Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:08 (26346): wrapper (7.7.26015): starting
08:37:08 (26346): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 08:37:08] Arguments: --nthreads 12
[2025-04-19 08:37:08] Threads: 12
[2025-04-19 08:37:08] Checking for CVMFS
[2025-04-19 08:37:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 08:37:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 08:37:08] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 08:37:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 08:37:08] 2.11.2.0 22679 371188 172560 145038 3 58 11100320 20275201 1 130560 0 24619174 99.968 7813940 54252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 08:37:08] CVMFS is ok
[2025-04-19 08:37:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 08:37:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 08:37:08] Further information can be found at the LHC@home message board.
[2025-04-19 08:37:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 08:37:08] Checking for apptainer binary...
[2025-04-19 08:37:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 08:37:08] Running /usr/bin/apptainer --version
[2025-04-19 08:37:08] apptainer version 1.3.2-1.el7
[2025-04-19 08:37:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 08:37:09] c-205-11.aglt2.org
[2025-04-19 08:37:09] apptainer works
[2025-04-19 08:37:09] Set ATHENA_PROC_NUMBER=12
[2025-04-19 08:37:09] Set ATHENA_CORE_NUMBER=12
[2025-04-19 08:37:09] Starting ATLAS job with PandaID=6607611889
[2025-04-19 08:37:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 10:07:12]  *** The last 200 lines of the pilot log: ***
[2025-04-19 10:07:12]  filetype=log
[2025-04-19 10:07:12]  guid=7f568f3e-cf12-439f-9d49-ba17724d3a7c
[2025-04-19 10:07:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 10:07:12]  is_altstaged=None
[2025-04-19 10:07:12]  is_tar=False
[2025-04-19 10:07:12]  lfn=log.44075483._080938.job.log.tgz.1
[2025-04-19 10:07:12]  mtime=0
[2025-04-19 10:07:12]  protocol_id=None
[2025-04-19 10:07:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 10:07:12]  replicas=None
[2025-04-19 10:07:12]  scope=mc23_13p6TeV
[2025-04-19 10:07:12]  status=None
[2025-04-19 10:07:12]  status_code=0
[2025-04-19 10:07:12]  storage_token=
[2025-04-19 10:07:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6607611889/log.44075483._080938.job.log.tgz.1
[2025-04-19 10:07:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/6f/log.44075483._080938.job.log.tgz.1
[2025-04-19 10:07:12]  workdir=None
[2025-04-19 10:07:12] ]
[2025-04-19 10:07:12] 2025-04-19 14:06:55,339 | INFO     | transferring file log.44075483._080938.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607611889/log.44075483._080938.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 10:07:12] 2025-04-19 14:06:55,339 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607611889/log.44075483._080938.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._080938.job
[2025-04-19 10:07:12] 2025-04-19 14:06:55,360 | INFO     | adding to output.list: log.44075483._080938.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/6f/log.44075483._080938.job.log.tg
[2025-04-19 10:07:12] 2025-04-19 14:06:55,361 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 10:07:12] 2025-04-19 14:06:55,362 | INFO     | summary of transferred files:
[2025-04-19 10:07:12] 2025-04-19 14:06:55,362 | INFO     |  -- lfn=log.44075483._080938.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 10:07:12] 2025-04-19 14:06:55,362 | INFO     | stage-out finished correctly
[2025-04-19 10:07:12] 2025-04-19 14:06:55,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 10:07:12] 2025-04-19 14:06:55,535 | INFO     | job 6607611889 has state=finished
[2025-04-19 10:07:12] 2025-04-19 14:06:55,536 | INFO     | preparing for final server update for job 6607611889 in state='finished'
