Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:01:03 (2861060): wrapper (7.7.26015): starting
22:01:03 (2861060): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 22:01:03] Arguments: --nthreads 12
[2025-04-19 22:01:03] Threads: 12
[2025-04-19 22:01:03] Checking for CVMFS
[2025-04-19 22:01:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 22:01:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 22:01:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 22:01:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 22:01:03] 2.11.5.0 4278 3111 88852 145049 2 56 2766209 4097025 0 130560 0 3396947 99.994 783164 54697 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2025-04-19 22:01:03] CVMFS is ok
[2025-04-19 22:01:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 22:01:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 22:01:03] Further information can be found at the LHC@home message board.
[2025-04-19 22:01:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 22:01:03] Checking for apptainer binary...
[2025-04-19 22:01:03] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-04-19 22:01:03] apptainer is not installed, using version from CVMFS
[2025-04-19 22:01:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 22:01:03] pckelar2.cern.ch
[2025-04-19 22:01:03] apptainer works
[2025-04-19 22:01:03] Set ATHENA_PROC_NUMBER=12
[2025-04-19 22:01:03] Set ATHENA_CORE_NUMBER=12
[2025-04-19 22:01:03] Starting ATLAS job with PandaID=6607713828
[2025-04-19 22:01:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 23:10:29]  *** The last 200 lines of the pilot log: ***
[2025-04-19 23:10:29]  guid=c0586dac-4ce1-47c0-98db-e69b4b3b54af
[2025-04-19 23:10:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 23:10:29]  is_altstaged=None
[2025-04-19 23:10:29]  is_tar=False
[2025-04-19 23:10:29]  lfn=log.44075483._082084.job.log.tgz.1
[2025-04-19 23:10:29]  mtime=0
[2025-04-19 23:10:29]  protocol_id=None
[2025-04-19 23:10:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 23:10:29]  replicas=None
[2025-04-19 23:10:29]  scope=mc23_13p6TeV
[2025-04-19 23:10:29]  status=None
[2025-04-19 23:10:29]  status_code=0
[2025-04-19 23:10:29]  storage_token=
[2025-04-19 23:10:29]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6607713828/log.44075483._082084.job.log.tgz.1
[2025-04-19 23:10:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/63/log.44075483._082084.job.log.tgz.1
[2025-04-19 23:10:29]  workdir=None
[2025-04-19 23:10:29] ]
[2025-04-19 23:10:29] 2025-04-19 21:10:06,199 | INFO     | transferring file log.44075483._082084.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6607713828/log.44075483._082084.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-19 23:10:29] 2025-04-19 21:10:06,199 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6607713828/log.44075483._082084.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._082084.job
[2025-04-19 23:10:29] 2025-04-19 21:10:06,216 | INFO     | adding to output.list: log.44075483._082084.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/63/log.44075483._082084.job.log.tg
[2025-04-19 23:10:29] 2025-04-19 21:10:06,217 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 23:10:29] 2025-04-19 21:10:06,217 | INFO     | summary of transferred files:
[2025-04-19 23:10:29] 2025-04-19 21:10:06,217 | INFO     |  -- lfn=log.44075483._082084.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 23:10:29] 2025-04-19 21:10:06,217 | INFO     | stage-out finished correctly
[2025-04-19 23:10:29] 2025-04-19 21:10:06,285 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 23:10:29] 2025-04-19 21:10:06,793 | INFO     | monitor loop #309: job 0:6607713828 is in state 'finished'
[2025-04-19 23:10:29] 2025-04-19 21:10:06,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:10:29] 2025-04-19 21:10:07,050 | INFO     | job 6607713828 has state=finished
[2025-04-19 23:10:29] 2025-04-19 21:10:07,051 | INFO     | preparing for final server update for job 6607713828 in state='finished'
[2025-04-19 23:10:29] 2025-04-19 21:10:07,051 | INFO     | this job has now completed (state=finished)
[2025-04-19 23:10:29] 2025-04-19 21:10:07,051 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 23:10:29] 2025-04-19 21:10:07,051 | INFO     | log transfer has been attempted: DONE
[2025-04-19 23:10:29] 2025-04-19 21:10:07,051 | INFO     | job 6607713828 has finished - writing final server update
[2025-04-19 23:10:29] 2025-04-19 21:10:07,051 | INFO     | total number of processed events: 400 (read)
[2025-04-19 23:10:29] 2025-04-19 21:10:07,065 | INFO     | executing command: lscpu
[2025-04-19 23:10:29] 2025-04-19 21:10:07,097 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 23:10:29] 2025-04-19 21:10:09,296 | INFO     | monitor loop #310: job 0:6607713828 is in state 'finished'
[2025-04-19 23:10:29] 2025-04-19 21:10:09,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:10:29] 2025-04-19 21:10:11,259 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 23:10:29] 2025-04-19 21:10:11,259 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6607713828/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 23:10:29] 2025-04-19 21:10:11,260 | INFO     | extracted standard info from prmon json
[2025-04-19 23:10:29] 2025-04-19 21:10:11,260 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 23:10:29] 2025-04-19 21:10:11,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 23:10:29] 2025-04-19 21:10:11,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 23:10:29] 2025-04-19 21:10:11,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 23:10:29] 2025-04-19 21:10:11,262 | INFO     | fitting pss+swap vs Time
[2025-04-19 23:10:29] 2025-04-19 21:10:11,262 | INFO     | sum of square deviations: 70364110.0
[2025-04-19 23:10:29] 2025-04-19 21:10:11,262 | INFO     | sum of deviations: -4270492757.9999995
[2025-04-19 23:10:29] 2025-04-19 21:10:11,262 | INFO     | mean x: 1745095028.0
[2025-04-19 23:10:29] 2025-04-19 21:10:11,263 | INFO     | mean y: 2479582.5573770492
[2025-04-19 23:10:29] 2025-04-19 21:10:11,263 | INFO     | -- intersect: 105914650987.7781
[2025-04-19 23:10:29] 2025-04-19 21:10:11,263 | INFO     | intersect: 105914650987.7781
[2025-04-19 23:10:29] 2025-04-19 21:10:11,263 | INFO     | chi2: 0.157514372578636
[2025-04-19 23:10:29] 2025-04-19 21:10:11,263 | INFO     | -- intersect: 105914650987.7781
[2025-04-19 23:10:29] 2025-04-19 21:10:11,263 | INFO     | current memory leak: -60.69 B/s (using 61 data points, chi2=0.16)
[2025-04-19 23:10:29] 2025-04-19 21:10:11,263 | INFO     | ..............................
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | . Timing measurements:
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | . get job = 0 s
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | . initial setup = 1 s
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | . payload setup = 5 s
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | . stage-in = 0 s
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | . payload execution = 4111 s
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | . stage-out = 0 s
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | . log creation = 0 s
[2025-04-19 23:10:29] 2025-04-19 21:10:11,264 | INFO     | ..............................
[2025-04-19 23:10:29] 2025-04-19 21:10:11,335 | INFO     | 
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | job summary report
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | --------------------------------------------------
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | PanDA job id: 6607713828
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | task id: 44075483
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | errors: (none)
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | pilot state: finished 
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | transexitcode: 0
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | exeerrorcode: 0
[2025-04-19 23:10:29] 2025-04-19 21:10:11,336 | INFO     | exeerrordiag: 
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | exitcode: 0
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | exitmsg: OK
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | cpuconsumptiontime: 43457 s
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | nevents: 400
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | neventsw: 0
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | pid: 2872128
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | pgrp: 2872128
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | corecount: 12
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | event service: False
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | sizes: {0: 2426652, 1: 2426851, 4: 2427057, 11: 2427085, 4120: 2452887, 4122: 2462012, 4127: 2462126}
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | --------------------------------------------------
[2025-04-19 23:10:29] 2025-04-19 21:10:11,337 | INFO     | 
[2025-04-19 23:10:29] 2025-04-19 21:10:11,338 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-19 23:10:29] 2025-04-19 21:10:11,357 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,357 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,357 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | job 6607713828 has completed (purged errors)
[2025-04-19 23:10:29] 2025-04-19 21:10:11,359 | INFO     | overall cleanup function is called
[2025-04-19 23:10:29] 2025-04-19 21:10:12,313 | INFO     | PID=2864806 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 23:10:29] 2025-04-19 21:10:12,366 | INFO     | --- collectZombieJob: --- 10, [2872128]
[2025-04-19 23:10:29] 2025-04-19 21:10:12,366 | INFO     | zombie collector waiting for pid 2872128
[2025-04-19 23:10:29] 2025-04-19 21:10:12,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 23:10:29] 2025-04-19 21:10:12,366 | INFO     | collected zombie processes
[2025-04-19 23:10:29] 2025-04-19 21:10:12,367 | INFO     | will attempt to kill all subprocesses of pid=2872128
[2025-04-19 23:10:29] 2025-04-19 21:10:12,443 | INFO     | process IDs to be killed: [2872128] (in reverse order)
[2025-04-19 23:10:29] 2025-04-19 21:10:12,477 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 23:10:29] 2025-04-19 21:10:12,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 23:10:29] 2025-04-19 21:10:12,479 | INFO     | did not find any defunct processes belonging to 2872128
[2025-04-19 23:10:29] 2025-04-19 21:10:12,481 | INFO     | did not find any defunct processes belonging to 2872128
[2025-04-19 23:10:29] 2025-04-19 21:10:12,481 | INFO     | ready for new job
[2025-04-19 23:10:29] 2025-04-19 21:10:12,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 23:10:29] 2025-04-19 21:10:12,482 | INFO     | **************************************
[2025-04-19 23:10:29] 2025-04-19 21:10:12,483 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 23:10:29] 2025-04-19 21:10:12,483 | INFO     | **************************************
[2025-04-19 23:10:29] 2025-04-19 21:10:12,483 | INFO     | 
[2025-04-19 23:10:29] 2025-04-19 21:10:12,496 | INFO     | architecture information:
[2025-04-19 23:10:29] 2025-04-19 21:10:12,496 | INFO     | executing command: cat /etc/os-release
[2025-04-19 23:10:29] 2025-04-19 21:10:12,505 | INFO     | cat /etc/os-release:
[2025-04-19 23:10:29] NAME="CentOS Linux"
[2025-04-19 23:10:29] VERSION="7 (Core)"
[2025-04-19 23:10:29] ID="centos"
[2025-04-19 23:10:29] ID_LIKE="rhel fedora"
[2025-04-19 23:10:29] VERSION_ID="7"
[2025-04-19 23:10:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 23:10:29] ANSI_COLOR="0;31"
[2025-04-19 23:10:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 23:10:29] HOME_URL="https://www.centos.org/"
[2025-04-19 23:10:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 23:10:29] 
