Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:33:33 (17933): wrapper (7.7.26015): starting
09:33:33 (17933): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 09:33:33] Arguments: --nthreads 12
[2025-04-19 09:33:33] Threads: 12
[2025-04-19 09:33:33] Checking for CVMFS
[2025-04-19 09:33:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 09:33:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 09:33:34] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 09:33:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 09:33:34] 2.11.2.0 20204 375263 165972 145039 3 56 10435225 20275200 1 130560 0 23818353 99.970 7767706 50659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 09:33:34] CVMFS is ok
[2025-04-19 09:33:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 09:33:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 09:33:34] Further information can be found at the LHC@home message board.
[2025-04-19 09:33:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 09:33:34] Checking for apptainer binary...
[2025-04-19 09:33:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 09:33:34] Running /usr/bin/apptainer --version
[2025-04-19 09:33:34] apptainer version 1.3.2-1.el7
[2025-04-19 09:33:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 09:33:35] c-205-28.aglt2.org
[2025-04-19 09:33:35] apptainer works
[2025-04-19 09:33:35] Set ATHENA_PROC_NUMBER=12
[2025-04-19 09:33:35] Set ATHENA_CORE_NUMBER=12
[2025-04-19 09:33:35] Starting ATLAS job with PandaID=6607713213
[2025-04-19 09:33:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 10:58:53]  *** The last 200 lines of the pilot log: ***
[2025-04-19 10:58:53]  guid=75c2b494-75ae-4c61-bbce-8557af6af5aa
[2025-04-19 10:58:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 10:58:53]  is_altstaged=None
[2025-04-19 10:58:53]  is_tar=False
[2025-04-19 10:58:53]  lfn=log.44075483._081562.job.log.tgz.1
[2025-04-19 10:58:53]  mtime=0
[2025-04-19 10:58:53]  protocol_id=None
[2025-04-19 10:58:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 10:58:53]  replicas=None
[2025-04-19 10:58:53]  scope=mc23_13p6TeV
[2025-04-19 10:58:53]  status=None
[2025-04-19 10:58:53]  status_code=0
[2025-04-19 10:58:53]  storage_token=
[2025-04-19 10:58:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6607713213/log.44075483._081562.job.log.tgz.1
[2025-04-19 10:58:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/79/log.44075483._081562.job.log.tgz.1
[2025-04-19 10:58:53]  workdir=None
[2025-04-19 10:58:53] ]
[2025-04-19 10:58:53] 2025-04-19 14:58:30,391 | INFO     | transferring file log.44075483._081562.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607713213/log.44075483._081562.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 10:58:53] 2025-04-19 14:58:30,391 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607713213/log.44075483._081562.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._081562.job
[2025-04-19 10:58:53] 2025-04-19 14:58:30,413 | INFO     | adding to output.list: log.44075483._081562.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/75/79/log.44075483._081562.job.log.tg
[2025-04-19 10:58:53] 2025-04-19 14:58:30,413 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 10:58:53] 2025-04-19 14:58:30,414 | INFO     | summary of transferred files:
[2025-04-19 10:58:53] 2025-04-19 14:58:30,414 | INFO     |  -- lfn=log.44075483._081562.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 10:58:53] 2025-04-19 14:58:30,414 | INFO     | stage-out finished correctly
[2025-04-19 10:58:53] 2025-04-19 14:58:32,215 | INFO     | monitor loop #381: job 0:6607713213 is in state 'finished'
[2025-04-19 10:58:53] 2025-04-19 14:58:32,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 10:58:53] 2025-04-19 14:58:32,335 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 10:58:53] 2025-04-19 14:58:32,421 | INFO     | job 6607713213 has state=finished
[2025-04-19 10:58:53] 2025-04-19 14:58:32,422 | INFO     | preparing for final server update for job 6607713213 in state='finished'
[2025-04-19 10:58:53] 2025-04-19 14:58:32,486 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-19 10:58:53] 2025-04-19 14:58:32,486 | INFO     | this job has now completed (state=finished)
[2025-04-19 10:58:53] 2025-04-19 14:58:32,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 10:58:53] 2025-04-19 14:58:32,486 | INFO     | log transfer has been attempted: DONE
[2025-04-19 10:58:53] 2025-04-19 14:58:32,486 | INFO     | job 6607713213 has finished - writing final server update
[2025-04-19 10:58:53] 2025-04-19 14:58:32,486 | INFO     | total number of processed events: 400 (read)
[2025-04-19 10:58:53] 2025-04-19 14:58:32,488 | INFO     | executing command: lscpu
[2025-04-19 10:58:53] 2025-04-19 14:58:32,514 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 10:58:53] 2025-04-19 14:58:34,731 | INFO     | monitor loop #382: job 0:6607713213 is in state 'finished'
[2025-04-19 10:58:53] 2025-04-19 14:58:34,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 10:58:53] 2025-04-19 14:58:37,234 | INFO     | monitor loop #383: job 0:6607713213 is in state 'finished'
[2025-04-19 10:58:53] 2025-04-19 14:58:37,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 10:58:53] 2025-04-19 14:58:38,385 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 10:58:53] 2025-04-19 14:58:38,385 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607713213/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 10:58:53] 2025-04-19 14:58:38,386 | INFO     | extracted standard info from prmon json
[2025-04-19 10:58:53] 2025-04-19 14:58:38,386 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 10:58:53] 2025-04-19 14:58:38,386 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 10:58:53] 2025-04-19 14:58:38,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 10:58:53] 2025-04-19 14:58:38,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 10:58:53] 2025-04-19 14:58:38,388 | INFO     | fitting pss+swap vs Time
[2025-04-19 10:58:53] 2025-04-19 14:58:38,388 | INFO     | sum of square deviations: 136095575.0
[2025-04-19 10:58:53] 2025-04-19 14:58:38,389 | INFO     | sum of deviations: 19205364744.999985
[2025-04-19 10:58:53] 2025-04-19 14:58:38,389 | INFO     | mean x: 1745072250.5
[2025-04-19 10:58:53] 2025-04-19 14:58:38,389 | INFO     | mean y: 2576436.236842105
[2025-04-19 10:58:53] 2025-04-19 14:58:38,389 | INFO     | -- intersect: -246256341807.28784
[2025-04-19 10:58:53] 2025-04-19 14:58:38,389 | INFO     | intersect: -246256341807.28784
[2025-04-19 10:58:53] 2025-04-19 14:58:38,390 | INFO     | chi2: 2.1575923996804582
[2025-04-19 10:58:53] 2025-04-19 14:58:38,390 | INFO     | -- intersect: -246256341807.28784
[2025-04-19 10:58:53] 2025-04-19 14:58:38,390 | INFO     | current memory leak: 141.12 B/s (using 76 data points, chi2=2.16)
[2025-04-19 10:58:53] 2025-04-19 14:58:38,390 | INFO     | ..............................
[2025-04-19 10:58:53] 2025-04-19 14:58:38,390 | INFO     | . Timing measurements:
[2025-04-19 10:58:53] 2025-04-19 14:58:38,390 | INFO     | . get job = 0 s
[2025-04-19 10:58:53] 2025-04-19 14:58:38,390 | INFO     | . initial setup = 2 s
[2025-04-19 10:58:53] 2025-04-19 14:58:38,391 | INFO     | . payload setup = 7 s
[2025-04-19 10:58:53] 2025-04-19 14:58:38,391 | INFO     | . stage-in = 0 s
[2025-04-19 10:58:53] 2025-04-19 14:58:38,391 | INFO     | . payload execution = 5052 s
[2025-04-19 10:58:53] 2025-04-19 14:58:38,391 | INFO     | . stage-out = 0 s
[2025-04-19 10:58:53] 2025-04-19 14:58:38,391 | INFO     | . log creation = 0 s
[2025-04-19 10:58:53] 2025-04-19 14:58:38,391 | INFO     | ..............................
