Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:08:52 (1493131): wrapper (7.7.26015): starting
22:08:52 (1493131): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 22:08:52] Arguments: --nthreads 4
[2025-04-19 22:08:52] Threads: 4
[2025-04-19 22:08:52] Checking for CVMFS
[2025-04-19 22:08:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 22:08:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 22:08:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 22:08:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 22:08:53] 2.9.2.0 2922 4638 95328 145049 3 56 26571676 36864001 0 130560 0 3782545 99.992 1104791 17251 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 22:08:53] CVMFS is ok
[2025-04-19 22:08:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 22:08:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 22:08:53] Further information can be found at the LHC@home message board.
[2025-04-19 22:08:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 22:08:53] Checking for apptainer binary...
[2025-04-19 22:08:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 22:08:53] Running /usr/bin/apptainer --version
[2025-04-19 22:08:53] apptainer version 1.3.6-6.1
[2025-04-19 22:08:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 22:08:53] thA332a
[2025-04-19 22:08:53] apptainer works
[2025-04-19 22:08:53] Set ATHENA_PROC_NUMBER=4
[2025-04-19 22:08:53] Set ATHENA_CORE_NUMBER=4
[2025-04-19 22:08:53] Starting ATLAS job with PandaID=6607577939
[2025-04-19 22:08:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 23:29:51]  *** The last 200 lines of the pilot log: ***
[2025-04-19 23:29:51]  guid=7a7ea3a6-0391-41b9-9e15-463bafff2d10
[2025-04-19 23:29:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 23:29:51]  is_altstaged=None
[2025-04-19 23:29:51]  is_tar=False
[2025-04-19 23:29:51]  lfn=log.44075483._079609.job.log.tgz.1
[2025-04-19 23:29:51]  mtime=0
[2025-04-19 23:29:51]  protocol_id=None
[2025-04-19 23:29:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 23:29:51]  replicas=None
[2025-04-19 23:29:51]  scope=mc23_13p6TeV
[2025-04-19 23:29:51]  status=None
[2025-04-19 23:29:51]  status_code=0
[2025-04-19 23:29:51]  storage_token=
[2025-04-19 23:29:51]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607577939/log.44075483._079609.job.log.tgz.1
[2025-04-19 23:29:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/81/log.44075483._079609.job.log.tgz.1
[2025-04-19 23:29:51]  workdir=None
[2025-04-19 23:29:51] ]
[2025-04-19 23:29:51] 2025-04-19 21:29:26,492 | INFO     | transferring file log.44075483._079609.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607577939/log.44075483._079609.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 23:29:51] 2025-04-19 21:29:26,492 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607577939/log.44075483._079609.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0796
[2025-04-19 23:29:51] 2025-04-19 21:29:26,512 | INFO     | adding to output.list: log.44075483._079609.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/81/log.44075483._079609.job.log.tg
[2025-04-19 23:29:51] 2025-04-19 21:29:26,512 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 23:29:51] 2025-04-19 21:29:26,512 | INFO     | summary of transferred files:
[2025-04-19 23:29:51] 2025-04-19 21:29:26,512 | INFO     |  -- lfn=log.44075483._079609.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 23:29:51] 2025-04-19 21:29:26,513 | INFO     | stage-out finished correctly
[2025-04-19 23:29:51] 2025-04-19 21:29:26,553 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 23:29:51] 2025-04-19 21:29:26,593 | INFO     | job 6607577939 has state=finished
[2025-04-19 23:29:51] 2025-04-19 21:29:26,593 | INFO     | preparing for final server update for job 6607577939 in state='finished'
[2025-04-19 23:29:51] 2025-04-19 21:29:26,594 | INFO     | this job has now completed (state=finished)
[2025-04-19 23:29:51] 2025-04-19 21:29:26,594 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 23:29:51] 2025-04-19 21:29:26,594 | INFO     | log transfer has been attempted: DONE
[2025-04-19 23:29:51] 2025-04-19 21:29:26,594 | INFO     | job 6607577939 has finished - writing final server update
[2025-04-19 23:29:51] 2025-04-19 21:29:26,594 | INFO     | total number of processed events: 400 (read)
[2025-04-19 23:29:51] 2025-04-19 21:29:26,595 | INFO     | executing command: lscpu
[2025-04-19 23:29:51] 2025-04-19 21:29:26,616 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 23:29:51] 2025-04-19 21:29:27,920 | INFO     | 4828s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-19 23:29:51] 2025-04-19 21:29:28,910 | INFO     | monitor loop #371: job 0:6607577939 is in state 'finished'
[2025-04-19 23:29:51] 2025-04-19 21:29:28,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:29:51] 2025-04-19 21:29:31,415 | INFO     | monitor loop #372: job 0:6607577939 is in state 'finished'
[2025-04-19 23:29:51] 2025-04-19 21:29:31,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 23:29:51] 2025-04-19 21:29:31,561 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 23:29:51] 2025-04-19 21:29:31,562 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607577939/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 23:29:51] 2025-04-19 21:29:31,562 | INFO     | extracted standard info from prmon json
[2025-04-19 23:29:51] 2025-04-19 21:29:31,562 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 23:29:51] 2025-04-19 21:29:31,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 23:29:51] 2025-04-19 21:29:31,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 23:29:51] 2025-04-19 21:29:31,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | fitting pss+swap vs Time
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | sum of square deviations: 115715658.0
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | sum of deviations: 12642830781.000002
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | mean x: 1745095834.5
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | mean y: 2414683.4166666665
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | -- intersect: -190662804817.0548
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | intersect: -190662804817.0548
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | chi2: 1.46147899863729
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | -- intersect: -190662804817.0548
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | current memory leak: 109.26 B/s (using 72 data points, chi2=1.46)
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | ..............................
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | . Timing measurements:
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | . get job = 0 s
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | . initial setup = 1 s
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | . payload setup = 4 s
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | . stage-in = 0 s
[2025-04-19 23:29:51] 2025-04-19 21:29:31,564 | INFO     | . payload execution = 4802 s
[2025-04-19 23:29:51] 2025-04-19 21:29:31,565 | INFO     | . stage-out = 0 s
[2025-04-19 23:29:51] 2025-04-19 21:29:31,565 | INFO     | . log creation = 0 s
[2025-04-19 23:29:51] 2025-04-19 21:29:31,565 | INFO     | ..............................
[2025-04-19 23:29:51] 2025-04-19 21:29:31,607 | INFO     | 
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | job summary report
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | --------------------------------------------------
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | PanDA job id: 6607577939
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | task id: 44075483
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | errors: (none)
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | pilot state: finished 
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | transexitcode: 0
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | exeerrorcode: 0
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | exeerrordiag: 
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | exitcode: 0
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | exitmsg: OK
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | cpuconsumptiontime: 16588 s
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | nevents: 400
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | neventsw: 0
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | pid: 1503420
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | pgrp: 1503420
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | corecount: 4
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | event service: False
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | sizes: {0: 2426656, 1: 2426855, 4: 2427061, 11: 2427089, 4810: 2453323, 4811: 2462482, 4816: 2462596}
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | --------------------------------------------------
[2025-04-19 23:29:51] 2025-04-19 21:29:31,608 | INFO     | 
[2025-04-19 23:29:51] 2025-04-19 21:29:31,609 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 23:29:51] 2025-04-19 21:29:31,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 23:29:51] 2025-04-19 21:29:31,629 | INFO     | job 6607577939 has completed (purged errors)
[2025-04-19 23:29:51] 2025-04-19 21:29:31,629 | INFO     | overall cleanup function is called
[2025-04-19 23:29:51] 2025-04-19 21:29:32,635 | INFO     | --- collectZombieJob: --- 10, [1503420]
[2025-04-19 23:29:51] 2025-04-19 21:29:32,636 | INFO     | zombie collector waiting for pid 1503420
[2025-04-19 23:29:51] 2025-04-19 21:29:32,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 23:29:51] 2025-04-19 21:29:32,636 | INFO     | collected zombie processes
[2025-04-19 23:29:51] 2025-04-19 21:29:32,636 | INFO     | will attempt to kill all subprocesses of pid=1503420
[2025-04-19 23:29:51] 2025-04-19 21:29:32,682 | INFO     | process IDs to be killed: [1503420] (in reverse order)
[2025-04-19 23:29:51] 2025-04-19 21:29:32,716 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 23:29:51] 2025-04-19 21:29:32,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 23:29:51] 2025-04-19 21:29:32,718 | INFO     | did not find any defunct processes belonging to 1503420
[2025-04-19 23:29:51] 2025-04-19 21:29:32,719 | INFO     | did not find any defunct processes belonging to 1503420
[2025-04-19 23:29:51] 2025-04-19 21:29:32,719 | INFO     | ready for new job
[2025-04-19 23:29:51] 2025-04-19 21:29:32,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 23:29:51] 2025-04-19 21:29:32,720 | INFO     | **************************************
[2025-04-19 23:29:51] 2025-04-19 21:29:32,720 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 23:29:51] 2025-04-19 21:29:32,720 | INFO     | **************************************
[2025-04-19 23:29:51] 2025-04-19 21:29:32,720 | INFO     | 
[2025-04-19 23:29:51] 2025-04-19 21:29:32,721 | INFO     | architecture information:
[2025-04-19 23:29:51] 2025-04-19 21:29:32,721 | INFO     | executing command: cat /etc/os-release
[2025-04-19 23:29:51] 2025-04-19 21:29:32,735 | INFO     | cat /etc/os-release:
[2025-04-19 23:29:51] NAME="CentOS Linux"
[2025-04-19 23:29:51] VERSION="7 (Core)"
[2025-04-19 23:29:51] ID="centos"
[2025-04-19 23:29:51] ID_LIKE="rhel fedora"
[2025-04-19 23:29:51] VERSION_ID="7"
[2025-04-19 23:29:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 23:29:51] ANSI_COLOR="0;31"
[2025-04-19 23:29:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 23:29:51] HOME_URL="https://www.centos.org/"
[2025-04-19 23:29:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 23:29:51] 
[2025-04-19 23:29:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 23:29:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 23:29:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 23:29:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 23:29:51] 
[2025-04-19 23:29:51] 2025-04-19 21:29:32,736 | INFO     | **************************************
[2025-04-19 23:29:51] 2025-04-19 21:29:33,239 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 23:29:51] 2025-04-19 21:29:33,258 | INFO     | sufficient remaining disk space (328669855744 B)
[2025-04-19 23:29:51] 2025-04-19 21:29:33,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 23:29:51] 2025-04-19 21:29:33,258 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 23:29:51] 2025-04-19 21:29:33,258 | INFO     | update_server=False
[2025-04-19 23:29:51] 2025-04-19 21:29:33,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 23:29:51] 2025-04-19 21:29:33,259 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 23:29:51] 2025-04-19 21:29:33,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:29:51] 2025-04-19 21:29:33,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 23:29:51] 2025-04-19 21:29:33,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 23:29:51] 2025-04-19 21:29:33,259 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 23:29:51] 2025-04-19 21:29:33,259 | INFO     | aborting loop
[2025-04-19 23:29:51] 2025-04-19 21:29:33,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 23:29:51] 2025-04-19 21:29:33,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 23:29:51] 2025-04-19 21:29:33,317 | INFO     | all data control threads have been joined
[2025-04-19 23:29:51] 2025-04-19 21:29:33,328 | INFO     | all job control threads have been joined
[2025-04-19 23:29:51] 2025-04-19 21:29:33,334 | INFO     | all payload control threads have been joined
[2025-04-19 23:29:51] 2025-04-19 21:29:34,264 | INFO     | [job] retrieve thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:34,265 | INFO     | [job] queue monitor thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:34,265 | INFO     | [job] job monitor thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:34,318 | INFO     | [data] copytool_in thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:34,320 | INFO     | [data] control thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:34,334 | INFO     | [job] control thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:34,339 | INFO     | [payload] control thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:34,480 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:34,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 23:29:51] 2025-04-19 21:29:34,884 | INFO     | [job] validate thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:35,017 | INFO     | [payload] validate_post thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:35,047 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:35,065 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:35,505 | INFO     | [payload] failed_post thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:36,572 | INFO     | [data] copytool_out thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:37,266 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:43,372 | INFO     | job.realtimelogging is not enabled
[2025-04-19 23:29:51] 2025-04-19 21:29:44,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 23:29:51] 2025-04-19 21:29:45,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412133160768)>', '<ExcThread(monitor, started 140411137947392)>']
[2025-04-19 23:29:51] 2025-04-19 21:29:46,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 23:29:51] 2025-04-19 21:29:46,329 | INFO     | [monitor] control thread has ended
[2025-04-19 23:29:51] 2025-04-19 21:29:51,008 | INFO     | all workflow threads have been joined
[2025-04-19 23:29:51] 2025-04-19 21:29:51,009 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 23:29:51] 2025-04-19 21:29:51,009 | INFO     | traces error code: 0
[2025-04-19 23:29:51] 2025-04-19 21:29:51,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 23:29:51] 2025-04-19 21:29:51,089 [wrapper] ==== pilot stdout END ====
[2025-04-19 23:29:51] 2025-04-19 21:29:51,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 23:29:51] 2025-04-19 21:29:51,098 [wrapper] pilotpid: 1496844
[2025-04-19 23:29:51] 2025-04-19 21:29:51,102 [wrapper] Pilot exit status: 0
[2025-04-19 23:29:51] 2025-04-19 21:29:51,114 [wrapper] pandaids: 6607577939
[2025-04-19 23:29:51] 2025-04-19 21:29:51,137 [wrapper] cleanup supervisor_pilot 1515559 1496845
[2025-04-19 23:29:51] 2025-04-19 21:29:51,142 [wrapper] Test setup, not cleaning
[2025-04-19 23:29:51] 2025-04-19 21:29:51,146 [wrapper] apfmon messages muted
[2025-04-19 23:29:51] 2025-04-19 21:29:51,150 [wrapper] ==== wrapper stdout END ====
[2025-04-19 23:29:51] 2025-04-19 21:29:51,154 [wrapper] ==== wrapper stderr END ====
[2025-04-19 23:29:51]  *** Error codes and diagnostics ***
[2025-04-19 23:29:51]     "exeErrorCode": 0,
[2025-04-19 23:29:51]     "exeErrorDiag": "",
[2025-04-19 23:29:51]     "pilotErrorCode": 0,
[2025-04-19 23:29:51]     "pilotErrorDiag": "",
[2025-04-19 23:29:51]  *** Listing of results directory ***
[2025-04-19 23:29:51] total 417564
[2025-04-19 23:29:51] -rwx------ 1 boinc boinc     37140 Apr 19 09:37 runpilot2-wrapper.sh
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc      5111 Apr 19 09:37 queuedata.json
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc    495897 Apr 19 09:37 pilot3.tar.gz
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc       100 Apr 19 22:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 23:29:51] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 22:08 run_atlas
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc       105 Apr 19 22:08 job.xml
[2025-04-19 23:29:51] -rw-r--r-- 2 boinc boinc 225357194 Apr 19 22:08 EVNT.44075481._003087.pool.root.1
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc      6854 Apr 19 22:08 init_data.xml
[2025-04-19 23:29:51] drwxrwx--x 2 boinc boinc      4096 Apr 19 22:08 shared
[2025-04-19 23:29:51] -rw-r--r-- 2 boinc boinc    508883 Apr 19 22:08 input.tar.gz
[2025-04-19 23:29:51] -rw-r--r-- 2 boinc boinc     17569 Apr 19 22:08 start_atlas.sh
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc         0 Apr 19 22:08 boinc_lockfile
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc      2579 Apr 19 22:08 pandaJob.out
[2025-04-19 23:29:51] -rw------- 1 boinc boinc       424 Apr 19 22:08 setup.sh.local
[2025-04-19 23:29:51] -rw------- 1 boinc boinc    991284 Apr 19 22:08 agis_schedconf.cvmfs.json
[2025-04-19 23:29:51] -rw------- 1 boinc boinc   1618536 Apr 19 22:08 agis_ddmendpoints.agis.ALL.json
[2025-04-19 23:29:51] drwx------ 4 boinc boinc      4096 Apr 19 22:09 pilot3
[2025-04-19 23:29:51] -rw------- 1 boinc boinc 196939390 Apr 19 23:29 HITS.44075483._079609.pool.root.1
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc       530 Apr 19 23:29 boinc_task_state.xml
[2025-04-19 23:29:51] -rw------- 1 boinc boinc      1021 Apr 19 23:29 memory_monitor_summary.json
[2025-04-19 23:29:51] -rw------- 1 boinc boinc    240844 Apr 19 23:29 log.44075483._079609.job.log.tgz.1
[2025-04-19 23:29:51] -rw------- 1 boinc boinc        95 Apr 19 23:29 pilot_heartbeat.json
[2025-04-19 23:29:51] -rw------- 1 boinc boinc      7664 Apr 19 23:29 heartbeat.json
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc      8192 Apr 19 23:29 boinc_mmap_file
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc        27 Apr 19 23:29 wrapper_checkpoint.txt
[2025-04-19 23:29:51] -rw------- 1 boinc boinc      4552 Apr 19 23:29 pilotlog.txt
[2025-04-19 23:29:51] -rw------- 1 boinc boinc    471965 Apr 19 23:29 log.44075483._079609.job.log.1
[2025-04-19 23:29:51] -rw------- 1 boinc boinc       357 Apr 19 23:29 output.list
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc       620 Apr 19 23:29 runtime_log
[2025-04-19 23:29:51] -rw------- 1 boinc boinc    727040 Apr 19 23:29 result.tar.gz
[2025-04-19 23:29:51] -rw------- 1 boinc boinc       659 Apr 19 23:29 zDuNDm4wHQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmSMhLDmmgtyYn.diag
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc     11104 Apr 19 23:29 runtime_log.err
[2025-04-19 23:29:51] -rw-r--r-- 1 boinc boinc     21288 Apr 19 23:29 stderr.txt
[2025-04-19 23:29:51] HITS file was successfully produced:
[2025-04-19 23:29:51] -rw------- 1 boinc boinc 196939390 Apr 19 23:29 shared/HITS.pool.root.1
[2025-04-19 23:29:51]  *** Contents of shared directory: ***
[2025-04-19 23:29:51] total 413640
[2025-04-19 23:29:51] -rw-r--r-- 2 boinc boinc 225357194 Apr 19 22:08 ATLAS.root_0
[2025-04-19 23:29:51] -rw-r--r-- 2 boinc boinc    508883 Apr 19 22:08 input.tar.gz
[2025-04-19 23:29:51] -rw-r--r-- 2 boinc boinc     17569 Apr 19 22:08 start_atlas.sh
[2025-04-19 23:29:51] -rw------- 1 boinc boinc 196939390 Apr 19 23:29 HITS.pool.root.1
[2025-04-19 23:29:51] -rw------- 1 boinc boinc    727040 Apr 19 23:29 result.tar.gz
23:29:52 (1493131): run_atlas exited; CPU time 16604.433402
23:29:52 (1493131): called boinc_finish(0)

</stderr_txt>
]]>

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