[2025-04-19 10:07:12] 2025-04-19 14:06:55,536 | INFO     | this job has now completed (state=finished)
[2025-04-19 10:07:12] 2025-04-19 14:06:55,536 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 10:07:12] 2025-04-19 14:06:55,537 | INFO     | log transfer has been attempted: DONE
[2025-04-19 10:07:12] 2025-04-19 14:06:55,537 | INFO     | job 6607611889 has finished - writing final server update
[2025-04-19 10:07:12] 2025-04-19 14:06:55,537 | INFO     | total number of processed events: 400 (read)
[2025-04-19 10:07:12] 2025-04-19 14:06:55,539 | INFO     | executing command: lscpu
[2025-04-19 10:07:12] 2025-04-19 14:06:55,566 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 10:07:12] 2025-04-19 14:06:57,013 | WARNING  | process 4117 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 10:07:12] 2025-04-19 14:06:57,013 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607611889/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 10:07:12] 2025-04-19 14:06:57,103 | INFO     | number of running child processes to parent process 4117: 1
[2025-04-19 10:07:12] 2025-04-19 14:06:57,103 | INFO     | maximum number of monitored processes: 6
[2025-04-19 10:07:12] 2025-04-19 14:06:59,606 | INFO     | monitor loop #402: job 0:6607611889 is in state 'finished'
[2025-04-19 10:07:12] 2025-04-19 14:06:59,606 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 10:07:12] 2025-04-19 14:07:00,396 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 10:07:12] 2025-04-19 14:07:00,397 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607611889/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 10:07:12] 2025-04-19 14:07:00,398 | INFO     | extracted standard info from prmon json
[2025-04-19 10:07:12] 2025-04-19 14:07:00,398 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 10:07:12] 2025-04-19 14:07:00,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 10:07:12] 2025-04-19 14:07:00,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 10:07:12] 2025-04-19 14:07:00,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 10:07:12] 2025-04-19 14:07:00,401 | INFO     | fitting pss+swap vs Time
[2025-04-19 10:07:12] 2025-04-19 14:07:00,402 | INFO     | sum of square deviations: 164765880.0
[2025-04-19 10:07:12] 2025-04-19 14:07:00,402 | INFO     | sum of deviations: 20937464930.0
[2025-04-19 10:07:12] 2025-04-19 14:07:00,403 | INFO     | mean x: 1745069017.0
[2025-04-19 10:07:12] 2025-04-19 14:07:00,403 | INFO     | mean y: 2602848.2592592593
[2025-04-19 10:07:12] 2025-04-19 14:07:00,403 | INFO     | -- intersect: -221750355615.39276
[2025-04-19 10:07:12] 2025-04-19 14:07:00,403 | INFO     | intersect: -221750355615.39276
[2025-04-19 10:07:12] 2025-04-19 14:07:00,403 | INFO     | chi2: 2.278561810960547
[2025-04-19 10:07:12] 2025-04-19 14:07:00,404 | INFO     | -- intersect: -221750355615.39276
[2025-04-19 10:07:12] 2025-04-19 14:07:00,404 | INFO     | current memory leak: 127.07 B/s (using 81 data points, chi2=2.28)
[2025-04-19 10:07:12] 2025-04-19 14:07:00,404 | INFO     | ..............................
[2025-04-19 10:07:12] 2025-04-19 14:07:00,405 | INFO     | . Timing measurements:
[2025-04-19 10:07:12] 2025-04-19 14:07:00,405 | INFO     | . get job = 0 s
[2025-04-19 10:07:12] 2025-04-19 14:07:00,405 | INFO     | . initial setup = 2 s
[2025-04-19 10:07:12] 2025-04-19 14:07:00,405 | INFO     | . payload setup = 7 s
[2025-04-19 10:07:12] 2025-04-19 14:07:00,405 | INFO     | . stage-in = 0 s
[2025-04-19 10:07:12] 2025-04-19 14:07:00,405 | INFO     | . payload execution = 5343 s
[2025-04-19 10:07:12] 2025-04-19 14:07:00,405 | INFO     | . stage-out = 0 s
[2025-04-19 10:07:12] 2025-04-19 14:07:00,406 | INFO     | . log creation = 0 s
[2025-04-19 10:07:12] 2025-04-19 14:07:00,406 | INFO     | ..............................