[2025-04-19 10:58:53] 2025-04-19 14:58:38,476 | INFO     | 
[2025-04-19 10:58:53] 2025-04-19 14:58:38,477 | INFO     | job summary report
[2025-04-19 10:58:53] 2025-04-19 14:58:38,477 | INFO     | --------------------------------------------------
[2025-04-19 10:58:53] 2025-04-19 14:58:38,477 | INFO     | PanDA job id: 6607713213
[2025-04-19 10:58:53] 2025-04-19 14:58:38,477 | INFO     | task id: 44075483
[2025-04-19 10:58:53] 2025-04-19 14:58:38,477 | INFO     | errors: (none)
[2025-04-19 10:58:53] 2025-04-19 14:58:38,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 10:58:53] 2025-04-19 14:58:38,478 | INFO     | pilot state: finished 
[2025-04-19 10:58:53] 2025-04-19 14:58:38,478 | INFO     | transexitcode: 0
[2025-04-19 10:58:53] 2025-04-19 14:58:38,478 | INFO     | exeerrorcode: 0
[2025-04-19 10:58:53] 2025-04-19 14:58:38,478 | INFO     | exeerrordiag: 
[2025-04-19 10:58:53] 2025-04-19 14:58:38,478 | INFO     | exitcode: 0
[2025-04-19 10:58:53] 2025-04-19 14:58:38,478 | INFO     | exitmsg: OK
[2025-04-19 10:58:53] 2025-04-19 14:58:38,479 | INFO     | cpuconsumptiontime: 47429 s
[2025-04-19 10:58:53] 2025-04-19 14:58:38,479 | INFO     | nevents: 400
[2025-04-19 10:58:53] 2025-04-19 14:58:38,479 | INFO     | neventsw: 0
[2025-04-19 10:58:53] 2025-04-19 14:58:38,479 | INFO     | pid: 27932
[2025-04-19 10:58:53] 2025-04-19 14:58:38,479 | INFO     | pgrp: 27932
[2025-04-19 10:58:53] 2025-04-19 14:58:38,479 | INFO     | corecount: 12
[2025-04-19 10:58:53] 2025-04-19 14:58:38,480 | INFO     | event service: False
[2025-04-19 10:58:53] 2025-04-19 14:58:38,480 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 5063: 2453263, 5066: 2462204, 5068: 2462260, 5074: 2462558}
[2025-04-19 10:58:53] 2025-04-19 14:58:38,480 | INFO     | --------------------------------------------------
[2025-04-19 10:58:53] 2025-04-19 14:58:38,480 | INFO     | 
[2025-04-19 10:58:53] 2025-04-19 14:58:38,480 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 10:58:53] 2025-04-19 14:58:38,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,507 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 10:58:53] 2025-04-19 14:58:38,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,508 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 10:58:53] 2025-04-19 14:58:38,508 | INFO     | job 6607713213 has completed (purged errors)
[2025-04-19 10:58:53] 2025-04-19 14:58:38,508 | INFO     | overall cleanup function is called
[2025-04-19 10:58:53] 2025-04-19 14:58:39,516 | INFO     | --- collectZombieJob: --- 10, [27932]
[2025-04-19 10:58:53] 2025-04-19 14:58:39,517 | INFO     | zombie collector waiting for pid 27932
[2025-04-19 10:58:53] 2025-04-19 14:58:39,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 10:58:53] 2025-04-19 14:58:39,517 | INFO     | collected zombie processes
[2025-04-19 10:58:53] 2025-04-19 14:58:39,517 | INFO     | will attempt to kill all subprocesses of pid=27932
[2025-04-19 10:58:53] 2025-04-19 14:58:39,611 | INFO     | process IDs to be killed: [27932] (in reverse order)
[2025-04-19 10:58:53] 2025-04-19 14:58:39,664 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 10:58:53] 2025-04-19 14:58:39,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 10:58:53] 2025-04-19 14:58:39,667 | INFO     | did not find any defunct processes belonging to 27932
[2025-04-19 10:58:53] 2025-04-19 14:58:39,670 | INFO     | did not find any defunct processes belonging to 27932
[2025-04-19 10:58:53] 2025-04-19 14:58:39,670 | INFO     | ready for new job
[2025-04-19 10:58:53] 2025-04-19 14:58:39,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 10:58:53] 2025-04-19 14:58:39,671 | INFO     | **************************************
[2025-04-19 10:58:53] 2025-04-19 14:58:39,671 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 10:58:53] 2025-04-19 14:58:39,671 | INFO     | **************************************
[2025-04-19 10:58:53] 2025-04-19 14:58:39,671 | INFO     | 
[2025-04-19 10:58:53] 2025-04-19 14:58:39,672 | INFO     | architecture information:
[2025-04-19 10:58:53] 2025-04-19 14:58:39,672 | INFO     | executing command: cat /etc/os-release
[2025-04-19 10:58:53] 2025-04-19 14:58:39,688 | INFO     | cat /etc/os-release:
[2025-04-19 10:58:53] NAME="CentOS Linux"
[2025-04-19 10:58:53] VERSION="7 (Core)"
[2025-04-19 10:58:53] ID="centos"
[2025-04-19 10:58:53] ID_LIKE="rhel fedora"
[2025-04-19 10:58:53] VERSION_ID="7"
[2025-04-19 10:58:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 10:58:53] ANSI_COLOR="0;31"
[2025-04-19 10:58:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 10:58:53] HOME_URL="https://www.centos.org/"
