Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:12:12 (438596): wrapper (7.7.26015): starting
18:12:12 (438596): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 18:12:12] Arguments: --nthreads 12
[2025-04-19 18:12:12] Threads: 12
[2025-04-19 18:12:12] Checking for CVMFS
[2025-04-19 18:12:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 18:12:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 18:12:13] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 18:12:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 18:12:13] 2.11.5.0 4478 1496 211448 145043 3 188 3115433 4194305 11038 130560 0 20946459 99.999 605594 1800 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-04-19 18:12:13] CVMFS is ok
[2025-04-19 18:12:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 18:12:13] Checking for apptainer binary...
[2025-04-19 18:12:13] apptainer is not installed, using version from CVMFS
[2025-04-19 18:12:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 18:12:13] mikemint-desktop
[2025-04-19 18:12:13] apptainer works
[2025-04-19 18:12:13] Set ATHENA_PROC_NUMBER=12
[2025-04-19 18:12:13] Set ATHENA_CORE_NUMBER=12
[2025-04-19 18:12:13] Starting ATLAS job with PandaID=6607610725
[2025-04-19 18:12:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 19:46:41]  *** The last 200 lines of the pilot log: ***
[2025-04-19 19:46:41] ]
[2025-04-19 19:46:41] 2025-04-19 17:46:02,022 | INFO     | transferring file log.44075483._079978.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6607610725/log.44075483._079978.job.log.tgz.1 to /var/lib/boinc
[2025-04-19 19:46:41] 2025-04-19 17:46:02,022 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6607610725/log.44075483._079978.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.440754
[2025-04-19 19:46:41] 2025-04-19 17:46:02,217 | INFO     | adding to output.list: log.44075483._079978.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/41/log.44075483._079978.job.log.tg
[2025-04-19 19:46:41] 2025-04-19 17:46:02,218 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 19:46:41] 2025-04-19 17:46:02,219 | INFO     | summary of transferred files:
[2025-04-19 19:46:41] 2025-04-19 17:46:02,219 | INFO     |  -- lfn=log.44075483._079978.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 19:46:41] 2025-04-19 17:46:02,219 | INFO     | stage-out finished correctly
[2025-04-19 19:46:41] 2025-04-19 17:46:02,497 | INFO     | monitor loop #371: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:02,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:05,009 | INFO     | monitor loop #372: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:05,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:05,505 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 19:46:41] 2025-04-19 17:46:05,725 | INFO     | job 6607610725 has state=finished
[2025-04-19 19:46:41] 2025-04-19 17:46:05,725 | INFO     | preparing for final server update for job 6607610725 in state='finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:05,726 | INFO     | this job has now completed (state=finished)
[2025-04-19 19:46:41] 2025-04-19 17:46:05,726 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 19:46:41] 2025-04-19 17:46:05,726 | INFO     | log transfer has been attempted: DONE
[2025-04-19 19:46:41] 2025-04-19 17:46:05,726 | INFO     | job 6607610725 has finished - writing final server update
[2025-04-19 19:46:41] 2025-04-19 17:46:05,726 | INFO     | total number of processed events: 400 (read)
[2025-04-19 19:46:41] 2025-04-19 17:46:05,785 | INFO     | executing command: lscpu
