Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
19:19:50 (1350385): wrapper (7.7.26015): starting
19:19:50 (1350385): wrapper: running run_atlas (--nthreads 3)
[2025-04-19 19:19:50] Arguments: --nthreads 3
[2025-04-19 19:19:50] Threads: 3
[2025-04-19 19:19:50] Checking for CVMFS
[2025-04-19 19:19:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 19:19:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 19:19:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 19:19:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 19:19:51] 2.9.2.0 2955 4760 74404 145046 3 55 27406181 36864000 0 130560 0 3487187 99.991 1310094 15572 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 19:19:51] CVMFS is ok
[2025-04-19 19:19:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 19:19:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 19:19:51] Further information can be found at the LHC@home message board.
[2025-04-19 19:19:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 19:19:51] Checking for apptainer binary...
[2025-04-19 19:19:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 19:19:51] Running /usr/bin/apptainer --version
[2025-04-19 19:19:51] apptainer version 1.3.6-6.1
[2025-04-19 19:19:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 19:19:51] magicA252a
[2025-04-19 19:19:51] apptainer works
[2025-04-19 19:19:51] Set ATHENA_PROC_NUMBER=3
[2025-04-19 19:19:51] Set ATHENA_CORE_NUMBER=3
[2025-04-19 19:19:51] Starting ATLAS job with PandaID=6607510328
[2025-04-19 19:19:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 20:57:22]  *** The last 200 lines of the pilot log: ***
[2025-04-19 20:57:22]  is_tar=False
[2025-04-19 20:57:22]  lfn=log.44075483._079297.job.log.tgz.1
[2025-04-19 20:57:22]  mtime=0
[2025-04-19 20:57:22]  protocol_id=None
[2025-04-19 20:57:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 20:57:22]  replicas=None
[2025-04-19 20:57:22]  scope=mc23_13p6TeV
[2025-04-19 20:57:22]  status=None
[2025-04-19 20:57:22]  status_code=0
[2025-04-19 20:57:22]  storage_token=
[2025-04-19 20:57:22]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607510328/log.44075483._079297.job.log.tgz.1
[2025-04-19 20:57:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/92/log.44075483._079297.job.log.tgz.1
[2025-04-19 20:57:22]  workdir=None
[2025-04-19 20:57:22] ]
[2025-04-19 20:57:22] 2025-04-19 18:56:39,707 | INFO     | transferring file log.44075483._079297.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607510328/log.44075483._079297.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 20:57:22] 2025-04-19 18:56:39,707 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607510328/log.44075483._079297.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0792
[2025-04-19 20:57:22] 2025-04-19 18:56:39,719 | INFO     | adding to output.list: log.44075483._079297.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/92/log.44075483._079297.job.log.tg
[2025-04-19 20:57:22] 2025-04-19 18:56:39,719 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 20:57:22] 2025-04-19 18:56:39,720 | INFO     | summary of transferred files:
[2025-04-19 20:57:22] 2025-04-19 18:56:39,720 | INFO     |  -- lfn=log.44075483._079297.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 20:57:22] 2025-04-19 18:56:39,720 | INFO     | stage-out finished correctly
[2025-04-19 20:57:22] 2025-04-19 18:56:39,751 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 20:57:22] 2025-04-19 18:56:40,104 | INFO     | job 6607510328 has state=finished
[2025-04-19 20:57:22] 2025-04-19 18:56:40,104 | INFO     | preparing for final server update for job 6607510328 in state='finished'
[2025-04-19 20:57:22] 2025-04-19 18:56:40,105 | INFO     | this job has now completed (state=finished)
[2025-04-19 20:57:22] 2025-04-19 18:56:40,105 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 20:57:22] 2025-04-19 18:56:40,106 | INFO     | log transfer has been attempted: DONE
[2025-04-19 20:57:22] 2025-04-19 18:56:40,106 | INFO     | job 6607510328 has finished - writing final server update
[2025-04-19 20:57:22] 2025-04-19 18:56:40,106 | INFO     | total number of processed events: 400 (read)
