Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:43:50 (3569727): wrapper (7.7.26015): starting
07:43:50 (3569727): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 07:43:50] Arguments: --nthreads 8
[2025-04-19 07:43:50] Threads: 8
[2025-04-19 07:43:50] Checking for CVMFS
[2025-04-19 07:43:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 07:43:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 07:43:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 07:43:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 07:43:51] 2.12.6.0 4179490 115478 217084 145037 1 460 30571766 32935937 18178 130560 0 94047180 99.540 116697558 25637 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 07:43:51] CVMFS is ok
[2025-04-19 07:43:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 07:43:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 07:43:51] Further information can be found at the LHC@home message board.
[2025-04-19 07:43:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 07:43:51] Checking for apptainer binary...
[2025-04-19 07:43:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 07:43:51] Running /usr/bin/apptainer --version
[2025-04-19 07:43:51] apptainer version 1.4.0-1.el9
[2025-04-19 07:43:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 07:43:51] c6-4-5-3.aglt2.org
[2025-04-19 07:43:51] apptainer works
[2025-04-19 07:43:52] Set ATHENA_PROC_NUMBER=8
[2025-04-19 07:43:52] Set ATHENA_CORE_NUMBER=8
[2025-04-19 07:43:52] Starting ATLAS job with PandaID=6607611165
[2025-04-19 07:43:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:07:54]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:07:54] 2025-04-19 15:07:38,386 | INFO     | mean y: 2183170.929648241
[2025-04-19 11:07:54] 2025-04-19 15:07:38,386 | INFO     | -- intersect: -110279766853.4506
[2025-04-19 11:07:54] 2025-04-19 15:07:38,386 | INFO     | intersect: -110279766853.4506
[2025-04-19 11:07:54] 2025-04-19 15:07:38,387 | INFO     | chi2: 6.6691039768487546
[2025-04-19 11:07:54] 2025-04-19 15:07:38,387 | INFO     | sum of square deviations: 2263680258.0618486
[2025-04-19 11:07:54] 2025-04-19 15:07:38,392 | INFO     | sum of deviations: 165019676792.031
[2025-04-19 11:07:54] 2025-04-19 15:07:38,392 | INFO     | mean x: 1745068985.7319589
[2025-04-19 11:07:54] 2025-04-19 15:07:38,393 | INFO     | mean y: 2191958.3659793814
[2025-04-19 11:07:54] 2025-04-19 15:07:38,393 | INFO     | -- intersect: -127211321955.40746
[2025-04-19 11:07:54] 2025-04-19 15:07:38,393 | INFO     | intersect: -127211321955.40746
[2025-04-19 11:07:54] 2025-04-19 15:07:38,393 | INFO     | chi2: 5.700290465277737
[2025-04-19 11:07:54] 2025-04-19 15:07:38,393 | INFO     | current chi2=5.700290465277737 (change=14.526891692409864 %)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,393 | INFO     | right removable region: 193
[2025-04-19 11:07:54] 2025-04-19 15:07:38,393 | INFO     | sum of square deviations: 2263652808.0618486
[2025-04-19 11:07:54] 2025-04-19 15:07:38,395 | INFO     | sum of deviations: 105818607670.85567
[2025-04-19 11:07:54] 2025-04-19 15:07:38,395 | INFO     | mean x: 1745069290.7319589
[2025-04-19 11:07:54] 2025-04-19 15:07:38,395 | INFO     | mean y: 2224315.9587628865
[2025-04-19 11:07:54] 2025-04-19 15:07:38,395 | INFO     | -- intersect: -81574244467.93176
[2025-04-19 11:07:54] 2025-04-19 15:07:38,395 | INFO     | intersect: -81574244467.93176
[2025-04-19 11:07:54] 2025-04-19 15:07:38,395 | INFO     | chi2: 3.906308503280947
