Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:56:06 (9457): wrapper (7.7.26015): starting
07:56:06 (9457): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 07:56:06] Arguments: --nthreads 12
[2025-04-19 07:56:06] Threads: 12
[2025-04-19 07:56:06] Checking for CVMFS
[2025-04-19 07:56:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 07:56:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 07:56:06] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 07:56:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 07:56:06] 2.11.2.0 3124 83091 156472 145037 3 56 20015418 20275201 1 130560 0 24949760 99.972 7975442 47340 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 07:56:06] CVMFS is ok
[2025-04-19 07:56:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 07:56:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 07:56:06] Further information can be found at the LHC@home message board.
[2025-04-19 07:56:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 07:56:06] Checking for apptainer binary...
[2025-04-19 07:56:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 07:56:06] Running /usr/bin/apptainer --version
[2025-04-19 07:56:06] apptainer version 1.3.2-1.el7
[2025-04-19 07:56:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 07:56:08] c-205-29.aglt2.org
[2025-04-19 07:56:08] apptainer works
[2025-04-19 07:56:08] Set ATHENA_PROC_NUMBER=12
[2025-04-19 07:56:08] Set ATHENA_CORE_NUMBER=12
[2025-04-19 07:56:08] Starting ATLAS job with PandaID=6607430380
[2025-04-19 07:56:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 09:16:23]  *** The last 200 lines of the pilot log: ***
[2025-04-19 09:16:23]  lfn=log.44075483._078661.job.log.tgz.1
[2025-04-19 09:16:23]  mtime=0
[2025-04-19 09:16:23]  protocol_id=None
[2025-04-19 09:16:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 09:16:23]  replicas=None
[2025-04-19 09:16:23]  scope=mc23_13p6TeV
[2025-04-19 09:16:23]  status=None
[2025-04-19 09:16:23]  status_code=0
[2025-04-19 09:16:23]  storage_token=
[2025-04-19 09:16:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6607430380/log.44075483._078661.job.log.tgz.1
[2025-04-19 09:16:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/65/log.44075483._078661.job.log.tgz.1
[2025-04-19 09:16:23]  workdir=None
[2025-04-19 09:16:23] ]
[2025-04-19 09:16:23] 2025-04-19 13:15:59,867 | INFO     | transferring file log.44075483._078661.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607430380/log.44075483._078661.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 09:16:23] 2025-04-19 13:15:59,867 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607430380/log.44075483._078661.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._078661.job
[2025-04-19 09:16:23] 2025-04-19 13:15:59,889 | INFO     | adding to output.list: log.44075483._078661.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/65/log.44075483._078661.job.log.tg
[2025-04-19 09:16:23] 2025-04-19 13:15:59,890 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 09:16:23] 2025-04-19 13:15:59,891 | INFO     | summary of transferred files:
[2025-04-19 09:16:23] 2025-04-19 13:15:59,891 | INFO     |  -- lfn=log.44075483._078661.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 09:16:23] 2025-04-19 13:15:59,891 | INFO     | stage-out finished correctly
[2025-04-19 09:16:23] 2025-04-19 13:16:01,828 | INFO     | monitor loop #357: job 0:6607430380 is in state 'finished'
[2025-04-19 09:16:23] 2025-04-19 13:16:01,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:16:23] 2025-04-19 13:16:02,567 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 09:16:23] 2025-04-19 13:16:03,754 | INFO     | job 6607430380 has state=finished
[2025-04-19 09:16:23] 2025-04-19 13:16:03,754 | INFO     | preparing for final server update for job 6607430380 in state='finished'
[2025-04-19 09:16:23] 2025-04-19 13:16:03,755 | INFO     | this job has now completed (state=finished)
[2025-04-19 09:16:23] 2025-04-19 13:16:03,755 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 09:16:23] 2025-04-19 13:16:03,755 | INFO     | log transfer has been attempted: DONE
[2025-04-19 09:16:23] 2025-04-19 13:16:03,756 | INFO     | job 6607430380 has finished - writing final server update
[2025-04-19 09:16:23] 2025-04-19 13:16:03,756 | INFO     | total number of processed events: 400 (read)
[2025-04-19 09:16:23] 2025-04-19 13:16:03,758 | INFO     | executing command: lscpu
[2025-04-19 09:16:23] 2025-04-19 13:16:03,786 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 09:16:23] 2025-04-19 13:16:04,329 | INFO     | monitor loop #358: job 0:6607430380 is in state 'finished'
[2025-04-19 09:16:23] 2025-04-19 13:16:04,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:16:23] 2025-04-19 13:16:06,831 | INFO     | monitor loop #359: job 0:6607430380 is in state 'finished'
[2025-04-19 09:16:23] 2025-04-19 13:16:06,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:16:23] 2025-04-19 13:16:09,334 | INFO     | monitor loop #360: job 0:6607430380 is in state 'finished'
[2025-04-19 09:16:23] 2025-04-19 13:16:09,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 09:16:23] 2025-04-19 13:16:09,815 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 09:16:23] 2025-04-19 13:16:09,815 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607430380/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 09:16:23] 2025-04-19 13:16:09,816 | INFO     | extracted standard info from prmon json
[2025-04-19 09:16:23] 2025-04-19 13:16:09,816 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 09:16:23] 2025-04-19 13:16:09,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 09:16:23] 2025-04-19 13:16:09,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 09:16:23] 2025-04-19 13:16:09,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 09:16:23] 2025-04-19 13:16:09,820 | INFO     | fitting pss+swap vs Time
[2025-04-19 09:16:23] 2025-04-19 13:16:09,820 | INFO     | sum of square deviations: 110960220.0
[2025-04-19 09:16:23] 2025-04-19 13:16:09,820 | INFO     | sum of deviations: 20582104427.999996
[2025-04-19 09:16:23] 2025-04-19 13:16:09,820 | INFO     | mean x: 1745066250.0
[2025-04-19 09:16:23] 2025-04-19 13:16:09,820 | INFO     | mean y: 2538691.028169014
[2025-04-19 09:16:23] 2025-04-19 13:16:09,821 | INFO     | -- intersect: -323691266091.2473
[2025-04-19 09:16:23] 2025-04-19 13:16:09,821 | INFO     | intersect: -323691266091.2473
[2025-04-19 09:16:23] 2025-04-19 13:16:09,821 | INFO     | chi2: 1.8406311359165008
[2025-04-19 09:16:23] 2025-04-19 13:16:09,821 | INFO     | -- intersect: -323691266091.2473
[2025-04-19 09:16:23] 2025-04-19 13:16:09,821 | INFO     | current memory leak: 185.49 B/s (using 71 data points, chi2=1.84)
[2025-04-19 09:16:23] 2025-04-19 13:16:09,822 | INFO     | ..............................
[2025-04-19 09:16:23] 2025-04-19 13:16:09,822 | INFO     | . Timing measurements:
[2025-04-19 09:16:23] 2025-04-19 13:16:09,822 | INFO     | . get job = 0 s
[2025-04-19 09:16:23] 2025-04-19 13:16:09,822 | INFO     | . initial setup = 2 s
[2025-04-19 09:16:23] 2025-04-19 13:16:09,822 | INFO     | . payload setup = 7 s
[2025-04-19 09:16:23] 2025-04-19 13:16:09,822 | INFO     | . stage-in = 0 s
[2025-04-19 09:16:23] 2025-04-19 13:16:09,822 | INFO     | . payload execution = 4751 s
[2025-04-19 09:16:23] 2025-04-19 13:16:09,822 | INFO     | . stage-out = 0 s
[2025-04-19 09:16:23] 2025-04-19 13:16:09,823 | INFO     | . log creation = 0 s
[2025-04-19 09:16:23] 2025-04-19 13:16:09,823 | INFO     | ..............................
[2025-04-19 09:16:23] 2025-04-19 13:16:09,907 | INFO     | 
[2025-04-19 09:16:23] 2025-04-19 13:16:09,907 | INFO     | job summary report
[2025-04-19 09:16:23] 2025-04-19 13:16:09,908 | INFO     | --------------------------------------------------
[2025-04-19 09:16:23] 2025-04-19 13:16:09,908 | INFO     | PanDA job id: 6607430380
[2025-04-19 09:16:23] 2025-04-19 13:16:09,908 | INFO     | task id: 44075483
[2025-04-19 09:16:23] 2025-04-19 13:16:09,908 | INFO     | errors: (none)
[2025-04-19 09:16:23] 2025-04-19 13:16:09,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | pilot state: finished 
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | transexitcode: 0
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | exeerrorcode: 0
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | exeerrordiag: 
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | exitcode: 0
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | exitmsg: OK
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | cpuconsumptiontime: 45144 s
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | nevents: 400
[2025-04-19 09:16:23] 2025-04-19 13:16:09,909 | INFO     | neventsw: 0
[2025-04-19 09:16:23] 2025-04-19 13:16:09,910 | INFO     | pid: 19475
[2025-04-19 09:16:23] 2025-04-19 13:16:09,910 | INFO     | pgrp: 19475
[2025-04-19 09:16:23] 2025-04-19 13:16:09,910 | INFO     | corecount: 12
[2025-04-19 09:16:23] 2025-04-19 13:16:09,910 | INFO     | event service: False
[2025-04-19 09:16:23] 2025-04-19 13:16:09,910 | INFO     | sizes: {0: 2426818, 5: 2427024, 11: 2427080, 4762: 2453178, 4763: 2462119, 4765: 2462175, 4773: 2462473}
[2025-04-19 09:16:23] 2025-04-19 13:16:09,910 | INFO     | --------------------------------------------------
[2025-04-19 09:16:23] 2025-04-19 13:16:09,910 | INFO     | 
[2025-04-19 09:16:23] 2025-04-19 13:16:09,910 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 09:16:23] 2025-04-19 13:16:09,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,935 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 09:16:23] 2025-04-19 13:16:09,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 09:16:23] 2025-04-19 13:16:09,938 | INFO     | job 6607430380 has completed (purged errors)
[2025-04-19 09:16:23] 2025-04-19 13:16:09,938 | INFO     | overall cleanup function is called
[2025-04-19 09:16:23] 2025-04-19 13:16:10,067 | INFO     | PID=13060 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 09:16:23] 2025-04-19 13:16:10,953 | INFO     | --- collectZombieJob: --- 10, [19475]
[2025-04-19 09:16:23] 2025-04-19 13:16:10,953 | INFO     | zombie collector waiting for pid 19475
[2025-04-19 09:16:23] 2025-04-19 13:16:10,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 09:16:23] 2025-04-19 13:16:10,953 | INFO     | collected zombie processes
[2025-04-19 09:16:23] 2025-04-19 13:16:10,953 | INFO     | will attempt to kill all subprocesses of pid=19475
[2025-04-19 09:16:23] 2025-04-19 13:16:11,043 | INFO     | process IDs to be killed: [19475] (in reverse order)
[2025-04-19 09:16:23] 2025-04-19 13:16:11,095 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 09:16:23] 2025-04-19 13:16:11,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 09:16:23] 2025-04-19 13:16:11,099 | INFO     | did not find any defunct processes belonging to 19475
[2025-04-19 09:16:23] 2025-04-19 13:16:11,101 | INFO     | did not find any defunct processes belonging to 19475
[2025-04-19 09:16:23] 2025-04-19 13:16:11,102 | INFO     | ready for new job
[2025-04-19 09:16:23] 2025-04-19 13:16:11,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 09:16:23] 2025-04-19 13:16:11,103 | INFO     | **************************************
[2025-04-19 09:16:23] 2025-04-19 13:16:11,103 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 09:16:23] 2025-04-19 13:16:11,103 | INFO     | **************************************
[2025-04-19 09:16:23] 2025-04-19 13:16:11,103 | INFO     | 
[2025-04-19 09:16:23] 2025-04-19 13:16:11,104 | INFO     | architecture information:
[2025-04-19 09:16:23] 2025-04-19 13:16:11,104 | INFO     | executing command: cat /etc/os-release
[2025-04-19 09:16:23] 2025-04-19 13:16:11,119 | INFO     | cat /etc/os-release:
[2025-04-19 09:16:23] NAME="CentOS Linux"
[2025-04-19 09:16:23] VERSION="7 (Core)"
[2025-04-19 09:16:23] ID="centos"
[2025-04-19 09:16:23] ID_LIKE="rhel fedora"
[2025-04-19 09:16:23] VERSION_ID="7"
[2025-04-19 09:16:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 09:16:23] ANSI_COLOR="0;31"
[2025-04-19 09:16:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 09:16:23] HOME_URL="https://www.centos.org/"
[2025-04-19 09:16:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 09:16:23] 
