Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:33:07 (2618450): wrapper (7.7.26015): starting
17:33:07 (2618450): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 17:33:07] Arguments: --nthreads 12
[2025-04-19 17:33:07] Threads: 12
[2025-04-19 17:33:07] Checking for CVMFS
[2025-04-19 17:33:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 17:33:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 17:33:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 17:33:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 17:33:07] 2.11.5.0 4278 2844 89536 145043 2 56 2729039 4097024 0 130560 0 3110920 99.994 777049 55184 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2025-04-19 17:33:07] CVMFS is ok
[2025-04-19 17:33:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 17:33:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 17:33:07] Further information can be found at the LHC@home message board.
[2025-04-19 17:33:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 17:33:07] Checking for apptainer binary...
[2025-04-19 17:33:07] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-04-19 17:33:07] apptainer is not installed, using version from CVMFS
[2025-04-19 17:33:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 17:33:07] pckelar2.cern.ch
[2025-04-19 17:33:07] apptainer works
[2025-04-19 17:33:07] Set ATHENA_PROC_NUMBER=12
[2025-04-19 17:33:07] Set ATHENA_CORE_NUMBER=12
[2025-04-19 17:33:07] Starting ATLAS job with PandaID=6607611087
[2025-04-19 17:33:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 18:39:45]  *** The last 200 lines of the pilot log: ***
[2025-04-19 18:39:45]  is_tar=False
[2025-04-19 18:39:45]  lfn=log.44075483._080337.job.log.tgz.1
[2025-04-19 18:39:45]  mtime=0
[2025-04-19 18:39:45]  protocol_id=None
[2025-04-19 18:39:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 18:39:45]  replicas=None
[2025-04-19 18:39:45]  scope=mc23_13p6TeV
[2025-04-19 18:39:45]  status=None
[2025-04-19 18:39:45]  status_code=0
[2025-04-19 18:39:45]  storage_token=
[2025-04-19 18:39:45]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6607611087/log.44075483._080337.job.log.tgz.1
[2025-04-19 18:39:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/7d/log.44075483._080337.job.log.tgz.1
[2025-04-19 18:39:45]  workdir=None
[2025-04-19 18:39:45] ]
[2025-04-19 18:39:45] 2025-04-19 16:39:27,504 | INFO     | transferring file log.44075483._080337.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6607611087/log.44075483._080337.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-19 18:39:45] 2025-04-19 16:39:27,504 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6607611087/log.44075483._080337.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._080337.job
[2025-04-19 18:39:45] 2025-04-19 16:39:27,519 | INFO     | adding to output.list: log.44075483._080337.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/7d/log.44075483._080337.job.log.tg
[2025-04-19 18:39:45] 2025-04-19 16:39:27,520 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 18:39:45] 2025-04-19 16:39:27,520 | INFO     | summary of transferred files:
[2025-04-19 18:39:45] 2025-04-19 16:39:27,520 | INFO     |  -- lfn=log.44075483._080337.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 18:39:45] 2025-04-19 16:39:27,520 | INFO     | stage-out finished correctly
[2025-04-19 18:39:45] 2025-04-19 16:39:27,665 | WARNING  | process 2629513 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 18:39:45] 2025-04-19 16:39:27,666 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6607611087/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 18:39:45] 2025-04-19 16:39:27,740 | INFO     | number of running child processes to parent process 2629513: 1
[2025-04-19 18:39:45] 2025-04-19 16:39:27,740 | INFO     | maximum number of monitored processes: 6
[2025-04-19 18:39:45] 2025-04-19 16:39:27,913 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 18:39:45] 2025-04-19 16:39:30,243 | INFO     | monitor loop #297: job 0:6607611087 is in state 'finished'
[2025-04-19 18:39:45] 2025-04-19 16:39:30,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:39:45] 2025-04-19 16:39:30,357 | INFO     | job 6607611087 has state=finished
[2025-04-19 18:39:45] 2025-04-19 16:39:30,357 | INFO     | preparing for final server update for job 6607611087 in state='finished'
[2025-04-19 18:39:45] 2025-04-19 16:39:30,357 | INFO     | this job has now completed (state=finished)
[2025-04-19 18:39:45] 2025-04-19 16:39:30,357 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 18:39:45] 2025-04-19 16:39:30,357 | INFO     | log transfer has been attempted: DONE
[2025-04-19 18:39:45] 2025-04-19 16:39:30,358 | INFO     | job 6607611087 has finished - writing final server update
[2025-04-19 18:39:45] 2025-04-19 16:39:30,358 | INFO     | total number of processed events: 400 (read)
[2025-04-19 18:39:45] 2025-04-19 16:39:30,371 | INFO     | executing command: lscpu
[2025-04-19 18:39:45] 2025-04-19 16:39:30,403 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 18:39:45] 2025-04-19 16:39:32,746 | INFO     | monitor loop #298: job 0:6607611087 is in state 'finished'
[2025-04-19 18:39:45] 2025-04-19 16:39:32,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 18:39:45] 2025-04-19 16:39:33,109 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 18:39:45] 2025-04-19 16:39:33,109 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6607611087/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 18:39:45] 2025-04-19 16:39:33,110 | INFO     | extracted standard info from prmon json
[2025-04-19 18:39:45] 2025-04-19 16:39:33,110 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 18:39:45] 2025-04-19 16:39:33,110 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 18:39:45] 2025-04-19 16:39:33,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 18:39:45] 2025-04-19 16:39:33,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 18:39:45] 2025-04-19 16:39:33,112 | INFO     | fitting pss+swap vs Time
[2025-04-19 18:39:45] 2025-04-19 16:39:33,112 | INFO     | sum of square deviations: 60482994.5
[2025-04-19 18:39:45] 2025-04-19 16:39:33,113 | INFO     | sum of deviations: -9149369290.500002
[2025-04-19 18:39:45] 2025-04-19 16:39:33,113 | INFO     | mean x: 1745078860.5
[2025-04-19 18:39:45] 2025-04-19 16:39:33,113 | INFO     | mean y: 2665620.224137931
[2025-04-19 18:39:45] 2025-04-19 16:39:33,113 | INFO     | -- intersect: 263983823758.144
[2025-04-19 18:39:45] 2025-04-19 16:39:33,113 | INFO     | intersect: 263983823758.144
[2025-04-19 18:39:45] 2025-04-19 16:39:33,113 | INFO     | chi2: 0.12637546407094452
[2025-04-19 18:39:45] 2025-04-19 16:39:33,113 | INFO     | -- intersect: 263983823758.144
[2025-04-19 18:39:45] 2025-04-19 16:39:33,113 | INFO     | current memory leak: -151.27 B/s (using 58 data points, chi2=0.13)
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | ..............................
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | . Timing measurements:
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | . get job = 0 s
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | . initial setup = 1 s
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | . payload setup = 5 s
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | . stage-in = 0 s
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | . payload execution = 3948 s
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | . stage-out = 0 s
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | . log creation = 0 s
[2025-04-19 18:39:45] 2025-04-19 16:39:33,114 | INFO     | ..............................
[2025-04-19 18:39:45] 2025-04-19 16:39:33,186 | INFO     | 
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | job summary report
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | --------------------------------------------------
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | PanDA job id: 6607611087
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | task id: 44075483
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | errors: (none)
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | pilot state: finished 
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | transexitcode: 0
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | exeerrorcode: 0
[2025-04-19 18:39:45] 2025-04-19 16:39:33,187 | INFO     | exeerrordiag: 
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | exitcode: 0
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | exitmsg: OK
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | cpuconsumptiontime: 43526 s
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | nevents: 400
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | neventsw: 0
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | pid: 2629513
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | pgrp: 2629513
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | corecount: 12
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | event service: False
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | sizes: {0: 2426653, 1: 2426852, 3: 2427058, 11: 2427086, 3957: 2452910, 3959: 2461851, 3960: 2462035, 3965: 2462205}
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | --------------------------------------------------
[2025-04-19 18:39:45] 2025-04-19 16:39:33,188 | INFO     | 
[2025-04-19 18:39:45] 2025-04-19 16:39:33,189 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-19 18:39:45] 2025-04-19 16:39:33,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,208 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,208 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 18:39:45] 2025-04-19 16:39:33,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 18:39:45] 2025-04-19 16:39:33,210 | INFO     | job 6607611087 has completed (purged errors)
[2025-04-19 18:39:45] 2025-04-19 16:39:33,210 | INFO     | overall cleanup function is called
[2025-04-19 18:39:45] 2025-04-19 16:39:34,217 | INFO     | --- collectZombieJob: --- 10, [2629513]
[2025-04-19 18:39:45] 2025-04-19 16:39:34,217 | INFO     | zombie collector waiting for pid 2629513
[2025-04-19 18:39:45] 2025-04-19 16:39:34,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 18:39:45] 2025-04-19 16:39:34,217 | INFO     | collected zombie processes
[2025-04-19 18:39:45] 2025-04-19 16:39:34,217 | INFO     | will attempt to kill all subprocesses of pid=2629513
[2025-04-19 18:39:45] 2025-04-19 16:39:34,299 | INFO     | process IDs to be killed: [2629513] (in reverse order)
[2025-04-19 18:39:45] 2025-04-19 16:39:34,330 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 18:39:45] 2025-04-19 16:39:34,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 18:39:45] 2025-04-19 16:39:34,332 | INFO     | did not find any defunct processes belonging to 2629513
[2025-04-19 18:39:45] 2025-04-19 16:39:34,334 | INFO     | did not find any defunct processes belonging to 2629513
[2025-04-19 18:39:45] 2025-04-19 16:39:34,335 | INFO     | ready for new job
[2025-04-19 18:39:45] 2025-04-19 16:39:34,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 18:39:45] 2025-04-19 16:39:34,336 | INFO     | **************************************
[2025-04-19 18:39:45] 2025-04-19 16:39:34,336 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 18:39:45] 2025-04-19 16:39:34,336 | INFO     | **************************************
[2025-04-19 18:39:45] 2025-04-19 16:39:34,336 | INFO     | 
[2025-04-19 18:39:45] 2025-04-19 16:39:34,348 | INFO     | architecture information:
[2025-04-19 18:39:45] 2025-04-19 16:39:34,348 | INFO     | executing command: cat /etc/os-release
[2025-04-19 18:39:45] 2025-04-19 16:39:34,355 | INFO     | cat /etc/os-release:
[2025-04-19 18:39:45] NAME="CentOS Linux"
[2025-04-19 18:39:45] VERSION="7 (Core)"
[2025-04-19 18:39:45] ID="centos"
[2025-04-19 18:39:45] ID_LIKE="rhel fedora"
[2025-04-19 18:39:45] VERSION_ID="7"
[2025-04-19 18:39:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 18:39:45] ANSI_COLOR="0;31"
[2025-04-19 18:39:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 18:39:45] HOME_URL="https://www.centos.org/"
[2025-04-19 18:39:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 18:39:45] 
[2025-04-19 18:39:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 18:39:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 18:39:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 18:39:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 18:39:45] 
[2025-04-19 18:39:45] 2025-04-19 16:39:34,355 | INFO     | **************************************
[2025-04-19 18:39:45] 2025-04-19 16:39:34,858 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-19 18:39:45] 2025-04-19 16:39:34,870 | INFO     | sufficient remaining disk space (226595176448 B)
[2025-04-19 18:39:45] 2025-04-19 16:39:34,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 18:39:45] 2025-04-19 16:39:34,871 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 18:39:45] 2025-04-19 16:39:34,871 | INFO     | update_server=False
[2025-04-19 18:39:45] 2025-04-19 16:39:34,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 18:39:45] 2025-04-19 16:39:34,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:39:45] 2025-04-19 16:39:34,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 18:39:45] 2025-04-19 16:39:35,155 | INFO     | all data control threads have been joined
[2025-04-19 18:39:45] 2025-04-19 16:39:35,249 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 18:39:45] 2025-04-19 16:39:35,249 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 18:39:45] 2025-04-19 16:39:35,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 18:39:45] 2025-04-19 16:39:35,250 | INFO     | will abort loop
[2025-04-19 18:39:45] 2025-04-19 16:39:35,578 | INFO     | all job control threads have been joined
[2025-04-19 18:39:45] 2025-04-19 16:39:35,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 18:39:45] 2025-04-19 16:39:35,604 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 18:39:45] 2025-04-19 16:39:35,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 18:39:45] 2025-04-19 16:39:35,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 18:39:45] 2025-04-19 16:39:35,876 | INFO     | [job] retrieve thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:35,877 | INFO     | [job] queue monitor thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,135 | INFO     | [payload] validate_post thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,160 | INFO     | [data] control thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,255 | INFO     | [job] job monitor thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,268 | INFO     | all payload control threads have been joined
[2025-04-19 18:39:45] 2025-04-19 16:39:36,451 | INFO     | [job] validate thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,501 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,525 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,583 | INFO     | [job] control thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,630 | INFO     | [payload] failed_post thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,635 | INFO     | [data] copytool_in thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:36,972 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:37,273 | INFO     | [payload] control thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:37,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:37,604 | INFO     | [data] copytool_out thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:38,877 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 18:39:45] 2025-04-19 16:39:40,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467963184960)>', '<ExcThread(monitor, started 140467408713472)>']
[2025-04-19 18:39:45] 2025-04-19 16:39:40,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 18:39:45] 2025-04-19 16:39:40,630 | INFO     | [monitor] control thread has ended
[2025-04-19 18:39:45] 2025-04-19 16:39:45,473 | INFO     | all workflow threads have been joined
[2025-04-19 18:39:45] 2025-04-19 16:39:45,473 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 18:39:45] 2025-04-19 16:39:45,473 | INFO     | traces error code: 0
[2025-04-19 18:39:45] 2025-04-19 16:39:45,473 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 18:39:45] 2025-04-19 16:39:45,559 [wrapper] ==== pilot stdout END ====
[2025-04-19 18:39:45] 2025-04-19 16:39:45,562 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 18:39:45] 2025-04-19 16:39:45,564 [wrapper] pilotpid: 2622181
[2025-04-19 18:39:45] 2025-04-19 16:39:45,567 [wrapper] Pilot exit status: 0
[2025-04-19 18:39:45] 2025-04-19 16:39:45,575 [wrapper] pandaids: 6607611087
[2025-04-19 18:39:45] 2025-04-19 16:39:45,595 [wrapper] cleanup supervisor_pilot 2670617 2622182
[2025-04-19 18:39:45] 2025-04-19 16:39:45,597 [wrapper] Test setup, not cleaning
[2025-04-19 18:39:45] 2025-04-19 16:39:45,599 [wrapper] apfmon messages muted
[2025-04-19 18:39:45] 2025-04-19 16:39:45,601 [wrapper] ==== wrapper stdout END ====
[2025-04-19 18:39:45] 2025-04-19 16:39:45,603 [wrapper] ==== wrapper stderr END ====
[2025-04-19 18:39:45]  *** Error codes and diagnostics ***
[2025-04-19 18:39:45]     "exeErrorCode": 0,
[2025-04-19 18:39:45]     "exeErrorDiag": "",
[2025-04-19 18:39:45]     "pilotErrorCode": 0,
[2025-04-19 18:39:45]     "pilotErrorDiag": "",
[2025-04-19 18:39:45]  *** Listing of results directory ***
[2025-04-19 18:39:45] total 419580
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc      5111 Apr 19 10:36 queuedata.json
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc    495897 Apr 19 10:36 pilot3.tar.gz
[2025-04-19 18:39:45] -rwx------ 1 boinc boinc     37140 Apr 19 10:36 runpilot2-wrapper.sh
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc       100 Apr 19 17:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 18:39:45] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 17:33 run_atlas
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc       105 Apr 19 17:33 job.xml
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc      6259 Apr 19 17:33 init_data.xml
[2025-04-19 18:39:45] -rw-r--r-- 2 boinc boinc 227632447 Apr 19 17:33 EVNT.44075481._003115.pool.root.1
[2025-04-19 18:39:45] -rw-r--r-- 2 boinc boinc     17569 Apr 19 17:33 start_atlas.sh
[2025-04-19 18:39:45] drwxrwx--x 2 boinc boinc        68 Apr 19 17:33 shared
[2025-04-19 18:39:45] -rw-r--r-- 2 boinc boinc    508883 Apr 19 17:33 input.tar.gz
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc         0 Apr 19 17:33 boinc_lockfile
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc      2579 Apr 19 17:33 pandaJob.out
[2025-04-19 18:39:45] -rw------- 1 boinc boinc       124 Apr 19 17:33 setup.sh.local
[2025-04-19 18:39:45] -rw------- 1 boinc boinc    991300 Apr 19 17:33 agis_schedconf.cvmfs.json
[2025-04-19 18:39:45] -rw------- 1 boinc boinc   1618536 Apr 19 17:33 agis_ddmendpoints.agis.ALL.json
[2025-04-19 18:39:45] drwx------ 4 boinc boinc      4096 Apr 19 17:33 pilot3
[2025-04-19 18:39:45] -rw------- 1 boinc boinc 196677929 Apr 19 18:38 HITS.44075483._080337.pool.root.1
[2025-04-19 18:39:45] -rw------- 1 boinc boinc        95 Apr 19 18:39 pilot_heartbeat.json
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc       530 Apr 19 18:39 boinc_task_state.xml
[2025-04-19 18:39:45] -rw------- 1 boinc boinc      1018 Apr 19 18:39 memory_monitor_summary.json
[2025-04-19 18:39:45] -rw------- 1 boinc boinc    353341 Apr 19 18:39 log.44075483._080337.job.log.tgz.1
[2025-04-19 18:39:45] -rw------- 1 boinc boinc      7694 Apr 19 18:39 heartbeat.json
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc        27 Apr 19 18:39 wrapper_checkpoint.txt
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc      8192 Apr 19 18:39 boinc_mmap_file
[2025-04-19 18:39:45] -rw------- 1 boinc boinc      4540 Apr 19 18:39 pilotlog.txt
[2025-04-19 18:39:45] -rw------- 1 boinc boinc    389392 Apr 19 18:39 log.44075483._080337.job.log.1
[2025-04-19 18:39:45] -rw------- 1 boinc boinc       357 Apr 19 18:39 output.list
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc       620 Apr 19 18:39 runtime_log
[2025-04-19 18:39:45] -rw------- 1 boinc boinc    757760 Apr 19 18:39 result.tar.gz
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc      9837 Apr 19 18:39 runtime_log.err
[2025-04-19 18:39:45] -rw------- 1 boinc boinc       656 Apr 19 18:39 HrtLDm7rIQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDUhLDm91vzPo.diag
[2025-04-19 18:39:45] -rw-r--r-- 1 boinc boinc     21602 Apr 19 18:39 stderr.txt
[2025-04-19 18:39:45] HITS file was successfully produced:
[2025-04-19 18:39:45] -rw------- 1 boinc boinc 196677929 Apr 19 18:38 shared/HITS.pool.root.1
[2025-04-19 18:39:45]  *** Contents of shared directory: ***
[2025-04-19 18:39:45] total 415632
[2025-04-19 18:39:45] -rw-r--r-- 2 boinc boinc 227632447 Apr 19 17:33 ATLAS.root_0
[2025-04-19 18:39:45] -rw-r--r-- 2 boinc boinc     17569 Apr 19 17:33 start_atlas.sh
[2025-04-19 18:39:45] -rw-r--r-- 2 boinc boinc    508883 Apr 19 17:33 input.tar.gz
[2025-04-19 18:39:45] -rw------- 1 boinc boinc 196677929 Apr 19 18:38 HITS.pool.root.1
[2025-04-19 18:39:45] -rw------- 1 boinc boinc    757760 Apr 19 18:39 result.tar.gz
18:39:47 (2618450): run_atlas exited; CPU time 43548.159197
18:39:47 (2618450): called boinc_finish(0)

</stderr_txt>
]]>

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