[2025-04-19 11:07:54] 2025-04-19 15:07:38,395 | INFO     | current chi2=3.906308503280947 (change=41.426786614193226 %)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,400 | INFO     | sum of square deviations: 2093059140.2857094
[2025-04-19 11:07:54] 2025-04-19 15:07:38,401 | INFO     | sum of deviations: 71249670564.28575
[2025-04-19 11:07:54] 2025-04-19 15:07:38,401 | INFO     | mean x: 1745069443.2380953
[2025-04-19 11:07:54] 2025-04-19 15:07:38,401 | INFO     | mean y: 2255206.3492063493
[2025-04-19 11:07:54] 2025-04-19 15:07:38,401 | INFO     | -- intersect: -59401523955.640274
[2025-04-19 11:07:54] 2025-04-19 15:07:38,401 | INFO     | intersect: -59401523955.640274
[2025-04-19 11:07:54] 2025-04-19 15:07:38,401 | INFO     | chi2: 2.706059589034591
[2025-04-19 11:07:54] 2025-04-19 15:07:38,401 | INFO     | current chi2=2.706059589034591 (change=30.7259120276408 %)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,402 | INFO     | sum of square deviations: 1931256334.9945643
[2025-04-19 11:07:54] 2025-04-19 15:07:38,403 | INFO     | sum of deviations: 39308707573.36413
[2025-04-19 11:07:54] 2025-04-19 15:07:38,403 | INFO     | mean x: 1745069595.7445652
[2025-04-19 11:07:54] 2025-04-19 15:07:38,403 | INFO     | mean y: 2285276.1141304346
[2025-04-19 11:07:54] 2025-04-19 15:07:38,403 | INFO     | -- intersect: -35516785492.13008
[2025-04-19 11:07:54] 2025-04-19 15:07:38,403 | INFO     | intersect: -35516785492.13008
[2025-04-19 11:07:54] 2025-04-19 15:07:38,403 | INFO     | chi2: 1.6178854773981022
[2025-04-19 11:07:54] 2025-04-19 15:07:38,403 | INFO     | current chi2=1.6178854773981022 (change=40.2124962822679 %)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,405 | INFO     | sum of square deviations: 1778045744.1452522
[2025-04-19 11:07:54] 2025-04-19 15:07:38,406 | INFO     | sum of deviations: 22996940593.52514
[2025-04-19 11:07:54] 2025-04-19 15:07:38,406 | INFO     | mean x: 1745069748.2346368
[2025-04-19 11:07:54] 2025-04-19 15:07:38,406 | INFO     | mean y: 2301491.4636871507
[2025-04-19 11:07:54] 2025-04-19 15:07:38,406 | INFO     | -- intersect: -22568133191.588768
[2025-04-19 11:07:54] 2025-04-19 15:07:38,406 | INFO     | intersect: -22568133191.588768
[2025-04-19 11:07:54] 2025-04-19 15:07:38,407 | INFO     | chi2: 1.3651104305029211
[2025-04-19 11:07:54] 2025-04-19 15:07:38,407 | INFO     | current chi2=1.3651104305029211 (change=15.623791079557506 %)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,407 | INFO     | left removable region: 40
[2025-04-19 11:07:54] 2025-04-19 15:07:38,407 | INFO     | sum of square deviations: 1110362410.23529
[2025-04-19 11:07:54] 2025-04-19 15:07:38,408 | INFO     | sum of deviations: -1279729603.7254903
[2025-04-19 11:07:54] 2025-04-19 15:07:38,408 | INFO     | mean x: 1745070175.1568627
[2025-04-19 11:07:54] 2025-04-19 15:07:38,408 | INFO     | mean y: 2360224.405228758
[2025-04-19 11:07:54] 2025-04-19 15:07:38,408 | INFO     | -- intersect: 2013611634.882495
[2025-04-19 11:07:54] 2025-04-19 15:07:38,408 | INFO     | intersect: 2013611634.882495
[2025-04-19 11:07:54] 2025-04-19 15:07:38,409 | INFO     | chi2: 0.018401105081681367
[2025-04-19 11:07:54] 2025-04-19 15:07:38,409 | INFO     | -- intersect: 2013611634.882495
[2025-04-19 11:07:54] 2025-04-19 15:07:38,409 | INFO     | current memory leak: -1.15 B/s (using 153 data points, chi2=0.02)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,422 | INFO     | ..............................
