Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:14:53 (35860): wrapper (7.7.26015): starting
09:14:53 (35860): wrapper: running run_atlas (--nthreads 10)
[2025-04-19 09:14:53] Arguments: --nthreads 10
[2025-04-19 09:14:53] Threads: 10
[2025-04-19 09:14:53] Checking for CVMFS
[2025-04-19 09:14:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 09:14:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 09:14:55] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 09:15:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 09:15:00] 2.11.2.0 1570 42649 231448 145039 3 14 14076613 18432000 14619 130560 0 167823598 98.887 425451650 35867 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 09:15:00] CVMFS is ok
[2025-04-19 09:15:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 09:15:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 09:15:00] Further information can be found at the LHC@home message board.
[2025-04-19 09:15:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 09:15:00] Checking for apptainer binary...
[2025-04-19 09:15:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 09:15:00] Running /usr/bin/apptainer --version
[2025-04-19 09:15:01] apptainer version 1.3.2-1.el7
[2025-04-19 09:15:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 09:15:53] c-210-9.aglt2.org
[2025-04-19 09:15:53] apptainer works
[2025-04-19 09:15:53] Set ATHENA_PROC_NUMBER=10
[2025-04-19 09:15:53] Set ATHENA_CORE_NUMBER=10
[2025-04-19 09:15:53] Starting ATLAS job with PandaID=6607712844
[2025-04-19 09:15:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 06:23:12]  *** The last 200 lines of the pilot log: ***
[2025-04-20 06:23:12] 2025-04-20 10:22:29,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 06:23:12] 2025-04-20 10:22:32,050 | INFO     | monitor loop #3368: job 0:6607712844 is in state 'finished'
[2025-04-20 06:23:12] 2025-04-20 10:22:32,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 06:23:12] 2025-04-20 10:22:34,581 | INFO     | monitor loop #3369: job 0:6607712844 is in state 'finished'
[2025-04-20 06:23:12] 2025-04-20 10:22:34,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 06:23:12] 2025-04-20 10:22:37,090 | INFO     | monitor loop #3370: job 0:6607712844 is in state 'finished'
[2025-04-20 06:23:12] 2025-04-20 10:22:37,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 06:23:12] 2025-04-20 10:22:37,255 | INFO     | 75770s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-20 06:23:12] 2025-04-20 10:22:39,615 | INFO     | monitor loop #3371: job 0:6607712844 is in state 'finished'
[2025-04-20 06:23:12] 2025-04-20 10:22:39,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 06:23:12] 2025-04-20 10:22:40,686 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 06:23:12] 2025-04-20 10:22:40,686 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6607712844/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 06:23:12] 2025-04-20 10:22:40,687 | INFO     | extracted standard info from prmon json
[2025-04-20 06:23:12] 2025-04-20 10:22:40,687 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 06:23:12] 2025-04-20 10:22:40,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 06:23:12] 2025-04-20 10:22:40,717 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 06:23:12] 2025-04-20 10:22:40,717 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 06:23:12] 2025-04-20 10:22:41,005 | INFO     | fitting pss+swap vs Time
[2025-04-20 06:23:12] 2025-04-20 10:22:41,057 | INFO     | sum of square deviations: 577020754357.8503
[2025-04-20 06:23:12] 2025-04-20 10:22:41,369 | INFO     | sum of deviations: 3116048269418.2676
[2025-04-20 06:23:12] 2025-04-20 10:22:41,369 | INFO     | mean x: 1745106924.7788618
[2025-04-20 06:23:12] 2025-04-20 10:22:41,369 | INFO     | mean y: 2493532.9642276424
