Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 11:08:14 (6396): Detected: vboxwrapper 26206
2025-04-19 11:08:14 (6396): Detected: BOINC client v7.22.2
2025-04-19 11:08:15 (6396): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-19 11:08:15 (6396): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 11:08:16 (6396): Create VM. (boinc_a86e735c51e285e0, slot#1)
2025-04-19 11:08:17 (6396): Setting Memory Size for VM. (4700MB)
2025-04-19 11:08:17 (6396): Setting CPU Count for VM. (7)
2025-04-19 11:08:17 (6396): Setting Chipset Options for VM.
2025-04-19 11:08:18 (6396): Setting Graphics Controller Options for VM.
2025-04-19 11:08:18 (6396): Setting Boot Options for VM.
2025-04-19 11:08:18 (6396): Setting Network Configuration for NAT.
2025-04-19 11:08:19 (6396): Enabling VM Network Access.
2025-04-19 11:08:19 (6396): Disabling USB Support for VM.
2025-04-19 11:08:19 (6396): Disabling COM Port Support for VM.
2025-04-19 11:08:20 (6396): Disabling LPT Port Support for VM.
2025-04-19 11:08:20 (6396): Disabling Audio Support for VM.
2025-04-19 11:08:20 (6396): Disabling Clipboard Support for VM.
2025-04-19 11:08:21 (6396): Disabling Drag and Drop Support for VM.
2025-04-19 11:08:21 (6396): Adding storage controller(s) to VM.
2025-04-19 11:08:21 (6396): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 11:08:25 (6396): Adding VirtualBox Guest Additions to VM.
2025-04-19 11:08:25 (6396): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 11:08:25 (6396): forwarding host port 62211 to guest port 80
2025-04-19 11:08:26 (6396): Enabling remote desktop for VM.
2025-04-19 11:08:26 (6396): Required extension pack not installed, remote desktop not enabled.
2025-04-19 11:08:26 (6396): Enabling shared directory for VM.
2025-04-19 11:08:26 (6396): Starting VM using VBoxManage interface. (boinc_a86e735c51e285e0, slot#1)
2025-04-19 11:08:37 (6396): Successfully started VM. (PID = '1660')
2025-04-19 11:08:37 (6396): Reporting VM Process ID to BOINC.
2025-04-19 11:08:37 (6396): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-19 11:08:37 (6396): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 11:08:37 (6396): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 11:08:37 (6396): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 11:08:37 (6396): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 11:08:37 (6396): Detected: Web Application Enabled (http://localhost:62211)
2025-04-19 11:08:37 (6396): Preference change detected
2025-04-19 11:08:37 (6396): Setting CPU throttle for VM. (75%)
2025-04-19 11:08:37 (6396): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 11:08:39 (6396): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 11:08:39 (6396): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 11:08:43 (6396): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 11:08:43 (6396): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 11:08:43 (6396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 11:09:00 (6396): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 11:09:00 (6396): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 11:09:34 (6396): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 11:09:34 (6396): Guest Log: 00:00:00.000355 main     Log opened 2025-04-19T11:09:33.306074000Z
2025-04-19 11:09:34 (6396): Guest Log: 00:00:00.000604 main     OS Product: Linux
2025-04-19 11:09:34 (6396): Guest Log: 00:00:00.000676 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 11:09:34 (6396): Guest Log: 00:00:00.000736 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 11:09:34 (6396): Guest Log: 00:00:00.000809 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 11:09:34 (6396): Guest Log: 00:00:00.000811 main     Process ID: 1317
2025-04-19 11:09:34 (6396): Guest Log: 00:00:00.000812 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 11:09:34 (6396): Guest Log: 00:00:00.003464 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 11:09:35 (6396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 11:09:35 (6396): Guest Log: [INFO] Mounting shared directory
2025-04-19 11:09:35 (6396): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 11:09:44 (6396): Guest Log: 00:00:10.025051 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 012 611 000ns (GuestNow=1 745 075 384 328 049 000 ns GuestLast=1 745 060 973 315 438 000 ns fSetTimeLastLoop=true )
2025-04-19 11:10:36 (6396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 11:10:36 (6396): Guest Log: [INFO] Detected branch: prod
2025-04-19 11:10:36 (6396): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 11:10:36 (6396): Guest Log: Copying input files
2025-04-19 11:10:44 (6396): Guest Log: Copied input files into RunAtlas.
2025-04-19 11:10:44 (6396): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 11:10:44 (6396): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 11:10:44 (6396): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 11:10:44 (6396): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 11:11:47 (6396): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 11:11:48 (6396): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 11:11:48 (6396): Guest Log: 2.6.3.0 1617 1 30076 145041 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 11:11:52 (6396): Guest Log: copied the webapp to /var/www
2025-04-19 11:11:52 (6396): Guest Log: ATHENA_PROC_NUMBER=7
2025-04-19 11:11:52 (6396): Guest Log: ATHENA_CORE_NUMBER=7
2025-04-19 11:11:52 (6396): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 11:11:53 (6396): Guest Log:  *** Starting ATLAS job. (PandaID=6607287939 taskID=44179027) ***
2025-04-19 11:18:10 (6396): Guest Log:  *** Job finished ***
2025-04-19 11:18:10 (6396): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:02,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:03,297 | INFO     | [job] queue monitor thread has finished
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:03,448 | INFO     | [data] queue_monitor thread has finished
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:03,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768650692416)>', '<ExcThread(monitor, started 139768218244864)>']
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:04,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:04,365 | INFO     | [monitor] control thread has ended
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:08,491 | INFO     | all workflow threads have been joined
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:08,492 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:08,493 | INFO     | traces error code: 0
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:08,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,045 [wrapper] ==== pilot stdout END ====
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,061 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,075 [wrapper] pilotpid: 5982
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,090 [wrapper] Pilot exit status: 0
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,225 [wrapper] pandaids: 6607287939
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,320 [wrapper] cleanup supervisor_pilot  5988 5983
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,354 [wrapper] Test setup, not cleaning
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,369 [wrapper] apfmon messages muted
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,384 [wrapper] ==== wrapper stdout END ====
2025-04-19 11:18:10 (6396): Guest Log: 2025-04-19 15:18:09,399 [wrapper] ==== wrapper stderr END ====
2025-04-19 11:18:10 (6396): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 11:18:10 (6396): Guest Log:     "exeErrorCode": 0,
2025-04-19 11:18:10 (6396): Guest Log:     "exeErrorDiag": "",
2025-04-19 11:18:10 (6396): Guest Log:     "pilotErrorCode": 1305,
2025-04-19 11:18:10 (6396): Guest Log:     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
2025-04-19 11:18:10 (6396): Guest Log:  *** Listing of results directory ***
2025-04-19 11:18:10 (6396): Guest Log: total 3868
2025-04-19 11:18:10 (6396): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 19 02:23 pilot3.tar.gz
2025-04-19 11:18:10 (6396): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 19 02:52 queuedata.json
2025-04-19 11:18:10 (6396): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 19 02:53 runpilot2-wrapper.sh
2025-04-19 11:18:10 (6396): Guest Log: -rwxr-xr-x. 1 atlas atlas    6103 Apr 19 15:10 init_data.xml
2025-04-19 11:18:10 (6396): Guest Log: -rwxr-xr-x. 1 atlas atlas  508859 Apr 19 15:10 input.tar.gz
2025-04-19 11:18:10 (6396): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 19 15:10 start_atlas.sh
2025-04-19 11:18:10 (6396): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 19 15:10 EVNT.44179025._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 11:18:10 (6396): Guest Log: -rw-r--r--. 1 atlas atlas    2522 Apr 19 15:11 pandaJob.out
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas     424 Apr 19 15:11 setup.sh.local
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas  991300 Apr 19 15:13 agis_schedconf.cvmfs.json
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 19 15:13 agis_ddmendpoints.agis.ALL.json
2025-04-19 11:18:10 (6396): Guest Log: drwx------. 4 atlas atlas    4096 Apr 19 15:13 pilot3
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas    8358 Apr 19 15:15 log.44179027._000017.job.log.tgz.1
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas      95 Apr 19 15:17 pilot_heartbeat.json
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas    2214 Apr 19 15:17 heartbeat.json
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas    4722 Apr 19 15:18 pilotlog.txt
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas   84256 Apr 19 15:18 log.44179027._000017.job.log.1
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas     188 Apr 19 15:18 output.list
2025-04-19 11:18:10 (6396): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 19 15:18 runtime_log
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas  102400 Apr 19 15:18 result.tar.gz
2025-04-19 11:18:10 (6396): Guest Log: -rw-r--r--. 1 atlas atlas   10794 Apr 19 15:18 runtime_log.err
2025-04-19 11:18:10 (6396): Guest Log: -rw-------. 1 atlas atlas     643 Apr 19 15:18 ac1KDmeVDQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5ngLDmN10S9m.diag
2025-04-19 11:18:10 (6396): Guest Log: Looking for outputfile HITS.44179027._000017.pool.root.1
2025-04-19 11:18:10 (6396): Guest Log: No HITS file was produced
2025-04-19 11:18:10 (6396): Guest Log: Successfully finished the ATLAS job!
2025-04-19 11:18:10 (6396): Guest Log: Copying the results back to the shared directory!
2025-04-19 11:18:11 (6396): Guest Log:  *** Contents of shared directory: ***
2025-04-19 11:18:11 (6396): Guest Log: total 248188
2025-04-19 11:18:11 (6396): Guest Log: -rwxrwxrwx. 1 root root 253498785 Apr 19 15:08 ATLAS.root_0
2025-04-19 11:18:11 (6396): Guest Log: -rwxrwxrwx. 1 root root      6103 Apr 19 15:08 init_data.xml
2025-04-19 11:18:11 (6396): Guest Log: -rwxrwxrwx. 1 root root    508859 Apr 19 12:25 input.tar.gz
2025-04-19 11:18:11 (6396): Guest Log: -rwxrwxrwx. 1 root root    102400 Apr 19 15:18 result.tar.gz
2025-04-19 11:18:11 (6396): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 19 12:25 start_atlas.sh
2025-04-19 11:18:11 (6396): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 11:18:11 (6396): VM Completion File Detected.
2025-04-19 11:18:11 (6396): Powering off VM.
2025-04-19 11:18:12 (6396): Successfully stopped VM.
2025-04-19 11:18:12 (6396): Deregistering VM. (boinc_a86e735c51e285e0, slot#1)
2025-04-19 11:18:12 (6396): Removing network bandwidth throttle group from VM.
2025-04-19 11:18:12 (6396): Removing VM from VirtualBox.
11:18:18 (6396): called boinc_finish(0)

</stderr_txt>
]]>

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