Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 12:40:08 (8116): Detected: vboxwrapper 26206
2025-04-19 12:40:08 (8116): Detected: BOINC client v7.22.2
2025-04-19 12:40:09 (8116): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-19 12:40:09 (8116): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 12:40:10 (8116): Create VM. (boinc_fbce9593991df001, slot#1)
2025-04-19 12:40:10 (8116): Setting Memory Size for VM. (4700MB)
2025-04-19 12:40:11 (8116): Setting CPU Count for VM. (7)
2025-04-19 12:40:11 (8116): Setting Chipset Options for VM.
2025-04-19 12:40:11 (8116): Setting Graphics Controller Options for VM.
2025-04-19 12:40:12 (8116): Setting Boot Options for VM.
2025-04-19 12:40:12 (8116): Setting Network Configuration for NAT.
2025-04-19 12:40:12 (8116): Enabling VM Network Access.
2025-04-19 12:40:13 (8116): Disabling USB Support for VM.
2025-04-19 12:40:13 (8116): Disabling COM Port Support for VM.
2025-04-19 12:40:13 (8116): Disabling LPT Port Support for VM.
2025-04-19 12:40:13 (8116): Disabling Audio Support for VM.
2025-04-19 12:40:14 (8116): Disabling Clipboard Support for VM.
2025-04-19 12:40:14 (8116): Disabling Drag and Drop Support for VM.
2025-04-19 12:40:14 (8116): Adding storage controller(s) to VM.
2025-04-19 12:40:15 (8116): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 12:40:18 (8116): Adding VirtualBox Guest Additions to VM.
2025-04-19 12:40:18 (8116): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 12:40:19 (8116): forwarding host port 63340 to guest port 80
2025-04-19 12:40:19 (8116): Enabling remote desktop for VM.
2025-04-19 12:40:19 (8116): Required extension pack not installed, remote desktop not enabled.
2025-04-19 12:40:19 (8116): Enabling shared directory for VM.
2025-04-19 12:40:20 (8116): Starting VM using VBoxManage interface. (boinc_fbce9593991df001, slot#1)
2025-04-19 12:40:30 (8116): Successfully started VM. (PID = '7196')
2025-04-19 12:40:30 (8116): Reporting VM Process ID to BOINC.
2025-04-19 12:40:30 (8116): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-19 12:40:30 (8116): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 12:40:30 (8116): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 12:40:30 (8116): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 12:40:30 (8116): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 12:40:30 (8116): Detected: Web Application Enabled (http://localhost:63340)
2025-04-19 12:40:30 (8116): Preference change detected
2025-04-19 12:40:30 (8116): Setting CPU throttle for VM. (75%)
2025-04-19 12:40:31 (8116): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 12:40:32 (8116): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 12:40:32 (8116): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 12:40:36 (8116): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 12:40:36 (8116): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 12:40:36 (8116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 12:40:54 (8116): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 12:40:54 (8116): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 12:41:28 (8116): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 12:41:28 (8116): Guest Log: 00:00:00.000346 main     Log opened 2025-04-19T12:41:26.786886000Z
2025-04-19 12:41:28 (8116): Guest Log: 00:00:00.000575 main     OS Product: Linux
2025-04-19 12:41:28 (8116): Guest Log: 00:00:00.000655 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 12:41:28 (8116): Guest Log: 00:00:00.000758 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 12:41:28 (8116): Guest Log: 00:00:00.000848 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 12:41:28 (8116): Guest Log: 00:00:00.000850 main     Process ID: 1333
2025-04-19 12:41:28 (8116): Guest Log: 00:00:00.000851 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 12:41:28 (8116): Guest Log: 00:00:00.002824 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 12:41:29 (8116): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 12:41:29 (8116): Guest Log: [INFO] Mounting shared directory
2025-04-19 12:41:29 (8116): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 12:41:35 (8116): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 12:41:35 (8116): Guest Log: [INFO] Detected branch: prod
2025-04-19 12:41:35 (8116): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 12:41:35 (8116): Guest Log: Copying input files
2025-04-19 12:41:38 (8116): Guest Log: 00:00:10.013538 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 888 326 000ns (GuestNow=1 745 080 898 687 156 000 ns GuestLast=1 745 066 486 798 830 000 ns fSetTimeLastLoop=true )
2025-04-19 12:41:40 (8116): Guest Log: Copied input files into RunAtlas.
