Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:17:40 (2103270): wrapper (7.7.26015): starting
08:17:40 (2103270): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 08:17:40] Arguments: --nthreads 8
[2025-04-19 08:17:40] Threads: 8
[2025-04-19 08:17:40] Checking for CVMFS
[2025-04-19 08:17:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 08:17:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 08:17:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 08:18:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 08:18:01] 2.12.6.0 3005709 35170 195520 145038 3 194 27612438 32935937 25583 130560 0 104797222 99.626 108443473 21850 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 08:18:01] CVMFS is ok
[2025-04-19 08:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 08:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 08:18:02] Further information can be found at the LHC@home message board.
[2025-04-19 08:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 08:18:02] Checking for apptainer binary...
[2025-04-19 08:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 08:18:02] Running /usr/bin/apptainer --version
[2025-04-19 08:18:02] apptainer version 1.4.0-1.el9
[2025-04-19 08:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 08:18:02] c6-8-25-1.aglt2.org
[2025-04-19 08:18:02] apptainer works
[2025-04-19 08:18:02] Set ATHENA_PROC_NUMBER=8
[2025-04-19 08:18:02] Set ATHENA_CORE_NUMBER=8
[2025-04-19 08:18:02] Starting ATLAS job with PandaID=6607611666
[2025-04-19 08:18:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:56:09]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:56:09] 2025-04-19 15:55:52,780 | INFO     | sum of deviations: 118535438592.71564
[2025-04-19 11:56:09] 2025-04-19 15:55:52,780 | INFO     | mean x: 1745071689.677725
[2025-04-19 11:56:09] 2025-04-19 15:55:52,780 | INFO     | mean y: 2360656.407582938
[2025-04-19 11:56:09] 2025-04-19 15:55:52,781 | INFO     | -- intersect: -71004328632.4281
[2025-04-19 11:56:09] 2025-04-19 15:55:52,781 | INFO     | intersect: -71004328632.4281
[2025-04-19 11:56:09] 2025-04-19 15:55:52,806 | INFO     | chi2: 8.019827362037574
[2025-04-19 11:56:09] 2025-04-19 15:55:52,806 | INFO     | sum of square deviations: 2710968213.616508
[2025-04-19 11:56:09] 2025-04-19 15:55:52,807 | INFO     | sum of deviations: 143715257266.55823
[2025-04-19 11:56:09] 2025-04-19 15:55:52,808 | INFO     | mean x: 1745071537.1893203
[2025-04-19 11:56:09] 2025-04-19 15:55:52,808 | INFO     | mean y: 2379338.344660194
[2025-04-19 11:56:09] 2025-04-19 15:55:52,833 | INFO     | -- intersect: -92508260829.26761
[2025-04-19 11:56:09] 2025-04-19 15:55:52,834 | INFO     | intersect: -92508260829.26761
[2025-04-19 11:56:09] 2025-04-19 15:55:52,834 | INFO     | chi2: 6.405769204909925
[2025-04-19 11:56:09] 2025-04-19 15:55:52,834 | INFO     | current chi2=6.405769204909925 (change=20.125846658095277 %)
[2025-04-19 11:56:09] 2025-04-19 15:55:52,834 | INFO     | right removable region: 205
[2025-04-19 11:56:09] 2025-04-19 15:55:52,835 | INFO     | sum of square deviations: 2710906359.616508
[2025-04-19 11:56:09] 2025-04-19 15:55:52,836 | INFO     | sum of deviations: 60872792014.07783
[2025-04-19 11:56:09] 2025-04-19 15:55:52,836 | INFO     | mean x: 1745071842.1893203
[2025-04-19 11:56:09] 2025-04-19 15:55:52,836 | INFO     | mean y: 2404038.126213592
[2025-04-19 11:56:09] 2025-04-19 15:55:52,836 | INFO     | -- intersect: -39182791320.02011
[2025-04-19 11:56:09] 2025-04-19 15:55:52,837 | INFO     | intersect: -39182791320.02011
