Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:01:49 (595852): wrapper (7.7.26015): starting
11:01:49 (595852): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 11:01:49] Arguments: --nthreads 9
[2025-04-19 11:01:49] Threads: 9
[2025-04-19 11:01:49] Checking for CVMFS
[2025-04-19 11:01:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 11:01:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 11:01:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 11:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 11:01:51] 2.12.6.0 1907911 97256 210788 145041 3 237 30089680 32935937 14020 130560 0 64363609 99.454 99310991 30810 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 11:01:51] CVMFS is ok
[2025-04-19 11:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 11:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 11:01:51] Further information can be found at the LHC@home message board.
[2025-04-19 11:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 11:01:51] Checking for apptainer binary...
[2025-04-19 11:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 11:01:51] Running /usr/bin/apptainer --version
[2025-04-19 11:01:52] apptainer version 1.4.0-1.el9
[2025-04-19 11:01:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 11:01:53] c6-2-29-2.aglt2.org
[2025-04-19 11:01:53] apptainer works
[2025-04-19 11:01:53] Set ATHENA_PROC_NUMBER=9
[2025-04-19 11:01:53] Set ATHENA_CORE_NUMBER=9
[2025-04-19 11:01:54] Starting ATLAS job with PandaID=6607611019
[2025-04-19 11:01:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 13:32:02]  *** The last 200 lines of the pilot log: ***
[2025-04-19 13:32:02] 2025-04-19 17:31:50,402 | INFO     | mean y: 2172160.6043165466
[2025-04-19 13:32:02] 2025-04-19 17:31:50,402 | INFO     | -- intersect: -230186098145.85223
[2025-04-19 13:32:02] 2025-04-19 17:31:50,402 | INFO     | intersect: -230186098145.85223
[2025-04-19 13:32:02] 2025-04-19 17:31:50,402 | INFO     | chi2: 6.612087190458877
[2025-04-19 13:32:02] 2025-04-19 17:31:50,402 | INFO     | current chi2=6.612087190458877 (change=12.077359418928294 %)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,402 | INFO     | right removable region: 138
[2025-04-19 13:32:02] 2025-04-19 17:31:50,402 | INFO     | sum of square deviations: 832711021.7553964
[2025-04-19 13:32:02] 2025-04-19 17:31:50,403 | INFO     | sum of deviations: 68311064064.75534
[2025-04-19 13:32:02] 2025-04-19 17:31:50,403 | INFO     | mean x: 1745079666.1942446
[2025-04-19 13:32:02] 2025-04-19 17:31:50,403 | INFO     | mean y: 2224788.194244604
[2025-04-19 13:32:02] 2025-04-19 17:31:50,403 | INFO     | -- intersect: -143154579626.61942
[2025-04-19 13:32:02] 2025-04-19 17:31:50,403 | INFO     | intersect: -143154579626.61942
[2025-04-19 13:32:02] 2025-04-19 17:31:50,404 | INFO     | chi2: 4.359134958093867
[2025-04-19 13:32:02] 2025-04-19 17:31:50,404 | INFO     | current chi2=4.359134958093867 (change=42.03545036158642 %)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,404 | INFO     | sum of square deviations: 746031394.0596994
[2025-04-19 13:32:02] 2025-04-19 17:31:50,404 | INFO     | sum of deviations: 42353393841.17913
[2025-04-19 13:32:02] 2025-04-19 17:31:50,404 | INFO     | mean x: 1745079818.7014925
[2025-04-19 13:32:02] 2025-04-19 17:31:50,404 | INFO     | mean y: 2270399.104477612
[2025-04-19 13:32:02] 2025-04-19 17:31:50,405 | INFO     | -- intersect: -99068698241.45023
[2025-04-19 13:32:02] 2025-04-19 17:31:50,405 | INFO     | intersect: -99068698241.45023
[2025-04-19 13:32:02] 2025-04-19 17:31:50,405 | INFO     | chi2: 2.9930071068994275
[2025-04-19 13:32:02] 2025-04-19 17:31:50,405 | INFO     | current chi2=2.9930071068994275 (change=31.339425466923625 %)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,405 | INFO     | sum of square deviations: 665601154.1550406
[2025-04-19 13:32:02] 2025-04-19 17:31:50,406 | INFO     | sum of deviations: 18901356966.496136
[2025-04-19 13:32:02] 2025-04-19 17:31:50,406 | INFO     | mean x: 1745079971.1937985
[2025-04-19 13:32:02] 2025-04-19 17:31:50,406 | INFO     | mean y: 2314896.620155039
[2025-04-19 13:32:02] 2025-04-19 17:31:50,406 | INFO     | -- intersect: -49553457752.97717
[2025-04-19 13:32:02] 2025-04-19 17:31:50,406 | INFO     | intersect: -49553457752.97717
[2025-04-19 13:32:02] 2025-04-19 17:31:50,406 | INFO     | chi2: 1.794414400942461
[2025-04-19 13:32:02] 2025-04-19 17:31:50,406 | INFO     | current chi2=1.794414400942461 (change=40.04643701627008 %)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,406 | INFO     | sum of square deviations: 591163036.3548379
[2025-04-19 13:32:02] 2025-04-19 17:31:50,407 | INFO     | sum of deviations: 1562650212.4516106
[2025-04-19 13:32:02] 2025-04-19 17:31:50,407 | INFO     | mean x: 1745080123.6935484
[2025-04-19 13:32:02] 2025-04-19 17:31:50,407 | INFO     | mean y: 2350277.564516129
[2025-04-19 13:32:02] 2025-04-19 17:31:50,407 | INFO     | -- intersect: -4610505497.129066
[2025-04-19 13:32:02] 2025-04-19 17:31:50,407 | INFO     | intersect: -4610505497.129066
[2025-04-19 13:32:02] 2025-04-19 17:31:50,407 | INFO     | chi2: 1.0719370023128878
[2025-04-19 13:32:02] 2025-04-19 17:31:50,407 | INFO     | current chi2=1.0719370023128878 (change=40.2625724721176 %)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,407 | INFO     | sum of square deviations: 522484661.15966475
[2025-04-19 13:32:02] 2025-04-19 17:31:50,408 | INFO     | sum of deviations: -6847532093.453781
[2025-04-19 13:32:02] 2025-04-19 17:31:50,408 | INFO     | mean x: 1745080276.2016807
[2025-04-19 13:32:02] 2025-04-19 17:31:50,408 | INFO     | mean y: 2368913.268907563
[2025-04-19 13:32:02] 2025-04-19 17:31:50,408 | INFO     | -- intersect: 22872883753.689426
[2025-04-19 13:32:02] 2025-04-19 17:31:50,408 | INFO     | intersect: 22872883753.689426
[2025-04-19 13:32:02] 2025-04-19 17:31:50,409 | INFO     | chi2: 0.8868423135088706
[2025-04-19 13:32:02] 2025-04-19 17:31:50,409 | INFO     | current chi2=0.8868423135088706 (change=17.267310336768276 %)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,409 | INFO     | left removable region: 50
[2025-04-19 13:32:02] 2025-04-19 17:31:50,409 | INFO     | sum of square deviations: 211292849.44318137
[2025-04-19 13:32:02] 2025-04-19 17:31:50,410 | INFO     | sum of deviations: -1066153164.3522729
[2025-04-19 13:32:02] 2025-04-19 17:31:50,410 | INFO     | mean x: 1745080855.6704545
[2025-04-19 13:32:02] 2025-04-19 17:31:50,410 | INFO     | mean y: 2390267.0568181816
[2025-04-19 13:32:02] 2025-04-19 17:31:50,410 | INFO     | -- intersect: 8807815917.885286
[2025-04-19 13:32:02] 2025-04-19 17:31:50,410 | INFO     | intersect: 8807815917.885286
[2025-04-19 13:32:02] 2025-04-19 17:31:50,410 | INFO     | chi2: 0.0055757382062428034
[2025-04-19 13:32:02] 2025-04-19 17:31:50,410 | INFO     | -- intersect: 8807815917.885286
[2025-04-19 13:32:02] 2025-04-19 17:31:50,410 | INFO     | current memory leak: -5.05 B/s (using 88 data points, chi2=0.01)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | ..............................
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | . Timing measurements:
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | . get job = 0 s
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | . initial setup = 8 s
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | . payload setup = 51 s
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | . stage-in = 0 s
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | . payload execution = 8773 s
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | . stage-out = 0 s
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | . log creation = 0 s
[2025-04-19 13:32:02] 2025-04-19 17:31:50,411 | INFO     | ..............................
[2025-04-19 13:32:02] 2025-04-19 17:31:50,601 | INFO     | 
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | job summary report
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | --------------------------------------------------
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | PanDA job id: 6607611019
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | task id: 44075483
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | errors: (none)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | pilot state: finished 
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | transexitcode: 0
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | exeerrorcode: 0
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | exeerrordiag: 
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | exitcode: 0
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | exitmsg: OK
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | cpuconsumptiontime: 38432 s
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | nevents: 400
[2025-04-19 13:32:02] 2025-04-19 17:31:50,602 | INFO     | neventsw: 0
[2025-04-19 13:32:02] 2025-04-19 17:31:50,603 | INFO     | pid: 612146
[2025-04-19 13:32:02] 2025-04-19 17:31:50,603 | INFO     | pgrp: 612146
[2025-04-19 13:32:02] 2025-04-19 17:31:50,603 | INFO     | corecount: 9
[2025-04-19 13:32:02] 2025-04-19 17:31:50,603 | INFO     | event service: False
[2025-04-19 13:32:02] 2025-04-19 17:31:50,603 | INFO     | sizes: {0: 2426653, 1: 2426852, 12: 2426852, 24: 2426880, 34: 2427114, 35: 2427142, 8829: 2455385, 8831: 2464326, 8834: 2464382, 8843: 2464552}
[2025-04-19 13:32:02] 2025-04-19 17:31:50,603 | INFO     | --------------------------------------------------
[2025-04-19 13:32:02] 2025-04-19 17:31:50,603 | INFO     | 
[2025-04-19 13:32:02] 2025-04-19 17:31:50,603 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-19 13:32:02] 2025-04-19 17:31:50,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,637 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,638 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,639 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 13:32:02] 2025-04-19 17:31:50,639 | INFO     | job 6607611019 has completed (purged errors)
[2025-04-19 13:32:02] 2025-04-19 17:31:50,639 | INFO     | overall cleanup function is called
[2025-04-19 13:32:02] 2025-04-19 17:31:51,647 | INFO     | --- collectZombieJob: --- 10, [612146]
[2025-04-19 13:32:02] 2025-04-19 17:31:51,647 | INFO     | zombie collector waiting for pid 612146
[2025-04-19 13:32:02] 2025-04-19 17:31:51,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 13:32:02] 2025-04-19 17:31:51,647 | INFO     | collected zombie processes
[2025-04-19 13:32:02] 2025-04-19 17:31:51,647 | INFO     | will attempt to kill all subprocesses of pid=612146
[2025-04-19 13:32:02] 2025-04-19 17:31:52,026 | INFO     | process IDs to be killed: [612146] (in reverse order)
[2025-04-19 13:32:02] 2025-04-19 17:31:52,110 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 13:32:02] 2025-04-19 17:31:52,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 13:32:02] 2025-04-19 17:31:52,121 | INFO     | did not find any defunct processes belonging to 612146
[2025-04-19 13:32:02] 2025-04-19 17:31:52,131 | INFO     | did not find any defunct processes belonging to 612146
[2025-04-19 13:32:02] 2025-04-19 17:31:52,132 | INFO     | ready for new job
[2025-04-19 13:32:02] 2025-04-19 17:31:52,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 13:32:02] 2025-04-19 17:31:52,133 | INFO     | **************************************
[2025-04-19 13:32:02] 2025-04-19 17:31:52,133 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 13:32:02] 2025-04-19 17:31:52,133 | INFO     | **************************************
[2025-04-19 13:32:02] 2025-04-19 17:31:52,133 | INFO     | 
[2025-04-19 13:32:02] 2025-04-19 17:31:52,151 | INFO     | architecture information:
[2025-04-19 13:32:02] 2025-04-19 17:31:52,151 | INFO     | executing command: cat /etc/os-release
[2025-04-19 13:32:02] 2025-04-19 17:31:52,168 | INFO     | cat /etc/os-release:
[2025-04-19 13:32:02] NAME="CentOS Linux"
[2025-04-19 13:32:02] VERSION="7 (Core)"
[2025-04-19 13:32:02] ID="centos"
[2025-04-19 13:32:02] ID_LIKE="rhel fedora"
[2025-04-19 13:32:02] VERSION_ID="7"
[2025-04-19 13:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 13:32:02] ANSI_COLOR="0;31"
[2025-04-19 13:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 13:32:02] HOME_URL="https://www.centos.org/"
[2025-04-19 13:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 13:32:02] 
[2025-04-19 13:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 13:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 13:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 13:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 13:32:02] 
[2025-04-19 13:32:02] 2025-04-19 17:31:52,168 | INFO     | **************************************
[2025-04-19 13:32:02] 2025-04-19 17:31:52,686 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-19 13:32:02] 2025-04-19 17:31:52,713 | INFO     | sufficient remaining disk space (75085381632 B)
[2025-04-19 13:32:02] 2025-04-19 17:31:52,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 13:32:02] 2025-04-19 17:31:52,714 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 13:32:02] 2025-04-19 17:31:52,714 | INFO     | update_server=False
[2025-04-19 13:32:02] 2025-04-19 17:31:52,714 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 13:32:02] 2025-04-19 17:31:52,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 13:32:02] 2025-04-19 17:31:52,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 13:32:02] 2025-04-19 17:31:52,741 | INFO     | all payload control threads have been joined
[2025-04-19 13:32:02] 2025-04-19 17:31:53,032 | INFO     | PID=600318 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 13:32:02] 2025-04-19 17:31:53,032 | INFO     | .. there are 17 such processes running
[2025-04-19 13:32:02] 2025-04-19 17:31:53,032 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 13:32:02] 2025-04-19 17:31:53,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 13:32:02] 2025-04-19 17:31:53,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 13:32:02] 2025-04-19 17:31:53,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 13:32:02] 2025-04-19 17:31:53,583 | INFO     | aborting loop
[2025-04-19 13:32:02] 2025-04-19 17:31:53,719 | INFO     | [job] retrieve thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:53,734 | INFO     | [job] validate thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:53,740 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:53,747 | INFO     | [payload] control thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:53,820 | INFO     | all data control threads have been joined
[2025-04-19 13:32:02] 2025-04-19 17:31:54,069 | INFO     | [payload] validate_post thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:54,193 | INFO     | all job control threads have been joined
[2025-04-19 13:32:02] 2025-04-19 17:31:54,197 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:54,588 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:54,593 | INFO     | [job] job monitor thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:54,717 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:54,735 | INFO     | [data] copytool_out thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:54,743 | INFO     | [payload] failed_post thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:54,825 | INFO     | [data] control thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:55,199 | INFO     | [job] control thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:55,213 | INFO     | [data] copytool_in thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:55,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 13:32:02] 2025-04-19 17:31:56,621 | INFO     | [job] queue monitor thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:56,724 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 13:32:02] 2025-04-19 17:31:56,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897060243264)>', '<ExcThread(monitor, started 139896714934016)>']
[2025-04-19 13:32:02] 2025-04-19 17:31:57,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 13:32:02] 2025-04-19 17:31:57,068 | INFO     | [monitor] control thread has ended
[2025-04-19 13:32:02] 2025-04-19 17:32:01,890 | INFO     | all workflow threads have been joined
[2025-04-19 13:32:02] 2025-04-19 17:32:01,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 13:32:02] 2025-04-19 17:32:01,890 | INFO     | traces error code: 0
[2025-04-19 13:32:02] 2025-04-19 17:32:01,891 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 13:32:02] 2025-04-19 17:32:02,121 [wrapper] ==== pilot stdout END ====
[2025-04-19 13:32:02] 2025-04-19 17:32:02,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 13:32:02] 2025-04-19 17:32:02,135 [wrapper] pilotpid: 600318
[2025-04-19 13:32:02] 2025-04-19 17:32:02,141 [wrapper] Pilot exit status: 0
[2025-04-19 13:32:02] 2025-04-19 17:32:02,177 [wrapper] pandaids: 6607611019
[2025-04-19 13:32:02] 2025-04-19 17:32:02,267 [wrapper] cleanup supervisor_pilot 1127499 600319
[2025-04-19 13:32:02] 2025-04-19 17:32:02,275 [wrapper] Test setup, not cleaning
[2025-04-19 13:32:02] 2025-04-19 17:32:02,278 [wrapper] apfmon messages muted
[2025-04-19 13:32:02] 2025-04-19 17:32:02,281 [wrapper] ==== wrapper stdout END ====
[2025-04-19 13:32:02] 2025-04-19 17:32:02,283 [wrapper] ==== wrapper stderr END ====
[2025-04-19 13:32:02]  *** Error codes and diagnostics ***
[2025-04-19 13:32:02]     "exeErrorCode": 0,
[2025-04-19 13:32:02]     "exeErrorDiag": "",
[2025-04-19 13:32:02]     "pilotErrorCode": 0,
[2025-04-19 13:32:02]     "pilotErrorDiag": "",
[2025-04-19 13:32:02]  *** Listing of results directory ***
[2025-04-19 13:32:02] total 416788
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 04:18 pilot3.tar.gz
[2025-04-19 13:32:02] -rwx------. 1 boincer umatlas     37140 Apr 19 04:31 runpilot2-wrapper.sh
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 04:31 queuedata.json
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas       100 Apr 19 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 13:32:02] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 11:01 run_atlas
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas       105 Apr 19 11:01 job.xml
[2025-04-19 13:32:02] -rw-r--r--. 2 boincer umatlas 223096403 Apr 19 11:01 EVNT.44075481._003112.pool.root.1
[2025-04-19 13:32:02] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 11:01 shared
[2025-04-19 13:32:02] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 11:01 input.tar.gz
[2025-04-19 13:32:02] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 11:01 start_atlas.sh
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas         0 Apr 19 11:01 boinc_lockfile
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas      2579 Apr 19 11:01 pandaJob.out
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas       467 Apr 19 11:01 setup.sh.local
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas    991300 Apr 19 11:03 agis_schedconf.cvmfs.json
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas   1618536 Apr 19 11:03 agis_ddmendpoints.agis.ALL.json
[2025-04-19 13:32:02] drwx------. 4 boincer umatlas      4096 Apr 19 11:03 pilot3
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas      6839 Apr 19 13:29 init_data.xml
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas 197487947 Apr 19 13:31 HITS.44075483._080269.pool.root.1
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas       530 Apr 19 13:31 boinc_task_state.xml
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas      1040 Apr 19 13:31 memory_monitor_summary.json
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas    366318 Apr 19 13:31 log.44075483._080269.job.log.tgz.1
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas        95 Apr 19 13:31 pilot_heartbeat.json
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas      7722 Apr 19 13:31 heartbeat.json
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 13:31 boinc_mmap_file
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas        27 Apr 19 13:31 wrapper_checkpoint.txt
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas      4748 Apr 19 13:32 pilotlog.txt
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas    805632 Apr 19 13:32 log.44075483._080269.job.log.1
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas       357 Apr 19 13:32 output.list
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas       620 Apr 19 13:32 runtime_log
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas   1187840 Apr 19 13:32 result.tar.gz
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas     11423 Apr 19 13:32 runtime_log.err
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas       653 Apr 19 13:32 BEKODm3mIQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmcThLDmiXOmVo.diag
[2025-04-19 13:32:02] -rw-r--r--. 1 boincer umatlas     20973 Apr 19 13:32 stderr.txt
[2025-04-19 13:32:02] HITS file was successfully produced:
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas 197487947 Apr 19 13:31 shared/HITS.pool.root.1
[2025-04-19 13:32:02]  *** Contents of shared directory: ***
[2025-04-19 13:32:02] total 412416
[2025-04-19 13:32:02] -rw-r--r--. 2 boincer umatlas 223096403 Apr 19 11:01 ATLAS.root_0
[2025-04-19 13:32:02] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 11:01 input.tar.gz
[2025-04-19 13:32:02] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 11:01 start_atlas.sh
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas 197487947 Apr 19 13:31 HITS.pool.root.1
[2025-04-19 13:32:02] -rw-------. 1 boincer umatlas   1187840 Apr 19 13:32 result.tar.gz
13:32:03 (595852): run_atlas exited; CPU time 38665.817849
13:32:03 (595852): called boinc_finish(0)

</stderr_txt>
]]>

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