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | . Timing measurements:
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | . get job = 0 s
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | . initial setup = 3 s
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | . payload setup = 12 s
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | . stage-in = 0 s
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | . payload execution = 12134 s
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | . stage-out = 2 s
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | . log creation = 0 s
[2025-04-19 11:07:54] 2025-04-19 15:07:38,423 | INFO     | ..............................
[2025-04-19 11:07:54] 2025-04-19 15:07:38,523 | INFO     | 
[2025-04-19 11:07:54] 2025-04-19 15:07:38,523 | INFO     | job summary report
[2025-04-19 11:07:54] 2025-04-19 15:07:38,523 | INFO     | --------------------------------------------------
[2025-04-19 11:07:54] 2025-04-19 15:07:38,523 | INFO     | PanDA job id: 6607611165
[2025-04-19 11:07:54] 2025-04-19 15:07:38,523 | INFO     | task id: 44075483
[2025-04-19 11:07:54] 2025-04-19 15:07:38,523 | INFO     | errors: (none)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | pilot state: finished 
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | transexitcode: 0
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | exeerrorcode: 0
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | exeerrordiag: 
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | exitcode: 0
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | exitmsg: OK
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | cpuconsumptiontime: 37024 s
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | nevents: 400
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | neventsw: 0
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | pid: 3580895
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | pgrp: 3580895
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | corecount: 8
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | event service: False
[2025-04-19 11:07:54] 2025-04-19 15:07:38,524 | INFO     | sizes: {0: 2426602, 1: 2426630, 2: 2426829, 10: 2427035, 13: 2427063, 12150: 2456666, 12154: 2465607, 12157: 2465663, 12182: 2465833}
[2025-04-19 11:07:54] 2025-04-19 15:07:38,525 | INFO     | --------------------------------------------------
[2025-04-19 11:07:54] 2025-04-19 15:07:38,525 | INFO     | 
[2025-04-19 11:07:54] 2025-04-19 15:07:38,525 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | job 6607611165 has completed (purged errors)
[2025-04-19 11:07:54] 2025-04-19 15:07:38,614 | INFO     | overall cleanup function is called
[2025-04-19 11:07:54] 2025-04-19 15:07:39,626 | INFO     | --- collectZombieJob: --- 10, [3580895]
[2025-04-19 11:07:54] 2025-04-19 15:07:39,627 | INFO     | zombie collector waiting for pid 3580895
[2025-04-19 11:07:54] 2025-04-19 15:07:39,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:07:54] 2025-04-19 15:07:39,627 | INFO     | collected zombie processes
[2025-04-19 11:07:54] 2025-04-19 15:07:39,627 | INFO     | will attempt to kill all subprocesses of pid=3580895
[2025-04-19 11:07:54] 2025-04-19 15:07:39,977 | INFO     | process IDs to be killed: [3580895] (in reverse order)
[2025-04-19 11:07:54] 2025-04-19 15:07:40,162 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:07:54] 2025-04-19 15:07:40,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:07:54] 2025-04-19 15:07:40,178 | INFO     | did not find any defunct processes belonging to 3580895
[2025-04-19 11:07:54] 2025-04-19 15:07:40,189 | INFO     | did not find any defunct processes belonging to 3580895
[2025-04-19 11:07:54] 2025-04-19 15:07:40,190 | INFO     | ready for new job
[2025-04-19 11:07:54] 2025-04-19 15:07:40,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:07:54] 2025-04-19 15:07:40,191 | INFO     | **************************************
[2025-04-19 11:07:54] 2025-04-19 15:07:40,191 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:07:54] 2025-04-19 15:07:40,191 | INFO     | **************************************
[2025-04-19 11:07:54] 2025-04-19 15:07:40,192 | INFO     | 
[2025-04-19 11:07:54] 2025-04-19 15:07:40,207 | INFO     | architecture information:
[2025-04-19 11:07:54] 2025-04-19 15:07:40,208 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:07:54] 2025-04-19 15:07:40,224 | INFO     | cat /etc/os-release:
[2025-04-19 11:07:54] NAME="CentOS Linux"
[2025-04-19 11:07:54] VERSION="7 (Core)"
[2025-04-19 11:07:54] ID="centos"
[2025-04-19 11:07:54] ID_LIKE="rhel fedora"
[2025-04-19 11:07:54] VERSION_ID="7"