[2025-04-19 10:07:12] 2025-04-19 14:07:00,803 | INFO     | 
[2025-04-19 10:07:12] 2025-04-19 14:07:00,804 | INFO     | job summary report
[2025-04-19 10:07:12] 2025-04-19 14:07:00,804 | INFO     | --------------------------------------------------
[2025-04-19 10:07:12] 2025-04-19 14:07:00,804 | INFO     | PanDA job id: 6607611889
[2025-04-19 10:07:12] 2025-04-19 14:07:00,804 | INFO     | task id: 44075483
[2025-04-19 10:07:12] 2025-04-19 14:07:00,804 | INFO     | errors: (none)
[2025-04-19 10:07:12] 2025-04-19 14:07:00,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 10:07:12] 2025-04-19 14:07:00,805 | INFO     | pilot state: finished 
[2025-04-19 10:07:12] 2025-04-19 14:07:00,805 | INFO     | transexitcode: 0
[2025-04-19 10:07:12] 2025-04-19 14:07:00,805 | INFO     | exeerrorcode: 0
[2025-04-19 10:07:12] 2025-04-19 14:07:00,805 | INFO     | exeerrordiag: 
[2025-04-19 10:07:12] 2025-04-19 14:07:00,805 | INFO     | exitcode: 0
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | exitmsg: OK
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | cpuconsumptiontime: 49693 s
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | nevents: 400
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | neventsw: 0
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | pid: 4117
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | pgrp: 4117
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | corecount: 12
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | event service: False
[2025-04-19 10:07:12] 2025-04-19 14:07:00,806 | INFO     | sizes: {0: 2426653, 1: 2426852, 5: 2427058, 11: 2427114, 5354: 2453498, 5357: 2462623, 5362: 2462737}
[2025-04-19 10:07:12] 2025-04-19 14:07:00,807 | INFO     | --------------------------------------------------
[2025-04-19 10:07:12] 2025-04-19 14:07:00,807 | INFO     | 
[2025-04-19 10:07:12] 2025-04-19 14:07:00,807 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 10:07:12] 2025-04-19 14:07:00,829 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,829 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,829 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,831 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,831 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,831 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,831 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,831 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,831 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,832 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 10:07:12] 2025-04-19 14:07:00,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,832 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 10:07:12] 2025-04-19 14:07:00,832 | INFO     | job 6607611889 has completed (purged errors)
[2025-04-19 10:07:12] 2025-04-19 14:07:00,832 | INFO     | overall cleanup function is called
[2025-04-19 10:07:12] 2025-04-19 14:07:01,841 | INFO     | --- collectZombieJob: --- 10, [4117]
[2025-04-19 10:07:12] 2025-04-19 14:07:01,841 | INFO     | zombie collector waiting for pid 4117
[2025-04-19 10:07:12] 2025-04-19 14:07:01,841 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 10:07:12] 2025-04-19 14:07:01,841 | INFO     | collected zombie processes
[2025-04-19 10:07:12] 2025-04-19 14:07:01,842 | INFO     | will attempt to kill all subprocesses of pid=4117
[2025-04-19 10:07:12] 2025-04-19 14:07:01,934 | INFO     | process IDs to be killed: [4117] (in reverse order)
[2025-04-19 10:07:12] 2025-04-19 14:07:01,988 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 10:07:12] 2025-04-19 14:07:01,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 10:07:12] 2025-04-19 14:07:01,992 | INFO     | did not find any defunct processes belonging to 4117
[2025-04-19 10:07:12] 2025-04-19 14:07:01,996 | INFO     | did not find any defunct processes belonging to 4117
[2025-04-19 10:07:12] 2025-04-19 14:07:01,996 | INFO     | ready for new job
[2025-04-19 10:07:12] 2025-04-19 14:07:01,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 10:07:12] 2025-04-19 14:07:01,997 | INFO     | **************************************
[2025-04-19 10:07:12] 2025-04-19 14:07:01,997 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 10:07:12] 2025-04-19 14:07:01,998 | INFO     | **************************************
[2025-04-19 10:07:12] 2025-04-19 14:07:01,998 | INFO     | 
[2025-04-19 10:07:12] 2025-04-19 14:07:01,998 | INFO     | architecture information:
[2025-04-19 10:07:12] 2025-04-19 14:07:01,999 | INFO     | executing command: cat /etc/os-release
[2025-04-19 10:07:12] 2025-04-19 14:07:02,013 | INFO     | cat /etc/os-release:
[2025-04-19 10:07:12] NAME="CentOS Linux"
[2025-04-19 10:07:12] VERSION="7 (Core)"
[2025-04-19 10:07:12] ID="centos"