[2025-04-19 11:56:09] 2025-04-19 15:55:52,837 | INFO     | chi2: 4.7897166698512095
[2025-04-19 11:56:09] 2025-04-19 15:55:52,837 | INFO     | current chi2=4.7897166698512095 (change=40.276561406749536 %)
[2025-04-19 11:56:09] 2025-04-19 15:55:52,842 | INFO     | sum of square deviations: 2518236179.6815743
[2025-04-19 11:56:09] 2025-04-19 15:55:52,843 | INFO     | sum of deviations: 19185545607.75123
[2025-04-19 11:56:09] 2025-04-19 15:55:52,843 | INFO     | mean x: 1745071994.7064676
[2025-04-19 11:56:09] 2025-04-19 15:55:52,843 | INFO     | mean y: 2437021.114427861
[2025-04-19 11:56:09] 2025-04-19 15:55:52,843 | INFO     | -- intersect: -13292645709.1654
[2025-04-19 11:56:09] 2025-04-19 15:55:52,844 | INFO     | intersect: -13292645709.1654
[2025-04-19 11:56:09] 2025-04-19 15:55:52,844 | INFO     | chi2: 3.224602136412228
[2025-04-19 11:56:09] 2025-04-19 15:55:52,844 | INFO     | current chi2=3.224602136412228 (change=32.67655774485719 %)
[2025-04-19 11:56:09] 2025-04-19 15:55:52,844 | INFO     | sum of square deviations: 2334915012.1224623
[2025-04-19 11:56:09] 2025-04-19 15:55:52,852 | INFO     | sum of deviations: -17786813951.346943
[2025-04-19 11:56:09] 2025-04-19 15:55:52,852 | INFO     | mean x: 1745072147.2244897
[2025-04-19 11:56:09] 2025-04-19 15:55:52,852 | INFO     | mean y: 2467747.5306122447
[2025-04-19 11:56:09] 2025-04-19 15:55:52,852 | INFO     | -- intersect: 13296002395.776545
[2025-04-19 11:56:09] 2025-04-19 15:55:52,852 | INFO     | intersect: 13296002395.776545
[2025-04-19 11:56:09] 2025-04-19 15:55:52,853 | INFO     | chi2: 1.965575829610731
[2025-04-19 11:56:09] 2025-04-19 15:55:52,853 | INFO     | current chi2=1.965575829610731 (change=39.04439225492546 %)
[2025-04-19 11:56:09] 2025-04-19 15:55:52,853 | INFO     | sum of square deviations: 2160710294.429327
[2025-04-19 11:56:09] 2025-04-19 15:55:52,855 | INFO     | sum of deviations: -31128564648.79057
[2025-04-19 11:56:09] 2025-04-19 15:55:52,855 | INFO     | mean x: 1745072299.7434554
[2025-04-19 11:56:09] 2025-04-19 15:55:52,855 | INFO     | mean y: 2479387.167539267
[2025-04-19 11:56:09] 2025-04-19 15:55:52,855 | INFO     | -- intersect: 25143099135.880707
[2025-04-19 11:56:09] 2025-04-19 15:55:52,855 | INFO     | intersect: 25143099135.880707
[2025-04-19 11:56:09] 2025-04-19 15:55:52,859 | INFO     | chi2: 1.776204374108489
[2025-04-19 11:56:09] 2025-04-19 15:55:52,860 | INFO     | current chi2=1.776204374108489 (change=9.634400904275763 %)
[2025-04-19 11:56:09] 2025-04-19 15:55:52,860 | INFO     | left removable region: 40
[2025-04-19 11:56:09] 2025-04-19 15:55:52,860 | INFO     | sum of square deviations: 1392954887.9030244
[2025-04-19 11:56:09] 2025-04-19 15:55:52,861 | INFO     | sum of deviations: -3848892147.3333306
[2025-04-19 11:56:09] 2025-04-19 15:55:52,861 | INFO     | mean x: 1745072726.8242424
[2025-04-19 11:56:09] 2025-04-19 15:55:52,861 | INFO     | mean y: 2501494.3333333335
[2025-04-19 11:56:09] 2025-04-19 15:55:52,862 | INFO     | -- intersect: 4824335118.041461
[2025-04-19 11:56:09] 2025-04-19 15:55:52,862 | INFO     | intersect: 4824335118.041461
[2025-04-19 11:56:09] 2025-04-19 15:55:52,862 | INFO     | chi2: 0.025043393420490254
[2025-04-19 11:56:09] 2025-04-19 15:55:52,862 | INFO     | -- intersect: 4824335118.041461
[2025-04-19 11:56:09] 2025-04-19 15:55:52,862 | INFO     | current memory leak: -2.76 B/s (using 165 data points, chi2=0.03)
[2025-04-19 11:56:09] 2025-04-19 15:55:52,863 | INFO     | ..............................
