Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:27:50 (40502): wrapper (7.7.26015): starting
06:27:50 (40502): wrapper: running run_atlas (--nthreads 10)
[2025-04-19 06:27:50] Arguments: --nthreads 10
[2025-04-19 06:27:50] Threads: 10
[2025-04-19 06:27:50] Checking for CVMFS
[2025-04-19 06:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 06:27:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 06:27:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 06:27:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 06:27:54] 2.11.2.0 20863 28127 227588 145035 2 419 12267852 18432000 10520 130560 0 128069796 98.952 304782028 36442 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 06:27:54] CVMFS is ok
[2025-04-19 06:27:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 06:27:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 06:27:54] Further information can be found at the LHC@home message board.
[2025-04-19 06:27:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 06:27:54] Checking for apptainer binary...
[2025-04-19 06:27:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 06:27:55] Running /usr/bin/apptainer --version
[2025-04-19 06:27:55] apptainer version 1.3.2-1.el7
[2025-04-19 06:27:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 06:28:28] c-210-1.aglt2.org
[2025-04-19 06:28:28] apptainer works
[2025-04-19 06:28:28] Set ATHENA_PROC_NUMBER=10
[2025-04-19 06:28:28] Set ATHENA_CORE_NUMBER=10
[2025-04-19 06:28:28] Starting ATLAS job with PandaID=6607530797
[2025-04-19 06:28:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-20 08:01:38]  *** The last 200 lines of the pilot log: ***
[2025-04-20 08:01:38] 2025-04-20 12:01:02,993 | INFO     | monitor loop #3732: job 0:6607530797 is in state 'finished'
[2025-04-20 08:01:38] 2025-04-20 12:01:02,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:01:38] 2025-04-20 12:01:05,498 | INFO     | monitor loop #3733: job 0:6607530797 is in state 'finished'
[2025-04-20 08:01:38] 2025-04-20 12:01:05,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:01:38] 2025-04-20 12:01:08,011 | INFO     | monitor loop #3734: job 0:6607530797 is in state 'finished'
[2025-04-20 08:01:38] 2025-04-20 12:01:08,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:01:38] 2025-04-20 12:01:10,536 | INFO     | monitor loop #3735: job 0:6607530797 is in state 'finished'
[2025-04-20 08:01:38] 2025-04-20 12:01:10,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:01:38] 2025-04-20 12:01:11,873 | INFO     | PID=31607 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-20 08:01:38] 2025-04-20 12:01:11,906 | INFO     | .. there are 40 such processes running
[2025-04-20 08:01:38] 2025-04-20 12:01:13,041 | INFO     | monitor loop #3736: job 0:6607530797 is in state 'finished'
[2025-04-20 08:01:38] 2025-04-20 12:01:13,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:01:38] 2025-04-20 12:01:15,546 | INFO     | monitor loop #3737: job 0:6607530797 is in state 'finished'
[2025-04-20 08:01:38] 2025-04-20 12:01:15,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:01:38] 2025-04-20 12:01:18,053 | INFO     | monitor loop #3738: job 0:6607530797 is in state 'finished'
[2025-04-20 08:01:38] 2025-04-20 12:01:18,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-20 08:01:38] 2025-04-20 12:01:19,042 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-20 08:01:38] 2025-04-20 12:01:19,043 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607530797/memory_monitor_summary.json (trf name=prmon)
[2025-04-20 08:01:38] 2025-04-20 12:01:19,043 | INFO     | extracted standard info from prmon json
[2025-04-20 08:01:38] 2025-04-20 12:01:19,044 | INFO     | extracted standard memory fields from prmon json