[2025-04-19 09:16:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 09:16:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 09:16:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 09:16:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 09:16:23] 
[2025-04-19 09:16:23] 2025-04-19 13:16:11,119 | INFO     | **************************************
[2025-04-19 09:16:23] 2025-04-19 13:16:11,622 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 09:16:23] 2025-04-19 13:16:11,639 | INFO     | sufficient remaining disk space (29389488128 B)
[2025-04-19 09:16:23] 2025-04-19 13:16:11,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 09:16:23] 2025-04-19 13:16:11,640 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 09:16:23] 2025-04-19 13:16:11,640 | INFO     | update_server=False
[2025-04-19 09:16:23] 2025-04-19 13:16:11,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 09:16:23] 2025-04-19 13:16:11,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:16:23] 2025-04-19 13:16:11,716 | INFO     | all data control threads have been joined
[2025-04-19 09:16:23] 2025-04-19 13:16:11,837 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 09:16:23] 2025-04-19 13:16:11,838 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 09:16:23] 2025-04-19 13:16:11,838 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:16:23] 2025-04-19 13:16:11,838 | INFO     | will abort loop
[2025-04-19 09:16:23] 2025-04-19 13:16:12,073 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 09:16:23] 2025-04-19 13:16:12,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 09:16:23] 2025-04-19 13:16:12,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 09:16:23] 2025-04-19 13:16:12,646 | INFO     | [job] retrieve thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:12,646 | INFO     | [job] queue monitor thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:12,722 | INFO     | [data] control thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:12,789 | INFO     | [data] copytool_in thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:12,843 | INFO     | [job] job monitor thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:12,931 | INFO     | [payload] validate_post thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:12,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 09:16:23] 2025-04-19 13:16:13,058 | INFO     | all payload control threads have been joined
[2025-04-19 09:16:23] 2025-04-19 13:16:13,118 | INFO     | all job control threads have been joined
[2025-04-19 09:16:23] 2025-04-19 13:16:13,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 09:16:23] 2025-04-19 13:16:13,422 | INFO     | [payload] failed_post thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:13,543 | INFO     | [job] validate thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:13,550 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:13,607 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:13,783 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:13,921 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:14,062 | INFO     | [payload] control thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:14,122 | INFO     | [job] control thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:14,999 | INFO     | [data] copytool_out thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:17,162 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 09:16:23] 2025-04-19 13:16:18,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813831735104)>', '<ExcThread(monitor, started 139813239899904)>']
[2025-04-19 09:16:23] 2025-04-19 13:16:19,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 09:16:23] 2025-04-19 13:16:19,109 | INFO     | [monitor] control thread has ended
[2025-04-19 09:16:23] 2025-04-19 13:16:23,506 | INFO     | all workflow threads have been joined
[2025-04-19 09:16:23] 2025-04-19 13:16:23,506 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 09:16:23] 2025-04-19 13:16:23,506 | INFO     | traces error code: 0
[2025-04-19 09:16:23] 2025-04-19 13:16:23,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 09:16:23] 2025-04-19 13:16:23,595 [wrapper] ==== pilot stdout END ====
[2025-04-19 09:16:23] 2025-04-19 13:16:23,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 09:16:23] 2025-04-19 13:16:23,602 [wrapper] pilotpid: 13060
[2025-04-19 09:16:23] 2025-04-19 13:16:23,606 [wrapper] Pilot exit status: 0
[2025-04-19 09:16:23] 2025-04-19 13:16:23,621 [wrapper] pandaids: 6607430380
[2025-04-19 09:16:23] 2025-04-19 13:16:23,658 [wrapper] cleanup supervisor_pilot  4135 13061
[2025-04-19 09:16:23] 2025-04-19 13:16:23,662 [wrapper] Test setup, not cleaning