2025-04-19 12:41:40 (8116): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 12:41:40 (8116): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 12:41:40 (8116): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 12:41:40 (8116): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 12:43:41 (8116): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 12:43:41 (8116): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 12:43:41 (8116): Guest Log: 2.6.3.0 1616 2 31956 145045 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 12:43:45 (8116): Guest Log: copied the webapp to /var/www
2025-04-19 12:43:45 (8116): Guest Log: ATHENA_PROC_NUMBER=7
2025-04-19 12:43:45 (8116): Guest Log: ATHENA_CORE_NUMBER=7
2025-04-19 12:43:46 (8116): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 12:43:46 (8116): Guest Log:  *** Starting ATLAS job. (PandaID=6607713230 taskID=44075483) ***
2025-04-19 12:55:22 (8116): Guest Log:  *** Job finished ***
2025-04-19 12:55:22 (8116): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:11,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:12,893 | INFO     | [job] queue monitor thread has finished
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:14,528 | INFO     | [data] queue_monitor thread has finished
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:15,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508618303296)>', '<ExcThread(monitor, started 140507900536576)>']
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:15,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:15,610 | INFO     | [monitor] control thread has ended
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,224 | INFO     | all workflow threads have been joined
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,225 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,226 | INFO     | traces error code: 0
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,657 [wrapper] ==== pilot stdout END ====
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,682 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,704 [wrapper] pilotpid: 5994
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,725 [wrapper] Pilot exit status: 0
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,868 [wrapper] pandaids: 6607713230
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,951 [wrapper] cleanup supervisor_pilot  6000 5995
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,966 [wrapper] Test setup, not cleaning
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,981 [wrapper] apfmon messages muted
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:20,995 [wrapper] ==== wrapper stdout END ====
2025-04-19 12:55:22 (8116): Guest Log: 2025-04-19 16:55:21,009 [wrapper] ==== wrapper stderr END ====
2025-04-19 12:55:22 (8116): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 12:55:22 (8116): Guest Log:     "exeErrorCode": 65,
2025-04-19 12:55:22 (8116): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-19 12:55:22 (8116): Guest Log:     "pilotErrorCode": 1305,
2025-04-19 12:55:22 (8116): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-19 12:55:22 (8116): Guest Log:  *** Listing of results directory ***
2025-04-19 12:55:22 (8116): Guest Log: total 4180
2025-04-19 12:55:22 (8116): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 19 10:20 pilot3.tar.gz
2025-04-19 12:55:22 (8116): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 19 10:39 runpilot2-wrapper.sh
2025-04-19 12:55:22 (8116): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 19 10:39 queuedata.json
2025-04-19 12:55:22 (8116): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 19 16:41 start_atlas.sh
2025-04-19 12:55:22 (8116): Guest Log: -rwxr-xr-x. 1 atlas atlas  508887 Apr 19 16:41 input.tar.gz
2025-04-19 12:55:22 (8116): Guest Log: -rwxr-xr-x. 1 atlas atlas    6103 Apr 19 16:41 init_data.xml
2025-04-19 12:55:22 (8116): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 19 16:41 EVNT.44075481._003162.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 12:55:22 (8116): Guest Log: -rw-r--r--. 1 atlas atlas    2579 Apr 19 16:43 pandaJob.out
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas     424 Apr 19 16:43 setup.sh.local
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas  991268 Apr 19 16:44 agis_schedconf.cvmfs.json
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 19 16:44 agis_ddmendpoints.agis.ALL.json
2025-04-19 12:55:22 (8116): Guest Log: drwx------. 4 atlas atlas    4096 Apr 19 16:45 pilot3
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas   51443 Apr 19 16:52 log.44075483._081579.job.log.tgz.1
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas      95 Apr 19 16:54 pilot_heartbeat.json
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas    8132 Apr 19 16:55 heartbeat.json
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 19 16:55 pilotlog.txt
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas  193975 Apr 19 16:55 log.44075483._081579.job.log.1
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas     188 Apr 19 16:55 output.list
2025-04-19 12:55:22 (8116): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 19 16:55 runtime_log
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas  266240 Apr 19 16:55 result.tar.gz
2025-04-19 12:55:22 (8116): Guest Log: -rw-r--r--. 1 atlas atlas   10794 Apr 19 16:55 runtime_log.err
2025-04-19 12:55:22 (8116): Guest Log: -rw-------. 1 atlas atlas     647 Apr 19 16:55 nIHNDm5mKQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPihLDm6h8iXn.diag
2025-04-19 12:55:22 (8116): Guest Log: Looking for outputfile HITS.44075483._081579.pool.root.1
2025-04-19 12:55:22 (8116): Guest Log: No HITS file was produced
2025-04-19 12:55:22 (8116): Guest Log: Successfully finished the ATLAS job!
2025-04-19 12:55:22 (8116): Guest Log: Copying the results back to the shared directory!
2025-04-19 12:55:22 (8116): Guest Log:  *** Contents of shared directory: ***
2025-04-19 12:55:23 (8116): Guest Log: total 218144
2025-04-19 12:55:23 (8116): Guest Log: -rwxrwxrwx. 1 root root 222571538 Apr 19 16:40 ATLAS.root_0
2025-04-19 12:55:23 (8116): Guest Log: -rwxrwxrwx. 1 root root      6103 Apr 19 16:40 init_data.xml
2025-04-19 12:55:23 (8116): Guest Log: -rwxrwxrwx. 1 root root    508887 Apr 19 13:23 input.tar.gz
2025-04-19 12:55:23 (8116): Guest Log: -rwxrwxrwx. 1 root root    266240 Apr 19 16:55 result.tar.gz
2025-04-19 12:55:23 (8116): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 19 13:23 start_atlas.sh
2025-04-19 12:55:23 (8116): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 12:55:23 (8116): VM Completion File Detected.
2025-04-19 12:55:23 (8116): Powering off VM.
2025-04-19 12:55:25 (8116): Successfully stopped VM.
2025-04-19 12:55:25 (8116): Deregistering VM. (boinc_fbce9593991df001, slot#1)
2025-04-19 12:55:25 (8116): Removing network bandwidth throttle group from VM.
2025-04-19 12:55:26 (8116): Removing VM from VirtualBox.
12:55:31 (8116): called boinc_finish(0)

</stderr_txt>
]]>

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