[2025-04-20 08:01:38] 2025-04-20 12:01:19,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-20 08:01:38] 2025-04-20 12:01:19,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-20 08:01:38] 2025-04-20 12:01:19,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-20 08:01:38] 2025-04-20 12:01:19,192 | INFO     | fitting pss+swap vs Time
[2025-04-20 08:01:38] 2025-04-20 12:01:19,194 | INFO     | sum of square deviations: 1042353798293.6345
[2025-04-20 08:01:38] 2025-04-20 12:01:19,259 | INFO     | sum of deviations: 3623878149189.707
[2025-04-20 08:01:38] 2025-04-20 12:01:19,259 | INFO     | mean x: 1745104744.0473964
[2025-04-20 08:01:38] 2025-04-20 12:01:19,259 | INFO     | mean y: 2516037.8631508676
[2025-04-20 08:01:38] 2025-04-20 12:01:19,259 | INFO     | -- intersect: -6064566904.946975
[2025-04-20 08:01:38] 2025-04-20 12:01:19,259 | INFO     | intersect: -6064566904.946975
[2025-04-20 08:01:38] 2025-04-20 12:01:19,262 | INFO     | chi2: 20.614752530635382
[2025-04-20 08:01:38] 2025-04-20 12:01:19,265 | INFO     | sum of square deviations: 1031951791187.2257
[2025-04-20 08:01:38] 2025-04-20 12:01:19,331 | INFO     | sum of deviations: 3933427252937.0674
[2025-04-20 08:01:38] 2025-04-20 12:01:19,331 | INFO     | mean x: 1745104591.551909
[2025-04-20 08:01:38] 2025-04-20 12:01:19,332 | INFO     | mean y: 2520569.624916276
[2025-04-20 08:01:38] 2025-04-20 12:01:19,332 | INFO     | -- intersect: -6649187405.743594
[2025-04-20 08:01:38] 2025-04-20 12:01:19,332 | INFO     | intersect: -6649187405.743594
[2025-04-20 08:01:38] 2025-04-20 12:01:19,334 | INFO     | chi2: 18.144622114514707
[2025-04-20 08:01:38] 2025-04-20 12:01:19,335 | INFO     | current chi2=18.144622114514707 (change=11.982343287652075 %)
[2025-04-20 08:01:38] 2025-04-20 12:01:19,335 | INFO     | right removable region: 1492
[2025-04-20 08:01:38] 2025-04-20 12:01:19,337 | INFO     | sum of square deviations: 1031950468339.1228
[2025-04-20 08:01:38] 2025-04-20 12:01:19,396 | INFO     | sum of deviations: 3069300314551.6143
[2025-04-20 08:01:38] 2025-04-20 12:01:19,396 | INFO     | mean x: 1745104896.5525787
[2025-04-20 08:01:38] 2025-04-20 12:01:19,397 | INFO     | mean y: 2524167.03683858
[2025-04-20 08:01:38] 2025-04-20 12:01:19,397 | INFO     | -- intersect: -5187890656.394594
[2025-04-20 08:01:38] 2025-04-20 12:01:19,397 | INFO     | intersect: -5187890656.394594
[2025-04-20 08:01:38] 2025-04-20 12:01:19,399 | INFO     | chi2: 15.669966336824679
[2025-04-20 08:01:38] 2025-04-20 12:01:19,399 | INFO     | current chi2=15.669966336824679 (change=23.986638629119145 %)
[2025-04-20 08:01:38] 2025-04-20 12:01:19,399 | INFO     | left removable region: 10
[2025-04-20 08:01:38] 2025-04-20 12:01:19,401 | INFO     | sum of square deviations: 1009308861242.289
[2025-04-20 08:01:38] 2025-04-20 12:01:19,472 | INFO     | sum of deviations: 2889759675104.0117
[2025-04-20 08:01:38] 2025-04-20 12:01:19,472 | INFO     | mean x: 1745104866.0620782
[2025-04-20 08:01:38] 2025-04-20 12:01:19,472 | INFO     | mean y: 2535939.9237516867
[2025-04-20 08:01:38] 2025-04-20 12:01:19,472 | INFO     | -- intersect: -4993886725.549511
[2025-04-20 08:01:38] 2025-04-20 12:01:19,472 | INFO     | intersect: -4993886725.549511
[2025-04-20 08:01:38] 2025-04-20 12:01:19,475 | INFO     | chi2: 9.427676846612576
[2025-04-20 08:01:38] 2025-04-20 12:01:19,475 | INFO     | -- intersect: -4993886725.549511
[2025-04-20 08:01:38] 2025-04-20 12:01:19,476 | INFO     | current memory leak: 2.86 B/s (using 1482 data points, chi2=9.43)
[2025-04-20 08:01:38] 2025-04-20 12:01:19,478 | INFO     | ..............................
[2025-04-20 08:01:38] 2025-04-20 12:01:19,478 | INFO     | . Timing measurements:
[2025-04-20 08:01:38] 2025-04-20 12:01:19,478 | INFO     | . get job = 0 s
[2025-04-20 08:01:38] 2025-04-20 12:01:19,478 | INFO     | . initial setup = 15 s
[2025-04-20 08:01:38] 2025-04-20 12:01:19,478 | INFO     | . payload setup = 131 s
[2025-04-20 08:01:38] 2025-04-20 12:01:19,478 | INFO     | . stage-in = 0 s
[2025-04-20 08:01:38] 2025-04-20 12:01:19,479 | INFO     | . payload execution = 91452 s
[2025-04-20 08:01:38] 2025-04-20 12:01:19,479 | INFO     | . stage-out = 7 s
[2025-04-20 08:01:38] 2025-04-20 12:01:19,479 | INFO     | . log creation = 2 s
[2025-04-20 08:01:38] 2025-04-20 12:01:19,479 | INFO     | ..............................
[2025-04-20 08:01:38] 2025-04-20 12:01:19,647 | INFO     | 
[2025-04-20 08:01:38] 2025-04-20 12:01:19,648 | INFO     | job summary report
[2025-04-20 08:01:38] 2025-04-20 12:01:19,648 | INFO     | --------------------------------------------------
[2025-04-20 08:01:38] 2025-04-20 12:01:19,648 | INFO     | PanDA job id: 6607530797
[2025-04-20 08:01:38] 2025-04-20 12:01:19,650 | INFO     | task id: 44075483
[2025-04-20 08:01:38] 2025-04-20 12:01:19,651 | INFO     | errors: (none)
[2025-04-20 08:01:38] 2025-04-20 12:01:19,651 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-20 08:01:38] 2025-04-20 12:01:19,651 | INFO     | pilot state: finished 
[2025-04-20 08:01:38] 2025-04-20 12:01:19,651 | INFO     | transexitcode: 0
[2025-04-20 08:01:38] 2025-04-20 12:01:19,651 | INFO     | exeerrorcode: 0
[2025-04-20 08:01:38] 2025-04-20 12:01:19,652 | INFO     | exeerrordiag: 
[2025-04-20 08:01:38] 2025-04-20 12:01:19,652 | INFO     | exitcode: 0
[2025-04-20 08:01:38] 2025-04-20 12:01:19,652 | INFO     | exitmsg: OK
[2025-04-20 08:01:38] 2025-04-20 12:01:19,652 | INFO     | cpuconsumptiontime: 62456 s
[2025-04-20 08:01:38] 2025-04-20 12:01:19,652 | INFO     | nevents: 400
[2025-04-20 08:01:38] 2025-04-20 12:01:19,652 | INFO     | neventsw: 0
[2025-04-20 08:01:38] 2025-04-20 12:01:19,652 | INFO     | pid: 20535
[2025-04-20 08:01:38] 2025-04-20 12:01:19,652 | INFO     | pgrp: 20535
[2025-04-20 08:01:38] 2025-04-20 12:01:19,653 | INFO     | corecount: 10
[2025-04-20 08:01:38] 2025-04-20 12:01:19,653 | INFO     | event service: False
[2025-04-20 08:01:38] 2025-04-20 12:01:19,653 | INFO     | sizes: {0: 2425996, 1: 2426597, 2: 2426709, 3: 2426880, 4: 2426908, 15: 2426936, 26: 2427092, 38: 2427120, 50: 2427148, 62: 2427176, 70: 2427410, 73: 2427718, 9158
[2025-04-20 08:01:38] 2025-04-20 12:01:19,653 | INFO     | --------------------------------------------------
[2025-04-20 08:01:38] 2025-04-20 12:01:19,653 | INFO     | 
[2025-04-20 08:01:38] 2025-04-20 12:01:19,653 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-20 08:01:38] 2025-04-20 12:01:19,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,835 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,835 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-20 08:01:38] 2025-04-20 12:01:19,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-20 08:01:38] 2025-04-20 12:01:19,849 | INFO     | job 6607530797 has completed (purged errors)
[2025-04-20 08:01:38] 2025-04-20 12:01:19,856 | INFO     | overall cleanup function is called
[2025-04-20 08:01:38] 2025-04-20 12:01:20,879 | INFO     | --- collectZombieJob: --- 10, [20535]
[2025-04-20 08:01:38] 2025-04-20 12:01:20,880 | INFO     | zombie collector waiting for pid 20535
[2025-04-20 08:01:38] 2025-04-20 12:01:20,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-20 08:01:38] 2025-04-20 12:01:20,880 | INFO     | collected zombie processes
[2025-04-20 08:01:38] 2025-04-20 12:01:20,880 | INFO     | will attempt to kill all subprocesses of pid=20535
