Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:43 (57552): wrapper (7.7.26015): starting
07:11:43 (57552): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 07:11:43] Arguments: --nthreads 9
[2025-04-19 07:11:43] Threads: 9
[2025-04-19 07:11:43] Checking for CVMFS
[2025-04-19 07:11:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 07:11:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 07:11:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 07:11:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 07:11:47] 2.11.2.0 52267 42329 141368 145036 2 119 13549863 18432001 16873 130560 0 146575295 98.385 498654881 43507 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 07:11:47] CVMFS is ok
[2025-04-19 07:11:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 07:11:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 07:11:47] Further information can be found at the LHC@home message board.
[2025-04-19 07:11:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 07:11:47] Checking for apptainer binary...
[2025-04-19 07:11:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 07:11:47] Running /usr/bin/apptainer --version
[2025-04-19 07:11:47] apptainer version 1.3.2-1.el7
[2025-04-19 07:11:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 07:12:28] c-210-33-1.aglt2.org
[2025-04-19 07:12:28] apptainer works
[2025-04-19 07:12:28] Set ATHENA_PROC_NUMBER=9
[2025-04-19 07:12:28] Set ATHENA_CORE_NUMBER=9
[2025-04-19 07:12:28] Starting ATLAS job with PandaID=6607510325
[2025-04-19 07:12:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 12:10:09]  *** The last 200 lines of the pilot log: ***
[2025-04-19 12:10:09] 2025-04-19 16:09:46,475 | INFO     | mean x: 1745070157.267148
[2025-04-19 12:10:09] 2025-04-19 16:09:46,475 | INFO     | mean y: 2403482.0216606497
[2025-04-19 12:10:09] 2025-04-19 16:09:46,475 | INFO     | -- intersect: -79816786282.66272
[2025-04-19 12:10:09] 2025-04-19 16:09:46,475 | INFO     | intersect: -79816786282.66272
[2025-04-19 12:10:09] 2025-04-19 16:09:46,480 | INFO     | chi2: 10.127901243502269
[2025-04-19 12:10:09] 2025-04-19 16:09:46,480 | INFO     | current chi2=10.127901243502269 (change=6.888410133309162 %)
[2025-04-19 12:10:09] 2025-04-19 16:09:46,480 | INFO     | right removable region: 276
[2025-04-19 12:10:09] 2025-04-19 16:09:46,481 | INFO     | sum of square deviations: 6590856270.693121
[2025-04-19 12:10:09] 2025-04-19 16:09:46,483 | INFO     | sum of deviations: 196070274558.18427
[2025-04-19 12:10:09] 2025-04-19 16:09:46,483 | INFO     | mean x: 1745070462.2707582
[2025-04-19 12:10:09] 2025-04-19 16:09:46,484 | INFO     | mean y: 2436695.837545126
[2025-04-19 12:10:09] 2025-04-19 16:09:46,484 | INFO     | -- intersect: -51911370950.406654
[2025-04-19 12:10:09] 2025-04-19 16:09:46,488 | INFO     | intersect: -51911370950.406654
[2025-04-19 12:10:09] 2025-04-19 16:09:46,489 | INFO     | chi2: 6.353752335644896
[2025-04-19 12:10:09] 2025-04-19 16:09:46,489 | INFO     | current chi2=6.353752335644896 (change=41.58632007093741 %)
[2025-04-19 12:10:09] 2025-04-19 16:09:46,489 | INFO     | sum of square deviations: 6240352405.31982
[2025-04-19 12:10:09] 2025-04-19 16:09:46,492 | INFO     | sum of deviations: 127812157417.52571
[2025-04-19 12:10:09] 2025-04-19 16:09:46,492 | INFO     | mean x: 1745070614.7757354
[2025-04-19 12:10:09] 2025-04-19 16:09:46,492 | INFO     | mean y: 2466365.7463235296
[2025-04-19 12:10:09] 2025-04-19 16:09:46,492 | INFO     | -- intersect: -35739303591.07132