[2025-04-19 11:07:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:07:54] ANSI_COLOR="0;31"
[2025-04-19 11:07:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:07:54] HOME_URL="https://www.centos.org/"
[2025-04-19 11:07:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:07:54] 
[2025-04-19 11:07:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:07:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:07:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:07:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:07:54] 
[2025-04-19 11:07:54] 2025-04-19 15:07:40,225 | INFO     | **************************************
[2025-04-19 11:07:54] 2025-04-19 15:07:40,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 11:07:54] 2025-04-19 15:07:40,793 | INFO     | sufficient remaining disk space (74759274496 B)
[2025-04-19 11:07:54] 2025-04-19 15:07:40,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:07:54] 2025-04-19 15:07:40,793 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:07:54] 2025-04-19 15:07:40,793 | INFO     | update_server=False
[2025-04-19 11:07:54] 2025-04-19 15:07:40,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:07:54] 2025-04-19 15:07:40,795 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 11:07:54] 2025-04-19 15:07:40,795 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:07:54] 2025-04-19 15:07:40,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:07:54] 2025-04-19 15:07:40,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:07:54] 2025-04-19 15:07:41,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:07:54] 2025-04-19 15:07:41,126 | INFO     | all job control threads have been joined
[2025-04-19 11:07:54] 2025-04-19 15:07:41,275 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 11:07:54] 2025-04-19 15:07:41,276 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 11:07:54] 2025-04-19 15:07:41,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:07:54] 2025-04-19 15:07:41,276 | INFO     | will abort loop
[2025-04-19 11:07:54] 2025-04-19 15:07:41,492 | INFO     | all payload control threads have been joined
[2025-04-19 11:07:54] 2025-04-19 15:07:41,625 | INFO     | all data control threads have been joined
[2025-04-19 11:07:54] 2025-04-19 15:07:41,800 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:41,804 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:07:54] 2025-04-19 15:07:42,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,082 | INFO     | [job] validate thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,133 | INFO     | [job] control thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,317 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,498 | INFO     | [payload] control thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,560 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,600 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,632 | INFO     | [data] control thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,708 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,855 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:42,871 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:43,050 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:43,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:07:54] 2025-04-19 15:07:44,558 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:46,018 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:07:54] 2025-04-19 15:07:47,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081092605760)>', '<ExcThread(monitor, started 140080727439104)>']
[2025-04-19 11:07:54] 2025-04-19 15:07:48,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:07:54] 2025-04-19 15:07:48,847 | INFO     | [monitor] control thread has ended
[2025-04-19 11:07:54] 2025-04-19 15:07:52,966 | INFO     | all workflow threads have been joined
[2025-04-19 11:07:54] 2025-04-19 15:07:52,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:07:54] 2025-04-19 15:07:52,967 | INFO     | traces error code: 0
[2025-04-19 11:07:54] 2025-04-19 15:07:52,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:07:54] 2025-04-19 15:07:53,687 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:07:54] 2025-04-19 15:07:53,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:07:54] 2025-04-19 15:07:53,693 [wrapper] pilotpid: 3574320
[2025-04-19 11:07:54] 2025-04-19 15:07:53,695 [wrapper] Pilot exit status: 0
[2025-04-19 11:07:54] 2025-04-19 15:07:53,753 [wrapper] pandaids: 6607611165
[2025-04-19 11:07:54] 2025-04-19 15:07:53,894 [wrapper] cleanup supervisor_pilot  148955 3574321
[2025-04-19 11:07:54] 2025-04-19 15:07:53,897 [wrapper] Test setup, not cleaning