[2025-04-19 20:57:22] 2025-04-19 18:56:40,109 | INFO     | executing command: lscpu
[2025-04-19 20:57:22] 2025-04-19 18:56:40,162 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 20:57:22] 2025-04-19 18:56:40,374 | WARNING  | process 1360483 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 20:57:22] 2025-04-19 18:56:40,374 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607510328/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 20:57:22] 2025-04-19 18:56:40,431 | INFO     | number of running child processes to parent process 1360483: 1
[2025-04-19 20:57:22] 2025-04-19 18:56:40,432 | INFO     | maximum number of monitored processes: 6
[2025-04-19 20:57:22] 2025-04-19 18:56:42,936 | INFO     | monitor loop #445: job 0:6607510328 is in state 'finished'
[2025-04-19 20:57:22] 2025-04-19 18:56:42,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 20:57:22] 2025-04-19 18:56:45,439 | INFO     | monitor loop #446: job 0:6607510328 is in state 'finished'
[2025-04-19 20:57:22] 2025-04-19 18:56:45,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 20:57:22] 2025-04-19 18:56:45,851 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 20:57:22] 2025-04-19 18:56:45,851 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607510328/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 20:57:22] 2025-04-19 18:56:45,851 | INFO     | extracted standard info from prmon json
[2025-04-19 20:57:22] 2025-04-19 18:56:45,852 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 20:57:22] 2025-04-19 18:56:45,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 20:57:22] 2025-04-19 18:56:45,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 20:57:22] 2025-04-19 18:56:45,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | fitting pss+swap vs Time
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | sum of square deviations: 211285822.0
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | sum of deviations: 1456685672.999999
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | mean x: 1745086184.5
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | mean y: 2415938.409090909
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | -- intersect: -12028879011.004898
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | intersect: -12028879011.004898
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | chi2: 1.0542076048837385
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | -- intersect: -12028879011.004898
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | current memory leak: 6.89 B/s (using 88 data points, chi2=1.05)
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | ..............................
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | . Timing measurements:
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | . get job = 0 s
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | . initial setup = 1 s
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | . payload setup = 5 s
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | . stage-in = 0 s
[2025-04-19 20:57:22] 2025-04-19 18:56:45,853 | INFO     | . payload execution = 5771 s
[2025-04-19 20:57:22] 2025-04-19 18:56:45,854 | INFO     | . stage-out = 0 s
[2025-04-19 20:57:22] 2025-04-19 18:56:45,854 | INFO     | . log creation = 0 s
[2025-04-19 20:57:22] 2025-04-19 18:56:45,854 | INFO     | ..............................
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | 
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | job summary report
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | --------------------------------------------------
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | PanDA job id: 6607510328
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | task id: 44075483
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | errors: (none)
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | pilot state: finished 
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | transexitcode: 0
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | exeerrorcode: 0
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | exeerrordiag: 
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | exitcode: 0
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | exitmsg: OK
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | cpuconsumptiontime: 15392 s
[2025-04-19 20:57:22] 2025-04-19 18:56:45,886 | INFO     | nevents: 400
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | neventsw: 0
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | pid: 1360483
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | pgrp: 1360483
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | corecount: 3
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | event service: False
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | sizes: {0: 2426826, 6: 2427032, 11: 2427060, 5780: 2453703, 5781: 2462706, 5787: 2462820}
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | --------------------------------------------------
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | 
[2025-04-19 20:57:22] 2025-04-19 18:56:45,887 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 20:57:22] 2025-04-19 18:56:45,900 | INFO     | job 6607510328 has completed (purged errors)
[2025-04-19 20:57:22] 2025-04-19 18:56:45,900 | INFO     | overall cleanup function is called
[2025-04-19 20:57:22] 2025-04-19 18:56:46,906 | INFO     | --- collectZombieJob: --- 10, [1360483]
[2025-04-19 20:57:22] 2025-04-19 18:56:46,906 | INFO     | zombie collector waiting for pid 1360483
[2025-04-19 20:57:22] 2025-04-19 18:56:46,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 20:57:22] 2025-04-19 18:56:46,906 | INFO     | collected zombie processes
[2025-04-19 20:57:22] 2025-04-19 18:56:46,907 | INFO     | will attempt to kill all subprocesses of pid=1360483
[2025-04-19 20:57:22] 2025-04-19 18:56:46,945 | INFO     | process IDs to be killed: [1360483] (in reverse order)
[2025-04-19 20:57:22] 2025-04-19 18:56:46,970 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 20:57:22] 2025-04-19 18:56:46,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 20:57:22] 2025-04-19 18:56:46,971 | INFO     | did not find any defunct processes belonging to 1360483
[2025-04-19 20:57:22] 2025-04-19 18:56:46,972 | INFO     | did not find any defunct processes belonging to 1360483
[2025-04-19 20:57:22] 2025-04-19 18:56:46,972 | INFO     | ready for new job
[2025-04-19 20:57:22] 2025-04-19 18:56:46,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 20:57:22] 2025-04-19 18:56:46,973 | INFO     | **************************************
[2025-04-19 20:57:22] 2025-04-19 18:56:46,973 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 20:57:22] 2025-04-19 18:56:46,973 | INFO     | **************************************
[2025-04-19 20:57:22] 2025-04-19 18:56:46,973 | INFO     | 
[2025-04-19 20:57:22] 2025-04-19 18:56:46,974 | INFO     | architecture information:
[2025-04-19 20:57:22] 2025-04-19 18:56:46,974 | INFO     | executing command: cat /etc/os-release
[2025-04-19 20:57:22] 2025-04-19 18:56:46,983 | INFO     | cat /etc/os-release:
[2025-04-19 20:57:22] NAME="CentOS Linux"
[2025-04-19 20:57:22] VERSION="7 (Core)"
[2025-04-19 20:57:22] ID="centos"
[2025-04-19 20:57:22] ID_LIKE="rhel fedora"
[2025-04-19 20:57:22] VERSION_ID="7"
[2025-04-19 20:57:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 20:57:22] ANSI_COLOR="0;31"
[2025-04-19 20:57:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 20:57:22] HOME_URL="https://www.centos.org/"
[2025-04-19 20:57:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 20:57:22] 
[2025-04-19 20:57:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 20:57:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 20:57:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 20:57:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 20:57:22] 
[2025-04-19 20:57:22] 2025-04-19 18:56:46,983 | INFO     | **************************************
[2025-04-19 20:57:22] 2025-04-19 18:56:47,487 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 20:57:22] 2025-04-19 18:56:47,500 | INFO     | sufficient remaining disk space (328254619648 B)
[2025-04-19 20:57:22] 2025-04-19 18:56:47,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 20:57:22] 2025-04-19 18:56:47,500 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 20:57:22] 2025-04-19 18:56:47,500 | INFO     | update_server=False
[2025-04-19 20:57:22] 2025-04-19 18:56:47,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 20:57:22] 2025-04-19 18:56:47,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 20:57:22] 2025-04-19 18:56:47,758 | INFO     | all data control threads have been joined
[2025-04-19 20:57:22] 2025-04-19 18:56:47,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 20:57:22] 2025-04-19 18:56:47,943 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 20:57:22] 2025-04-19 18:56:47,943 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 20:57:22] 2025-04-19 18:56:47,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 20:57:22] 2025-04-19 18:56:47,944 | INFO     | will abort loop
[2025-04-19 20:57:22] 2025-04-19 18:56:48,083 | INFO     | all payload control threads have been joined
[2025-04-19 20:57:22] 2025-04-19 18:56:48,336 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 20:57:22] 2025-04-19 18:56:48,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 20:57:22] 2025-04-19 18:56:48,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 20:57:22] 2025-04-19 18:56:48,480 | INFO     | all job control threads have been joined
[2025-04-19 20:57:22] 2025-04-19 18:56:48,506 | INFO     | [job] queue monitor thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:48,507 | INFO     | [job] retrieve thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:48,545 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:48,764 | INFO     | [data] control thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:48,832 | INFO     | [payload] validate_post thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:48,949 | INFO     | [job] job monitor thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,042 | INFO     | [data] copytool_in thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,089 | INFO     | [payload] control thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,099 | INFO     | [job] validate thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,230 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,356 | INFO     | [payload] failed_post thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,486 | INFO     | [job] control thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,486 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,707 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:49,768 | INFO     | [data] copytool_out thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:50,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 20:57:22] 2025-04-19 18:56:54,298 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 20:57:22] 2025-04-19 18:56:55,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764380546880)>', '<ExcThread(monitor, started 139763654842112)>']
[2025-04-19 20:57:22] 2025-04-19 18:56:56,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 20:57:22] 2025-04-19 18:56:56,379 | INFO     | [monitor] control thread has ended
[2025-04-19 20:57:22] 2025-04-19 18:57:00,956 | INFO     | all workflow threads have been joined
[2025-04-19 20:57:22] 2025-04-19 18:57:00,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 20:57:22] 2025-04-19 18:57:00,957 | INFO     | traces error code: 0
[2025-04-19 20:57:22] 2025-04-19 18:57:00,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 20:57:22] 2025-04-19 18:57:01,005 [wrapper] ==== pilot stdout END ====
[2025-04-19 20:57:22] 2025-04-19 18:57:01,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 20:57:22] 2025-04-19 18:57:01,011 [wrapper] pilotpid: 1354033
[2025-04-19 20:57:22] 2025-04-19 18:57:01,014 [wrapper] Pilot exit status: 0
[2025-04-19 20:57:22] 2025-04-19 18:57:01,022 [wrapper] pandaids: 6607510328
[2025-04-19 20:57:22] 2025-04-19 18:57:01,040 [wrapper] cleanup supervisor_pilot 1372603 1354034
[2025-04-19 20:57:22] 2025-04-19 18:57:01,043 [wrapper] Test setup, not cleaning
[2025-04-19 20:57:22] 2025-04-19 18:57:01,046 [wrapper] apfmon messages muted
[2025-04-19 20:57:22] 2025-04-19 18:57:01,048 [wrapper] ==== wrapper stdout END ====
[2025-04-19 20:57:22] 2025-04-19 18:57:01,051 [wrapper] ==== wrapper stderr END ====
[2025-04-19 20:57:22]  *** Error codes and diagnostics ***
[2025-04-19 20:57:22]     "exeErrorCode": 0,
[2025-04-19 20:57:22]     "exeErrorDiag": "",
[2025-04-19 20:57:22]     "pilotErrorCode": 0,
[2025-04-19 20:57:22]     "pilotErrorDiag": "",
[2025-04-19 20:57:22]  *** Listing of results directory ***
[2025-04-19 20:57:22] total 415580
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc    495897 Apr 19 09:04 pilot3.tar.gz
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc      5111 Apr 19 09:08 queuedata.json
[2025-04-19 20:57:22] -rwx------ 1 boinc boinc     37140 Apr 19 09:08 runpilot2-wrapper.sh
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc       100 Apr 19 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 20:57:22] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 19:19 run_atlas
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc       105 Apr 19 19:19 job.xml
[2025-04-19 20:57:22] -rw-r--r-- 2 boinc boinc 227053263 Apr 19 19:19 EVNT.44075481._003076.pool.root.1
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc      6683 Apr 19 19:19 init_data.xml
[2025-04-19 20:57:22] drwxrwx--x 2 boinc boinc      4096 Apr 19 19:19 shared
[2025-04-19 20:57:22] -rw-r--r-- 2 boinc boinc    508888 Apr 19 19:19 input.tar.gz
[2025-04-19 20:57:22] -rw-r--r-- 2 boinc boinc     17569 Apr 19 19:19 start_atlas.sh
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc         0 Apr 19 19:19 boinc_lockfile
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc      2578 Apr 19 19:19 pandaJob.out
[2025-04-19 20:57:22] -rw------- 1 boinc boinc       424 Apr 19 19:19 setup.sh.local
[2025-04-19 20:57:22] -rw------- 1 boinc boinc    991244 Apr 19 19:20 agis_schedconf.cvmfs.json
[2025-04-19 20:57:22] -rw------- 1 boinc boinc   1618536 Apr 19 19:20 agis_ddmendpoints.agis.ALL.json
[2025-04-19 20:57:22] drwx------ 4 boinc boinc      4096 Apr 19 19:20 pilot3
[2025-04-19 20:57:22] -rw------- 1 boinc boinc 193042195 Apr 19 20:56 HITS.44075483._079297.pool.root.1
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc       529 Apr 19 20:56 boinc_task_state.xml
[2025-04-19 20:57:22] -rw------- 1 boinc boinc        95 Apr 19 20:56 pilot_heartbeat.json
[2025-04-19 20:57:22] -rw------- 1 boinc boinc      1022 Apr 19 20:56 memory_monitor_summary.json
[2025-04-19 20:57:22] -rw------- 1 boinc boinc    241466 Apr 19 20:56 log.44075483._079297.job.log.tgz.1
[2025-04-19 20:57:22] -rw------- 1 boinc boinc      7669 Apr 19 20:56 heartbeat.json
[2025-04-19 20:57:22] -rw------- 1 boinc boinc      4543 Apr 19 20:57 pilotlog.txt
[2025-04-19 20:57:22] -rw------- 1 boinc boinc    556848 Apr 19 20:57 log.44075483._079297.job.log.1
[2025-04-19 20:57:22] -rw------- 1 boinc boinc       357 Apr 19 20:57 output.list
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc       620 Apr 19 20:57 runtime_log
[2025-04-19 20:57:22] -rw------- 1 boinc boinc    819200 Apr 19 20:57 result.tar.gz
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc     11119 Apr 19 20:57 runtime_log.err
[2025-04-19 20:57:22] -rw------- 1 boinc boinc       662 Apr 19 20:57 KCRLDmsUHQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm3F6KDmbE7W3n.diag
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc      8192 Apr 19 20:57 boinc_mmap_file
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc        27 Apr 19 20:57 wrapper_checkpoint.txt
[2025-04-19 20:57:22] -rw-r--r-- 1 boinc boinc     21475 Apr 19 20:57 stderr.txt
[2025-04-19 20:57:22] HITS file was successfully produced:
[2025-04-19 20:57:22] -rw------- 1 boinc boinc 193042195 Apr 19 20:56 shared/HITS.pool.root.1
[2025-04-19 20:57:22]  *** Contents of shared directory: ***
[2025-04-19 20:57:22] total 411576
[2025-04-19 20:57:22] -rw-r--r-- 2 boinc boinc 227053263 Apr 19 19:19 ATLAS.root_0
[2025-04-19 20:57:22] -rw-r--r-- 2 boinc boinc    508888 Apr 19 19:19 input.tar.gz
[2025-04-19 20:57:22] -rw-r--r-- 2 boinc boinc     17569 Apr 19 19:19 start_atlas.sh
[2025-04-19 20:57:22] -rw------- 1 boinc boinc 193042195 Apr 19 20:56 HITS.pool.root.1
[2025-04-19 20:57:22] -rw------- 1 boinc boinc    819200 Apr 19 20:57 result.tar.gz
20:57:24 (1350385): run_atlas exited; CPU time 15420.851800
20:57:24 (1350385): called boinc_finish(0)

</stderr_txt>
]]>

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