[2025-04-19 12:10:09] 2025-04-19 16:09:46,492 | INFO     | intersect: -35739303591.07132
[2025-04-19 12:10:09] 2025-04-19 16:09:46,493 | INFO     | chi2: 4.051665067062998
[2025-04-19 12:10:09] 2025-04-19 16:09:46,493 | INFO     | current chi2=4.051665067062998 (change=36.23193267491815 %)
[2025-04-19 12:10:09] 2025-04-19 16:09:46,493 | INFO     | sum of square deviations: 5902499939.932579
[2025-04-19 12:10:09] 2025-04-19 16:09:46,499 | INFO     | sum of deviations: 73055164549.23596
[2025-04-19 12:10:09] 2025-04-19 16:09:46,500 | INFO     | mean x: 1745070767.2808988
[2025-04-19 12:10:09] 2025-04-19 16:09:46,500 | INFO     | mean y: 2491083.1835205993
[2025-04-19 12:10:09] 2025-04-19 16:09:46,500 | INFO     | -- intersect: -21596226977.154778
[2025-04-19 12:10:09] 2025-04-19 16:09:46,500 | INFO     | intersect: -21596226977.154778
[2025-04-19 12:10:09] 2025-04-19 16:09:46,500 | INFO     | chi2: 2.6228871006805496
[2025-04-19 12:10:09] 2025-04-19 16:09:46,500 | INFO     | current chi2=2.6228871006805496 (change=35.263970311794594 %)
[2025-04-19 12:10:09] 2025-04-19 16:09:46,501 | INFO     | sum of square deviations: 5577066312.030508
[2025-04-19 12:10:09] 2025-04-19 16:09:46,507 | INFO     | sum of deviations: 19431845713.8397
[2025-04-19 12:10:09] 2025-04-19 16:09:46,507 | INFO     | mean x: 1745070919.7862597
[2025-04-19 12:10:09] 2025-04-19 16:09:46,508 | INFO     | mean y: 2516213.6221374045
[2025-04-19 12:10:09] 2025-04-19 16:09:46,508 | INFO     | -- intersect: -6077732249.597038
[2025-04-19 12:10:09] 2025-04-19 16:09:46,508 | INFO     | intersect: -6077732249.597038
[2025-04-19 12:10:09] 2025-04-19 16:09:46,508 | INFO     | chi2: 1.2319870853046408
[2025-04-19 12:10:09] 2025-04-19 16:09:46,508 | INFO     | current chi2=1.2319870853046408 (change=53.02935132110787 %)
[2025-04-19 12:10:09] 2025-04-19 16:09:46,509 | INFO     | sum of square deviations: 5263818959.112841
[2025-04-19 12:10:09] 2025-04-19 16:09:46,511 | INFO     | sum of deviations: -4449457968.649799
[2025-04-19 12:10:09] 2025-04-19 16:09:46,511 | INFO     | mean x: 1745071072.2918289
[2025-04-19 12:10:09] 2025-04-19 16:09:46,515 | INFO     | mean y: 2527817.5953307394
[2025-04-19 12:10:09] 2025-04-19 16:09:46,515 | INFO     | -- intersect: 1477620416.4824646
[2025-04-19 12:10:09] 2025-04-19 16:09:46,515 | INFO     | intersect: 1477620416.4824646
[2025-04-19 12:10:09] 2025-04-19 16:09:46,516 | INFO     | chi2: 0.9475391383182019
[2025-04-19 12:10:09] 2025-04-19 16:09:46,516 | INFO     | current chi2=0.9475391383182019 (change=23.088549415767762 %)
[2025-04-19 12:10:09] 2025-04-19 16:09:46,516 | INFO     | left removable region: 50
[2025-04-19 12:10:09] 2025-04-19 16:09:46,516 | INFO     | sum of square deviations: 3579577936.194711
[2025-04-19 12:10:09] 2025-04-19 16:09:46,517 | INFO     | sum of deviations: 5094385547.522123
[2025-04-19 12:10:09] 2025-04-19 16:09:46,518 | INFO     | mean x: 1745071651.8141594
[2025-04-19 12:10:09] 2025-04-19 16:09:46,518 | INFO     | mean y: 2539586.274336283
[2025-04-19 12:10:09] 2025-04-19 16:09:46,518 | INFO     | -- intersect: -2481012374.559137
[2025-04-19 12:10:09] 2025-04-19 16:09:46,522 | INFO     | intersect: -2481012374.559137
[2025-04-19 12:10:09] 2025-04-19 16:09:46,523 | INFO     | chi2: 0.010719474647673699
[2025-04-19 12:10:09] 2025-04-19 16:09:46,523 | INFO     | -- intersect: -2481012374.559137
[2025-04-19 12:10:09] 2025-04-19 16:09:46,523 | INFO     | current memory leak: 1.42 B/s (using 226 data points, chi2=0.01)
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | ..............................
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | . Timing measurements:
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | . get job = 0 s
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | . initial setup = 21 s
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | . payload setup = 146 s
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | . stage-in = 0 s
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | . payload execution = 17270 s
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | . stage-out = 3 s
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | . log creation = 1 s
[2025-04-19 12:10:09] 2025-04-19 16:09:46,524 | INFO     | ..............................
[2025-04-19 12:10:09] 2025-04-19 16:09:47,088 | INFO     | 
[2025-04-19 12:10:09] 2025-04-19 16:09:47,088 | INFO     | job summary report
[2025-04-19 12:10:09] 2025-04-19 16:09:47,088 | INFO     | --------------------------------------------------
[2025-04-19 12:10:09] 2025-04-19 16:09:47,088 | INFO     | PanDA job id: 6607510325
[2025-04-19 12:10:09] 2025-04-19 16:09:47,088 | INFO     | task id: 44075483
[2025-04-19 12:10:09] 2025-04-19 16:09:47,088 | INFO     | errors: (none)
[2025-04-19 12:10:09] 2025-04-19 16:09:47,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | pilot state: finished 
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | transexitcode: 0
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | exeerrorcode: 0
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | exeerrordiag: 
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | exitcode: 0
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | exitmsg: OK
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | cpuconsumptiontime: 42165 s
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | nevents: 400
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | neventsw: 0
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | pid: 110749
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | pgrp: 110749
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | corecount: 9
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | event service: False
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | sizes: {0: 2425995, 1: 2426680, 2: 2426765, 3: 2426907, 14: 2426907, 25: 2426935, 37: 2427091, 48: 2427119, 59: 2427147, 70: 2427175, 74: 2427409, 81: 2427717, 174
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | --------------------------------------------------
[2025-04-19 12:10:09] 2025-04-19 16:09:47,089 | INFO     | 
[2025-04-19 12:10:09] 2025-04-19 16:09:47,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | job 6607510325 has completed (purged errors)
[2025-04-19 12:10:09] 2025-04-19 16:09:47,405 | INFO     | overall cleanup function is called
[2025-04-19 12:10:09] 2025-04-19 16:09:48,422 | INFO     | --- collectZombieJob: --- 10, [110749]
[2025-04-19 12:10:09] 2025-04-19 16:09:48,422 | INFO     | zombie collector waiting for pid 110749
[2025-04-19 12:10:09] 2025-04-19 16:09:48,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 12:10:09] 2025-04-19 16:09:48,422 | INFO     | collected zombie processes
[2025-04-19 12:10:09] 2025-04-19 16:09:48,422 | INFO     | will attempt to kill all subprocesses of pid=110749
[2025-04-19 12:10:09] 2025-04-19 16:09:49,846 | INFO     | process IDs to be killed: [110749] (in reverse order)
[2025-04-19 12:10:09] 2025-04-19 16:09:51,188 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 12:10:09] 2025-04-19 16:09:51,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 12:10:09] 2025-04-19 16:09:51,212 | INFO     | did not find any defunct processes belonging to 110749
[2025-04-19 12:10:09] 2025-04-19 16:09:51,221 | INFO     | did not find any defunct processes belonging to 110749
[2025-04-19 12:10:09] 2025-04-19 16:09:51,222 | INFO     | ready for new job
[2025-04-19 12:10:09] 2025-04-19 16:09:51,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 12:10:09] 2025-04-19 16:09:51,238 | INFO     | **************************************
[2025-04-19 12:10:09] 2025-04-19 16:09:51,239 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 12:10:09] 2025-04-19 16:09:51,239 | INFO     | **************************************
[2025-04-19 12:10:09] 2025-04-19 16:09:51,239 | INFO     | 
[2025-04-19 12:10:09] 2025-04-19 16:09:51,284 | INFO     | architecture information:
[2025-04-19 12:10:09] 2025-04-19 16:09:51,329 | INFO     | executing command: cat /etc/os-release
[2025-04-19 12:10:09] 2025-04-19 16:09:51,780 | INFO     | cat /etc/os-release:
[2025-04-19 12:10:09] NAME="CentOS Linux"
[2025-04-19 12:10:09] VERSION="7 (Core)"
[2025-04-19 12:10:09] ID="centos"
[2025-04-19 12:10:09] ID_LIKE="rhel fedora"
[2025-04-19 12:10:09] VERSION_ID="7"