[2025-04-19 11:56:09] 2025-04-19 15:55:52,863 | INFO     | . Timing measurements:
[2025-04-19 11:56:09] 2025-04-19 15:55:52,863 | INFO     | . get job = 0 s
[2025-04-19 11:56:09] 2025-04-19 15:55:52,865 | INFO     | . initial setup = 5 s
[2025-04-19 11:56:09] 2025-04-19 15:55:52,866 | INFO     | . payload setup = 40 s
[2025-04-19 11:56:09] 2025-04-19 15:55:52,866 | INFO     | . stage-in = 0 s
[2025-04-19 11:56:09] 2025-04-19 15:55:52,866 | INFO     | . payload execution = 12870 s
[2025-04-19 11:56:09] 2025-04-19 15:55:52,866 | INFO     | . stage-out = 4 s
[2025-04-19 11:56:09] 2025-04-19 15:55:52,866 | INFO     | . log creation = 0 s
[2025-04-19 11:56:09] 2025-04-19 15:55:52,866 | INFO     | ..............................
[2025-04-19 11:56:09] 2025-04-19 15:55:53,042 | INFO     | 
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | job summary report
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | --------------------------------------------------
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | PanDA job id: 6607611666
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | task id: 44075483
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | errors: (none)
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | pilot state: finished 
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | transexitcode: 0
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | exeerrorcode: 0
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | exeerrordiag: 
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | exitcode: 0
[2025-04-19 11:56:09] 2025-04-19 15:55:53,043 | INFO     | exitmsg: OK
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | cpuconsumptiontime: 45120 s
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | nevents: 400
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | neventsw: 0
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | pid: 2121762
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | pgrp: 2121762
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | corecount: 8
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | event service: False
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | sizes: {0: 2425995, 1: 2426680, 2: 2426708, 3: 2426907, 14: 2426907, 25: 2426935, 32: 2427297, 36: 2427325, 12916: 2456943, 12921: 2465884, 12925: 2465940, 12941: 
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | --------------------------------------------------
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | 
[2025-04-19 11:56:09] 2025-04-19 15:55:53,044 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-19 11:56:09] 2025-04-19 15:55:53,148 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,149 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:56:09] 2025-04-19 15:55:53,150 | INFO     | job 6607611666 has completed (purged errors)
[2025-04-19 11:56:09] 2025-04-19 15:55:53,150 | INFO     | overall cleanup function is called
[2025-04-19 11:56:09] 2025-04-19 15:55:54,185 | INFO     | --- collectZombieJob: --- 10, [2121762]
[2025-04-19 11:56:09] 2025-04-19 15:55:54,186 | INFO     | zombie collector waiting for pid 2121762
[2025-04-19 11:56:09] 2025-04-19 15:55:54,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:56:09] 2025-04-19 15:55:54,186 | INFO     | collected zombie processes
[2025-04-19 11:56:09] 2025-04-19 15:55:54,186 | INFO     | will attempt to kill all subprocesses of pid=2121762
[2025-04-19 11:56:09] 2025-04-19 15:55:55,968 | INFO     | process IDs to be killed: [2121762] (in reverse order)
[2025-04-19 11:56:09] 2025-04-19 15:55:56,398 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:56:09] 2025-04-19 15:55:56,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:56:09] 2025-04-19 15:55:56,496 | INFO     | did not find any defunct processes belonging to 2121762
[2025-04-19 11:56:09] 2025-04-19 15:55:56,537 | INFO     | did not find any defunct processes belonging to 2121762
[2025-04-19 11:56:09] 2025-04-19 15:55:56,537 | INFO     | ready for new job
[2025-04-19 11:56:09] 2025-04-19 15:55:56,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:56:09] 2025-04-19 15:55:56,539 | INFO     | **************************************
[2025-04-19 11:56:09] 2025-04-19 15:55:56,539 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:56:09] 2025-04-19 15:55:56,539 | INFO     | **************************************
[2025-04-19 11:56:09] 2025-04-19 15:55:56,539 | INFO     | 
[2025-04-19 11:56:09] 2025-04-19 15:55:56,552 | INFO     | architecture information:
[2025-04-19 11:56:09] 2025-04-19 15:55:56,556 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:56:09] 2025-04-19 15:55:56,599 | INFO     | cat /etc/os-release:
[2025-04-19 11:56:09] NAME="CentOS Linux"
[2025-04-19 11:56:09] VERSION="7 (Core)"
[2025-04-19 11:56:09] ID="centos"
[2025-04-19 11:56:09] ID_LIKE="rhel fedora"
[2025-04-19 11:56:09] VERSION_ID="7"
[2025-04-19 11:56:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:56:09] ANSI_COLOR="0;31"
[2025-04-19 11:56:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:56:09] HOME_URL="https://www.centos.org/"
[2025-04-19 11:56:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:56:09] 
[2025-04-19 11:56:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:56:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:56:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:56:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:56:09] 
[2025-04-19 11:56:09] 2025-04-19 15:55:56,600 | INFO     | **************************************
[2025-04-19 11:56:09] 2025-04-19 15:55:57,103 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-19 11:56:09] 2025-04-19 15:55:57,209 | INFO     | sufficient remaining disk space (73745301504 B)
[2025-04-19 11:56:09] 2025-04-19 15:55:57,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:56:09] 2025-04-19 15:55:57,209 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:56:09] 2025-04-19 15:55:57,209 | INFO     | update_server=False
[2025-04-19 11:56:09] 2025-04-19 15:55:57,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:56:09] 2025-04-19 15:55:57,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:56:09] 2025-04-19 15:55:57,210 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 11:56:09] 2025-04-19 15:55:57,210 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:56:09] 2025-04-19 15:55:57,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:56:09] 2025-04-19 15:55:57,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:56:09] 2025-04-19 15:55:57,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:56:09] 2025-04-19 15:55:57,581 | INFO     | all data control threads have been joined
[2025-04-19 11:56:09] 2025-04-19 15:55:57,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:56:09] 2025-04-19 15:55:57,879 | INFO     | aborting loop
[2025-04-19 11:56:09] 2025-04-19 15:55:57,961 | INFO     | all job control threads have been joined
[2025-04-19 11:56:09] 2025-04-19 15:55:58,053 | INFO     | all payload control threads have been joined
[2025-04-19 11:56:09] 2025-04-19 15:55:58,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:56:09] 2025-04-19 15:55:58,215 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:58,396 | INFO     | [job] validate thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:58,442 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:58,443 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:58,587 | INFO     | [data] control thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:58,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:58,884 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:58,967 | INFO     | [job] control thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:59,041 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:59,050 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:59,059 | INFO     | [payload] control thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:59,068 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:59,223 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:59,444 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:55:59,550 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:56:01,219 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:56:09] 2025-04-19 15:56:02,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139782448916288)>', '<ExcThread(monitor, started 139782084601600)>']
[2025-04-19 11:56:09] 2025-04-19 15:56:03,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:56:09] 2025-04-19 15:56:03,246 | INFO     | [monitor] control thread has ended
[2025-04-19 11:56:09] 2025-04-19 15:56:07,962 | INFO     | all workflow threads have been joined
[2025-04-19 11:56:09] 2025-04-19 15:56:07,963 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:56:09] 2025-04-19 15:56:07,963 | INFO     | traces error code: 0
[2025-04-19 11:56:09] 2025-04-19 15:56:07,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:56:09] 2025-04-19 15:56:08,159 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:56:09] 2025-04-19 15:56:08,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:56:09] 2025-04-19 15:56:08,185 [wrapper] pilotpid: 2109959
[2025-04-19 11:56:09] 2025-04-19 15:56:08,230 [wrapper] Pilot exit status: 0
[2025-04-19 11:56:09] 2025-04-19 15:56:08,329 [wrapper] pandaids: 6607611666
[2025-04-19 11:56:09] 2025-04-19 15:56:08,558 [wrapper] cleanup supervisor_pilot 2937730 2109960
