Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 13:31:37 (10708): Detected: vboxwrapper 26206
2025-04-19 13:31:37 (10708): Detected: BOINC client v8.0.2
2025-04-19 13:31:38 (10708): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-04-19 13:31:38 (10708): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 13:31:39 (10708): Create VM. (boinc_791f5830cf6b20cc, slot#0)
2025-04-19 13:31:39 (10708): Setting Memory Size for VM. (4200MB)
2025-04-19 13:31:40 (10708): Setting CPU Count for VM. (2)
2025-04-19 13:31:40 (10708): Setting Chipset Options for VM.
2025-04-19 13:31:40 (10708): Setting Graphics Controller Options for VM.
2025-04-19 13:31:40 (10708): Setting Boot Options for VM.
2025-04-19 13:31:41 (10708): Setting Network Configuration for NAT.
2025-04-19 13:31:41 (10708): Enabling VM Network Access.
2025-04-19 13:31:41 (10708): Disabling USB Support for VM.
2025-04-19 13:31:41 (10708): Disabling COM Port Support for VM.
2025-04-19 13:31:42 (10708): Disabling LPT Port Support for VM.
2025-04-19 13:31:42 (10708): Disabling Audio Support for VM.
2025-04-19 13:31:42 (10708): Disabling Clipboard Support for VM.
2025-04-19 13:31:43 (10708): Disabling Drag and Drop Support for VM.
2025-04-19 13:31:43 (10708): Adding storage controller(s) to VM.
2025-04-19 13:31:43 (10708): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 13:31:46 (10708): Adding VirtualBox Guest Additions to VM.
2025-04-19 13:31:46 (10708): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 13:31:47 (10708): forwarding host port 52609 to guest port 80
2025-04-19 13:31:47 (10708): Enabling remote desktop for VM.
2025-04-19 13:31:47 (10708): Required extension pack not installed, remote desktop not enabled.
2025-04-19 13:31:47 (10708): Enabling shared directory for VM.
2025-04-19 13:31:48 (10708): Starting VM using VBoxManage interface. (boinc_791f5830cf6b20cc, slot#0)
2025-04-19 13:31:53 (10708): Successfully started VM. (PID = '13572')
2025-04-19 13:31:53 (10708): Reporting VM Process ID to BOINC.
2025-04-19 13:31:53 (10708): Guest Log: BIOS: VirtualBox 7.0.22
2025-04-19 13:31:53 (10708): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 13:31:53 (10708): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 13:31:53 (10708): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 13:31:53 (10708): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 13:31:53 (10708): Detected: Web Application Enabled (http://localhost:52609)
2025-04-19 13:31:53 (10708): Preference change detected
2025-04-19 13:31:53 (10708): Setting CPU throttle for VM. (75%)
2025-04-19 13:31:54 (10708): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 13:31:55 (10708): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 13:31:55 (10708): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 13:31:58 (10708): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 13:31:58 (10708): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 13:31:58 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 13:31:59 (10708): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 13:32:04 (10708): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 13:32:04 (10708): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 13:32:14 (10708): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 13:32:14 (10708): Guest Log: 00:00:00.000271 main     Log opened 2025-04-19T13:32:11.721333000Z
2025-04-19 13:32:14 (10708): Guest Log: 00:00:00.000363 main     OS Product: Linux
2025-04-19 13:32:14 (10708): Guest Log: 00:00:00.000381 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 13:32:14 (10708): Guest Log: 00:00:00.000396 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 13:32:14 (10708): Guest Log: 00:00:00.000412 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 13:32:14 (10708): Guest Log: 00:00:00.000412 main     Process ID: 1262
2025-04-19 13:32:14 (10708): Guest Log: 00:00:00.000412 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 13:32:14 (10708): Guest Log: 00:00:00.003520 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 13:32:14 (10708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 13:32:14 (10708): Guest Log: [INFO] Mounting shared directory
2025-04-19 13:32:14 (10708): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 13:32:24 (10708): Guest Log: 00:00:10.011764 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 227 740 000ns (GuestNow=1 745 062 343 504 519 000 ns GuestLast=1 745 069 531 732 259 000 ns fSetTimeLastLoop=true )
2025-04-19 13:32:29 (10708): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 13:32:29 (10708): Guest Log: [INFO] Detected branch: prod
2025-04-19 13:32:29 (10708): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 13:32:29 (10708): Guest Log: Copying input files
2025-04-19 13:32:31 (10708): Guest Log: Copied input files into RunAtlas.
2025-04-19 13:32:31 (10708): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 13:32:31 (10708): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 13:32:31 (10708): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 13:32:31 (10708): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 13:32:40 (10708): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 13:32:40 (10708): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 13:32:40 (10708): Guest Log: 2.6.3.0 1538 0 32176 145037 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 13:32:41 (10708): Guest Log: copied the webapp to /var/www
2025-04-19 13:32:41 (10708): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-19 13:32:41 (10708): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-19 13:32:42 (10708): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 13:32:42 (10708): Guest Log:  *** Starting ATLAS job. (PandaID=6607611035 taskID=44075483) ***
2025-04-19 15:11:58 (10708): Status Report: Elapsed Time: '6000.000000'
2025-04-19 15:11:58 (10708): Status Report: CPU Time: '7690.000000'
2025-04-19 16:21:27 (10708): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 16:21:47 (10708): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 16:21:57 (10708): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 16:22:17 (10708): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 16:52:46 (10708): Status Report: Elapsed Time: '12000.000000'
2025-04-19 16:52:46 (10708): Status Report: CPU Time: '16718.578125'
2025-04-19 18:32:48 (10708): Status Report: Elapsed Time: '18000.000000'
2025-04-19 18:32:48 (10708): Status Report: CPU Time: '25734.812500'
2025-04-19 18:59:24 (10708): Guest Log:  *** Job finished ***
2025-04-19 18:59:24 (10708): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:37,018 | INFO     | [data] queue_monitor thread has finished
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:43,676 | INFO     | job.realtimelogging is not enabled
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:44,679 | INFO     | [payload] run_realtimelog thread has finished
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:44,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945669769024)>', '<ExcThread(monitor, started 139945217857280)>']
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:45,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:45,102 | INFO     | [monitor] control thread has ended
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:49,953 | INFO     | all workflow threads have been joined
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:49,953 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:49,953 | INFO     | traces error code: 0
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:49,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,047 [wrapper] ==== pilot stdout END ====
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,051 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,055 [wrapper] pilotpid: 5841
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,059 [wrapper] Pilot exit status: 0
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,144 [wrapper] pandaids: 6607611035
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,165 [wrapper] cleanup supervisor_pilot 21064 5842
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,171 [wrapper] Test setup, not cleaning
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,177 [wrapper] apfmon messages muted
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,184 [wrapper] ==== wrapper stdout END ====
2025-04-19 18:59:24 (10708): Guest Log: 2025-04-19 16:58:50,192 [wrapper] ==== wrapper stderr END ====
2025-04-19 18:59:24 (10708): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 18:59:24 (10708): Guest Log:     "exeErrorCode": 0,
2025-04-19 18:59:24 (10708): Guest Log:     "exeErrorDiag": "",
2025-04-19 18:59:24 (10708): Guest Log:     "pilotErrorCode": 0,
2025-04-19 18:59:24 (10708): Guest Log:     "pilotErrorDiag": "",
2025-04-19 18:59:24 (10708): Guest Log:  *** Listing of results directory ***
2025-04-19 18:59:24 (10708): Guest Log: total 194908
2025-04-19 18:59:24 (10708): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 19 08:36 runpilot2-wrapper.sh
2025-04-19 18:59:24 (10708): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 19 08:36 queuedata.json
2025-04-19 18:59:24 (10708): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 19 08:36 pilot3.tar.gz
2025-04-19 18:59:24 (10708): Guest Log: -rwxr-xr-x. 1 atlas atlas     12239 Apr 19 11:32 init_data.xml
2025-04-19 18:59:24 (10708): Guest Log: -rwxr-xr-x. 1 atlas atlas    508882 Apr 19 11:32 input.tar.gz
2025-04-19 18:59:24 (10708): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 11:32 start_atlas.sh
2025-04-19 18:59:24 (10708): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 11:32 EVNT.44075481._003113.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 18:59:24 (10708): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 19 11:32 pandaJob.out
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 11:32 setup.sh.local
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 19 11:33 agis_schedconf.cvmfs.json
2025-04-19 18:59:24 (10708): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 11:33 pilot3
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas 191950207 Apr 19 16:56 HITS.44075483._080285.pool.root.1
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas      1036 Apr 19 16:57 memory_monitor_summary.json
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 16:57 agis_ddmendpoints.agis.ALL.json
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas    328452 Apr 19 16:57 log.44075483._080285.job.log.tgz.1
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas        95 Apr 19 16:57 pilot_heartbeat.json
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas      7745 Apr 19 16:58 heartbeat.json
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 19 16:58 pilotlog.txt
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas   1585839 Apr 19 16:58 log.44075483._080285.job.log.1
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 16:58 output.list
2025-04-19 18:59:24 (10708): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 16:58 runtime_log
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas   1935360 Apr 19 16:58 result.tar.gz
2025-04-19 18:59:24 (10708): Guest Log: -rw-r--r--. 1 atlas atlas     10960 Apr 19 16:58 runtime_log.err
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas       664 Apr 19 16:58 COHODmHrIQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmhJ6KDmuiNVMo.diag
2025-04-19 18:59:24 (10708): Guest Log: Looking for outputfile HITS.44075483._080285.pool.root.1
2025-04-19 18:59:24 (10708): Guest Log: HITS file was successfully produced
2025-04-19 18:59:24 (10708): Guest Log: -rw-------. 1 atlas atlas 191950207 Apr 19 16:56 /home/atlas/RunAtlas/HITS.44075483._080285.pool.root.1
2025-04-19 18:59:24 (10708): Guest Log: Successfully finished the ATLAS job!
2025-04-19 18:59:24 (10708): Guest Log: Copying the results back to the shared directory!
2025-04-19 18:59:25 (10708): Guest Log:  *** Contents of shared directory: ***
2025-04-19 18:59:25 (10708): Guest Log: total 407720
2025-04-19 18:59:25 (10708): Guest Log: -rwxrwxrwx. 1 root root 223069172 Apr 19 11:31 ATLAS.root_0
2025-04-19 18:59:25 (10708): Guest Log: -rwxrwxrwx. 1 root root 191950207 Apr 19  2025 HITS.pool.root.1
2025-04-19 18:59:25 (10708): Guest Log: -rwxrwxrwx. 1 root root     12239 Apr 19 11:31 init_data.xml
2025-04-19 18:59:25 (10708): Guest Log: -rwxrwxrwx. 1 root root    508882 Apr 19 11:31 input.tar.gz
2025-04-19 18:59:25 (10708): Guest Log: -rwxrwxrwx. 1 root root   1935360 Apr 19  2025 result.tar.gz
2025-04-19 18:59:25 (10708): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 19 11:31 start_atlas.sh
2025-04-19 18:59:25 (10708): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 18:59:25 (10708): VM Completion File Detected.
2025-04-19 18:59:25 (10708): Powering off VM.
2025-04-19 18:59:26 (10708): Successfully stopped VM.
2025-04-19 18:59:26 (10708): Deregistering VM. (boinc_791f5830cf6b20cc, slot#0)
2025-04-19 18:59:26 (10708): Removing network bandwidth throttle group from VM.
2025-04-19 18:59:26 (10708): Removing VM from VirtualBox.
18:59:31 (10708): called boinc_finish(0)

</stderr_txt>
]]>

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