[2025-04-19 19:46:41] 2025-04-19 17:46:06,046 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 19:46:41] 2025-04-19 17:46:07,537 | INFO     | monitor loop #373: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:07,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:10,049 | INFO     | monitor loop #374: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:10,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:12,560 | INFO     | monitor loop #375: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:12,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:15,069 | INFO     | monitor loop #376: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:15,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:17,581 | INFO     | monitor loop #377: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:17,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:20,090 | INFO     | PID=450060 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 19:46:41] 2025-04-19 17:46:20,090 | INFO     | .. there are 16 such processes running
[2025-04-19 19:46:41] 2025-04-19 17:46:20,105 | INFO     | monitor loop #378: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:20,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:22,616 | INFO     | monitor loop #379: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:22,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:25,125 | INFO     | monitor loop #380: job 0:6607610725 is in state 'finished'
[2025-04-19 19:46:41] 2025-04-19 17:46:25,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 19:46:41] 2025-04-19 17:46:25,951 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 19:46:41] 2025-04-19 17:46:25,952 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6607610725/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 19:46:41] 2025-04-19 17:46:25,953 | INFO     | extracted standard info from prmon json
[2025-04-19 19:46:41] 2025-04-19 17:46:25,953 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 19:46:41] 2025-04-19 17:46:25,953 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 19:46:41] 2025-04-19 17:46:25,954 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 19:46:41] 2025-04-19 17:46:25,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 19:46:41] 2025-04-19 17:46:25,956 | INFO     | fitting pss+swap vs Time
[2025-04-19 19:46:41] 2025-04-19 17:46:25,957 | INFO     | sum of square deviations: 190403570.0
[2025-04-19 19:46:41] 2025-04-19 17:46:25,957 | INFO     | sum of deviations: 5127129544.000001
[2025-04-19 19:46:41] 2025-04-19 17:46:25,957 | INFO     | mean x: 1745082041.0
[2025-04-19 19:46:41] 2025-04-19 17:46:25,958 | INFO     | mean y: 2634613.4235294117
[2025-04-19 19:46:41] 2025-04-19 17:46:25,958 | INFO     | -- intersect: -46988404940.692604
[2025-04-19 19:46:41] 2025-04-19 17:46:25,958 | INFO     | intersect: -46988404940.692604
[2025-04-19 19:46:41] 2025-04-19 17:46:25,958 | INFO     | chi2: 0.11464343894511345
[2025-04-19 19:46:41] 2025-04-19 17:46:25,958 | INFO     | -- intersect: -46988404940.692604
[2025-04-19 19:46:41] 2025-04-19 17:46:25,958 | INFO     | current memory leak: 26.93 B/s (using 85 data points, chi2=0.11)
[2025-04-19 19:46:41] 2025-04-19 17:46:25,959 | INFO     | ..............................
[2025-04-19 19:46:41] 2025-04-19 17:46:25,959 | INFO     | . Timing measurements:
[2025-04-19 19:46:41] 2025-04-19 17:46:25,959 | INFO     | . get job = 0 s
[2025-04-19 19:46:41] 2025-04-19 17:46:25,959 | INFO     | . initial setup = 1 s
[2025-04-19 19:46:41] 2025-04-19 17:46:25,959 | INFO     | . payload setup = 7 s
[2025-04-19 19:46:41] 2025-04-19 17:46:25,959 | INFO     | . stage-in = 0 s
[2025-04-19 19:46:41] 2025-04-19 17:46:25,959 | INFO     | . payload execution = 5586 s
[2025-04-19 19:46:41] 2025-04-19 17:46:25,960 | INFO     | . stage-out = 2 s
[2025-04-19 19:46:41] 2025-04-19 17:46:25,960 | INFO     | . log creation = 0 s
[2025-04-19 19:46:41] 2025-04-19 17:46:25,960 | INFO     | ..............................