[2025-04-19 11:56:09] 2025-04-19 15:56:08,561 [wrapper] Test setup, not cleaning
[2025-04-19 11:56:09] 2025-04-19 15:56:08,564 [wrapper] apfmon messages muted
[2025-04-19 11:56:09] 2025-04-19 15:56:08,573 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:56:09] 2025-04-19 15:56:08,576 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:56:09]  *** Error codes and diagnostics ***
[2025-04-19 11:56:09]     "exeErrorCode": 0,
[2025-04-19 11:56:09]     "exeErrorDiag": "",
[2025-04-19 11:56:09]     "pilotErrorCode": 0,
[2025-04-19 11:56:09]     "pilotErrorDiag": "",
[2025-04-19 11:56:09]  *** Listing of results directory ***
[2025-04-19 11:56:09] total 422376
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 05:06 pilot3.tar.gz
[2025-04-19 11:56:09] -rwx------. 1 boincer umatlas     37140 Apr 19 05:12 runpilot2-wrapper.sh
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 05:12 queuedata.json
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas       100 Apr 19 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:56:09] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 08:17 run_atlas
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas       105 Apr 19 08:17 job.xml
[2025-04-19 11:56:09] -rw-r--r--. 2 boincer umatlas 226613523 Apr 19 08:17 EVNT.44075481._003130.pool.root.1
[2025-04-19 11:56:09] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 08:17 start_atlas.sh
[2025-04-19 11:56:09] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 08:17 shared
[2025-04-19 11:56:09] -rw-r--r--. 2 boincer umatlas    508888 Apr 19 08:17 input.tar.gz
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas         0 Apr 19 08:17 boinc_lockfile
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 08:18 pandaJob.out
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas       467 Apr 19 08:18 setup.sh.local
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas    991292 Apr 19 08:18 agis_schedconf.cvmfs.json
[2025-04-19 11:56:09] drwx------. 4 boincer umatlas      4096 Apr 19 08:19 pilot3
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas       531 Apr 19 11:53 boinc_task_state.xml
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas 199122287 Apr 19 11:53 HITS.44075483._080720.pool.root.1
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas        95 Apr 19 11:55 pilot_heartbeat.json
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas      1054 Apr 19 11:55 memory_monitor_summary.json
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas   1618536 Apr 19 11:55 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas    386356 Apr 19 11:55 log.44075483._080720.job.log.tgz.1
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas      6856 Apr 19 11:55 init_data.xml
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas      7750 Apr 19 11:55 heartbeat.json
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas        28 Apr 19 11:55 wrapper_checkpoint.txt
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 11:55 boinc_mmap_file
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas      4476 Apr 19 11:56 pilotlog.txt
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas   1068153 Apr 19 11:56 log.44075483._080720.job.log.1
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas       357 Apr 19 11:56 output.list
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas       620 Apr 19 11:56 runtime_log
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas   1474560 Apr 19 11:56 result.tar.gz
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas       660 Apr 19 11:56 vZ0KDmAQJQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4YhLDmS9R6Ao.diag
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas     11424 Apr 19 11:56 runtime_log.err
[2025-04-19 11:56:09] -rw-r--r--. 1 boincer umatlas     20885 Apr 19 11:56 stderr.txt
[2025-04-19 11:56:09] HITS file was successfully produced:
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas 199122287 Apr 19 11:53 shared/HITS.pool.root.1
[2025-04-19 11:56:09]  *** Contents of shared directory: ***
[2025-04-19 11:56:09] total 417728
[2025-04-19 11:56:09] -rw-r--r--. 2 boincer umatlas 226613523 Apr 19 08:17 ATLAS.root_0
[2025-04-19 11:56:09] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 08:17 start_atlas.sh
[2025-04-19 11:56:09] -rw-r--r--. 2 boincer umatlas    508888 Apr 19 08:17 input.tar.gz
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas 199122287 Apr 19 11:53 HITS.pool.root.1
[2025-04-19 11:56:09] -rw-------. 1 boincer umatlas   1474560 Apr 19 11:56 result.tar.gz
11:56:10 (2103270): run_atlas exited; CPU time 45647.393122
11:56:10 (2103270): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN