06] 2025-04-19 19:48:46,872 | INFO     | . get job = 0 s
[2025-04-19 15:49:06] 2025-04-19 19:48:46,872 | INFO     | . initial setup = 4 s
[2025-04-19 15:49:06] 2025-04-19 19:48:46,872 | INFO     | . payload setup = 41 s
[2025-04-19 15:49:06] 2025-04-19 19:48:46,872 | INFO     | . stage-in = 0 s
[2025-04-19 15:49:06] 2025-04-19 19:48:46,872 | INFO     | . payload execution = 13665 s
[2025-04-19 15:49:06] 2025-04-19 19:48:46,872 | INFO     | . stage-out = 8 s
[2025-04-19 15:49:06] 2025-04-19 19:48:46,877 | INFO     | . log creation = 1 s
[2025-04-19 15:49:06] 2025-04-19 19:48:46,877 | INFO     | ..............................
[2025-04-19 15:49:06] 2025-04-19 19:48:47,410 | INFO     | 
[2025-04-19 15:49:06] 2025-04-19 19:48:47,410 | INFO     | job summary report
[2025-04-19 15:49:06] 2025-04-19 19:48:47,410 | INFO     | --------------------------------------------------
[2025-04-19 15:49:06] 2025-04-19 19:48:47,410 | INFO     | PanDA job id: 6607510266
[2025-04-19 15:49:06] 2025-04-19 19:48:47,410 | INFO     | task id: 44075483
[2025-04-19 15:49:06] 2025-04-19 19:48:47,410 | INFO     | errors: (none)
[2025-04-19 15:49:06] 2025-04-19 19:48:47,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 15:49:06] 2025-04-19 19:48:47,410 | INFO     | pilot state: finished 
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | transexitcode: 0
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | exeerrorcode: 0
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | exeerrordiag: 
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | exitcode: 0
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | exitmsg: OK
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | cpuconsumptiontime: 40628 s
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | nevents: 400
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | neventsw: 0
[2025-04-19 15:49:06] 2025-04-19 19:48:47,415 | INFO     | pid: 449140
[2025-04-19 15:49:06] 2025-04-19 19:48:47,416 | INFO     | pgrp: 449140
[2025-04-19 15:49:06] 2025-04-19 19:48:47,416 | INFO     | corecount: 9
[2025-04-19 15:49:06] 2025-04-19 19:48:47,416 | INFO     | event service: False
[2025-04-19 15:49:06] 2025-04-19 19:48:47,416 | INFO     | sizes: {0: 2426650, 1: 2426849, 2: 2426877, 13: 2426877, 24: 2426933, 35: 2427323, 46: 2427323, 13711: 2457329, 13719: 2466270, 13722: 2466326, 13740: 2466496}
[2025-04-19 15:49:06] 2025-04-19 19:48:47,416 | INFO     | --------------------------------------------------
[2025-04-19 15:49:06] 2025-04-19 19:48:47,416 | INFO     | 
[2025-04-19 15:49:06] 2025-04-19 19:48:47,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 15:49:06] 2025-04-19 19:48:47,529 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 15:49:06] 2025-04-19 19:48:47,532 | INFO     | job 6607510266 has completed (purged errors)
[2025-04-19 15:49:06] 2025-04-19 19:48:47,532 | INFO     | overall cleanup function is called
[2025-04-19 15:49:06] 2025-04-19 19:48:48,601 | INFO     | --- collectZombieJob: --- 10, [449140]
[2025-04-19 15:49:06] 2025-04-19 19:48:48,601 | INFO     | zombie collector waiting for pid 449140
[2025-04-19 15:49:06] 2025-04-19 19:48:48,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 15:49:06] 2025-04-19 19:48:48,601 | INFO     | collected zombie processes
[2025-04-19 15:49:06] 2025-04-19 19:48:48,615 | INFO     | will attempt to kill all subprocesses of pid=449140
[2025-04-19 15:49:06] 2025-04-19 19:48:49,639 | INFO     | process IDs to be killed: [449140] (in reverse order)
[2025-04-19 15:49:06] 2025-04-19 19:48:49,867 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 15:49:06] 2025-04-19 19:48:49,868 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 15:49:06] 2025-04-19 19:48:49,881 | INFO     | did not find any defunct processes belonging to 449140
[2025-04-19 15:49:06] 2025-04-19 19:48:49,894 | INFO     | did not find any defunct processes belonging to 449140
[2025-04-19 15:49:06] 2025-04-19 19:48:49,896 | INFO     | ready for new job
[2025-04-19 15:49:06] 2025-04-19 19:48:49,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 15:49:06] 2025-04-19 19:48:49,899 | INFO     | **************************************
[2025-04-19 15:49:06] 2025-04-19 19:48:49,899 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 15:49:06] 2025-04-19 19:48:49,938 | INFO     | **************************************
[2025-04-19 15:49:06] 2025-04-19 19:48:49,938 | INFO     | 
[2025-04-19 15:49:06] 2025-04-19 19:48:49,973 | INFO     | architecture information:
[2025-04-19 15:49:06] 2025-04-19 19:48:49,993 | INFO     | executing command: cat /etc/os-release
[2025-04-19 15:49:06] 2025-04-19 19:48:50,160 | INFO     | cat /etc/os-release:
[2025-04-19 15:49:06] NAME="CentOS Linux"
[2025-04-19 15:49:06] VERSION="7 (Core)"
[2025-04-19 15:49:06] ID="centos"
[2025-04-19 15:49:06] ID_LIKE="rhel fedora"
[2025-04-19 15:49:06] VERSION_ID="7"
[2025-04-19 15:49:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 15:49:06] ANSI_COLOR="0;31"
[2025-04-19 15:49:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 15:49:06] HOME_URL="https://www.centos.org/"
[2025-04-19 15:49:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 15:49:06] 
[2025-04-19 15:49:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 15:49:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 15:49:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 15:49:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 15:49:06] 
[2025-04-19 15:49:06] 2025-04-19 19:48:50,160 | INFO     | **************************************
[2025-04-19 15:49:06] 2025-04-19 19:48:50,664 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 15:49:06] 2025-04-19 19:48:50,801 | INFO     | sufficient remaining disk space (68050485248 B)
[2025-04-19 15:49:06] 2025-04-19 19:48:50,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 15:49:06] 2025-04-19 19:48:50,802 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 15:49:06] 2025-04-19 19:48:50,802 | INFO     | update_server=False
[2025-04-19 15:49:06] 2025-04-19 19:48:50,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 15:49:06] 2025-04-19 19:48:50,802 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 15:49:06] 2025-04-19 19:48:50,803 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 15:49:06] 2025-04-19 19:48:50,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 15:49:06] 2025-04-19 19:48:50,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 15:49:06] 2025-04-19 19:48:51,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 15:49:06] 2025-04-19 19:48:51,637 | INFO     | aborting loop
[2025-04-19 15:49:06] 2025-04-19 19:48:51,703 | INFO     | all data control threads have been joined
[2025-04-19 15:49:06] 2025-04-19 19:48:51,821 | INFO     | [job] retrieve thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:51,930 | INFO     | all payload control threads have been joined
[2025-04-19 15:49:06] 2025-04-19 19:48:52,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 15:49:06] 2025-04-19 19:48:52,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 15:49:06] 2025-04-19 19:48:52,252 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,447 | INFO     | [data] copytool_in thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,464 | INFO     | [payload] validate_post thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,485 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,489 | INFO     | all job control threads have been joined
[2025-04-19 15:49:06] 2025-04-19 19:48:52,643 | INFO     | [job] job monitor thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,648 | INFO     | [job] validate thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,703 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,709 | INFO     | [data] control thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,771 | INFO     | [payload] failed_post thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:52,936 | INFO     | [payload] control thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:53,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 15:49:06] 2025-04-19 19:48:53,156 | INFO     | [job] queue monitor thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:53,495 | INFO     | [job] control thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:54,244 | INFO     | [data] copytool_out thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:57,044 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 15:49:06] 2025-04-19 19:48:58,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747675436864)>', '<ExcThread(monitor, started 139746785339136)>']
[2025-04-19 15:49:06] 2025-04-19 19:48:58,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 15:49:06] 2025-04-19 19:48:58,881 | INFO     | [monitor] control thread has ended
[2025-04-19 15:49:06] 2025-04-19 19:49:03,901 | INFO     | all workflow threads have been joined
[2025-04-19 15:49:06] 2025-04-19 19:49:03,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 15:49:06] 2025-04-19 19:49:03,902 | INFO     | traces error code: 0
[2025-04-19 15:49:06] 2025-04-19 19:49:03,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 15:49:06] 2025-04-19 19:49:05,644 [wrapper] ==== pilot stdout END ====
[2025-04-19 15:49:06] 2025-04-19 19:49:05,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 15:49:06] 2025-04-19 19:49:05,683 [wrapper] pilotpid: 433773
[2025-04-19 15:49:06] 2025-04-19 19:49:05,701 [wrapper] Pilot exit status: 0
[2025-04-19 15:49:06] 2025-04-19 19:49:05,754 [wrapper] pandaids: 6607510266
[2025-04-19 15:49:06] 2025-04-19 19:49:05,877 [wrapper] cleanup supervisor_pilot 1715697 433774
