Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:15:00 (27643): wrapper (7.7.26015): starting
09:15:00 (27643): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 09:15:00] Arguments: --nthreads 12
[2025-04-19 09:15:00] Threads: 12
[2025-04-19 09:15:00] Checking for CVMFS
[2025-04-19 09:15:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 09:15:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 09:15:02] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 09:15:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 09:15:05] 2.11.2.0 30600 50826 132076 145038 0 308 10505422 18432000 6164 130560 0 94535923 98.759 261699358 30689 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 09:15:05] CVMFS is ok
[2025-04-19 09:15:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 09:15:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 09:15:05] Further information can be found at the LHC@home message board.
[2025-04-19 09:15:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 09:15:05] Checking for apptainer binary...
[2025-04-19 09:15:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 09:15:05] Running /usr/bin/apptainer --version
[2025-04-19 09:15:07] apptainer version 1.3.2-1.el7
[2025-04-19 09:15:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 09:15:24] c-206-8.aglt2.org
[2025-04-19 09:15:24] apptainer works
[2025-04-19 09:15:24] Set ATHENA_PROC_NUMBER=12
[2025-04-19 09:15:24] Set ATHENA_CORE_NUMBER=12
[2025-04-19 09:15:24] Starting ATLAS job with PandaID=6607712845
[2025-04-19 09:15:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 21:58:40]  *** The last 200 lines of the pilot log: ***
[2025-04-19 21:58:40] 2025-04-20 01:58:22,459 | INFO     | mean y: 2597496.751014885
[2025-04-19 21:58:40] 2025-04-20 01:58:22,459 | INFO     | -- intersect: -14259331381.26992
[2025-04-19 21:58:40] 2025-04-20 01:58:22,459 | INFO     | intersect: -14259331381.26992
[2025-04-19 21:58:40] 2025-04-20 01:58:22,460 | INFO     | chi2: 9.012326238317993
[2025-04-19 21:58:40] 2025-04-20 01:58:22,461 | INFO     | current chi2=9.012326238317993 (change=15.289395916093873 %)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,461 | INFO     | right removable region: 738
[2025-04-19 21:58:40] 2025-04-20 01:58:22,462 | INFO     | sum of square deviations: 125137397381.2205
[2025-04-19 21:58:40] 2025-04-20 01:58:22,480 | INFO     | sum of deviations: 661195677436.6108
[2025-04-19 21:58:40] 2025-04-20 01:58:22,481 | INFO     | mean x: 1745091738.0324764
[2025-04-19 21:58:40] 2025-04-20 01:58:22,481 | INFO     | mean y: 2606968.0162381595
[2025-04-19 21:58:40] 2025-04-20 01:58:22,481 | INFO     | -- intersect: -9218034807.058548
[2025-04-19 21:58:40] 2025-04-20 01:58:22,481 | INFO     | intersect: -9218034807.058548
[2025-04-19 21:58:40] 2025-04-20 01:58:22,483 | INFO     | chi2: 6.502922306795746
[2025-04-19 21:58:40] 2025-04-20 01:58:22,483 | INFO     | current chi2=6.502922306795746 (change=38.87632755933318 %)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,484 | INFO     | sum of square deviations: 122614258922.5069
[2025-04-19 21:58:40] 2025-04-20 01:58:22,503 | INFO     | sum of deviations: 478442914040.4026
[2025-04-19 21:58:40] 2025-04-20 01:58:22,503 | INFO     | mean x: 1745091890.5367846
[2025-04-19 21:58:40] 2025-04-20 01:58:22,504 | INFO     | mean y: 2618012.0776566756
[2025-04-19 21:58:40] 2025-04-20 01:58:22,504 | INFO     | -- intersect: -6806760087.28658
[2025-04-19 21:58:40] 2025-04-20 01:58:22,504 | INFO     | intersect: -6806760087.28658
[2025-04-19 21:58:40] 2025-04-20 01:58:22,505 | INFO     | chi2: 4.571801638031696
[2025-04-19 21:58:40] 2025-04-20 01:58:22,506 | INFO     | current chi2=4.571801638031696 (change=29.696197765518008 %)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,507 | INFO     | sum of square deviations: 120125305291.84616
[2025-04-19 21:58:40] 2025-04-20 01:58:22,525 | INFO     | sum of deviations: 323778587938.58026