[2025-04-20 06:23:12] 2025-04-20 10:22:41,383 | INFO     | -- intersect: -9421495763.50158
[2025-04-20 06:23:12] 2025-04-20 10:22:41,383 | INFO     | intersect: -9421495763.50158
[2025-04-20 06:23:12] 2025-04-20 10:22:41,385 | INFO     | chi2: 24.299550045175742
[2025-04-20 06:23:12] 2025-04-20 10:22:41,452 | INFO     | sum of square deviations: 570012851182.7068
[2025-04-20 06:23:12] 2025-04-20 10:22:41,595 | INFO     | sum of deviations: 3447297526497.903
[2025-04-20 06:23:12] 2025-04-20 10:22:41,596 | INFO     | mean x: 1745106772.2832654
[2025-04-20 06:23:12] 2025-04-20 10:22:41,596 | INFO     | mean y: 2500735.253877551
[2025-04-20 06:23:12] 2025-04-20 10:22:41,596 | INFO     | -- intersect: -10551475805.949677
[2025-04-20 06:23:12] 2025-04-20 10:22:41,596 | INFO     | intersect: -10551475805.949677
[2025-04-20 06:23:12] 2025-04-20 10:22:41,618 | INFO     | chi2: 21.17911448776526
[2025-04-20 06:23:12] 2025-04-20 10:22:41,618 | INFO     | current chi2=21.17911448776526 (change=12.841536372522214 %)
[2025-04-20 06:23:12] 2025-04-20 10:22:41,618 | INFO     | right removable region: 1224
[2025-04-20 06:23:12] 2025-04-20 10:22:41,620 | INFO     | sum of square deviations: 570011966437.14
[2025-04-20 06:23:12] 2025-04-20 10:22:41,960 | INFO     | sum of deviations: 2656189168822.0854
[2025-04-20 06:23:12] 2025-04-20 10:22:41,960 | INFO     | mean x: 1745107077.2840817
[2025-04-20 06:23:12] 2025-04-20 10:22:41,960 | INFO     | mean y: 2503538.758367347
[2025-04-20 06:23:12] 2025-04-20 10:22:41,960 | INFO     | -- intersect: -8129491559.677729
[2025-04-20 06:23:12] 2025-04-20 10:22:41,977 | INFO     | intersect: -8129491559.677729
[2025-04-20 06:23:12] 2025-04-20 10:22:41,979 | INFO     | chi2: 19.05678555434749
[2025-04-20 06:23:12] 2025-04-20 10:22:41,979 | INFO     | current chi2=19.05678555434749 (change=21.57556202103057 %)
[2025-04-20 06:23:12] 2025-04-20 10:22:41,979 | INFO     | left removable region: 10
[2025-04-20 06:23:12] 2025-04-20 10:22:41,994 | INFO     | sum of square deviations: 554793870550.5159
[2025-04-20 06:23:12] 2025-04-20 10:22:42,171 | INFO     | monitor loop #3372: job 0:6607712844 is in state 'finished'
[2025-04-20 06:23:12] 2025-04-20 10:22:42,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 06:23:12] 2025-04-20 10:22:42,231 | INFO     | sum of deviations: 2588936147174.8364
[2025-04-20 06:23:12] 2025-04-20 10:22:42,231 | INFO     | mean x: 1745107046.7940693
[2025-04-20 06:23:12] 2025-04-20 10:22:42,231 | INFO     | mean y: 2519536.6993410215
[2025-04-20 06:23:12] 2025-04-20 10:22:42,231 | INFO     | -- intersect: -8140992772.929391
[2025-04-20 06:23:12] 2025-04-20 10:22:42,231 | INFO     | intersect: -8140992772.929391
[2025-04-20 06:23:12] 2025-04-20 10:22:42,238 | INFO     | chi2: 12.081706143348528
[2025-04-20 06:23:12] 2025-04-20 10:22:42,238 | INFO     | -- intersect: -8140992772.929391
[2025-04-20 06:23:12] 2025-04-20 10:22:42,238 | INFO     | current memory leak: 4.67 B/s (using 1214 data points, chi2=12.08)
[2025-04-20 06:23:12] 2025-04-20 10:22:42,242 | INFO     | ..............................
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | . Timing measurements:
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | . get job = 0 s
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | . initial setup = 21 s
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | . payload setup = 200 s
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | . stage-in = 3 s
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | . payload execution = 75206 s
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | . stage-out = 15 s
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | . log creation = 4 s
[2025-04-20 06:23:12] 2025-04-20 10:22:42,243 | INFO     | ..............................
[2025-04-20 06:23:12] 2025-04-20 10:22:44,306 | INFO     | 
[2025-04-20 06:23:12] 2025-04-20 10:22:44,306 | INFO     | job summary report
[2025-04-20 06:23:12] 2025-04-20 10:22:44,306 | INFO     | --------------------------------------------------
[2025-04-20 06:23:12] 2025-04-20 10:22:44,306 | INFO     | PanDA job id: 6607712844
[2025-04-20 06:23:12] 2025-04-20 10:22:44,306 | INFO     | task id: 44075483
[2025-04-20 06:23:12] 2025-04-20 10:22:44,306 | INFO     | errors: (none)
[2025-04-20 06:23:12] 2025-04-20 10:22:44,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 06:23:12] 2025-04-20 10:22:44,306 | INFO     | pilot state: finished 
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | transexitcode: 0
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | exeerrorcode: 0
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | exeerrordiag: 
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | exitcode: 0
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | exitmsg: OK
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | cpuconsumptiontime: 58443 s
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | nevents: 400
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | neventsw: 0
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | pid: 14575
[2025-04-20 06:23:12] 2025-04-20 10:22:44,307 | INFO     | pgrp: 14575
[2025-04-20 06:23:12] 2025-04-20 10:22:44,308 | INFO     | corecount: 10
[2025-04-20 06:23:12] 2025-04-20 10:22:44,308 | INFO     | event service: False
[2025-04-20 06:23:12] 2025-04-20 10:22:44,308 | INFO     | sizes: {0: 2425996, 1: 2426597, 2: 2426709, 3: 2426737, 5: 2426737, 6: 2426936, 18: 2427092, 30: 2427120, 42: 2427148, 54: 2427204, 66: 2427232, 78: 2427540, 90: 2
[2025-04-20 06:23:12] 2025-04-20 10:22:44,308 | INFO     | --------------------------------------------------
[2025-04-20 06:23:12] 2025-04-20 10:22:44,308 | INFO     | 
[2025-04-20 06:23:12] 2025-04-20 10:22:44,308 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-20 06:23:12] 2025-04-20 10:22:45,357 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,372 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,372 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,372 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 06:23:12] 2025-04-20 10:22:45,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 06:23:12] 2025-04-20 10:22:45,416 | INFO     | job 6607712844 has completed (purged errors)
[2025-04-20 06:23:12] 2025-04-20 10:22:45,416 | INFO     | overall cleanup function is called
[2025-04-20 06:23:12] 2025-04-20 10:22:46,498 | INFO     | --- collectZombieJob: --- 10, [14575]
[2025-04-20 06:23:12] 2025-04-20 10:22:46,498 | INFO     | zombie collector waiting for pid 14575
[2025-04-20 06:23:12] 2025-04-20 10:22:46,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 06:23:12] 2025-04-20 10:22:46,498 | INFO     | collected zombie processes
[2025-04-20 06:23:12] 2025-04-20 10:22:46,498 | INFO     | will attempt to kill all subprocesses of pid=14575
[2025-04-20 06:23:12] 2025-04-20 10:22:50,857 | INFO     | PID=25264 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-20 06:23:12] 2025-04-20 10:22:50,857 | INFO     | .. there are 41 such processes running
[2025-04-20 06:23:12] 2025-04-20 10:22:51,113 | INFO     | process IDs to be killed: [14575] (in reverse order)
[2025-04-20 06:23:12] 2025-04-20 10:22:52,143 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 06:23:12] 2025-04-20 10:22:52,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 06:23:12] 2025-04-20 10:22:52,237 | INFO     | did not find any defunct processes belonging to 14575
[2025-04-20 06:23:12] 2025-04-20 10:22:52,304 | INFO     | did not find any defunct processes belonging to 14575
[2025-04-20 06:23:12] 2025-04-20 10:22:52,304 | INFO     | ready for new job
[2025-04-20 06:23:12] 2025-04-20 10:22:52,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 06:23:12] 2025-04-20 10:22:52,531 | INFO     | **************************************
[2025-04-20 06:23:12] 2025-04-20 10:22:52,531 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 06:23:12] 2025-04-20 10:22:52,531 | INFO     | **************************************
[2025-04-20 06:23:12] 2025-04-20 10:22:52,531 | INFO     | 
[2025-04-20 06:23:12] 2025-04-20 10:22:52,633 | INFO     | architecture information:
[2025-04-20 06:23:12] 2025-04-20 10:22:52,691 | INFO     | executing command: cat /etc/os-release
[2025-04-20 06:23:12] 2025-04-20 10:22:53,091 | INFO     | cat /etc/os-release:
[2025-04-20 06:23:12] NAME="CentOS Linux"
[2025-04-20 06:23:12] VERSION="7 (Core)"
[2025-04-20 06:23:12] ID="centos"
[2025-04-20 06:23:12] ID_LIKE="rhel fedora"
[2025-04-20 06:23:12] VERSION_ID="7"
[2025-04-20 06:23:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 06:23:12] ANSI_COLOR="0;31"
[2025-04-20 06:23:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 06:23:12] HOME_URL="https://www.centos.org/"
[2025-04-20 06:23:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 06:23:12] 
[2025-04-20 06:23:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 06:23:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 06:23:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 06:23:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 06:23:12] 
[2025-04-20 06:23:12] 2025-04-20 10:22:53,136 | INFO     | **************************************
[2025-04-20 06:23:12] 2025-04-20 10:22:53,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-20 06:23:12] 2025-04-20 10:22:54,468 | INFO     | sufficient remaining disk space (57123274752 B)
[2025-04-20 06:23:12] 2025-04-20 10:22:54,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 06:23:12] 2025-04-20 10:22:54,469 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 06:23:12] 2025-04-20 10:22:54,469 | INFO     | update_server=False
[2025-04-20 06:23:12] 2025-04-20 10:22:54,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 06:23:12] 2025-04-20 10:22:54,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 06:23:12] 2025-04-20 10:22:54,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 06:23:12] 2025-04-20 10:22:54,788 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-20 06:23:12] 2025-04-20 10:22:54,788 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-20 06:23:12] 2025-04-20 10:22:54,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 06:23:12] 2025-04-20 10:22:54,788 | INFO     | will abort loop
[2025-04-20 06:23:12] 2025-04-20 10:22:54,926 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 06:23:12] 2025-04-20 10:22:54,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 06:23:12] 2025-04-20 10:22:54,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 06:23:12] 2025-04-20 10:22:55,181 | INFO     | all data control threads have been joined
[2025-04-20 06:23:12] 2025-04-20 10:22:55,475 | INFO     | [job] retrieve thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:55,483 | INFO     | [job] queue monitor thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:55,631 | INFO     | [payload] failed_post thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:55,643 | INFO     | [payload] validate_post thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:55,794 | INFO     | [job] job monitor thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:55,803 | INFO     | all payload control threads have been joined
[2025-04-20 06:23:12] 2025-04-20 10:22:55,808 | INFO     | all job control threads have been joined
[2025-04-20 06:23:12] 2025-04-20 10:22:55,869 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,023 | INFO     | [data] copytool_in thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,035 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,187 | INFO     | [data] control thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,484 | INFO     | [data] copytool_out thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 06:23:12] 2025-04-20 10:22:56,810 | INFO     | [payload] control thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,818 | INFO     | [job] control thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,941 | INFO     | [job] validate thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,947 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:22:56,955 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:23:00,806 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 06:23:12] 2025-04-20 10:23:01,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873836705600)>', '<ExcThread(monitor, started 139873243617024)>']
[2025-04-20 06:23:12] 2025-04-20 10:23:02,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 06:23:12] 2025-04-20 10:23:02,014 | INFO     | [monitor] control thread has ended
[2025-04-20 06:23:12] 2025-04-20 10:23:06,032 | INFO     | all workflow threads have been joined
[2025-04-20 06:23:12] 2025-04-20 10:23:06,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 06:23:12] 2025-04-20 10:23:06,032 | INFO     | traces error code: 0
[2025-04-20 06:23:12] 2025-04-20 10:23:06,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 06:23:12] 2025-04-20 10:23:07,538 [wrapper] ==== pilot stdout END ====
[2025-04-20 06:23:12] 2025-04-20 10:23:07,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 06:23:12] 2025-04-20 10:23:07,643 [wrapper] pilotpid: 25264
[2025-04-20 06:23:12] 2025-04-20 10:23:07,800 [wrapper] Pilot exit status: 0
[2025-04-20 06:23:12] 2025-04-20 10:23:08,247 [wrapper] pandaids: 6607712844
[2025-04-20 06:23:12] 2025-04-20 10:23:10,285 [wrapper] cleanup supervisor_pilot 12817 25265
[2025-04-20 06:23:12] 2025-04-20 10:23:10,338 [wrapper] Test setup, not cleaning
[2025-04-20 06:23:12] 2025-04-20 10:23:10,394 [wrapper] apfmon messages muted
[2025-04-20 06:23:12] 2025-04-20 10:23:10,446 [wrapper] ==== wrapper stdout END ====
[2025-04-20 06:23:12] 2025-04-20 10:23:10,495 [wrapper] ==== wrapper stderr END ====
[2025-04-20 06:23:12]  *** Error codes and diagnostics ***
[2025-04-20 06:23:12]     "exeErrorCode": 0,
[2025-04-20 06:23:12]     "exeErrorDiag": "",
[2025-04-20 06:23:12]     "pilotErrorCode": 0,
[2025-04-20 06:23:12]     "pilotErrorDiag": "",
[2025-04-20 06:23:12]  *** Listing of results directory ***
[2025-04-20 06:23:12] total 428252
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 06:20 pilot3.tar.gz
[2025-04-20 06:23:12] -rwx------ 1 boincer umatlas     37140 Apr 19 06:30 runpilot2-wrapper.sh
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 06:30 queuedata.json
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas       100 Apr 19 09:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 06:23:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 09:14 run_atlas
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas       105 Apr 19 09:14 job.xml
[2025-04-20 06:23:12] -rw-r--r-- 2 boincer umatlas 224864521 Apr 19 09:14 EVNT.44075481._003158.pool.root.1
[2025-04-20 06:23:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:14 start_atlas.sh
[2025-04-20 06:23:12] drwxrwx--x 2 boincer umatlas      4096 Apr 19 09:14 shared
[2025-04-20 06:23:12] -rw-r--r-- 2 boincer umatlas    508890 Apr 19 09:14 input.tar.gz
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas         0 Apr 19 09:14 boinc_lockfile
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 09:15 pandaJob.out
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas       467 Apr 19 09:16 setup.sh.local
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas    991292 Apr 19 09:19 agis_schedconf.cvmfs.json
[2025-04-20 06:23:12] drwx------ 4 boincer umatlas      4096 Apr 19 09:20 pilot3
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas 198449770 Apr 20 06:16 HITS.44075483._081470.pool.root.1
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas       531 Apr 20 06:17 boinc_task_state.xml
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas      1058 Apr 20 06:20 memory_monitor_summary.json
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas   1618536 Apr 20 06:20 agis_ddmendpoints.agis.ALL.json
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas    861626 Apr 20 06:20 log.44075483._081470.job.log.tgz.1
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas      6227 Apr 20 06:21 init_data.xml
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas        95 Apr 20 06:22 pilot_heartbeat.json
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas      7763 Apr 20 06:22 heartbeat.json
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas      8192 Apr 20 06:23 boinc_mmap_file
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas        28 Apr 20 06:23 wrapper_checkpoint.txt
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas      4539 Apr 20 06:23 pilotlog.txt
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas   4815888 Apr 20 06:23 log.44075483._081470.job.log.1
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas       357 Apr 20 06:23 output.list
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas       620 Apr 20 06:23 runtime_log
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas   5693440 Apr 20 06:23 result.tar.gz
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas     11416 Apr 20 06:23 runtime_log.err
[2025-04-20 06:23:12] -rw------- 1 boincer umatlas       663 Apr 20 06:23 cJVMDm7dKQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmyP6KDmQzGPYm.diag
[2025-04-20 06:23:12] -rw-r--r-- 1 boincer umatlas     21525 Apr 20 06:23 stderr.txt
[2025-04-20 06:23:13] HITS file was successfully produced:
[2025-04-20 06:23:13] -rw------- 1 boincer umatlas 198449770 Apr 20 06:16 shared/HITS.pool.root.1
[2025-04-20 06:23:13]  *** Contents of shared directory: ***
[2025-04-20 06:23:13] total 419480
[2025-04-20 06:23:13] -rw-r--r-- 2 boincer umatlas 224864521 Apr 19 09:14 ATLAS.root_0
[2025-04-20 06:23:13] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:14 start_atlas.sh
[2025-04-20 06:23:13] -rw-r--r-- 2 boincer umatlas    508890 Apr 19 09:14 input.tar.gz
[2025-04-20 06:23:13] -rw------- 1 boincer umatlas 198449770 Apr 20 06:16 HITS.pool.root.1
[2025-04-20 06:23:13] -rw------- 1 boincer umatlas   5693440 Apr 20 06:23 result.tar.gz
06:23:14 (35860): run_atlas exited; CPU time 61151.520537
06:23:14 (35860): called boinc_finish(0)

</stderr_txt>
]]>

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