Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 12:43:22 (15844): Detected: vboxwrapper 26206
2025-04-19 12:43:22 (15844): Detected: BOINC client v8.0.2
2025-04-19 12:43:23 (15844): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-04-19 12:43:23 (15844): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 12:43:24 (15844): Create VM. (boinc_100fe1f5f33188dd, slot#4)
2025-04-19 12:43:24 (15844): Setting Memory Size for VM. (4400MB)
2025-04-19 12:43:24 (15844): Setting CPU Count for VM. (4)
2025-04-19 12:43:25 (15844): Setting Chipset Options for VM.
2025-04-19 12:43:25 (15844): Setting Graphics Controller Options for VM.
2025-04-19 12:43:25 (15844): Setting Boot Options for VM.
2025-04-19 12:43:26 (15844): Setting Network Configuration for NAT.
2025-04-19 12:43:26 (15844): Enabling VM Network Access.
2025-04-19 12:43:26 (15844): Disabling USB Support for VM.
2025-04-19 12:43:26 (15844): Disabling COM Port Support for VM.
2025-04-19 12:43:27 (15844): Disabling LPT Port Support for VM.
2025-04-19 12:43:27 (15844): Disabling Audio Support for VM.
2025-04-19 12:43:27 (15844): Disabling Clipboard Support for VM.
2025-04-19 12:43:27 (15844): Disabling Drag and Drop Support for VM.
2025-04-19 12:43:28 (15844): Adding storage controller(s) to VM.
2025-04-19 12:43:28 (15844): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 12:43:31 (15844): Adding VirtualBox Guest Additions to VM.
2025-04-19 12:43:31 (15844): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 12:43:31 (15844): forwarding host port 65278 to guest port 80
2025-04-19 12:43:32 (15844): Enabling remote desktop for VM.
2025-04-19 12:43:32 (15844): Enabling shared directory for VM.
2025-04-19 12:43:33 (15844): Starting VM using VBoxManage interface. (boinc_100fe1f5f33188dd, slot#4)
2025-04-19 12:43:40 (15844): Successfully started VM. (PID = '15196')
2025-04-19 12:43:40 (15844): Reporting VM Process ID to BOINC.
2025-04-19 12:43:40 (15844): Guest Log: BIOS: VirtualBox 7.0.12
2025-04-19 12:43:40 (15844): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 12:43:40 (15844): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 12:43:40 (15844): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 12:43:40 (15844): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 12:43:40 (15844): Detected: Web Application Enabled (http://localhost:65278)
2025-04-19 12:43:40 (15844): Detected: Remote Desktop Enabled (localhost:65279)
2025-04-19 12:43:40 (15844): Preference change detected
2025-04-19 12:43:40 (15844): Setting CPU throttle for VM. (100%)
2025-04-19 12:43:40 (15844): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 12:43:42 (15844): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 12:43:42 (15844): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 12:43:45 (15844): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 12:43:45 (15844): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 12:43:45 (15844): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 12:43:51 (15844): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 12:43:51 (15844): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 12:43:58 (15844): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 12:43:58 (15844): Guest Log: 00:00:00.000171 main     Log opened 2025-04-19T12:43:56.369744000Z
2025-04-19 12:43:58 (15844): Guest Log: 00:00:00.000316 main     OS Product: Linux
2025-04-19 12:43:58 (15844): Guest Log: 00:00:00.000370 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 12:43:58 (15844): Guest Log: 00:00:00.000419 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 12:43:58 (15844): Guest Log: 00:00:00.000463 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 12:43:58 (15844): Guest Log: 00:00:00.000464 main     Process ID: 1300
2025-04-19 12:43:58 (15844): Guest Log: 00:00:00.000464 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 12:43:58 (15844): Guest Log: 00:00:00.001202 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 12:43:58 (15844): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 12:43:58 (15844): Guest Log: [INFO] Mounting shared directory
2025-04-19 12:43:58 (15844): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 12:44:08 (15844): Guest Log: 00:00:10.003610 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 017 459 000ns (GuestNow=1 745 059 447 354 790 000 ns GuestLast=1 745 066 636 372 249 000 ns fSetTimeLastLoop=true )
2025-04-19 12:44:54 (15844): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 12:44:54 (15844): Guest Log: [INFO] Detected branch: prod
2025-04-19 12:44:54 (15844): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 12:44:54 (15844): Guest Log: Copying input files
2025-04-19 12:44:55 (15844): Guest Log: Copied input files into RunAtlas.
2025-04-19 12:44:55 (15844): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 12:44:55 (15844): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 12:44:55 (15844): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 12:44:55 (15844): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 12:45:32 (15844): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 12:45:32 (15844): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 12:45:32 (15844): Guest Log: 2.6.3.0 1600 0 32032 145035 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 12:45:33 (15844): Guest Log: copied the webapp to /var/www
2025-04-19 12:45:33 (15844): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-19 12:45:33 (15844): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-19 12:45:34 (15844): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 12:45:34 (15844): Guest Log:  *** Starting ATLAS job. (PandaID=6607510157 taskID=44075483) ***
2025-04-19 12:51:46 (15844): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 12:52:06 (15844): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 12:56:35 (15844): Guest Log:  *** Job finished ***
2025-04-19 12:56:35 (15844): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:04,830 | INFO     | [payload] validate_pre thread has finished
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:04,888 | INFO     | [payload] failed_post thread has finished
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:06,766 | INFO     | [data] queue_monitor thread has finished
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:07,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518514988864)>', '<ExcThread(monitor, started 140518059120384)>']
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:07,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:07,208 | INFO     | [monitor] control thread has ended
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,117 | INFO     | all workflow threads have been joined
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,118 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,118 | INFO     | traces error code: 0
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,237 [wrapper] ==== pilot stdout END ====
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,242 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,247 [wrapper] pilotpid: 5960
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,252 [wrapper] Pilot exit status: 0
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,562 [wrapper] pandaids: 6607510157
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,663 [wrapper] cleanup supervisor_pilot  5966 5961
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,672 [wrapper] Test setup, not cleaning
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,680 [wrapper] apfmon messages muted
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,689 [wrapper] ==== wrapper stdout END ====
2025-04-19 12:56:35 (15844): Guest Log: 2025-04-19 10:56:12,697 [wrapper] ==== wrapper stderr END ====
2025-04-19 12:56:35 (15844): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 12:56:35 (15844): Guest Log:     "exeErrorCode": 65,
2025-04-19 12:56:35 (15844): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-19 12:56:35 (15844): Guest Log:     "pilotErrorCode": 1305,
2025-04-19 12:56:35 (15844): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-19 12:56:35 (15844): Guest Log:  *** Listing of results directory ***
2025-04-19 12:56:35 (15844): Guest Log: total 3912
2025-04-19 12:56:35 (15844): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 19 06:42 pilot3.tar.gz
2025-04-19 12:56:35 (15844): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 19 06:52 queuedata.json
2025-04-19 12:56:35 (15844): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 19 06:52 runpilot2-wrapper.sh
2025-04-19 12:56:35 (15844): Guest Log: -rwxr-xr-x. 1 atlas atlas    8159 Apr 19 10:44 init_data.xml
2025-04-19 12:56:35 (15844): Guest Log: -rwxr-xr-x. 1 atlas atlas  508881 Apr 19 10:44 input.tar.gz
2025-04-19 12:56:35 (15844): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 19 10:44 start_atlas.sh
2025-04-19 12:56:35 (15844): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 19 10:44 EVNT.44075481._003069.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 12:56:35 (15844): Guest Log: -rw-r--r--. 1 atlas atlas    2578 Apr 19 10:45 pandaJob.out
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas     424 Apr 19 10:45 setup.sh.local
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas  991292 Apr 19 10:49 agis_schedconf.cvmfs.json
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas 1618536 Apr 19 10:49 agis_ddmendpoints.agis.ALL.json
2025-04-19 12:56:35 (15844): Guest Log: drwx------. 4 atlas atlas    4096 Apr 19 10:50 pilot3
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas    1009 Apr 19 10:53 memory_monitor_summary.json
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas   21343 Apr 19 10:53 log.44075483._079130.job.log.tgz.1
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas      95 Apr 19 10:55 pilot_heartbeat.json
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas    8406 Apr 19 10:56 heartbeat.json
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas    4413 Apr 19 10:56 pilotlog.txt
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas   84912 Apr 19 10:56 log.44075483._079130.job.log.1
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas     188 Apr 19 10:56 output.list
2025-04-19 12:56:35 (15844): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 19 10:56 runtime_log
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas  122880 Apr 19 10:56 result.tar.gz
2025-04-19 12:56:35 (15844): Guest Log: -rw-r--r--. 1 atlas atlas   10815 Apr 19 10:56 runtime_log.err
2025-04-19 12:56:35 (15844): Guest Log: -rw-------. 1 atlas atlas     650 Apr 19 10:56 KceKDmsEHQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm1E6KDmV8m0on.diag
2025-04-19 12:56:36 (15844): Guest Log: Looking for outputfile HITS.44075483._079130.pool.root.1
2025-04-19 12:56:36 (15844): Guest Log: No HITS file was produced
2025-04-19 12:56:36 (15844): Guest Log: Successfully finished the ATLAS job!
2025-04-19 12:56:36 (15844): Guest Log: Copying the results back to the shared directory!
2025-04-19 12:56:36 (15844): Guest Log:  *** Contents of shared directory: ***
2025-04-19 12:56:36 (15844): Guest Log: total 220188
2025-04-19 12:56:36 (15844): Guest Log: -rwxrwxrwx. 1 root root 224805260 Apr 19 10:43 ATLAS.root_0
2025-04-19 12:56:36 (15844): Guest Log: -rwxrwxrwx. 1 root root      8159 Apr 19 10:43 init_data.xml
2025-04-19 12:56:36 (15844): Guest Log: -rwxrwxrwx. 1 root root    508881 Apr 19 09:41 input.tar.gz
2025-04-19 12:56:36 (15844): Guest Log: -rwxrwxrwx. 1 root root    122880 Apr 19  2025 result.tar.gz
2025-04-19 12:56:36 (15844): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 19 09:41 start_atlas.sh
2025-04-19 12:56:36 (15844): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 12:56:36 (15844): VM Completion File Detected.
2025-04-19 12:56:36 (15844): Powering off VM.
2025-04-19 12:56:37 (15844): Successfully stopped VM.
2025-04-19 12:56:37 (15844): Deregistering VM. (boinc_100fe1f5f33188dd, slot#4)
2025-04-19 12:56:37 (15844): Removing network bandwidth throttle group from VM.
2025-04-19 12:56:37 (15844): Removing VM from VirtualBox.
12:56:42 (15844): called boinc_finish(0)

</stderr_txt>
]]>

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