[2025-04-19 12:10:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 12:10:09] ANSI_COLOR="0;31"
[2025-04-19 12:10:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 12:10:09] HOME_URL="https://www.centos.org/"
[2025-04-19 12:10:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 12:10:09] 
[2025-04-19 12:10:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 12:10:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 12:10:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 12:10:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 12:10:09] 
[2025-04-19 12:10:09] 2025-04-19 16:09:51,780 | INFO     | **************************************
[2025-04-19 12:10:09] 2025-04-19 16:09:52,283 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-19 12:10:09] 2025-04-19 16:09:52,481 | INFO     | sufficient remaining disk space (56331599872 B)
[2025-04-19 12:10:09] 2025-04-19 16:09:52,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 12:10:09] 2025-04-19 16:09:52,481 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 12:10:09] 2025-04-19 16:09:52,482 | INFO     | update_server=False
[2025-04-19 12:10:09] 2025-04-19 16:09:52,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 12:10:09] 2025-04-19 16:09:52,485 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 12:10:09] 2025-04-19 16:09:52,485 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 12:10:09] 2025-04-19 16:09:52,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 12:10:09] 2025-04-19 16:09:52,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 12:10:09] 2025-04-19 16:09:52,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:10:09] 2025-04-19 16:09:52,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:10:09] 2025-04-19 16:09:52,491 | INFO     | aborting loop
[2025-04-19 12:10:09] 2025-04-19 16:09:52,849 | INFO     | all payload control threads have been joined
[2025-04-19 12:10:09] 2025-04-19 16:09:52,981 | INFO     | all job control threads have been joined
[2025-04-19 12:10:09] 2025-04-19 16:09:53,388 | INFO     | all data control threads have been joined
[2025-04-19 12:10:09] 2025-04-19 16:09:53,506 | INFO     | [job] retrieve thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:53,511 | INFO     | [job] queue monitor thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:53,516 | INFO     | [job] job monitor thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:53,593 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:53,634 | INFO     | [job] validate thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:53,855 | INFO     | [payload] control thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:53,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 12:10:09] 2025-04-19 16:09:53,992 | INFO     | [job] control thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:54,145 | INFO     | [payload] validate_post thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:54,397 | INFO     | [data] control thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:54,535 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:54,555 | INFO     | [data] copytool_in thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:54,562 | INFO     | [payload] failed_post thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:54,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:54,822 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:54,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 12:10:09] 2025-04-19 16:09:55,933 | INFO     | [data] copytool_out thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:09:58,961 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 12:10:09] 2025-04-19 16:10:00,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477759285056)>', '<ExcThread(monitor, started 140477240178432)>']
[2025-04-19 12:10:09] 2025-04-19 16:10:00,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 12:10:09] 2025-04-19 16:10:00,544 | INFO     | [monitor] control thread has ended
[2025-04-19 12:10:09] 2025-04-19 16:10:05,256 | INFO     | all workflow threads have been joined
[2025-04-19 12:10:09] 2025-04-19 16:10:05,256 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 12:10:09] 2025-04-19 16:10:05,256 | INFO     | traces error code: 0
[2025-04-19 12:10:09] 2025-04-19 16:10:05,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 12:10:09] 2025-04-19 16:10:06,408 [wrapper] ==== pilot stdout END ====
[2025-04-19 12:10:09] 2025-04-19 16:10:06,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 12:10:09] 2025-04-19 16:10:06,650 [wrapper] pilotpid: 78673
[2025-04-19 12:10:09] 2025-04-19 16:10:06,692 [wrapper] Pilot exit status: 0
[2025-04-19 12:10:09] 2025-04-19 16:10:07,048 [wrapper] pandaids: 6607510325
[2025-04-19 12:10:09] 2025-04-19 16:10:07,432 [wrapper] cleanup supervisor_pilot 188485 78674
[2025-04-19 12:10:09] 2025-04-19 16:10:07,440 [wrapper] Test setup, not cleaning
[2025-04-19 12:10:09] 2025-04-19 16:10:07,485 [wrapper] apfmon messages muted
[2025-04-19 12:10:09] 2025-04-19 16:10:07,524 [wrapper] ==== wrapper stdout END ====
[2025-04-19 12:10:09] 2025-04-19 16:10:07,569 [wrapper] ==== wrapper stderr END ====
[2025-04-19 12:10:09]  *** Error codes and diagnostics ***
[2025-04-19 12:10:09]     "exeErrorCode": 0,
[2025-04-19 12:10:09]     "exeErrorDiag": "",
[2025-04-19 12:10:09]     "pilotErrorCode": 0,
[2025-04-19 12:10:09]     "pilotErrorDiag": "",
[2025-04-19 12:10:09]  *** Listing of results directory ***
[2025-04-19 12:10:09] total 423620
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 03:03 queuedata.json
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 03:04 pilot3.tar.gz
[2025-04-19 12:10:09] -rwx------ 1 boincer umatlas     37140 Apr 19 03:05 runpilot2-wrapper.sh
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas       100 Apr 19 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 12:10:09] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 07:11 run_atlas
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas       105 Apr 19 07:11 job.xml
[2025-04-19 12:10:09] -rw-r--r-- 2 boincer umatlas 227053263 Apr 19 07:11 EVNT.44075481._003076.pool.root.1
[2025-04-19 12:10:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 07:11 start_atlas.sh
[2025-04-19 12:10:09] drwxrwx--x 2 boincer umatlas      4096 Apr 19 07:11 shared
[2025-04-19 12:10:09] -rw-r--r-- 2 boincer umatlas    508887 Apr 19 07:11 input.tar.gz
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas         0 Apr 19 07:11 boinc_lockfile
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 07:12 pandaJob.out
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas       467 Apr 19 07:13 setup.sh.local
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas    991292 Apr 19 07:15 agis_schedconf.cvmfs.json
[2025-04-19 12:10:09] drwx------ 4 boincer umatlas      4096 Apr 19 07:15 pilot3
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas      6355 Apr 19 12:02 init_data.xml
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas 199076043 Apr 19 12:06 HITS.44075483._079294.pool.root.1
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas       531 Apr 19 12:07 boinc_task_state.xml
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas      1065 Apr 19 12:08 memory_monitor_summary.json
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas   1618536 Apr 19 12:08 agis_ddmendpoints.agis.ALL.json
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas    438080 Apr 19 12:08 log.44075483._079294.job.log.tgz.1
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas        95 Apr 19 12:08 pilot_heartbeat.json
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas      7770 Apr 19 12:09 heartbeat.json
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas      4476 Apr 19 12:10 pilotlog.txt
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 12:10 boinc_mmap_file
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas        28 Apr 19 12:10 wrapper_checkpoint.txt
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas   1457823 Apr 19 12:10 log.44075483._079294.job.log.1
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas       357 Apr 19 12:10 output.list
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas       620 Apr 19 12:10 runtime_log
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas   1914880 Apr 19 12:10 result.tar.gz
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas     11429 Apr 19 12:10 runtime_log.err
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas       664 Apr 19 12:10 gVlLDmmRHQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmpF6KDmH7CIin.diag
[2025-04-19 12:10:09] -rw-r--r-- 1 boincer umatlas     20902 Apr 19 12:10 stderr.txt
[2025-04-19 12:10:09] HITS file was successfully produced:
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas 199076043 Apr 19 12:06 shared/HITS.pool.root.1
[2025-04-19 12:10:09]  *** Contents of shared directory: ***
[2025-04-19 12:10:09] total 418544
[2025-04-19 12:10:09] -rw-r--r-- 2 boincer umatlas 227053263 Apr 19 07:11 ATLAS.root_0
[2025-04-19 12:10:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 07:11 start_atlas.sh
[2025-04-19 12:10:09] -rw-r--r-- 2 boincer umatlas    508887 Apr 19 07:11 input.tar.gz
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas 199076043 Apr 19 12:06 HITS.pool.root.1
[2025-04-19 12:10:09] -rw------- 1 boincer umatlas   1914880 Apr 19 12:10 result.tar.gz
12:10:10 (57552): run_atlas exited; CPU time 42587.024348
12:10:10 (57552): called boinc_finish(0)

</stderr_txt>
]]>

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