[2025-04-19 15:49:06] 2025-04-19 19:49:05,885 [wrapper] Test setup, not cleaning
[2025-04-19 15:49:06] 2025-04-19 19:49:05,897 [wrapper] apfmon messages muted
[2025-04-19 15:49:06] 2025-04-19 19:49:05,946 [wrapper] ==== wrapper stdout END ====
[2025-04-19 15:49:06] 2025-04-19 19:49:06,002 [wrapper] ==== wrapper stderr END ====
[2025-04-19 15:49:06]  *** Error codes and diagnostics ***
[2025-04-19 15:49:06]     "exeErrorCode": 0,
[2025-04-19 15:49:06]     "exeErrorDiag": "",
[2025-04-19 15:49:06]     "pilotErrorCode": 0,
[2025-04-19 15:49:06]     "pilotErrorDiag": "",
[2025-04-19 15:49:06]  *** Listing of results directory ***
[2025-04-19 15:49:06] total 408356
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 03:03 queuedata.json
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 03:04 pilot3.tar.gz
[2025-04-19 15:49:06] -rwx------. 1 boincer umatlas     37140 Apr 19 03:05 runpilot2-wrapper.sh
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas       100 Apr 19 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 15:49:06] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 11:57 run_atlas
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas       105 Apr 19 11:57 job.xml
[2025-04-19 15:49:06] -rw-r--r--. 2 boincer umatlas 222813357 Apr 19 11:57 EVNT.44075481._003074.pool.root.1
[2025-04-19 15:49:06] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 11:57 start_atlas.sh
[2025-04-19 15:49:06] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 11:57 shared
[2025-04-19 15:49:06] -rw-r--r--. 2 boincer umatlas    508889 Apr 19 11:57 input.tar.gz
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas         0 Apr 19 11:57 boinc_lockfile
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas      2577 Apr 19 11:57 pandaJob.out
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas       467 Apr 19 11:57 setup.sh.local
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas    991300 Apr 19 11:58 agis_schedconf.cvmfs.json
[2025-04-19 15:49:06] drwx------. 4 boincer umatlas      4096 Apr 19 11:58 pilot3
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas      6840 Apr 19 15:45 init_data.xml
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas 188347742 Apr 19 15:46 HITS.44075483._079235.pool.root.1
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas       531 Apr 19 15:47 boinc_task_state.xml
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas      1050 Apr 19 15:48 memory_monitor_summary.json
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas   1618536 Apr 19 15:48 agis_ddmendpoints.agis.ALL.json
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas    392513 Apr 19 15:48 log.44075483._079235.job.log.tgz.1
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas        95 Apr 19 15:48 pilot_heartbeat.json
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas      7735 Apr 19 15:48 heartbeat.json
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas      4476 Apr 19 15:49 pilotlog.txt
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 15:49 boinc_mmap_file
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas        28 Apr 19 15:49 wrapper_checkpoint.txt
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas   1171182 Apr 19 15:49 log.44075483._079235.job.log.1
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas       357 Apr 19 15:49 output.list
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas       620 Apr 19 15:49 runtime_log
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas   1587200 Apr 19 15:49 result.tar.gz
[2025-04-19 15:49:06] -rw-------. 1 boincer umatlas       660 Apr 19 15:49 T0jMDmFRHQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWGhLDmjRIXFo.diag
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas     11424 Apr 19 15:49 runtime_log.err
[2025-04-19 15:49:06] -rw-r--r--. 1 boincer umatlas     20899 Apr 19 15:49 stderr.txt
[2025-04-19 15:49:07] HITS file was successfully produced:
[2025-04-19 15:49:07] -rw-------. 1 boincer umatlas 188347742 Apr 19 15:46 shared/HITS.pool.root.1
[2025-04-19 15:49:07]  *** Contents of shared directory: ***
[2025-04-19 15:49:07] total 403604
[2025-04-19 15:49:07] -rw-r--r--. 2 boincer umatlas 222813357 Apr 19 11:57 ATLAS.root_0
[2025-04-19 15:49:07] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 11:57 start_atlas.sh
[2025-04-19 15:49:07] -rw-r--r--. 2 boincer umatlas    508889 Apr 19 11:57 input.tar.gz
[2025-04-19 15:49:07] -rw-------. 1 boincer umatlas 188347742 Apr 19 15:46 HITS.pool.root.1
[2025-04-19 15:49:07] -rw-------. 1 boincer umatlas   1587200 Apr 19 15:49 result.tar.gz
15:49:08 (427244): run_atlas exited; CPU time 41002.950382
15:49:08 (427244): called boinc_finish(0)

</stderr_txt>
]]>

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