[2025-04-19 11:07:54] 2025-04-19 15:07:53,900 [wrapper] apfmon messages muted
[2025-04-19 11:07:54] 2025-04-19 15:07:53,902 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:07:54] 2025-04-19 15:07:53,924 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:07:54]  *** Error codes and diagnostics ***
[2025-04-19 11:07:54]     "exeErrorCode": 0,
[2025-04-19 11:07:54]     "exeErrorDiag": "",
[2025-04-19 11:07:54]     "pilotErrorCode": 0,
[2025-04-19 11:07:54]     "pilotErrorDiag": "",
[2025-04-19 11:07:54]  *** Listing of results directory ***
[2025-04-19 11:07:54] total 407372
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 04:36 pilot3.tar.gz
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 04:44 queuedata.json
[2025-04-19 11:07:54] -rwx------. 1 boincer umatlas     37140 Apr 19 04:45 runpilot2-wrapper.sh
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas       100 Apr 19 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:07:54] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 07:43 run_atlas
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas       105 Apr 19 07:43 job.xml
[2025-04-19 11:07:54] -rw-r--r--. 2 boincer umatlas 222249462 Apr 19 07:43 EVNT.44075481._003117.pool.root.1
[2025-04-19 11:07:54] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 07:43 start_atlas.sh
[2025-04-19 11:07:54] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 07:43 shared
[2025-04-19 11:07:54] -rw-r--r--. 2 boincer umatlas    508890 Apr 19 07:43 input.tar.gz
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas         0 Apr 19 07:43 boinc_lockfile
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 07:43 pandaJob.out
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas       467 Apr 19 07:43 setup.sh.local
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas    991292 Apr 19 07:44 agis_schedconf.cvmfs.json
[2025-04-19 11:07:54] drwx------. 4 boincer umatlas      4096 Apr 19 07:44 pilot3
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas      6855 Apr 19 11:01 init_data.xml
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas 188056085 Apr 19 11:06 HITS.44075483._080391.pool.root.1
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas       531 Apr 19 11:06 boinc_task_state.xml
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas        95 Apr 19 11:06 pilot_heartbeat.json
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas      1042 Apr 19 11:07 memory_monitor_summary.json
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas   1618536 Apr 19 11:07 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas    380002 Apr 19 11:07 log.44075483._080391.job.log.tgz.1
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas      7725 Apr 19 11:07 heartbeat.json
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas      4662 Apr 19 11:07 pilotlog.txt
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas        28 Apr 19 11:07 wrapper_checkpoint.txt
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 11:07 boinc_mmap_file
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas   1107825 Apr 19 11:07 log.44075483._080391.job.log.1
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas       357 Apr 19 11:07 output.list
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas       620 Apr 19 11:07 runtime_log
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas   1505280 Apr 19 11:07 result.tar.gz
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas     11419 Apr 19 11:07 runtime_log.err
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas       654 Apr 19 11:07 kb4MDm5zIQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPVhLDmYcHzXo.diag
[2025-04-19 11:07:54] -rw-r--r--. 1 boincer umatlas     20914 Apr 19 11:07 stderr.txt
[2025-04-19 11:07:54] HITS file was successfully produced:
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas 188056085 Apr 19 11:06 shared/HITS.pool.root.1
[2025-04-19 11:07:54]  *** Contents of shared directory: ***
[2025-04-19 11:07:54] total 402692
[2025-04-19 11:07:54] -rw-r--r--. 2 boincer umatlas 222249462 Apr 19 07:43 ATLAS.root_0
[2025-04-19 11:07:54] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 07:43 start_atlas.sh
[2025-04-19 11:07:54] -rw-r--r--. 2 boincer umatlas    508890 Apr 19 07:43 input.tar.gz
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas 188056085 Apr 19 11:06 HITS.pool.root.1
[2025-04-19 11:07:54] -rw-------. 1 boincer umatlas   1505280 Apr 19 11:07 result.tar.gz
11:07:56 (3569727): run_atlas exited; CPU time 37373.344255
11:07:56 (3569727): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN