Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:53:31 (16813): wrapper (7.7.26015): starting
06:53:31 (16813): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 06:53:31] Arguments: --nthreads 8
[2025-04-19 06:53:31] Threads: 8
[2025-04-19 06:53:31] Checking for CVMFS
[2025-04-19 06:53:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 06:53:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 06:53:31] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 06:53:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 06:53:32] 2.11.2.0 3761 251093 228516 145035 0 187 19624644 20275201 917 130560 0 50536385 99.995 7231368 59861 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 06:53:32] CVMFS is ok
[2025-04-19 06:53:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 06:53:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 06:53:32] Further information can be found at the LHC@home message board.
[2025-04-19 06:53:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 06:53:32] Checking for apptainer binary...
[2025-04-19 06:53:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 06:53:32] Running /usr/bin/apptainer --version
[2025-04-19 06:53:32] apptainer version 1.3.2-1.el7
[2025-04-19 06:53:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 06:53:32] c-205-36.aglt2.org
[2025-04-19 06:53:32] apptainer works
[2025-04-19 06:53:32] Set ATHENA_PROC_NUMBER=8
[2025-04-19 06:53:32] Set ATHENA_CORE_NUMBER=8
[2025-04-19 06:53:32] Starting ATLAS job with PandaID=6607579198
[2025-04-19 06:53:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 08:09:22]  *** The last 200 lines of the pilot log: ***
[2025-04-19 08:09:22]  protocol_id=None
[2025-04-19 08:09:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 08:09:22]  replicas=None
[2025-04-19 08:09:22]  scope=mc23_13p6TeV
[2025-04-19 08:09:22]  status=None
[2025-04-19 08:09:22]  status_code=0
[2025-04-19 08:09:22]  storage_token=
[2025-04-19 08:09:22]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6607579198/log.44075483._079892.job.log.tgz.1
[2025-04-19 08:09:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/32/log.44075483._079892.job.log.tgz.1
[2025-04-19 08:09:22]  workdir=None
[2025-04-19 08:09:22] ]
[2025-04-19 08:09:22] 2025-04-19 12:08:58,935 | INFO     | transferring file log.44075483._079892.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6607579198/log.44075483._079892.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 08:09:22] 2025-04-19 12:08:58,935 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6607579198/log.44075483._079892.job.log.tgz.1 /tmp/boinchome/slots/1/log.44075483._079892.job
[2025-04-19 08:09:22] 2025-04-19 12:08:58,953 | INFO     | adding to output.list: log.44075483._079892.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/32/log.44075483._079892.job.log.tg
[2025-04-19 08:09:22] 2025-04-19 12:08:58,955 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 08:09:22] 2025-04-19 12:08:58,955 | INFO     | summary of transferred files:
[2025-04-19 08:09:22] 2025-04-19 12:08:58,955 | INFO     |  -- lfn=log.44075483._079892.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 08:09:22] 2025-04-19 12:08:58,955 | INFO     | stage-out finished correctly
[2025-04-19 08:09:22] 2025-04-19 12:08:59,515 | INFO     | PID=20451 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 08:09:22] 2025-04-19 12:08:59,515 | INFO     | .. there are 2 such processes running
[2025-04-19 08:09:22] 2025-04-19 12:08:59,650 | INFO     | monitor loop #340: job 0:6607579198 is in state 'finished'
[2025-04-19 08:09:22] 2025-04-19 12:08:59,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 08:09:22] 2025-04-19 12:09:01,066 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 08:09:22] 2025-04-19 12:09:02,154 | INFO     | monitor loop #341: job 0:6607579198 is in state 'finished'
[2025-04-19 08:09:22] 2025-04-19 12:09:02,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 08:09:22] 2025-04-19 12:09:03,290 | INFO     | job 6607579198 has state=finished
[2025-04-19 08:09:22] 2025-04-19 12:09:03,290 | INFO     | preparing for final server update for job 6607579198 in state='finished'
[2025-04-19 08:09:22] 2025-04-19 12:09:03,359 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-19 08:09:22] 2025-04-19 12:09:03,359 | INFO     | this job has now completed (state=finished)
[2025-04-19 08:09:22] 2025-04-19 12:09:03,359 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 08:09:22] 2025-04-19 12:09:03,360 | INFO     | log transfer has been attempted: DONE
[2025-04-19 08:09:22] 2025-04-19 12:09:03,360 | INFO     | job 6607579198 has finished - writing final server update
[2025-04-19 08:09:22] 2025-04-19 12:09:03,360 | INFO     | total number of processed events: 400 (read)
[2025-04-19 08:09:22] 2025-04-19 12:09:03,362 | INFO     | executing command: lscpu
[2025-04-19 08:09:22] 2025-04-19 12:09:03,397 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 08:09:22] 2025-04-19 12:09:04,657 | INFO     | monitor loop #342: job 0:6607579198 is in state 'finished'
[2025-04-19 08:09:22] 2025-04-19 12:09:04,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 08:09:22] 2025-04-19 12:09:07,159 | INFO     | monitor loop #343: job 0:6607579198 is in state 'finished'
[2025-04-19 08:09:22] 2025-04-19 12:09:07,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 08:09:22] 2025-04-19 12:09:07,582 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 08:09:22] 2025-04-19 12:09:07,582 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6607579198/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 08:09:22] 2025-04-19 12:09:07,583 | INFO     | extracted standard info from prmon json
[2025-04-19 08:09:22] 2025-04-19 12:09:07,583 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 08:09:22] 2025-04-19 12:09:07,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 08:09:22] 2025-04-19 12:09:07,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 08:09:22] 2025-04-19 12:09:07,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 08:09:22] 2025-04-19 12:09:07,587 | INFO     | fitting pss+swap vs Time
[2025-04-19 08:09:22] 2025-04-19 12:09:07,587 | INFO     | sum of square deviations: 93240818.0
[2025-04-19 08:09:22] 2025-04-19 12:09:07,587 | INFO     | sum of deviations: 18848872449.0
[2025-04-19 08:09:22] 2025-04-19 12:09:07,588 | INFO     | mean x: 1745062367.0
[2025-04-19 08:09:22] 2025-04-19 12:09:07,588 | INFO     | mean y: 2361967.805970149
[2025-04-19 08:09:22] 2025-04-19 12:09:07,588 | INFO     | -- intersect: -352766507682.5335
[2025-04-19 08:09:22] 2025-04-19 12:09:07,588 | INFO     | intersect: -352766507682.5335
[2025-04-19 08:09:22] 2025-04-19 12:09:07,588 | INFO     | chi2: 1.6641796616158866
[2025-04-19 08:09:22] 2025-04-19 12:09:07,588 | INFO     | -- intersect: -352766507682.5335
[2025-04-19 08:09:22] 2025-04-19 12:09:07,589 | INFO     | current memory leak: 202.15 B/s (using 67 data points, chi2=1.66)
[2025-04-19 08:09:22] 2025-04-19 12:09:07,589 | INFO     | ..............................
[2025-04-19 08:09:22] 2025-04-19 12:09:07,589 | INFO     | . Timing measurements:
[2025-04-19 08:09:22] 2025-04-19 12:09:07,589 | INFO     | . get job = 0 s
[2025-04-19 08:09:22] 2025-04-19 12:09:07,589 | INFO     | . initial setup = 2 s
[2025-04-19 08:09:22] 2025-04-19 12:09:07,590 | INFO     | . payload setup = 6 s
[2025-04-19 08:09:22] 2025-04-19 12:09:07,590 | INFO     | . stage-in = 0 s
[2025-04-19 08:09:22] 2025-04-19 12:09:07,590 | INFO     | . payload execution = 4489 s
[2025-04-19 08:09:22] 2025-04-19 12:09:07,590 | INFO     | . stage-out = 0 s
[2025-04-19 08:09:22] 2025-04-19 12:09:07,590 | INFO     | . log creation = 0 s
[2025-04-19 08:09:22] 2025-04-19 12:09:07,590 | INFO     | ..............................
[2025-04-19 08:09:22] 2025-04-19 12:09:07,675 | INFO     | 
[2025-04-19 08:09:22] 2025-04-19 12:09:07,676 | INFO     | job summary report
[2025-04-19 08:09:22] 2025-04-19 12:09:07,676 | INFO     | --------------------------------------------------
[2025-04-19 08:09:22] 2025-04-19 12:09:07,676 | INFO     | PanDA job id: 6607579198
[2025-04-19 08:09:22] 2025-04-19 12:09:07,676 | INFO     | task id: 44075483
[2025-04-19 08:09:22] 2025-04-19 12:09:07,676 | INFO     | errors: (none)
[2025-04-19 08:09:22] 2025-04-19 12:09:07,676 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 08:09:22] 2025-04-19 12:09:07,677 | INFO     | pilot state: finished 
[2025-04-19 08:09:22] 2025-04-19 12:09:07,677 | INFO     | transexitcode: 0
[2025-04-19 08:09:22] 2025-04-19 12:09:07,677 | INFO     | exeerrorcode: 0
[2025-04-19 08:09:22] 2025-04-19 12:09:07,677 | INFO     | exeerrordiag: 
[2025-04-19 08:09:22] 2025-04-19 12:09:07,677 | INFO     | exitcode: 0
[2025-04-19 08:09:22] 2025-04-19 12:09:07,677 | INFO     | exitmsg: OK
[2025-04-19 08:09:22] 2025-04-19 12:09:07,677 | INFO     | cpuconsumptiontime: 28791 s
[2025-04-19 08:09:22] 2025-04-19 12:09:07,677 | INFO     | nevents: 400
[2025-04-19 08:09:22] 2025-04-19 12:09:07,678 | INFO     | neventsw: 0
[2025-04-19 08:09:22] 2025-04-19 12:09:07,678 | INFO     | pid: 26897
[2025-04-19 08:09:22] 2025-04-19 12:09:07,678 | INFO     | pgrp: 26897
[2025-04-19 08:09:22] 2025-04-19 12:09:07,678 | INFO     | corecount: 8
[2025-04-19 08:09:22] 2025-04-19 12:09:07,678 | INFO     | event service: False
[2025-04-19 08:09:22] 2025-04-19 12:09:07,678 | INFO     | sizes: {0: 2426773, 5: 2426979, 11: 2427035, 4499: 2453154, 4500: 2462095, 4502: 2462151, 4509: 2462449}
[2025-04-19 08:09:22] 2025-04-19 12:09:07,678 | INFO     | --------------------------------------------------
[2025-04-19 08:09:22] 2025-04-19 12:09:07,678 | INFO     | 
[2025-04-19 08:09:22] 2025-04-19 12:09:07,679 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 08:09:22] 2025-04-19 12:09:07,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,704 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,705 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 08:09:22] 2025-04-19 12:09:07,706 | INFO     | job 6607579198 has completed (purged errors)
[2025-04-19 08:09:22] 2025-04-19 12:09:07,706 | INFO     | overall cleanup function is called
[2025-04-19 08:09:22] 2025-04-19 12:09:08,714 | INFO     | --- collectZombieJob: --- 10, [26897]
[2025-04-19 08:09:22] 2025-04-19 12:09:08,714 | INFO     | zombie collector waiting for pid 26897
[2025-04-19 08:09:22] 2025-04-19 12:09:08,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 08:09:22] 2025-04-19 12:09:08,715 | INFO     | collected zombie processes
[2025-04-19 08:09:22] 2025-04-19 12:09:08,715 | INFO     | will attempt to kill all subprocesses of pid=26897
[2025-04-19 08:09:22] 2025-04-19 12:09:08,829 | INFO     | process IDs to be killed: [26897] (in reverse order)
[2025-04-19 08:09:22] 2025-04-19 12:09:08,888 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 08:09:22] 2025-04-19 12:09:08,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 08:09:22] 2025-04-19 12:09:08,893 | INFO     | did not find any defunct processes belonging to 26897
[2025-04-19 08:09:22] 2025-04-19 12:09:08,896 | INFO     | did not find any defunct processes belonging to 26897
[2025-04-19 08:09:22] 2025-04-19 12:09:08,897 | INFO     | ready for new job
[2025-04-19 08:09:22] 2025-04-19 12:09:08,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 08:09:22] 2025-04-19 12:09:08,899 | INFO     | **************************************
[2025-04-19 08:09:22] 2025-04-19 12:09:08,899 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 08:09:22] 2025-04-19 12:09:08,899 | INFO     | **************************************
[2025-04-19 08:09:22] 2025-04-19 12:09:08,899 | INFO     | 
[2025-04-19 08:09:22] 2025-04-19 12:09:08,901 | INFO     | architecture information:
[2025-04-19 08:09:22] 2025-04-19 12:09:08,901 | INFO     | executing command: cat /etc/os-release
[2025-04-19 08:09:22] 2025-04-19 12:09:08,917 | INFO     | cat /etc/os-release:
[2025-04-19 08:09:22] NAME="CentOS Linux"
[2025-04-19 08:09:22] VERSION="7 (Core)"
[2025-04-19 08:09:22] ID="centos"
[2025-04-19 08:09:22] ID_LIKE="rhel fedora"
[2025-04-19 08:09:22] VERSION_ID="7"
[2025-04-19 08:09:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 08:09:22] ANSI_COLOR="0;31"
[2025-04-19 08:09:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 08:09:22] HOME_URL="https://www.centos.org/"
[2025-04-19 08:09:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 08:09:22] 
[2025-04-19 08:09:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 08:09:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 08:09:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 08:09:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 08:09:22] 
[2025-04-19 08:09:22] 2025-04-19 12:09:08,917 | INFO     | **************************************
[2025-04-19 08:09:22] 2025-04-19 12:09:09,420 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 08:09:22] 2025-04-19 12:09:09,439 | INFO     | sufficient remaining disk space (32838254592 B)
[2025-04-19 08:09:22] 2025-04-19 12:09:09,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 08:09:22] 2025-04-19 12:09:09,440 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 08:09:22] 2025-04-19 12:09:09,440 | INFO     | update_server=False
[2025-04-19 08:09:22] 2025-04-19 12:09:09,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 08:09:22] 2025-04-19 12:09:09,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:09:22] 2025-04-19 12:09:09,541 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 08:09:22] 2025-04-19 12:09:09,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 08:09:22] 2025-04-19 12:09:09,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 08:09:22] 2025-04-19 12:09:09,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 08:09:22] 2025-04-19 12:09:09,663 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 08:09:22] 2025-04-19 12:09:09,663 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 08:09:22] 2025-04-19 12:09:09,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:09:22] 2025-04-19 12:09:09,663 | INFO     | will abort loop
[2025-04-19 08:09:22] 2025-04-19 12:09:10,057 | INFO     | all data control threads have been joined
[2025-04-19 08:09:22] 2025-04-19 12:09:10,445 | INFO     | [job] retrieve thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:10,446 | INFO     | [job] queue monitor thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:10,511 | INFO     | [payload] validate_post thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:10,631 | INFO     | all job control threads have been joined
[2025-04-19 08:09:22] 2025-04-19 12:09:10,668 | INFO     | [job] job monitor thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:10,739 | INFO     | all payload control threads have been joined
[2025-04-19 08:09:22] 2025-04-19 12:09:11,063 | INFO     | [data] control thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,225 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,268 | INFO     | [payload] failed_post thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,323 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,326 | INFO     | [job] validate thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,559 | INFO     | [data] copytool_out thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,632 | INFO     | [job] control thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 08:09:22] 2025-04-19 12:09:11,708 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,717 | INFO     | [data] copytool_in thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,744 | INFO     | [payload] control thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:11,810 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:15,676 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 08:09:22] 2025-04-19 12:09:17,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140191680468800)>', '<ExcThread(monitor, started 140191373170432)>']
[2025-04-19 08:09:22] 2025-04-19 12:09:17,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 08:09:22] 2025-04-19 12:09:17,582 | INFO     | [monitor] control thread has ended
[2025-04-19 08:09:22] 2025-04-19 12:09:22,510 | INFO     | all workflow threads have been joined
[2025-04-19 08:09:22] 2025-04-19 12:09:22,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 08:09:22] 2025-04-19 12:09:22,511 | INFO     | traces error code: 0
[2025-04-19 08:09:22] 2025-04-19 12:09:22,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 08:09:22] 2025-04-19 12:09:22,616 [wrapper] ==== pilot stdout END ====
[2025-04-19 08:09:22] 2025-04-19 12:09:22,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 08:09:22] 2025-04-19 12:09:22,623 [wrapper] pilotpid: 20451
[2025-04-19 08:09:22] 2025-04-19 12:09:22,627 [wrapper] Pilot exit status: 0
[2025-04-19 08:09:22] 2025-04-19 12:09:22,640 [wrapper] pandaids: 6607579198
[2025-04-19 08:09:22] 2025-04-19 12:09:22,683 [wrapper] cleanup supervisor_pilot 11676 20452
[2025-04-19 08:09:22] 2025-04-19 12:09:22,687 [wrapper] Test setup, not cleaning
[2025-04-19 08:09:22] 2025-04-19 12:09:22,691 [wrapper] apfmon messages muted
[2025-04-19 08:09:22] 2025-04-19 12:09:22,694 [wrapper] ==== wrapper stdout END ====
[2025-04-19 08:09:22] 2025-04-19 12:09:22,698 [wrapper] ==== wrapper stderr END ====
[2025-04-19 08:09:22]  *** Error codes and diagnostics ***
[2025-04-19 08:09:22]     "exeErrorCode": 0,
[2025-04-19 08:09:22]     "exeErrorDiag": "",
[2025-04-19 08:09:22]     "pilotErrorCode": 0,
[2025-04-19 08:09:22]     "pilotErrorDiag": "",
[2025-04-19 08:09:22]  *** Listing of results directory ***
[2025-04-19 08:09:22] total 406948
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 04:01 pilot3.tar.gz
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 04:02 queuedata.json
[2025-04-19 08:09:22] -rwx------ 1 boincer umatlas     37140 Apr 19 04:02 runpilot2-wrapper.sh
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas       100 Apr 19 06:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 08:09:22] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 06:53 run_atlas
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas       105 Apr 19 06:53 job.xml
[2025-04-19 08:09:22] -rw-r--r-- 2 boincer umatlas 222815576 Apr 19 06:53 EVNT.44075481._003098.pool.root.1
[2025-04-19 08:09:22] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 06:53 start_atlas.sh
[2025-04-19 08:09:22] drwxrwx--x 2 boincer umatlas      4096 Apr 19 06:53 shared
[2025-04-19 08:09:22] -rw-r--r-- 2 boincer umatlas    508881 Apr 19 06:53 input.tar.gz
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas         0 Apr 19 06:53 boinc_lockfile
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 06:53 pandaJob.out
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas       424 Apr 19 06:53 setup.sh.local
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas    991292 Apr 19 06:53 agis_schedconf.cvmfs.json
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas   1618536 Apr 19 06:53 agis_ddmendpoints.agis.ALL.json
[2025-04-19 08:09:22] drwx------ 4 boincer umatlas      4096 Apr 19 06:53 pilot3
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas      6050 Apr 19 08:03 init_data.xml
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas       529 Apr 19 08:08 boinc_task_state.xml
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas 188513759 Apr 19 08:08 HITS.44075483._079892.pool.root.1
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas        95 Apr 19 08:08 pilot_heartbeat.json
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas      1058 Apr 19 08:08 memory_monitor_summary.json
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas    309120 Apr 19 08:08 log.44075483._079892.job.log.tgz.1
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 08:09 boinc_mmap_file
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas        27 Apr 19 08:09 wrapper_checkpoint.txt
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas      7736 Apr 19 08:09 heartbeat.json
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas      4539 Apr 19 08:09 pilotlog.txt
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas    451750 Apr 19 08:09 log.44075483._079892.job.log.1
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas       357 Apr 19 08:09 output.list
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas       620 Apr 19 08:09 runtime_log
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas    778240 Apr 19 08:09 result.tar.gz
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas     11013 Apr 19 08:09 runtime_log.err
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas       656 Apr 19 08:09 OL1LDm6KIQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmsH6KDmuMq7on.diag
[2025-04-19 08:09:22] -rw-r--r-- 1 boincer umatlas     21771 Apr 19 08:09 stderr.txt
[2025-04-19 08:09:22] HITS file was successfully produced:
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas 188513759 Apr 19 08:08 shared/HITS.pool.root.1
[2025-04-19 08:09:22]  *** Contents of shared directory: ***
[2025-04-19 08:09:22] total 402976
[2025-04-19 08:09:22] -rw-r--r-- 2 boincer umatlas 222815576 Apr 19 06:53 ATLAS.root_0
[2025-04-19 08:09:22] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 06:53 start_atlas.sh
[2025-04-19 08:09:22] -rw-r--r-- 2 boincer umatlas    508881 Apr 19 06:53 input.tar.gz
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas 188513759 Apr 19 08:08 HITS.pool.root.1
[2025-04-19 08:09:22] -rw------- 1 boincer umatlas    778240 Apr 19 08:09 result.tar.gz
08:09:24 (16813): run_atlas exited; CPU time 28800.350837
08:09:24 (16813): called boinc_finish(0)

</stderr_txt>
]]>

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