[2025-04-20 08:01:38] 2025-04-20 12:01:21,605 | INFO     | process IDs to be killed: [20535] (in reverse order)
[2025-04-20 08:01:38] 2025-04-20 12:01:22,347 | WARNING  | found no corresponding commands to process id(s)
[2025-04-20 08:01:38] 2025-04-20 12:01:22,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-20 08:01:38] 2025-04-20 12:01:22,425 | INFO     | did not find any defunct processes belonging to 20535
[2025-04-20 08:01:38] 2025-04-20 12:01:22,438 | INFO     | did not find any defunct processes belonging to 20535
[2025-04-20 08:01:38] 2025-04-20 12:01:22,438 | INFO     | ready for new job
[2025-04-20 08:01:38] 2025-04-20 12:01:22,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-20 08:01:38] 2025-04-20 12:01:22,443 | INFO     | **************************************
[2025-04-20 08:01:38] 2025-04-20 12:01:22,443 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-20 08:01:38] 2025-04-20 12:01:22,443 | INFO     | **************************************
[2025-04-20 08:01:38] 2025-04-20 12:01:22,443 | INFO     | 
[2025-04-20 08:01:38] 2025-04-20 12:01:22,446 | INFO     | architecture information:
[2025-04-20 08:01:38] 2025-04-20 12:01:22,446 | INFO     | executing command: cat /etc/os-release
[2025-04-20 08:01:38] 2025-04-20 12:01:22,481 | INFO     | cat /etc/os-release:
[2025-04-20 08:01:38] NAME="CentOS Linux"
[2025-04-20 08:01:38] VERSION="7 (Core)"
[2025-04-20 08:01:38] ID="centos"
[2025-04-20 08:01:38] ID_LIKE="rhel fedora"
[2025-04-20 08:01:38] VERSION_ID="7"
[2025-04-20 08:01:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-20 08:01:38] ANSI_COLOR="0;31"
[2025-04-20 08:01:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-20 08:01:38] HOME_URL="https://www.centos.org/"
[2025-04-20 08:01:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-20 08:01:38] 
[2025-04-20 08:01:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-20 08:01:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-20 08:01:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-20 08:01:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-20 08:01:38] 
[2025-04-20 08:01:38] 2025-04-20 12:01:22,482 | INFO     | **************************************
[2025-04-20 08:01:38] 2025-04-20 12:01:22,984 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-20 08:01:38] 2025-04-20 12:01:23,224 | INFO     | sufficient remaining disk space (57135857664 B)
[2025-04-20 08:01:38] 2025-04-20 12:01:23,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-20 08:01:38] 2025-04-20 12:01:23,248 | INFO     | current server update state: UPDATING_FINAL
[2025-04-20 08:01:38] 2025-04-20 12:01:23,248 | INFO     | update_server=False
[2025-04-20 08:01:38] 2025-04-20 12:01:23,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-20 08:01:38] 2025-04-20 12:01:23,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-20 08:01:38] 2025-04-20 12:01:23,968 | INFO     | found 0 job(s) in 20 queues
[2025-04-20 08:01:38] 2025-04-20 12:01:23,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-20 08:01:38] 2025-04-20 12:01:23,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-20 08:01:38] 2025-04-20 12:01:24,055 | INFO     | all data control threads have been joined
[2025-04-20 08:01:38] 2025-04-20 12:01:24,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-20 08:01:38] 2025-04-20 12:01:24,094 | INFO     | aborting loop
[2025-04-20 08:01:38] 2025-04-20 12:01:24,253 | INFO     | [job] retrieve thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:24,346 | INFO     | [payload] validate_post thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:24,348 | INFO     | [payload] failed_post thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:24,587 | INFO     | [payload] execute_payloads thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:24,594 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:24,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-20 08:01:38] 2025-04-20 12:01:24,663 | INFO     | all job control threads have been joined
[2025-04-20 08:01:38] 2025-04-20 12:01:24,722 | INFO     | all payload control threads have been joined
[2025-04-20 08:01:38] 2025-04-20 12:01:24,877 | INFO     | [payload] validate_pre thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,061 | INFO     | [data] control thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,099 | INFO     | [job] job monitor thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,255 | INFO     | [data] copytool_out thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,380 | INFO     | [data] copytool_in thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,389 | INFO     | [job] create_data_payload thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,440 | INFO     | [job] validate thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,668 | INFO     | [job] queue monitor thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,669 | INFO     | [job] control thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:25,728 | INFO     | [payload] control thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:26,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-20 08:01:38] 2025-04-20 12:01:30,050 | INFO     | [data] queue_monitor thread has finished
[2025-04-20 08:01:38] 2025-04-20 12:01:31,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140385778124608)>', '<ExcThread(monitor, started 140385334572800)>']
[2025-04-20 08:01:38] 2025-04-20 12:01:32,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-20 08:01:38] 2025-04-20 12:01:32,013 | INFO     | [monitor] control thread has ended
[2025-04-20 08:01:38] 2025-04-20 12:01:36,037 | INFO     | all workflow threads have been joined
[2025-04-20 08:01:38] 2025-04-20 12:01:36,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-20 08:01:38] 2025-04-20 12:01:36,038 | INFO     | traces error code: 0
[2025-04-20 08:01:38] 2025-04-20 12:01:36,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-20 08:01:38] 2025-04-20 12:01:36,464 [wrapper] ==== pilot stdout END ====
[2025-04-20 08:01:38] 2025-04-20 12:01:36,470 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-20 08:01:38] 2025-04-20 12:01:36,474 [wrapper] pilotpid: 31607
[2025-04-20 08:01:38] 2025-04-20 12:01:36,478 [wrapper] Pilot exit status: 0
[2025-04-20 08:01:38] 2025-04-20 12:01:36,610 [wrapper] pandaids: 6607530797
[2025-04-20 08:01:38] 2025-04-20 12:01:36,889 [wrapper] cleanup supervisor_pilot 10910 31608
[2025-04-20 08:01:38] 2025-04-20 12:01:36,924 [wrapper] Test setup, not cleaning
[2025-04-20 08:01:38] 2025-04-20 12:01:36,952 [wrapper] apfmon messages muted
[2025-04-20 08:01:38] 2025-04-20 12:01:36,994 [wrapper] ==== wrapper stdout END ====
[2025-04-20 08:01:38] 2025-04-20 12:01:37,038 [wrapper] ==== wrapper stderr END ====
[2025-04-20 08:01:38]  *** Error codes and diagnostics ***
[2025-04-20 08:01:38]     "exeErrorCode": 0,
[2025-04-20 08:01:38]     "exeErrorDiag": "",
[2025-04-20 08:01:38]     "pilotErrorCode": 0,
[2025-04-20 08:01:38]     "pilotErrorDiag": "",
[2025-04-20 08:01:38]  *** Listing of results directory ***
[2025-04-20 08:01:38] total 428020
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 03:04 pilot3.tar.gz
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 03:31 queuedata.json
[2025-04-20 08:01:38] -rwx------ 1 boincer umatlas     37140 Apr 19 03:31 runpilot2-wrapper.sh
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas       100 Apr 19 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-20 08:01:38] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 06:27 run_atlas
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas       105 Apr 19 06:27 job.xml
[2025-04-20 08:01:38] -rw-r--r-- 2 boincer umatlas 223437106 Apr 19 06:27 EVNT.44075481._003086.pool.root.1
[2025-04-20 08:01:38] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 06:27 start_atlas.sh
[2025-04-20 08:01:38] drwxrwx--x 2 boincer umatlas      4096 Apr 19 06:27 shared
[2025-04-20 08:01:38] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 06:27 input.tar.gz
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas         0 Apr 19 06:27 boinc_lockfile
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 06:28 pandaJob.out
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas       467 Apr 19 06:28 setup.sh.local
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas    991292 Apr 19 06:31 agis_schedconf.cvmfs.json
[2025-04-20 08:01:38] drwx------ 4 boincer umatlas      4096 Apr 19 06:31 pilot3
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas 197512175 Apr 20 07:57 HITS.44075483._079557.pool.root.1
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas       531 Apr 20 07:58 boinc_task_state.xml
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas      6227 Apr 20 07:58 init_data.xml
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas      1060 Apr 20 08:00 memory_monitor_summary.json
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas   1618536 Apr 20 08:00 agis_ddmendpoints.agis.ALL.json
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas   1000708 Apr 20 08:00 log.44075483._079557.job.log.tgz.1
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas        95 Apr 20 08:00 pilot_heartbeat.json
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas      7759 Apr 20 08:01 heartbeat.json
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas      8192 Apr 20 08:01 boinc_mmap_file
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas        28 Apr 20 08:01 wrapper_checkpoint.txt
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas      4353 Apr 20 08:01 pilotlog.txt
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas   5735704 Apr 20 08:01 log.44075483._079557.job.log.1
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas       357 Apr 20 08:01 output.list
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas       620 Apr 20 08:01 runtime_log
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas   6758400 Apr 20 08:01 result.tar.gz
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas     11416 Apr 20 08:01 runtime_log.err
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas       664 Apr 20 08:01 ffxNDmArHQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmcLhLDmUSqJln.diag
[2025-04-20 08:01:38] -rw-r--r-- 1 boincer umatlas     21541 Apr 20 08:01 stderr.txt
[2025-04-20 08:01:38] HITS file was successfully produced:
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas 197512175 Apr 20 07:57 shared/HITS.pool.root.1
[2025-04-20 08:01:38]  *** Contents of shared directory: ***
[2025-04-20 08:01:38] total 418212
[2025-04-20 08:01:38] -rw-r--r-- 2 boincer umatlas 223437106 Apr 19 06:27 ATLAS.root_0
[2025-04-20 08:01:38] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 06:27 start_atlas.sh
[2025-04-20 08:01:38] -rw-r--r-- 2 boincer umatlas    508893 Apr 19 06:27 input.tar.gz
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas 197512175 Apr 20 07:57 HITS.pool.root.1
[2025-04-20 08:01:38] -rw------- 1 boincer umatlas   6758400 Apr 20 08:01 result.tar.gz
08:01:40 (40502): run_atlas exited; CPU time 65787.974082
08:01:40 (40502): called boinc_finish(0)

</stderr_txt>
]]>

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