[2025-04-19 19:46:41] 2025-04-19 17:46:26,145 | INFO     | 
[2025-04-19 19:46:41] 2025-04-19 17:46:26,145 | INFO     | job summary report
[2025-04-19 19:46:41] 2025-04-19 17:46:26,145 | INFO     | --------------------------------------------------
[2025-04-19 19:46:41] 2025-04-19 17:46:26,145 | INFO     | PanDA job id: 6607610725
[2025-04-19 19:46:41] 2025-04-19 17:46:26,145 | INFO     | task id: 44075483
[2025-04-19 19:46:41] 2025-04-19 17:46:26,145 | INFO     | errors: (none)
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | pilot state: finished 
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | transexitcode: 0
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | exeerrorcode: 0
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | exeerrordiag: 
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | exitcode: 0
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | exitmsg: OK
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | cpuconsumptiontime: 43484 s
[2025-04-19 19:46:41] 2025-04-19 17:46:26,146 | INFO     | nevents: 400
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | neventsw: 0
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | pid: 488170
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | pgrp: 488170
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | corecount: 12
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | event service: False
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | sizes: {0: 2426658, 1: 2426857, 6: 2427063, 11: 2427091, 5597: 2453759, 5598: 2453758, 5601: 2462897, 5604: 2462953, 5624: 2463123}
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | --------------------------------------------------
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | 
[2025-04-19 19:46:41] 2025-04-19 17:46:26,147 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-04-19 19:46:41] 2025-04-19 17:46:26,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 19:46:41] 2025-04-19 17:46:26,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 19:46:41] 2025-04-19 17:46:26,254 | INFO     | job 6607610725 has completed (purged errors)
[2025-04-19 19:46:41] 2025-04-19 17:46:26,254 | INFO     | overall cleanup function is called
[2025-04-19 19:46:41] 2025-04-19 17:46:27,265 | INFO     | --- collectZombieJob: --- 10, [488170]
[2025-04-19 19:46:41] 2025-04-19 17:46:27,265 | INFO     | zombie collector waiting for pid 488170
[2025-04-19 19:46:41] 2025-04-19 17:46:27,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 19:46:41] 2025-04-19 17:46:27,265 | INFO     | collected zombie processes
[2025-04-19 19:46:41] 2025-04-19 17:46:27,266 | INFO     | will attempt to kill all subprocesses of pid=488170
[2025-04-19 19:46:41] 2025-04-19 17:46:27,866 | INFO     | process IDs to be killed: [488170] (in reverse order)
[2025-04-19 19:46:41] 2025-04-19 17:46:28,057 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 19:46:41] 2025-04-19 17:46:28,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 19:46:41] 2025-04-19 17:46:28,076 | INFO     | did not find any defunct processes belonging to 488170
[2025-04-19 19:46:41] 2025-04-19 17:46:28,094 | INFO     | did not find any defunct processes belonging to 488170
[2025-04-19 19:46:41] 2025-04-19 17:46:28,095 | INFO     | ready for new job
[2025-04-19 19:46:41] 2025-04-19 17:46:28,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 19:46:41] 2025-04-19 17:46:28,096 | INFO     | **************************************
[2025-04-19 19:46:41] 2025-04-19 17:46:28,096 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 19:46:41] 2025-04-19 17:46:28,097 | INFO     | **************************************
[2025-04-19 19:46:41] 2025-04-19 17:46:28,097 | INFO     | 
[2025-04-19 19:46:41] 2025-04-19 17:46:28,108 | INFO     | architecture information:
[2025-04-19 19:46:41] 2025-04-19 17:46:28,109 | INFO     | executing command: cat /etc/os-release
[2025-04-19 19:46:41] 2025-04-19 17:46:28,129 | INFO     | cat /etc/os-release:
[2025-04-19 19:46:41] NAME="CentOS Linux"
[2025-04-19 19:46:41] VERSION="7 (Core)"
[2025-04-19 19:46:41] ID="centos"
[2025-04-19 19:46:41] ID_LIKE="rhel fedora"
[2025-04-19 19:46:41] VERSION_ID="7"
[2025-04-19 19:46:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 19:46:41] ANSI_COLOR="0;31"
[2025-04-19 19:46:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 19:46:41] HOME_URL="https://www.centos.org/"
[2025-04-19 19:46:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 19:46:41] 
