Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-20 05:30:58 (4485): Detected: vboxwrapper 26206
2025-04-20 05:30:58 (4485): Detected: BOINC client v8.0.4
2025-04-20 05:30:58 (4485): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-20 05:30:59 (4485): Successfully copied 'init_data.xml' to the shared directory.
2025-04-20 05:30:59 (4485): Create VM. (boinc_4e86ddca7c4dbc22, slot#1)
2025-04-20 05:30:59 (4485): Setting Memory Size for VM. (4000MB)
2025-04-20 05:30:59 (4485): Setting CPU Count for VM. (4)
2025-04-20 05:30:59 (4485): Setting Chipset Options for VM.
2025-04-20 05:30:59 (4485): Setting Graphics Controller Options for VM.
2025-04-20 05:30:59 (4485): Setting Boot Options for VM.
2025-04-20 05:30:59 (4485): Setting Network Configuration for NAT.
2025-04-20 05:30:59 (4485): Enabling VM Network Access.
2025-04-20 05:30:59 (4485): Disabling USB Support for VM.
2025-04-20 05:30:59 (4485): Disabling COM Port Support for VM.
2025-04-20 05:30:59 (4485): Disabling LPT Port Support for VM.
2025-04-20 05:30:59 (4485): Disabling Audio Support for VM.
2025-04-20 05:30:59 (4485): Disabling Clipboard Support for VM.
2025-04-20 05:31:00 (4485): Disabling Drag and Drop Support for VM.
2025-04-20 05:31:00 (4485): Adding storage controller(s) to VM.
2025-04-20 05:31:00 (4485): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-20 05:31:01 (4485): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-20 05:31:01 (4485): forwarding host port 53923 to guest port 80
2025-04-20 05:31:01 (4485): Enabling remote desktop for VM.
2025-04-20 05:31:01 (4485): Required extension pack not installed, remote desktop not enabled.
2025-04-20 05:31:01 (4485): Enabling shared directory for VM.
2025-04-20 05:31:01 (4485): Starting VM using VBoxManage interface. (boinc_4e86ddca7c4dbc22, slot#1)
2025-04-20 05:31:03 (4485): Successfully started VM. (PID = '4738')
2025-04-20 05:31:03 (4485): Reporting VM Process ID to BOINC.
2025-04-20 05:31:03 (4485): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-20 05:31:03 (4485): Guest Log: CPUID EDX: 0x178bfbff
2025-04-20 05:31:03 (4485): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-20 05:31:03 (4485): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-20 05:31:03 (4485): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-20 05:31:03 (4485): Detected: Web Application Enabled (http://localhost:53923)
2025-04-20 05:31:03 (4485): Preference change detected
2025-04-20 05:31:03 (4485): Setting CPU throttle for VM. (100%)
2025-04-20 05:31:03 (4485): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-20 05:31:05 (4485): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-20 05:31:05 (4485): Guest Log: BIOS: Booting from Hard Disk...
2025-04-20 05:31:08 (4485): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-20 05:31:08 (4485): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-20 05:31:08 (4485): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-20 05:31:16 (4485): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-20 05:31:16 (4485): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-20 05:31:29 (4485): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-20 05:31:29 (4485): Guest Log: 00:00:00.000172 main     Log opened 2025-04-20T04:31:27.534831000Z
2025-04-20 05:31:29 (4485): Guest Log: 00:00:00.000263 main     OS Product: Linux
2025-04-20 05:31:29 (4485): Guest Log: 00:00:00.000282 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-20 05:31:29 (4485): Guest Log: 00:00:00.000295 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-20 05:31:29 (4485): Guest Log: 00:00:00.000315 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-20 05:31:29 (4485): Guest Log: 00:00:00.000315 main     Process ID: 1285
2025-04-20 05:31:29 (4485): Guest Log: 00:00:00.000316 main     Package type: LINUX_64BITS_GENERIC
2025-04-20 05:31:29 (4485): Guest Log: 00:00:00.001169 main     5.2.32 r132073 started. Verbose level = 0
2025-04-20 05:31:31 (4485): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-20 05:31:31 (4485): Guest Log: [INFO] Mounting shared directory
2025-04-20 05:31:31 (4485): Guest Log: [INFO] Checking for init_data.xml
2025-04-20 05:31:36 (4485): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-20 05:31:36 (4485): Guest Log: [INFO] Detected branch: prod
2025-04-20 05:31:36 (4485): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-20 05:31:36 (4485): Guest Log: Copying input files
2025-04-20 05:31:36 (4485): Guest Log: Copied input files into RunAtlas.
2025-04-20 05:31:36 (4485): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.155:3128 - will set in /etc/cvmfs/default.local
2025-04-20 05:31:52 (4485): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-20 05:31:52 (4485): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-20 05:31:52 (4485): Guest Log: 2.6.3.0 1560 0 31604 145063 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.155:3128 1
2025-04-20 05:31:54 (4485): Guest Log: copied the webapp to /var/www
2025-04-20 05:31:54 (4485): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-20 05:31:54 (4485): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-20 05:31:55 (4485): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-20 05:31:55 (4485): Guest Log:  *** Starting ATLAS job. (PandaID=6607611247 taskID=44075483) ***
2025-04-20 07:10:03 (4485): Status Report: Elapsed Time: '6000.000000'
2025-04-20 07:10:03 (4485): Status Report: CPU Time: '22150.750000'
2025-04-20 07:39:11 (4485): Guest Log:  *** Job finished ***
2025-04-20 07:39:11 (4485): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:38:57,823 | INFO     | [data] queue_monitor thread has finished
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:02,584 | INFO     | job.realtimelogging is not enabled
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:03,585 | INFO     | [payload] run_realtimelog thread has finished
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:04,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912378779456)>', '<ExcThread(monitor, started 139911495669504)>']
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:04,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:04,832 | INFO     | [monitor] control thread has ended
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,677 | INFO     | all workflow threads have been joined
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,677 | INFO     | end of generic workflow (traces error code: 0)
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,677 | INFO     | traces error code: 0
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,832 [wrapper] ==== pilot stdout END ====
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,836 [wrapper] ==== wrapper stdout RESUME ====
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,840 [wrapper] pilotpid: 5883
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,845 [wrapper] Pilot exit status: 0
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,874 [wrapper] pandaids: 6607611247
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,910 [wrapper] cleanup supervisor_pilot  4823 5884
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,918 [wrapper] Test setup, not cleaning
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,923 [wrapper] apfmon messages muted
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,930 [wrapper] ==== wrapper stdout END ====
2025-04-20 07:39:11 (4485): Guest Log: 2025-04-20 06:39:09,936 [wrapper] ==== wrapper stderr END ====
2025-04-20 07:39:11 (4485): Guest Log:  *** Error codes and diagnostics ***
2025-04-20 07:39:11 (4485): Guest Log:     "exeErrorCode": 0,
2025-04-20 07:39:11 (4485): Guest Log:     "exeErrorDiag": "",
2025-04-20 07:39:11 (4485): Guest Log:     "pilotErrorCode": 0,
2025-04-20 07:39:11 (4485): Guest Log:     "pilotErrorDiag": "",
2025-04-20 07:39:11 (4485): Guest Log:  *** Listing of results directory ***
2025-04-20 07:39:11 (4485): Guest Log: total 196524
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 19 08:36 pilot3.tar.gz
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 19 08:50 queuedata.json
2025-04-20 07:39:11 (4485): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 19 08:50 runpilot2-wrapper.sh
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 20 04:31 start_atlas.sh
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 atlas atlas    508888 Apr 20 04:31 input.tar.gz
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 atlas atlas      9224 Apr 20 04:31 init_data.xml
2025-04-20 07:39:11 (4485): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 20 04:31 EVNT.44075481._003120.pool.root.1 -> /data/./ATLAS.root_0
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 20 04:31 pandaJob.out
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas       460 Apr 20 04:31 setup.sh.local
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 20 04:32 agis_schedconf.cvmfs.json
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 20 04:32 agis_ddmendpoints.agis.ALL.json
2025-04-20 07:39:11 (4485): Guest Log: drwx------. 4 atlas atlas      4096 Apr 20 04:32 pilot3
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas 195598118 Apr 20 06:38 HITS.44075483._080473.pool.root.1
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas      1032 Apr 20 06:38 memory_monitor_summary.json
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas    274974 Apr 20 06:38 log.44075483._080473.job.log.tgz.1
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas        95 Apr 20 06:38 pilot_heartbeat.json
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas      7696 Apr 20 06:38 heartbeat.json
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 20 06:39 pilotlog.txt
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas    643618 Apr 20 06:39 log.44075483._080473.job.log.1
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas       357 Apr 20 06:39 output.list
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 20 06:39 runtime_log
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas    942080 Apr 20 06:39 result.tar.gz
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 atlas atlas     11315 Apr 20 06:39 runtime_log.err
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas       661 Apr 20 06:39 7kMLDm74IQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmfK6KDmM471gm.diag
2025-04-20 07:39:11 (4485): Guest Log: Looking for outputfile HITS.44075483._080473.pool.root.1
2025-04-20 07:39:11 (4485): Guest Log: HITS file was successfully produced
2025-04-20 07:39:11 (4485): Guest Log: -rw-------. 1 atlas atlas 195598118 Apr 20 06:38 /home/atlas/RunAtlas/HITS.44075483._080473.pool.root.1
2025-04-20 07:39:11 (4485): Guest Log: Successfully finished the ATLAS job!
2025-04-20 07:39:11 (4485): Guest Log: Copying the results back to the shared directory!
2025-04-20 07:39:11 (4485): Guest Log:  *** Contents of shared directory: ***
2025-04-20 07:39:11 (4485): Guest Log: total 221484
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 root root 225309223 Apr 20 04:30 ATLAS.root_0
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 root root      9224 Apr 20 04:30 init_data.xml
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 root root    508888 Apr 20 04:30 input.tar.gz
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 root root    942080 Apr 20 06:39 result.tar.gz
2025-04-20 07:39:11 (4485): Guest Log: -rw-r--r--. 1 root root     17569 Apr 20 04:30 start_atlas.sh
2025-04-20 07:39:11 (4485): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-20 07:39:12 (4485): VM Completion File Detected.
2025-04-20 07:39:12 (4485): Powering off VM.
2025-04-20 07:39:13 (4485): Successfully stopped VM.
2025-04-20 07:39:13 (4485): Deregistering VM. (boinc_4e86ddca7c4dbc22, slot#1)
2025-04-20 07:39:13 (4485): Removing network bandwidth throttle group from VM.
2025-04-20 07:39:13 (4485): Removing VM from VirtualBox.
07:39:18 (4485): called boinc_finish(0)

</stderr_txt>
]]>

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