[2025-04-19 10:07:12] ID_LIKE="rhel fedora"
[2025-04-19 10:07:12] VERSION_ID="7"
[2025-04-19 10:07:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 10:07:12] ANSI_COLOR="0;31"
[2025-04-19 10:07:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 10:07:12] HOME_URL="https://www.centos.org/"
[2025-04-19 10:07:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 10:07:12] 
[2025-04-19 10:07:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 10:07:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 10:07:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 10:07:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 10:07:12] 
[2025-04-19 10:07:12] 2025-04-19 14:07:02,013 | INFO     | **************************************
[2025-04-19 10:07:12] 2025-04-19 14:07:02,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 10:07:12] 2025-04-19 14:07:02,533 | INFO     | sufficient remaining disk space (29380050944 B)
[2025-04-19 10:07:12] 2025-04-19 14:07:02,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 10:07:12] 2025-04-19 14:07:02,534 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 10:07:12] 2025-04-19 14:07:02,534 | INFO     | update_server=False
[2025-04-19 10:07:12] 2025-04-19 14:07:02,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 10:07:12] 2025-04-19 14:07:02,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 10:07:12] 2025-04-19 14:07:02,595 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 10:07:12] 2025-04-19 14:07:02,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 10:07:12] 2025-04-19 14:07:02,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 10:07:12] 2025-04-19 14:07:02,874 | INFO     | all data control threads have been joined
[2025-04-19 10:07:12] 2025-04-19 14:07:03,026 | INFO     | all job control threads have been joined
[2025-04-19 10:07:12] 2025-04-19 14:07:03,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 10:07:12] 2025-04-19 14:07:03,115 | INFO     | aborting loop
[2025-04-19 10:07:12] 2025-04-19 14:07:03,214 | INFO     | all payload control threads have been joined
[2025-04-19 10:07:12] 2025-04-19 14:07:03,466 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 10:07:12] 2025-04-19 14:07:03,539 | INFO     | [job] retrieve thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:03,855 | INFO     | [job] validate thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:03,865 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:03,880 | INFO     | [data] control thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:03,895 | INFO     | [payload] validate_post thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:04,032 | INFO     | [job] control thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:04,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:04,046 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:04,120 | INFO     | [job] job monitor thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:04,146 | INFO     | [payload] failed_post thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:04,219 | INFO     | [payload] control thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:04,313 | INFO     | [data] copytool_in thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:04,702 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:05,471 | INFO     | [data] copytool_out thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:05,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 10:07:12] 2025-04-19 14:07:06,507 | INFO     | [job] queue monitor thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:06,540 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 10:07:12] 2025-04-19 14:07:07,366 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647405172544)>', '<ExcThread(monitor, started 140646614558464)>']
[2025-04-19 10:07:12] 2025-04-19 14:07:07,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 10:07:12] 2025-04-19 14:07:07,622 | INFO     | [monitor] control thread has ended
[2025-04-19 10:07:12] 2025-04-19 14:07:12,381 | INFO     | all workflow threads have been joined
[2025-04-19 10:07:12] 2025-04-19 14:07:12,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 10:07:12] 2025-04-19 14:07:12,381 | INFO     | traces error code: 0
[2025-04-19 10:07:12] 2025-04-19 14:07:12,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 10:07:12] 2025-04-19 14:07:12,463 [wrapper] ==== pilot stdout END ====
[2025-04-19 10:07:12] 2025-04-19 14:07:12,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 10:07:12] 2025-04-19 14:07:12,471 [wrapper] pilotpid: 29981
[2025-04-19 10:07:12] 2025-04-19 14:07:12,475 [wrapper] Pilot exit status: 0
[2025-04-19 10:07:12] 2025-04-19 14:07:12,491 [wrapper] pandaids: 6607611889
[2025-04-19 10:07:12] 2025-04-19 14:07:12,530 [wrapper] cleanup supervisor_pilot 15089 29982
[2025-04-19 10:07:12] 2025-04-19 14:07:12,535 [wrapper] Test setup, not cleaning
[2025-04-19 10:07:12] 2025-04-19 14:07:12,539 [wrapper] apfmon messages muted
[2025-04-19 10:07:12] 2025-04-19 14:07:12,543 [wrapper] ==== wrapper stdout END ====
[2025-04-19 10:07:12] 2025-04-19 14:07:12,546 [wrapper] ==== wrapper stderr END ====
[2025-04-19 10:07:12]  *** Error codes and diagnostics ***
[2025-04-19 10:07:12]     "exeErrorCode": 0,
[2025-04-19 10:07:12]     "exeErrorDiag": "",
[2025-04-19 10:07:12]     "pilotErrorCode": 0,
[2025-04-19 10:07:12]     "pilotErrorDiag": "",
[2025-04-19 10:07:12]  *** Listing of results directory ***
[2025-04-19 10:07:12] total 427264
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 05:22 pilot3.tar.gz
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 05:33 queuedata.json
[2025-04-19 10:07:12] -rwx------ 1 boincer umatlas     37140 Apr 19 05:33 runpilot2-wrapper.sh
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas       100 Apr 19 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 10:07:12] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 08:37 run_atlas
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas       105 Apr 19 08:37 job.xml
[2025-04-19 10:07:12] -rw-r--r-- 2 boincer umatlas 227881779 Apr 19 08:37 EVNT.44075481._003139.pool.root.1
[2025-04-19 10:07:12] drwxrwx--x 2 boincer umatlas      4096 Apr 19 08:37 shared
[2025-04-19 10:07:12] -rw-r--r-- 2 boincer umatlas    508891 Apr 19 08:37 input.tar.gz
[2025-04-19 10:07:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 08:37 start_atlas.sh
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas         0 Apr 19 08:37 boinc_lockfile
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 08:37 pandaJob.out
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas       424 Apr 19 08:37 setup.sh.local
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas    991292 Apr 19 08:37 agis_schedconf.cvmfs.json
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas   1618536 Apr 19 08:37 agis_ddmendpoints.agis.ALL.json
[2025-04-19 10:07:12] drwx------ 4 boincer umatlas      4096 Apr 19 08:37 pilot3
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas      5867 Apr 19 10:00 init_data.xml
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas 204018398 Apr 19 10:06 HITS.44075483._080938.pool.root.1
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas        95 Apr 19 10:06 pilot_heartbeat.json
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas       529 Apr 19 10:06 boinc_task_state.xml
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas      1049 Apr 19 10:06 memory_monitor_summary.json
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas    368774 Apr 19 10:06 log.44075483._080938.job.log.tgz.1
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas        27 Apr 19 10:06 wrapper_checkpoint.txt
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 10:06 boinc_mmap_file
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas      7752 Apr 19 10:07 heartbeat.json
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas      4353 Apr 19 10:07 pilotlog.txt
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas    505590 Apr 19 10:07 log.44075483._080938.job.log.1
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas       357 Apr 19 10:07 output.list
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas       620 Apr 19 10:07 runtime_log
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas    890880 Apr 19 10:07 result.tar.gz
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas       658 Apr 19 10:07 ZOSLDmDlJQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIbhLDmGDij4m.diag
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 10:07 runtime_log.err
[2025-04-19 10:07:12] -rw-r--r-- 1 boincer umatlas     21187 Apr 19 10:07 stderr.txt
[2025-04-19 10:07:12] HITS file was successfully produced:
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas 204018398 Apr 19 10:06 shared/HITS.pool.root.1
[2025-04-19 10:07:12]  *** Contents of shared directory: ***
[2025-04-19 10:07:12] total 423180
[2025-04-19 10:07:12] -rw-r--r-- 2 boincer umatlas 227881779 Apr 19 08:37 ATLAS.root_0
[2025-04-19 10:07:12] -rw-r--r-- 2 boincer umatlas    508891 Apr 19 08:37 input.tar.gz
[2025-04-19 10:07:12] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 08:37 start_atlas.sh
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas 204018398 Apr 19 10:06 HITS.pool.root.1
[2025-04-19 10:07:12] -rw------- 1 boincer umatlas    890880 Apr 19 10:07 result.tar.gz
10:07:14 (26346): run_atlas exited; CPU time 49675.045983
10:07:14 (26346): called boinc_finish(0)

</stderr_txt>
]]>

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