[2025-04-19 21:58:40] 2025-04-20 01:58:22,525 | INFO     | mean x: 1745092043.0397806
[2025-04-19 21:58:40] 2025-04-20 01:58:22,525 | INFO     | mean y: 2627487.87654321
[2025-04-19 21:58:40] 2025-04-20 01:58:22,526 | INFO     | -- intersect: -4700989590.519551
[2025-04-19 21:58:40] 2025-04-20 01:58:22,526 | INFO     | intersect: -4700989590.519551
[2025-04-19 21:58:40] 2025-04-20 01:58:22,527 | INFO     | chi2: 3.2130316801129184
[2025-04-19 21:58:40] 2025-04-20 01:58:22,527 | INFO     | current chi2=3.2130316801129184 (change=29.72066737575628 %)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,529 | INFO     | sum of square deviations: 117670214315.58543
[2025-04-19 21:58:40] 2025-04-20 01:58:22,546 | INFO     | sum of deviations: 186805702392.69885
[2025-04-19 21:58:40] 2025-04-20 01:58:22,547 | INFO     | mean x: 1745092195.544199
[2025-04-19 21:58:40] 2025-04-20 01:58:22,547 | INFO     | mean y: 2635992.3687845306
[2025-04-19 21:58:40] 2025-04-20 01:58:22,547 | INFO     | -- intersect: -2767760706.7852955
[2025-04-19 21:58:40] 2025-04-20 01:58:22,547 | INFO     | intersect: -2767760706.7852955
[2025-04-19 21:58:40] 2025-04-20 01:58:22,548 | INFO     | chi2: 2.1301597977726137
[2025-04-19 21:58:40] 2025-04-20 01:58:22,549 | INFO     | current chi2=2.1301597977726137 (change=33.70249627611043 %)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,550 | INFO     | sum of square deviations: 115248754468.19754
[2025-04-19 21:58:40] 2025-04-20 01:58:22,568 | INFO     | sum of deviations: 119969162585.79575
[2025-04-19 21:58:40] 2025-04-20 01:58:22,568 | INFO     | mean x: 1745092348.0500696
[2025-04-19 21:58:40] 2025-04-20 01:58:22,568 | INFO     | mean y: 2640200.0890125176
[2025-04-19 21:58:40] 2025-04-20 01:58:22,568 | INFO     | -- intersect: -1813928391.8797464
[2025-04-19 21:58:40] 2025-04-20 01:58:22,569 | INFO     | intersect: -1813928391.8797464
[2025-04-19 21:58:40] 2025-04-20 01:58:22,570 | INFO     | chi2: 1.8873064630724565
[2025-04-19 21:58:40] 2025-04-20 01:58:22,570 | INFO     | current chi2=1.8873064630724565 (change=11.400709700469184 %)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,570 | INFO     | left removable region: 50
[2025-04-19 21:58:40] 2025-04-20 01:58:22,571 | INFO     | sum of square deviations: 100974326583.43587
[2025-04-19 21:58:40] 2025-04-20 01:58:22,589 | INFO     | sum of deviations: 124749568504.30812
[2025-04-19 21:58:40] 2025-04-20 01:58:22,590 | INFO     | mean x: 1745092927.5610466
[2025-04-19 21:58:40] 2025-04-20 01:58:22,590 | INFO     | mean y: 2653188.1831395347
[2025-04-19 21:58:40] 2025-04-20 01:58:22,590 | INFO     | -- intersect: -2153336329.937326
[2025-04-19 21:58:40] 2025-04-20 01:58:22,590 | INFO     | intersect: -2153336329.937326
[2025-04-19 21:58:40] 2025-04-20 01:58:22,591 | INFO     | chi2: 0.018526012831962757
[2025-04-19 21:58:40] 2025-04-20 01:58:22,592 | INFO     | -- intersect: -2153336329.937326
[2025-04-19 21:58:40] 2025-04-20 01:58:22,592 | INFO     | current memory leak: 1.24 B/s (using 688 data points, chi2=0.02)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,593 | INFO     | ..............................
[2025-04-19 21:58:40] 2025-04-20 01:58:22,593 | INFO     | . Timing measurements:
[2025-04-19 21:58:40] 2025-04-20 01:58:22,593 | INFO     | . get job = 0 s
[2025-04-19 21:58:40] 2025-04-20 01:58:22,594 | INFO     | . initial setup = 6 s
[2025-04-19 21:58:40] 2025-04-20 01:58:22,594 | INFO     | . payload setup = 94 s
[2025-04-19 21:58:40] 2025-04-20 01:58:22,594 | INFO     | . stage-in = 0 s
[2025-04-19 21:58:40] 2025-04-20 01:58:22,594 | INFO     | . payload execution = 45464 s
[2025-04-19 21:58:40] 2025-04-20 01:58:22,594 | INFO     | . stage-out = 3 s
[2025-04-19 21:58:40] 2025-04-20 01:58:22,594 | INFO     | . log creation = 0 s
[2025-04-19 21:58:40] 2025-04-20 01:58:22,595 | INFO     | ..............................
[2025-04-19 21:58:40] 2025-04-20 01:58:22,753 | INFO     | 
[2025-04-19 21:58:40] 2025-04-20 01:58:22,760 | INFO     | job summary report
[2025-04-19 21:58:40] 2025-04-20 01:58:22,760 | INFO     | --------------------------------------------------
[2025-04-19 21:58:40] 2025-04-20 01:58:22,761 | INFO     | PanDA job id: 6607712845
[2025-04-19 21:58:40] 2025-04-20 01:58:22,761 | INFO     | task id: 44075483
[2025-04-19 21:58:40] 2025-04-20 01:58:22,761 | INFO     | errors: (none)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,761 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 21:58:40] 2025-04-20 01:58:22,762 | INFO     | pilot state: finished 
[2025-04-19 21:58:40] 2025-04-20 01:58:22,762 | INFO     | transexitcode: 0
[2025-04-19 21:58:40] 2025-04-20 01:58:22,762 | INFO     | exeerrorcode: 0
[2025-04-19 21:58:40] 2025-04-20 01:58:22,762 | INFO     | exeerrordiag: 
[2025-04-19 21:58:40] 2025-04-20 01:58:22,762 | INFO     | exitcode: 0
[2025-04-19 21:58:40] 2025-04-20 01:58:22,762 | INFO     | exitmsg: OK
[2025-04-19 21:58:40] 2025-04-20 01:58:22,763 | INFO     | cpuconsumptiontime: 101063 s
[2025-04-19 21:58:40] 2025-04-20 01:58:22,763 | INFO     | nevents: 400
[2025-04-19 21:58:40] 2025-04-20 01:58:22,763 | INFO     | neventsw: 0
[2025-04-19 21:58:40] 2025-04-20 01:58:22,763 | INFO     | pid: 2886
[2025-04-19 21:58:40] 2025-04-20 01:58:22,763 | INFO     | pgrp: 2886
[2025-04-19 21:58:40] 2025-04-20 01:58:22,765 | INFO     | corecount: 12
[2025-04-19 21:58:40] 2025-04-20 01:58:22,765 | INFO     | event service: False
[2025-04-19 21:58:40] 2025-04-20 01:58:22,766 | INFO     | sizes: {0: 2426653, 1: 2426653, 2: 2426852, 3: 2426880, 15: 2426908, 27: 2426936, 38: 2427092, 50: 2427354, 62: 2427354, 45566: 2470733, 45570: 2480010, 45579: 248
[2025-04-19 21:58:40] 2025-04-20 01:58:22,766 | INFO     | --------------------------------------------------
[2025-04-19 21:58:40] 2025-04-20 01:58:22,766 | INFO     | 
[2025-04-19 21:58:40] 2025-04-20 01:58:22,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 21:58:40] 2025-04-20 01:58:22,802 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,802 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,804 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 21:58:40] 2025-04-20 01:58:22,805 | INFO     | job 6607712845 has completed (purged errors)
[2025-04-19 21:58:40] 2025-04-20 01:58:22,805 | INFO     | overall cleanup function is called
[2025-04-19 21:58:40] 2025-04-20 01:58:23,814 | INFO     | --- collectZombieJob: --- 10, [2886]
[2025-04-19 21:58:40] 2025-04-20 01:58:23,814 | INFO     | zombie collector waiting for pid 2886
[2025-04-19 21:58:40] 2025-04-20 01:58:23,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 21:58:40] 2025-04-20 01:58:23,814 | INFO     | collected zombie processes
[2025-04-19 21:58:40] 2025-04-20 01:58:23,815 | INFO     | will attempt to kill all subprocesses of pid=2886
[2025-04-19 21:58:40] 2025-04-20 01:58:24,102 | INFO     | process IDs to be killed: [2886] (in reverse order)
[2025-04-19 21:58:40] 2025-04-20 01:58:24,200 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 21:58:40] 2025-04-20 01:58:24,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 21:58:40] 2025-04-20 01:58:24,211 | INFO     | did not find any defunct processes belonging to 2886
[2025-04-19 21:58:40] 2025-04-20 01:58:24,221 | INFO     | did not find any defunct processes belonging to 2886
[2025-04-19 21:58:40] 2025-04-20 01:58:24,222 | INFO     | ready for new job
[2025-04-19 21:58:40] 2025-04-20 01:58:24,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 21:58:40] 2025-04-20 01:58:24,224 | INFO     | **************************************
[2025-04-19 21:58:40] 2025-04-20 01:58:24,225 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 21:58:40] 2025-04-20 01:58:24,225 | INFO     | **************************************
[2025-04-19 21:58:40] 2025-04-20 01:58:24,225 | INFO     | 
[2025-04-19 21:58:40] 2025-04-20 01:58:24,226 | INFO     | architecture information:
[2025-04-19 21:58:40] 2025-04-20 01:58:24,226 | INFO     | executing command: cat /etc/os-release
[2025-04-19 21:58:40] 2025-04-20 01:58:24,243 | INFO     | cat /etc/os-release:
[2025-04-19 21:58:40] NAME="CentOS Linux"
[2025-04-19 21:58:40] VERSION="7 (Core)"
[2025-04-19 21:58:40] ID="centos"
[2025-04-19 21:58:40] ID_LIKE="rhel fedora"
[2025-04-19 21:58:40] VERSION_ID="7"
[2025-04-19 21:58:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 21:58:40] ANSI_COLOR="0;31"
[2025-04-19 21:58:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 21:58:40] HOME_URL="https://www.centos.org/"
[2025-04-19 21:58:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 21:58:40] 
[2025-04-19 21:58:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 21:58:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 21:58:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 21:58:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 21:58:40] 
[2025-04-19 21:58:40] 2025-04-20 01:58:24,243 | INFO     | **************************************
[2025-04-19 21:58:40] 2025-04-20 01:58:24,746 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 21:58:40] 2025-04-20 01:58:24,763 | INFO     | sufficient remaining disk space (29201793024 B)
[2025-04-19 21:58:40] 2025-04-20 01:58:24,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 21:58:40] 2025-04-20 01:58:24,763 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 21:58:40] 2025-04-20 01:58:24,764 | INFO     | update_server=False
[2025-04-19 21:58:40] 2025-04-20 01:58:24,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 21:58:40] 2025-04-20 01:58:24,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 21:58:40] 2025-04-20 01:58:24,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 21:58:40] 2025-04-20 01:58:24,871 | INFO     | all payload control threads have been joined
[2025-04-19 21:58:40] 2025-04-20 01:58:25,106 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 21:58:40] 2025-04-20 01:58:25,107 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 21:58:40] 2025-04-20 01:58:25,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 21:58:40] 2025-04-20 01:58:25,107 | INFO     | will abort loop
[2025-04-19 21:58:40] 2025-04-20 01:58:25,291 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 21:58:40] 2025-04-20 01:58:25,292 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 21:58:40] 2025-04-20 01:58:25,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 21:58:40] 2025-04-20 01:58:25,316 | INFO     | all job control threads have been joined
[2025-04-19 21:58:40] 2025-04-20 01:58:25,378 | INFO     | all data control threads have been joined
[2025-04-19 21:58:40] 2025-04-20 01:58:25,765 | INFO     | [job] retrieve thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:25,877 | INFO     | [payload] control thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:25,914 | INFO     | [payload] validate_post thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:26,113 | INFO     | [job] job monitor thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:26,318 | INFO     | [job] control thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:26,383 | INFO     | [data] control thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:26,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:26,740 | INFO     | [payload] failed_post thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:26,771 | INFO     | [data] copytool_out thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:27,108 | INFO     | [job] validate thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:27,126 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:27,126 | INFO     | [data] copytool_in thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:27,126 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:27,168 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:27,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 21:58:40] 2025-04-20 01:58:28,769 | INFO     | [job] queue monitor thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:28,772 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 21:58:40] 2025-04-20 01:58:30,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684425660224)>', '<ExcThread(monitor, started 140683834799872)>']
[2025-04-19 21:58:40] 2025-04-20 01:58:31,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 21:58:40] 2025-04-20 01:58:31,325 | INFO     | [monitor] control thread has ended
[2025-04-19 21:58:40] 2025-04-20 01:58:35,883 | INFO     | all workflow threads have been joined
[2025-04-19 21:58:40] 2025-04-20 01:58:35,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 21:58:40] 2025-04-20 01:58:35,895 | INFO     | traces error code: 0
[2025-04-19 21:58:40] 2025-04-20 01:58:35,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 21:58:40] 2025-04-20 01:58:37,940 [wrapper] ==== pilot stdout END ====
[2025-04-19 21:58:40] 2025-04-20 01:58:37,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 21:58:40] 2025-04-20 01:58:37,951 [wrapper] pilotpid: 10130
[2025-04-19 21:58:40] 2025-04-20 01:58:37,954 [wrapper] Pilot exit status: 0
[2025-04-19 21:58:40] 2025-04-20 01:58:38,024 [wrapper] pandaids: 6607712845
[2025-04-19 21:58:40] 2025-04-20 01:58:38,105 [wrapper] cleanup supervisor_pilot 19210 10131
[2025-04-19 21:58:40] 2025-04-20 01:58:38,113 [wrapper] Test setup, not cleaning
[2025-04-19 21:58:40] 2025-04-20 01:58:38,123 [wrapper] apfmon messages muted
[2025-04-19 21:58:40] 2025-04-20 01:58:38,126 [wrapper] ==== wrapper stdout END ====
[2025-04-19 21:58:40] 2025-04-20 01:58:38,132 [wrapper] ==== wrapper stderr END ====
[2025-04-19 21:58:40]  *** Error codes and diagnostics ***
[2025-04-19 21:58:40]     "exeErrorCode": 0,
[2025-04-19 21:58:40]     "exeErrorDiag": "",
[2025-04-19 21:58:40]     "pilotErrorCode": 0,
[2025-04-19 21:58:40]     "pilotErrorDiag": "",
[2025-04-19 21:58:40]  *** Listing of results directory ***
[2025-04-19 21:58:40] total 427960
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 06:20 pilot3.tar.gz
[2025-04-19 21:58:40] -rwx------ 1 boincer umatlas     37140 Apr 19 06:30 runpilot2-wrapper.sh
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 06:30 queuedata.json
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas       100 Apr 19 09:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 21:58:40] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 09:14 run_atlas
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas       105 Apr 19 09:14 job.xml
[2025-04-19 21:58:40] -rw-r--r-- 2 boincer umatlas 224864521 Apr 19 09:15 EVNT.44075481._003158.pool.root.1
[2025-04-19 21:58:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:15 start_atlas.sh
[2025-04-19 21:58:40] drwxrwx--x 2 boincer umatlas      4096 Apr 19 09:15 shared
[2025-04-19 21:58:40] -rw-r--r-- 2 boincer umatlas    508887 Apr 19 09:15 input.tar.gz
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas         0 Apr 19 09:15 boinc_lockfile
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 09:15 pandaJob.out
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas      2072 Apr 19 09:15 stderr.txt
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas       467 Apr 19 09:15 setup.sh.local
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas    991292 Apr 19 09:16 agis_schedconf.cvmfs.json
[2025-04-19 21:58:40] drwx------ 4 boincer umatlas      4096 Apr 19 09:17 pilot3
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas 201451449 Apr 19 21:55 HITS.44075483._081471.pool.root.1
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas       532 Apr 19 21:56 boinc_task_state.xml
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas      5952 Apr 19 21:57 init_data.xml
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas        95 Apr 19 21:58 pilot_heartbeat.json
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas      1071 Apr 19 21:58 memory_monitor_summary.json
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas   1618536 Apr 19 21:58 agis_ddmendpoints.agis.ALL.json
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas    705845 Apr 19 21:58 log.44075483._081471.job.log.tgz.1
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas      7778 Apr 19 21:58 heartbeat.json
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas      4539 Apr 19 21:58 pilotlog.txt
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas        29 Apr 19 21:58 wrapper_checkpoint.txt
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 21:58 boinc_mmap_file
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas   3326549 Apr 19 21:58 log.44075483._081471.job.log.1
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas       357 Apr 19 21:58 output.list
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas       620 Apr 19 21:58 runtime_log
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas   4055040 Apr 19 21:58 result.tar.gz
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas       664 Apr 19 21:58 yuWMDm7dKQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmzP6KDmg3Hlcn.diag
[2025-04-19 21:58:40] -rw-r--r-- 1 boincer umatlas     11416 Apr 19 21:58 runtime_log.err
[2025-04-19 21:58:40] HITS file was successfully produced:
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas 201451449 Apr 19 21:55 shared/HITS.pool.root.1
[2025-04-19 21:58:40]  *** Contents of shared directory: ***
[2025-04-19 21:58:40] total 420812
[2025-04-19 21:58:40] -rw-r--r-- 2 boincer umatlas 224864521 Apr 19 09:15 ATLAS.root_0
[2025-04-19 21:58:40] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:15 start_atlas.sh
[2025-04-19 21:58:40] -rw-r--r-- 2 boincer umatlas    508887 Apr 19 09:15 input.tar.gz
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas 201451449 Apr 19 21:55 HITS.pool.root.1
[2025-04-19 21:58:40] -rw------- 1 boincer umatlas   4055040 Apr 19 21:58 result.tar.gz
21:58:42 (27643): run_atlas exited; CPU time 102305.699120
21:58:42 (27643): called boinc_finish(0)

</stderr_txt>
]]>

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