[2025-04-19 19:46:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 19:46:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 19:46:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 19:46:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 19:46:41] 
[2025-04-19 19:46:41] 2025-04-19 17:46:28,129 | INFO     | **************************************
[2025-04-19 19:46:41] 2025-04-19 17:46:28,633 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-04-19 19:46:41] 2025-04-19 17:46:28,660 | INFO     | sufficient remaining disk space (176177545216 B)
[2025-04-19 19:46:41] 2025-04-19 17:46:28,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 19:46:41] 2025-04-19 17:46:28,660 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 19:46:41] 2025-04-19 17:46:28,660 | INFO     | update_server=False
[2025-04-19 19:46:41] 2025-04-19 17:46:28,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 19:46:41] 2025-04-19 17:46:28,661 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 19:46:41] 2025-04-19 17:46:28,661 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 19:46:41] 2025-04-19 17:46:28,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 19:46:41] 2025-04-19 17:46:28,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 19:46:41] 2025-04-19 17:46:28,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 19:46:41] 2025-04-19 17:46:28,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 19:46:41] 2025-04-19 17:46:28,662 | INFO     | aborting loop
[2025-04-19 19:46:41] 2025-04-19 17:46:28,721 | INFO     | all data control threads have been joined
[2025-04-19 19:46:41] 2025-04-19 17:46:29,090 | INFO     | all payload control threads have been joined
[2025-04-19 19:46:41] 2025-04-19 17:46:29,665 | INFO     | [job] retrieve thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:29,666 | INFO     | [job] job monitor thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:29,726 | INFO     | [data] control thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:29,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:29,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 19:46:41] 2025-04-19 17:46:29,853 | INFO     | [payload] validate_post thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:29,953 | INFO     | [data] copytool_in thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:29,973 | INFO     | all job control threads have been joined
[2025-04-19 19:46:41] 2025-04-19 17:46:30,069 | INFO     | [payload] failed_post thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:30,093 | INFO     | [payload] control thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:30,397 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:30,665 | INFO     | [data] copytool_out thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:30,805 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:30,806 | INFO     | [job] validate thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:30,977 | INFO     | [job] control thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:31,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 19:46:41] 2025-04-19 17:46:31,111 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:32,089 | INFO     | [job] queue monitor thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:33,801 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 19:46:41] 2025-04-19 17:46:35,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140277027436352)>', '<ExcThread(monitor, started 140276433671936)>']
[2025-04-19 19:46:41] 2025-04-19 17:46:36,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 19:46:41] 2025-04-19 17:46:36,689 | INFO     | [monitor] control thread has ended
[2025-04-19 19:46:41] 2025-04-19 17:46:40,889 | INFO     | all workflow threads have been joined
[2025-04-19 19:46:41] 2025-04-19 17:46:40,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 19:46:41] 2025-04-19 17:46:40,889 | INFO     | traces error code: 0
[2025-04-19 19:46:41] 2025-04-19 17:46:40,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 19:46:41] 2025-04-19 17:46:41,032 [wrapper] ==== pilot stdout END ====
[2025-04-19 19:46:41] 2025-04-19 17:46:41,035 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 19:46:41] 2025-04-19 17:46:41,039 [wrapper] pilotpid: 450060
[2025-04-19 19:46:41] 2025-04-19 17:46:41,042 [wrapper] Pilot exit status: 0
[2025-04-19 19:46:41] 2025-04-19 17:46:41,055 [wrapper] pandaids: 6607610725
[2025-04-19 19:46:41] 2025-04-19 17:46:41,175 [wrapper] cleanup supervisor_pilot  873311 450062
[2025-04-19 19:46:41] 2025-04-19 17:46:41,179 [wrapper] Test setup, not cleaning
[2025-04-19 19:46:41] 2025-04-19 17:46:41,183 [wrapper] apfmon messages muted
[2025-04-19 19:46:41] 2025-04-19 17:46:41,186 [wrapper] ==== wrapper stdout END ====
[2025-04-19 19:46:41] 2025-04-19 17:46:41,190 [wrapper] ==== wrapper stderr END ====
[2025-04-19 19:46:41]  *** Error codes and diagnostics ***
[2025-04-19 19:46:41]     "exeErrorCode": 0,
[2025-04-19 19:46:41]     "exeErrorDiag": "",
[2025-04-19 19:46:41]     "pilotErrorCode": 0,
[2025-04-19 19:46:41]     "pilotErrorDiag": "",
[2025-04-19 19:46:41]  *** Listing of results directory ***
[2025-04-19 19:46:41] insgesamt 412744
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc    495897 Apr 19 10:07 pilot3.tar.gz
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc      5111 Apr 19 10:11 queuedata.json
[2025-04-19 19:46:41] -rwx------ 1 boinc boinc     37140 Apr 19 10:12 runpilot2-wrapper.sh
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc       100 Apr 19 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 19:46:41] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 18:12 run_atlas
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc       105 Apr 19 18:12 job.xml
[2025-04-19 19:46:41] -rw-r--r-- 2 boinc boinc     17569 Apr 19 18:12 start_atlas.sh
[2025-04-19 19:46:41] drwxrwx--x 2 boinc boinc      4096 Apr 19 18:12 shared
[2025-04-19 19:46:41] -rw-r--r-- 2 boinc boinc    508887 Apr 19 18:12 input.tar.gz
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc      6636 Apr 19 18:12 init_data.xml
[2025-04-19 19:46:41] -rw-r--r-- 2 boinc boinc 221967131 Apr 19 18:12 EVNT.44075481._003101.pool.root.1
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc         0 Apr 19 18:12 boinc_lockfile
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc      2578 Apr 19 18:12 pandaJob.out
[2025-04-19 19:46:41] -rw------- 1 boinc boinc       456 Apr 19 18:12 setup.sh.local
[2025-04-19 19:46:41] -rw------- 1 boinc boinc    991300 Apr 19 18:12 agis_schedconf.cvmfs.json
[2025-04-19 19:46:41] -rw------- 1 boinc boinc   1618536 Apr 19 18:12 agis_ddmendpoints.agis.ALL.json
[2025-04-19 19:46:41] drwx------ 4 boinc boinc      4096 Apr 19 18:12 pilot3
[2025-04-19 19:46:41] -rw------- 1 boinc boinc 195059967 Apr 19 19:45 HITS.44075483._079978.pool.root.1
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc       529 Apr 19 19:45 boinc_task_state.xml
[2025-04-19 19:46:41] -rw------- 1 boinc boinc        95 Apr 19 19:45 pilot_heartbeat.json
[2025-04-19 19:46:41] -rw------- 1 boinc boinc      1040 Apr 19 19:45 memory_monitor_summary.json
[2025-04-19 19:46:41] -rw------- 1 boinc boinc    355291 Apr 19 19:46 log.44075483._079978.job.log.tgz.1
[2025-04-19 19:46:41] -rw------- 1 boinc boinc      7670 Apr 19 19:46 heartbeat.json
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc        27 Apr 19 19:46 wrapper_checkpoint.txt
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc      8192 Apr 19 19:46 boinc_mmap_file
[2025-04-19 19:46:41] -rw------- 1 boinc boinc      4484 Apr 19 19:46 pilotlog.txt
[2025-04-19 19:46:41] -rw------- 1 boinc boinc    519898 Apr 19 19:46 log.44075483._079978.job.log.1
[2025-04-19 19:46:41] -rw------- 1 boinc boinc       357 Apr 19 19:46 output.list
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc       620 Apr 19 19:46 runtime_log
[2025-04-19 19:46:41] -rw------- 1 boinc boinc    890880 Apr 19 19:46 result.tar.gz
[2025-04-19 19:46:41] -rw------- 1 boinc boinc       664 Apr 19 19:46 sstNDm8TIQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHQhLDmlom3Ro.diag
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc     11521 Apr 19 19:46 runtime_log.err
[2025-04-19 19:46:41] -rw-r--r-- 1 boinc boinc     22236 Apr 19 19:46 stderr.txt
[2025-04-19 19:46:41] HITS file was successfully produced:
[2025-04-19 19:46:41] -rw------- 1 boinc boinc 195059967 Apr 19 19:45 shared/HITS.pool.root.1
[2025-04-19 19:46:41]  *** Contents of shared directory: ***
[2025-04-19 19:46:41] insgesamt 408660
[2025-04-19 19:46:41] -rw-r--r-- 2 boinc boinc     17569 Apr 19 18:12 start_atlas.sh
[2025-04-19 19:46:41] -rw-r--r-- 2 boinc boinc    508887 Apr 19 18:12 input.tar.gz
[2025-04-19 19:46:41] -rw-r--r-- 2 boinc boinc 221967131 Apr 19 18:12 ATLAS.root_0
[2025-04-19 19:46:41] -rw------- 1 boinc boinc 195059967 Apr 19 19:45 HITS.pool.root.1
[2025-04-19 19:46:41] -rw------- 1 boinc boinc    890880 Apr 19 19:46 result.tar.gz
19:46:42 (438596): run_atlas exited; CPU time 43774.053568
19:46:42 (438596): called boinc_finish(0)

</stderr_txt>
]]>

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