[2025-04-19 09:16:23] 2025-04-19 13:16:23,666 [wrapper] apfmon messages muted
[2025-04-19 09:16:23] 2025-04-19 13:16:23,670 [wrapper] ==== wrapper stdout END ====
[2025-04-19 09:16:23] 2025-04-19 13:16:23,673 [wrapper] ==== wrapper stderr END ====
[2025-04-19 09:16:23]  *** Error codes and diagnostics ***
[2025-04-19 09:16:23]     "exeErrorCode": 0,
[2025-04-19 09:16:23]     "exeErrorDiag": "",
[2025-04-19 09:16:23]     "pilotErrorCode": 0,
[2025-04-19 09:16:23]     "pilotErrorDiag": "",
[2025-04-19 09:16:23]  *** Listing of results directory ***
[2025-04-19 09:16:23] total 416096
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 01:48 pilot3.tar.gz
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 02:04 queuedata.json
[2025-04-19 09:16:23] -rwx------ 1 boincer umatlas     37140 Apr 19 02:06 runpilot2-wrapper.sh
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas       100 Apr 19 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 09:16:23] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 07:56 run_atlas
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas       105 Apr 19 07:56 job.xml
[2025-04-19 09:16:23] -rw-r--r-- 2 boincer umatlas 222890054 Apr 19 07:56 EVNT.44075481._003052.pool.root.1
[2025-04-19 09:16:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 07:56 start_atlas.sh
[2025-04-19 09:16:23] drwxrwx--x 2 boincer umatlas      4096 Apr 19 07:56 shared
[2025-04-19 09:16:23] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 07:56 input.tar.gz
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas         0 Apr 19 07:56 boinc_lockfile
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas      2576 Apr 19 07:56 pandaJob.out
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas       424 Apr 19 07:56 setup.sh.local
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas    991292 Apr 19 07:56 agis_schedconf.cvmfs.json
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas   1618536 Apr 19 07:56 agis_ddmendpoints.agis.ALL.json
[2025-04-19 09:16:23] drwx------ 4 boincer umatlas      4096 Apr 19 07:56 pilot3
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas      5867 Apr 19 09:13 init_data.xml
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas        95 Apr 19 09:15 pilot_heartbeat.json
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas 197711536 Apr 19 09:15 HITS.44075483._078661.pool.root.1
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas       529 Apr 19 09:15 boinc_task_state.xml
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas      1060 Apr 19 09:15 memory_monitor_summary.json
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas    350265 Apr 19 09:15 log.44075483._078661.job.log.tgz.1
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas        27 Apr 19 09:16 wrapper_checkpoint.txt
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 09:16 boinc_mmap_file
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas      7748 Apr 19 09:16 heartbeat.json
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas      4539 Apr 19 09:16 pilotlog.txt
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas    456888 Apr 19 09:16 log.44075483._078661.job.log.1
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas       357 Apr 19 09:16 output.list
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas       620 Apr 19 09:16 runtime_log
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas    829440 Apr 19 09:16 result.tar.gz
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas       658 Apr 19 09:16 VkJMDmKWGQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmkB6KDmuyNBdm.diag
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 09:16 runtime_log.err
[2025-04-19 09:16:23] -rw-r--r-- 1 boincer umatlas     21652 Apr 19 09:16 stderr.txt
[2025-04-19 09:16:23] HITS file was successfully produced:
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas 197711536 Apr 19 09:15 shared/HITS.pool.root.1
[2025-04-19 09:16:23]  *** Contents of shared directory: ***
[2025-04-19 09:16:23] total 412080
[2025-04-19 09:16:23] -rw-r--r-- 2 boincer umatlas 222890054 Apr 19 07:56 ATLAS.root_0
[2025-04-19 09:16:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 07:56 start_atlas.sh
[2025-04-19 09:16:23] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 07:56 input.tar.gz
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas 197711536 Apr 19 09:15 HITS.pool.root.1
[2025-04-19 09:16:23] -rw------- 1 boincer umatlas    829440 Apr 19 09:16 result.tar.gz
09:16:25 (9457): run_atlas exited; CPU time 45132.527430
09:16:25 (9457): called boinc_finish(0)

</stderr_txt>
]]>

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