[2025-04-19 23:10:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 23:10:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 23:10:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 23:10:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 23:10:29] 
[2025-04-19 23:10:29] 2025-04-19 21:10:12,505 | INFO     | **************************************
[2025-04-19 23:10:29] 2025-04-19 21:10:13,008 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-19 23:10:29] 2025-04-19 21:10:13,020 | INFO     | sufficient remaining disk space (226554281984 B)
[2025-04-19 23:10:29] 2025-04-19 21:10:13,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 23:10:29] 2025-04-19 21:10:13,020 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 23:10:29] 2025-04-19 21:10:13,020 | INFO     | update_server=False
[2025-04-19 23:10:29] 2025-04-19 21:10:13,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 23:10:29] 2025-04-19 21:10:13,020 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 23:10:29] 2025-04-19 21:10:13,021 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 23:10:29] 2025-04-19 21:10:13,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 23:10:29] 2025-04-19 21:10:13,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:10:29] 2025-04-19 21:10:13,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 23:10:29] 2025-04-19 21:10:13,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:10:29] 2025-04-19 21:10:13,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 23:10:29] 2025-04-19 21:10:13,022 | INFO     | aborting loop
[2025-04-19 23:10:29] 2025-04-19 21:10:13,154 | INFO     | all payload control threads have been joined
[2025-04-19 23:10:29] 2025-04-19 21:10:13,795 | INFO     | all job control threads have been joined
[2025-04-19 23:10:29] 2025-04-19 21:10:13,911 | INFO     | all data control threads have been joined
[2025-04-19 23:10:29] 2025-04-19 21:10:14,026 | INFO     | [job] retrieve thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,028 | INFO     | [job] queue monitor thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,028 | INFO     | [job] job monitor thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,159 | INFO     | [payload] control thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,300 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 23:10:29] 2025-04-19 21:10:14,696 | INFO     | [job] validate thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,720 | INFO     | [payload] failed_post thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,801 | INFO     | [job] control thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,836 | INFO     | [data] copytool_in thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,893 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,917 | INFO     | [data] control thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,964 | INFO     | [payload] validate_post thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:14,998 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:16,306 | INFO     | [data] copytool_out thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:17,028 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:23,496 | INFO     | job.realtimelogging is not enabled
[2025-04-19 23:10:29] 2025-04-19 21:10:24,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 23:10:29] 2025-04-19 21:10:24,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736794990400)>', '<ExcThread(monitor, started 139735804663552)>']
[2025-04-19 23:10:29] 2025-04-19 21:10:25,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 23:10:29] 2025-04-19 21:10:25,083 | INFO     | [monitor] control thread has ended
[2025-04-19 23:10:29] 2025-04-19 21:10:29,627 | INFO     | all workflow threads have been joined
[2025-04-19 23:10:29] 2025-04-19 21:10:29,627 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 23:10:29] 2025-04-19 21:10:29,627 | INFO     | traces error code: 0
[2025-04-19 23:10:29] 2025-04-19 21:10:29,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 23:10:29] 2025-04-19 21:10:29,702 [wrapper] ==== pilot stdout END ====
[2025-04-19 23:10:29] 2025-04-19 21:10:29,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 23:10:29] 2025-04-19 21:10:29,707 [wrapper] pilotpid: 2864806
[2025-04-19 23:10:29] 2025-04-19 21:10:29,709 [wrapper] Pilot exit status: 0
[2025-04-19 23:10:29] 2025-04-19 21:10:29,717 [wrapper] pandaids: 6607713828
[2025-04-19 23:10:29] 2025-04-19 21:10:29,736 [wrapper] cleanup supervisor_pilot 2913269 2864807
[2025-04-19 23:10:29] 2025-04-19 21:10:29,737 [wrapper] Test setup, not cleaning
[2025-04-19 23:10:29] 2025-04-19 21:10:29,740 [wrapper] apfmon messages muted
[2025-04-19 23:10:29] 2025-04-19 21:10:29,742 [wrapper] ==== wrapper stdout END ====
[2025-04-19 23:10:29] 2025-04-19 21:10:29,743 [wrapper] ==== wrapper stderr END ====
[2025-04-19 23:10:29]  *** Error codes and diagnostics ***
[2025-04-19 23:10:29]     "exeErrorCode": 0,
[2025-04-19 23:10:29]     "exeErrorDiag": "",
[2025-04-19 23:10:29]     "pilotErrorCode": 0,
[2025-04-19 23:10:29]     "pilotErrorDiag": "",
[2025-04-19 23:10:29]  *** Listing of results directory ***
[2025-04-19 23:10:29] total 410060
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc    495897 Apr 19 13:19 pilot3.tar.gz
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc      5111 Apr 19 13:24 queuedata.json
[2025-04-19 23:10:29] -rwx------ 1 boinc boinc     37140 Apr 19 13:24 runpilot2-wrapper.sh
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc       100 Apr 19 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 23:10:29] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 22:01 run_atlas
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc       105 Apr 19 22:01 job.xml
[2025-04-19 23:10:29] -rw-r--r-- 2 boinc boinc 222569063 Apr 19 22:01 EVNT.44075481._003182.pool.root.1
[2025-04-19 23:10:29] -rw-r--r-- 2 boinc boinc     17569 Apr 19 22:01 start_atlas.sh
[2025-04-19 23:10:29] drwxrwx--x 2 boinc boinc        68 Apr 19 22:01 shared
[2025-04-19 23:10:29] -rw-r--r-- 2 boinc boinc    508893 Apr 19 22:01 input.tar.gz
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc      6259 Apr 19 22:01 init_data.xml
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc         0 Apr 19 22:01 boinc_lockfile
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc      2578 Apr 19 22:01 pandaJob.out
[2025-04-19 23:10:29] -rw------- 1 boinc boinc       124 Apr 19 22:01 setup.sh.local
[2025-04-19 23:10:29] -rw------- 1 boinc boinc    991284 Apr 19 22:01 agis_schedconf.cvmfs.json
[2025-04-19 23:10:29] -rw------- 1 boinc boinc   1618536 Apr 19 22:01 agis_ddmendpoints.agis.ALL.json
[2025-04-19 23:10:29] drwx------ 4 boinc boinc      4096 Apr 19 22:01 pilot3
[2025-04-19 23:10:29] -rw------- 1 boinc boinc 191937885 Apr 19 23:09 HITS.44075483._082084.pool.root.1
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc       529 Apr 19 23:09 boinc_task_state.xml
[2025-04-19 23:10:29] -rw------- 1 boinc boinc        95 Apr 19 23:10 pilot_heartbeat.json
[2025-04-19 23:10:29] -rw------- 1 boinc boinc      1018 Apr 19 23:10 memory_monitor_summary.json
[2025-04-19 23:10:29] -rw------- 1 boinc boinc    367398 Apr 19 23:10 log.44075483._082084.job.log.tgz.1
[2025-04-19 23:10:29] -rw------- 1 boinc boinc      7691 Apr 19 23:10 heartbeat.json
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc      8192 Apr 19 23:10 boinc_mmap_file
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc        27 Apr 19 23:10 wrapper_checkpoint.txt
[2025-04-19 23:10:29] -rw------- 1 boinc boinc      4549 Apr 19 23:10 pilotlog.txt
[2025-04-19 23:10:29] -rw------- 1 boinc boinc    402504 Apr 19 23:10 log.44075483._082084.job.log.1
[2025-04-19 23:10:29] -rw------- 1 boinc boinc       357 Apr 19 23:10 output.list
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc       620 Apr 19 23:10 runtime_log
[2025-04-19 23:10:29] -rw------- 1 boinc boinc    788480 Apr 19 23:10 result.tar.gz
[2025-04-19 23:10:29] -rw------- 1 boinc boinc       655 Apr 19 23:10 ywMKDmHULQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLnhLDmS36fkn.diag
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc      9837 Apr 19 23:10 runtime_log.err
[2025-04-19 23:10:29] -rw-r--r-- 1 boinc boinc     21483 Apr 19 23:10 stderr.txt
[2025-04-19 23:10:29] HITS file was successfully produced:
[2025-04-19 23:10:29] -rw------- 1 boinc boinc 191937885 Apr 19 23:09 shared/HITS.pool.root.1
[2025-04-19 23:10:29]  *** Contents of shared directory: ***
[2025-04-19 23:10:29] total 406088
[2025-04-19 23:10:29] -rw-r--r-- 2 boinc boinc 222569063 Apr 19 22:01 ATLAS.root_0
[2025-04-19 23:10:29] -rw-r--r-- 2 boinc boinc     17569 Apr 19 22:01 start_atlas.sh
[2025-04-19 23:10:29] -rw-r--r-- 2 boinc boinc    508893 Apr 19 22:01 input.tar.gz
[2025-04-19 23:10:29] -rw------- 1 boinc boinc 191937885 Apr 19 23:09 HITS.pool.root.1
[2025-04-19 23:10:29] -rw------- 1 boinc boinc    788480 Apr 19 23:10 result.tar.gz
23:10:30 (2861060): run_atlas exited; CPU time 43480.680885
23:10:30 (2861060): called boinc_finish(0)

</stderr_txt>
]]>

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