[2025-04-19 10:58:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 10:58:53] 
[2025-04-19 10:58:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 10:58:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 10:58:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 10:58:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 10:58:53] 
[2025-04-19 10:58:53] 2025-04-19 14:58:39,688 | INFO     | **************************************
[2025-04-19 10:58:53] 2025-04-19 14:58:40,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 10:58:53] 2025-04-19 14:58:40,210 | INFO     | sufficient remaining disk space (29391585280 B)
[2025-04-19 10:58:53] 2025-04-19 14:58:40,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 10:58:53] 2025-04-19 14:58:40,211 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 10:58:53] 2025-04-19 14:58:40,211 | INFO     | update_server=False
[2025-04-19 10:58:53] 2025-04-19 14:58:40,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 10:58:53] 2025-04-19 14:58:40,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 10:58:53] 2025-04-19 14:58:40,671 | INFO     | all data control threads have been joined
[2025-04-19 10:58:53] 2025-04-19 14:58:40,681 | INFO     | all payload control threads have been joined
[2025-04-19 10:58:53] 2025-04-19 14:58:40,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 10:58:53] 2025-04-19 14:58:40,753 | INFO     | aborting loop
[2025-04-19 10:58:53] 2025-04-19 14:58:40,909 | INFO     | all job control threads have been joined
[2025-04-19 10:58:53] 2025-04-19 14:58:41,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 10:58:53] 2025-04-19 14:58:41,141 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 10:58:53] 2025-04-19 14:58:41,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 10:58:53] 2025-04-19 14:58:41,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 10:58:53] 2025-04-19 14:58:41,217 | INFO     | [job] retrieve thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,217 | INFO     | [job] queue monitor thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,259 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,325 | INFO     | [payload] failed_post thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,363 | INFO     | [data] copytool_in thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,677 | INFO     | [data] control thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,686 | INFO     | [payload] control thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,758 | INFO     | [job] job monitor thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:41,914 | INFO     | [job] control thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:42,092 | INFO     | [job] validate thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:42,112 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:42,172 | INFO     | [payload] validate_post thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:42,546 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:42,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 10:58:53] 2025-04-19 14:58:43,020 | INFO     | [data] copytool_out thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:46,940 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 10:58:53] 2025-04-19 14:58:48,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941477758784)>', '<ExcThread(monitor, started 139940721563392)>']
[2025-04-19 10:58:53] 2025-04-19 14:58:49,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 10:58:53] 2025-04-19 14:58:49,177 | INFO     | [monitor] control thread has ended
[2025-04-19 10:58:53] 2025-04-19 14:58:53,357 | INFO     | all workflow threads have been joined
[2025-04-19 10:58:53] 2025-04-19 14:58:53,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 10:58:53] 2025-04-19 14:58:53,362 | INFO     | traces error code: 0
[2025-04-19 10:58:53] 2025-04-19 14:58:53,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 10:58:53] 2025-04-19 14:58:53,448 [wrapper] ==== pilot stdout END ====
[2025-04-19 10:58:53] 2025-04-19 14:58:53,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 10:58:53] 2025-04-19 14:58:53,455 [wrapper] pilotpid: 21534
[2025-04-19 10:58:53] 2025-04-19 14:58:53,458 [wrapper] Pilot exit status: 0
[2025-04-19 10:58:53] 2025-04-19 14:58:53,473 [wrapper] pandaids: 6607713213
[2025-04-19 10:58:53] 2025-04-19 14:58:53,511 [wrapper] cleanup supervisor_pilot 10410 21535
[2025-04-19 10:58:53] 2025-04-19 14:58:53,515 [wrapper] Test setup, not cleaning
[2025-04-19 10:58:53] 2025-04-19 14:58:53,519 [wrapper] apfmon messages muted
[2025-04-19 10:58:53] 2025-04-19 14:58:53,523 [wrapper] ==== wrapper stdout END ====
[2025-04-19 10:58:53] 2025-04-19 14:58:53,527 [wrapper] ==== wrapper stderr END ====
[2025-04-19 10:58:53]  *** Error codes and diagnostics ***
[2025-04-19 10:58:53]     "exeErrorCode": 0,
[2025-04-19 10:58:53]     "exeErrorDiag": "",
[2025-04-19 10:58:53]     "pilotErrorCode": 0,
[2025-04-19 10:58:53]     "pilotErrorDiag": "",
[2025-04-19 10:58:53]  *** Listing of results directory ***
[2025-04-19 10:58:53] total 418140
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 06:20 pilot3.tar.gz
[2025-04-19 10:58:53] -rwx------ 1 boincer umatlas     37140 Apr 19 06:36 runpilot2-wrapper.sh
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 06:36 queuedata.json
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas       100 Apr 19 09:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 10:58:53] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 09:33 run_atlas
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas       105 Apr 19 09:33 job.xml
[2025-04-19 10:58:53] -rw-r--r-- 2 boincer umatlas 224312529 Apr 19 09:33 EVNT.44075481._003161.pool.root.1
[2025-04-19 10:58:53] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:33 start_atlas.sh
[2025-04-19 10:58:53] drwxrwx--x 2 boincer umatlas      4096 Apr 19 09:33 shared
[2025-04-19 10:58:53] -rw-r--r-- 2 boincer umatlas    508885 Apr 19 09:33 input.tar.gz
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas         0 Apr 19 09:33 boinc_lockfile
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 09:33 pandaJob.out
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas       424 Apr 19 09:33 setup.sh.local
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas    991292 Apr 19 09:33 agis_schedconf.cvmfs.json
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas   1618536 Apr 19 09:33 agis_ddmendpoints.agis.ALL.json
[2025-04-19 10:58:53] drwx------ 4 boincer umatlas      4096 Apr 19 09:33 pilot3
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas      5867 Apr 19 10:55 init_data.xml
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas        95 Apr 19 10:57 pilot_heartbeat.json
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas 198277268 Apr 19 10:57 HITS.44075483._081562.pool.root.1
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas       529 Apr 19 10:58 boinc_task_state.xml
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas      1049 Apr 19 10:58 memory_monitor_summary.json
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas    379676 Apr 19 10:58 log.44075483._081562.job.log.tgz.1
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas      7754 Apr 19 10:58 heartbeat.json
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas        27 Apr 19 10:58 wrapper_checkpoint.txt
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 10:58 boinc_mmap_file
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas      4353 Apr 19 10:58 pilotlog.txt
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas    481359 Apr 19 10:58 log.44075483._081562.job.log.1
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas       357 Apr 19 10:58 output.list
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas       620 Apr 19 10:58 runtime_log
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas    880640 Apr 19 10:58 result.tar.gz
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 10:58 runtime_log.err
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas       658 Apr 19 10:58 6SnMDmKkKQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrhhLDmT46Y8m.diag
[2025-04-19 10:58:53] -rw-r--r-- 1 boincer umatlas     21288 Apr 19 10:58 stderr.txt
[2025-04-19 10:58:53] HITS file was successfully produced:
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas 198277268 Apr 19 10:57 shared/HITS.pool.root.1
[2025-04-19 10:58:53]  *** Contents of shared directory: ***
[2025-04-19 10:58:53] total 414072
[2025-04-19 10:58:53] -rw-r--r-- 2 boincer umatlas 224312529 Apr 19 09:33 ATLAS.root_0
[2025-04-19 10:58:53] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:33 start_atlas.sh
[2025-04-19 10:58:53] -rw-r--r-- 2 boincer umatlas    508885 Apr 19 09:33 input.tar.gz
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas 198277268 Apr 19 10:57 HITS.pool.root.1
[2025-04-19 10:58:53] -rw------- 1 boincer umatlas    880640 Apr 19 10:58 result.tar.gz
10:58:55 (17933): run_atlas exited; CPU time 47410.884542
10:58:55 (17933): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN