Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:21:53 (28029): wrapper (7.7.26015): starting
09:21:53 (28029): wrapper: running run_atlas (--nthreads 10)
[2025-04-19 09:21:53] Arguments: --nthreads 10
[2025-04-19 09:21:53] Threads: 10
[2025-04-19 09:21:53] Checking for CVMFS
[2025-04-19 09:21:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 09:21:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 09:21:55] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 09:21:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 09:21:56] 2.11.2.0 18412 41180 132412 145039 3 249 16328987 18432000 7789 130560 0 76588418 98.412 268486990 39457 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 09:21:56] CVMFS is ok
[2025-04-19 09:21:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 09:21:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 09:21:56] Further information can be found at the LHC@home message board.
[2025-04-19 09:21:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 09:21:56] Checking for apptainer binary...
[2025-04-19 09:21:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 09:21:56] Running /usr/bin/apptainer --version
[2025-04-19 09:21:56] apptainer version 1.3.2-1.el7
[2025-04-19 09:21:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 09:22:13] c-210-13.aglt2.org
[2025-04-19 09:22:13] apptainer works
[2025-04-19 09:22:13] Set ATHENA_PROC_NUMBER=10
[2025-04-19 09:22:13] Set ATHENA_CORE_NUMBER=10
[2025-04-19 09:22:13] Starting ATLAS job with PandaID=6607712833
[2025-04-19 09:22:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 10:13:56]  *** The last 200 lines of the pilot log: ***
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | mean x: 1745070631.0270271
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | mean y: 1947322.4864864864
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | -- intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | chi2: 0.5889678730921342
[2025-04-19 10:13:56] 2025-04-19 14:13:40,625 | INFO     | -- intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,625 | INFO     | current memory leak: 990.29 B/s (using 37 data points, chi2=0.59)
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | ..............................
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . Timing measurements:
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . get job = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . initial setup = 5 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . payload setup = 50 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . stage-in = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . payload execution = 2741 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . stage-out = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . log creation = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | ..............................
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-19 10:13:56] 2025-04-19 14:13:40,627 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-6607712833/pilotlog.txt
[2025-04-19 10:13:56] 2025-04-19 14:13:40,645 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-19 10:13:56] - Log from pilotlog.txt -
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | sum of deviations: 15543551741.513515
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | mean x: 1745070631.0270271
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | mean y: 1947322.4864864864
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | -- intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | chi2: 0.5889678730921342
[2025-04-19 10:13:56] 2025-04-19 14:13:40,625 | INFO     | -- intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,625 | INFO     | current memory leak: 990.29 B/s (using 37 data points, chi2=0.59)
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | ..............................
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . Timing measurements:
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . get job = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . initial setup = 5 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . payload setup = 50 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . stage-in = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . payload execution = 2741 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . stage-out = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . log creation = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | ..............................
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-19 10:13:56] 2025-04-19 14:13:40,627 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-6607712833/pilotlog.txt
[2025-04-19 10:13:56] 2025-04-19 14:13:40,645 | WARNING  | 
[2025-04-19 10:13:56] [begin log extracts]
[2025-04-19 10:13:56] - Log from pilotlog.txt -
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | sum of deviations: 15543551741.513515
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | mean x: 1745070631.0270271
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | mean y: 1947322.4864864864
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | -- intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,624 | INFO     | chi2: 0.5889678730921342
[2025-04-19 10:13:56] 2025-04-19 14:13:40,625 | INFO     | -- intersect: -1728129391640.2834
[2025-04-19 10:13:56] 2025-04-19 14:13:40,625 | INFO     | current memory leak: 990.29 B/s (using 37 data points, chi2=0.59)
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | ..............................
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . Timing measurements:
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . get job = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . initial setup = 5 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . payload setup = 50 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . stage-in = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . payload execution = 2741 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . stage-out = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | . log creation = 0 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | ..............................
[2025-04-19 10:13:56] 2025-04-19 14:13:40,626 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-19 10:13:56] 2025-04-19 14:13:40,627 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/1/PanDA_Pilot-6607712833/pilotlog.txt
[2025-04-19 10:13:56] [end log extracts]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,646 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-04-19 10:13:56] 2025-04-19 14:13:40,647 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-04-19 10:13:56] 2025-04-19 14:13:40,763 | INFO     | 
[2025-04-19 10:13:56] 2025-04-19 14:13:40,763 | INFO     | job summary report
[2025-04-19 10:13:56] 2025-04-19 14:13:40,763 | INFO     | --------------------------------------------------
[2025-04-19 10:13:56] 2025-04-19 14:13:40,763 | INFO     | PanDA job id: 6607712833
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | task id: 44075483
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-04-19 14:11:26,654 CRITICAL Transform executor raised TransformValidationExceptio
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | pilot state: failed 
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | transexitcode: 65
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | exeerrorcode: 65
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | exeerrordiag: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | exitcode: 65
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | exitmsg: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout."
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | cpuconsumptiontime: 2529 s
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | nevents: 0
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | neventsw: 0
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | pid: 31021
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | pgrp: 31021
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | corecount: 10
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | event service: False
[2025-04-19 10:13:56] 2025-04-19 14:13:40,764 | INFO     | sizes: {0: 2426552, 1: 2426751, 12: 2426751, 23: 2426779, 34: 2426807, 36: 2427041, 44: 2427197, 2796: 2454844, 2797: 2459082, 2800: 2459138, 2922: 2459308}
[2025-04-19 10:13:56] 2025-04-19 14:13:40,765 | INFO     | --------------------------------------------------
[2025-04-19 10:13:56] 2025-04-19 14:13:40,765 | INFO     | 
[2025-04-19 10:13:56] 2025-04-19 14:13:40,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 10:13:56] 2025-04-19 14:13:40,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,793 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 10:13:56] 2025-04-19 14:13:40,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,794 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 10:13:56] 2025-04-19 14:13:40,794 | INFO     | job 6607712833 has completed (purged errors)
[2025-04-19 10:13:56] 2025-04-19 14:13:40,794 | INFO     | overall cleanup function is called
[2025-04-19 10:13:56] 2025-04-19 14:13:41,801 | INFO     | --- collectZombieJob: --- 10, [31021]
[2025-04-19 10:13:56] 2025-04-19 14:13:41,807 | INFO     | zombie collector waiting for pid 31021
[2025-04-19 10:13:56] 2025-04-19 14:13:41,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 10:13:56] 2025-04-19 14:13:41,807 | INFO     | collected zombie processes
[2025-04-19 10:13:56] 2025-04-19 14:13:41,807 | INFO     | will attempt to kill all subprocesses of pid=31021
[2025-04-19 10:13:56] 2025-04-19 14:13:42,098 | INFO     | process IDs to be killed: [31021] (in reverse order)
[2025-04-19 10:13:56] 2025-04-19 14:13:42,217 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 10:13:56] 2025-04-19 14:13:42,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 10:13:56] 2025-04-19 14:13:42,226 | INFO     | did not find any defunct processes belonging to 31021
[2025-04-19 10:13:56] 2025-04-19 14:13:42,235 | INFO     | did not find any defunct processes belonging to 31021
[2025-04-19 10:13:56] 2025-04-19 14:13:42,235 | INFO     | ready for new job
[2025-04-19 10:13:56] 2025-04-19 14:13:42,236 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 10:13:56] 2025-04-19 14:13:42,238 | INFO     | **************************************
[2025-04-19 10:13:56] 2025-04-19 14:13:42,238 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 10:13:56] 2025-04-19 14:13:42,238 | INFO     | **************************************
[2025-04-19 10:13:56] 2025-04-19 14:13:42,238 | INFO     | 
[2025-04-19 10:13:56] 2025-04-19 14:13:42,241 | INFO     | architecture information:
[2025-04-19 10:13:56] 2025-04-19 14:13:42,242 | INFO     | executing command: cat /etc/os-release
[2025-04-19 10:13:56] 2025-04-19 14:13:42,272 | INFO     | cat /etc/os-release:
[2025-04-19 10:13:56] NAME="CentOS Linux"
[2025-04-19 10:13:56] VERSION="7 (Core)"
[2025-04-19 10:13:56] ID="centos"
[2025-04-19 10:13:56] ID_LIKE="rhel fedora"
[2025-04-19 10:13:56] VERSION_ID="7"
[2025-04-19 10:13:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 10:13:56] ANSI_COLOR="0;31"
[2025-04-19 10:13:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 10:13:56] HOME_URL="https://www.centos.org/"
[2025-04-19 10:13:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 10:13:56] 
[2025-04-19 10:13:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 10:13:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 10:13:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 10:13:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 10:13:56] 
[2025-04-19 10:13:56] 2025-04-19 14:13:42,272 | INFO     | **************************************
[2025-04-19 10:13:56] 2025-04-19 14:13:42,776 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 10:13:56] 2025-04-19 14:13:42,846 | INFO     | sufficient remaining disk space (56927191040 B)
[2025-04-19 10:13:56] 2025-04-19 14:13:42,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 10:13:56] 2025-04-19 14:13:42,847 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 10:13:56] 2025-04-19 14:13:42,847 | INFO     | update_server=False
[2025-04-19 10:13:56] 2025-04-19 14:13:42,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 10:13:56] 2025-04-19 14:13:42,848 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 10:13:56] 2025-04-19 14:13:42,849 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 10:13:56] 2025-04-19 14:13:42,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 10:13:56] 2025-04-19 14:13:42,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 10:13:56] 2025-04-19 14:13:42,870 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 10:13:56] 2025-04-19 14:13:42,871 | INFO     | aborting loop
[2025-04-19 10:13:56] 2025-04-19 14:13:43,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 10:13:56] 2025-04-19 14:13:43,576 | INFO     | all job control threads have been joined
[2025-04-19 10:13:56] 2025-04-19 14:13:43,764 | INFO     | all payload control threads have been joined
[2025-04-19 10:13:56] 2025-04-19 14:13:43,775 | INFO     | all data control threads have been joined
[2025-04-19 10:13:56] 2025-04-19 14:13:43,851 | INFO     | [job] retrieve thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:43,877 | INFO     | [job] job monitor thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:43,926 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:43,982 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:44,008 | INFO     | [payload] failed_post thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:44,140 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:44,582 | INFO     | [job] control thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:44,649 | INFO     | [data] copytool_in thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:44,655 | INFO     | [payload] validate_post thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:44,769 | INFO     | [payload] control thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:44,781 | INFO     | [data] control thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:44,848 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:45,117 | INFO     | [job] validate thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:45,371 | INFO     | [data] copytool_out thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:45,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 10:13:56] 2025-04-19 14:13:45,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 10:13:56] 2025-04-19 14:13:46,781 | INFO     | [job] queue monitor thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:49,680 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 10:13:56] 2025-04-19 14:13:50,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860648757056)>', '<ExcThread(monitor, started 139860207712000)>']
[2025-04-19 10:13:56] 2025-04-19 14:13:50,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 10:13:56] 2025-04-19 14:13:50,893 | INFO     | [monitor] control thread has ended
[2025-04-19 10:13:56] 2025-04-19 14:13:55,712 | INFO     | all workflow threads have been joined
[2025-04-19 10:13:56] 2025-04-19 14:13:55,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 10:13:56] 2025-04-19 14:13:55,713 | INFO     | traces error code: 0
[2025-04-19 10:13:56] 2025-04-19 14:13:55,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 10:13:56] 2025-04-19 14:13:55,905 [wrapper] ==== pilot stdout END ====
[2025-04-19 10:13:56] 2025-04-19 14:13:55,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 10:13:56] 2025-04-19 14:13:55,910 [wrapper] pilotpid: 3415
[2025-04-19 10:13:56] 2025-04-19 14:13:55,913 [wrapper] Pilot exit status: 0
[2025-04-19 10:13:56] 2025-04-19 14:13:55,976 [wrapper] pandaids: 6607712833
[2025-04-19 10:13:56] 2025-04-19 14:13:56,040 [wrapper] cleanup supervisor_pilot  8886 3416
[2025-04-19 10:13:56] 2025-04-19 14:13:56,044 [wrapper] Test setup, not cleaning
[2025-04-19 10:13:56] 2025-04-19 14:13:56,048 [wrapper] apfmon messages muted
[2025-04-19 10:13:56] 2025-04-19 14:13:56,051 [wrapper] ==== wrapper stdout END ====
[2025-04-19 10:13:56] 2025-04-19 14:13:56,054 [wrapper] ==== wrapper stderr END ====
[2025-04-19 10:13:56]  *** Error codes and diagnostics ***
[2025-04-19 10:13:56]     "exeErrorCode": 65,
[2025-04-19 10:13:56]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2025-04-19 10:13:56]     "pilotErrorCode": 1305,
[2025-04-19 10:13:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2025-04-19 10:13:56]  *** Listing of results directory ***
[2025-04-19 10:13:56] total 224744
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 06:20 pilot3.tar.gz
[2025-04-19 10:13:56] -rwx------ 1 boincer umatlas     37140 Apr 19 06:25 runpilot2-wrapper.sh
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 06:25 queuedata.json
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas       100 Apr 19 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 10:13:56] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 09:21 run_atlas
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas       105 Apr 19 09:21 job.xml
[2025-04-19 10:13:56] -rw-r--r-- 2 boincer umatlas 225047339 Apr 19 09:21 EVNT.44075481._002305.pool.root.1
[2025-04-19 10:13:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:21 start_atlas.sh
[2025-04-19 10:13:56] drwxrwx--x 2 boincer umatlas      4096 Apr 19 09:21 shared
[2025-04-19 10:13:56] -rw-r--r-- 2 boincer umatlas    508895 Apr 19 09:21 input.tar.gz
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas         0 Apr 19 09:21 boinc_lockfile
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 09:22 pandaJob.out
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas       424 Apr 19 09:22 setup.sh.local
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas    991292 Apr 19 09:23 agis_schedconf.cvmfs.json
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas   1618536 Apr 19 09:23 agis_ddmendpoints.agis.ALL.json
[2025-04-19 10:13:56] drwx------ 4 boincer umatlas      4096 Apr 19 09:23 pilot3
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas       528 Apr 19 10:11 boinc_task_state.xml
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas      1058 Apr 19 10:11 memory_monitor_summary.json
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas    305038 Apr 19 10:11 log.44075483._081459.job.log.tgz.1
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas      6142 Apr 19 10:11 init_data.xml
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas        95 Apr 19 10:13 pilot_heartbeat.json
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas      9868 Apr 19 10:13 heartbeat.json
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 10:13 boinc_mmap_file
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas        26 Apr 19 10:13 wrapper_checkpoint.txt
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas      4476 Apr 19 10:13 pilotlog.txt
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas    306112 Apr 19 10:13 log.44075483._081459.job.log.1
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas       188 Apr 19 10:13 output.list
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas       620 Apr 19 10:13 runtime_log
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas    634880 Apr 19 10:13 result.tar.gz
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas     10863 Apr 19 10:13 runtime_log.err
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas       656 Apr 19 10:13 5C8LDmFZKQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmVP6KDmlTIs6m.diag
[2025-04-19 10:13:56] -rw-r--r-- 1 boincer umatlas     21717 Apr 19 10:13 stderr.txt
[2025-04-19 10:13:56] No HITS result produced
[2025-04-19 10:13:56]  *** Contents of shared directory: ***
[2025-04-19 10:13:56] total 220916
[2025-04-19 10:13:56] -rw-r--r-- 2 boincer umatlas 225047339 Apr 19 09:21 ATLAS.root_0
[2025-04-19 10:13:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:21 start_atlas.sh
[2025-04-19 10:13:56] -rw-r--r-- 2 boincer umatlas    508895 Apr 19 09:21 input.tar.gz
[2025-04-19 10:13:56] -rw------- 1 boincer umatlas    634880 Apr 19 10:13 result.tar.gz
10:13:57 (28029): run_atlas exited; CPU time 2582.357488
10:13:57 (28029): called boinc_finish(0)

</stderr_txt>
]]>

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