Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:33:59 (244718): wrapper (7.7.26015): starting
05:33:59 (244718): wrapper: running run_atlas (--nthreads 9)
[2025-04-19 05:33:59] Arguments: --nthreads 9
[2025-04-19 05:33:59] Threads: 9
[2025-04-19 05:33:59] Checking for CVMFS
[2025-04-19 05:33:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 05:34:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 05:34:00] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 05:34:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 05:34:00] 2.11.2.0 108356 42267 174396 145033 2 505 14500572 18432001 13005 130560 0 122771584 98.474 400752917 44241 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 05:34:00] CVMFS is ok
[2025-04-19 05:34:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 05:34:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 05:34:00] Further information can be found at the LHC@home message board.
[2025-04-19 05:34:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 05:34:00] Checking for apptainer binary...
[2025-04-19 05:34:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 05:34:00] Running /usr/bin/apptainer --version
[2025-04-19 05:34:00] apptainer version 1.3.2-1.el7
[2025-04-19 05:34:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 05:34:01] c-210-35-2.aglt2.org
[2025-04-19 05:34:01] apptainer works
[2025-04-19 05:34:01] Set ATHENA_PROC_NUMBER=9
[2025-04-19 05:34:01] Set ATHENA_CORE_NUMBER=9
[2025-04-19 05:34:01] Starting ATLAS job with PandaID=6607432153
[2025-04-19 05:34:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 09:20:45]  *** The last 200 lines of the pilot log: ***
[2025-04-19 09:20:45] 2025-04-19 13:20:29,053 | INFO     | -- intersect: -73652427626.9391
[2025-04-19 09:20:45] 2025-04-19 13:20:29,053 | INFO     | intersect: -73652427626.9391
[2025-04-19 09:20:45] 2025-04-19 13:20:29,054 | INFO     | chi2: 6.2426676595746535
[2025-04-19 09:20:45] 2025-04-19 13:20:29,054 | INFO     | sum of square deviations: 3168531091.98157
[2025-04-19 09:20:45] 2025-04-19 13:20:29,064 | INFO     | sum of deviations: 154632592428.96307
[2025-04-19 09:20:45] 2025-04-19 13:20:29,065 | INFO     | mean x: 1745061872.1520736
[2025-04-19 09:20:45] 2025-04-19 13:20:29,065 | INFO     | mean y: 2425083.3041474656
[2025-04-19 09:20:45] 2025-04-19 13:20:29,065 | INFO     | -- intersect: -85161151793.90973
[2025-04-19 09:20:45] 2025-04-19 13:20:29,065 | INFO     | intersect: -85161151793.90973
[2025-04-19 09:20:45] 2025-04-19 13:20:29,065 | INFO     | chi2: 5.433135211580568
[2025-04-19 09:20:45] 2025-04-19 13:20:29,066 | INFO     | current chi2=5.433135211580568 (change=12.967732580677586 %)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,066 | INFO     | right removable region: 216
[2025-04-19 09:20:45] 2025-04-19 13:20:29,066 | INFO     | sum of square deviations: 3168510961.98157
[2025-04-19 09:20:45] 2025-04-19 13:20:29,068 | INFO     | sum of deviations: 83813786628.22588
[2025-04-19 09:20:45] 2025-04-19 13:20:29,068 | INFO     | mean x: 1745062177.1520736
[2025-04-19 09:20:45] 2025-04-19 13:20:29,068 | INFO     | mean y: 2457815.3870967743
[2025-04-19 09:20:45] 2025-04-19 13:20:29,068 | INFO     | -- intersect: -46158111210.178406
[2025-04-19 09:20:45] 2025-04-19 13:20:29,068 | INFO     | intersect: -46158111210.178406
[2025-04-19 09:20:45] 2025-04-19 13:20:29,068 | INFO     | chi2: 3.3722460607493967
[2025-04-19 09:20:45] 2025-04-19 13:20:29,068 | INFO     | current chi2=3.3722460607493967 (change=45.98068895150561 %)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,073 | INFO     | sum of square deviations: 2954487581.8632216
[2025-04-19 09:20:45] 2025-04-19 13:20:29,086 | INFO     | sum of deviations: 36778132150.372635
[2025-04-19 09:20:45] 2025-04-19 13:20:29,086 | INFO     | mean x: 1745062329.6556604
[2025-04-19 09:20:45] 2025-04-19 13:20:29,086 | INFO     | mean y: 2491334.7311320757
[2025-04-19 09:20:45] 2025-04-19 13:20:29,087 | INFO     | -- intersect: -21720440710.980286
[2025-04-19 09:20:45] 2025-04-19 13:20:29,087 | INFO     | intersect: -21720440710.980286
[2025-04-19 09:20:45] 2025-04-19 13:20:29,095 | INFO     | chi2: 1.7160037788911056
[2025-04-19 09:20:45] 2025-04-19 13:20:29,095 | INFO     | current chi2=1.7160037788911056 (change=49.113921464266845 %)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,096 | INFO     | sum of square deviations: 2750324851.7391167
[2025-04-19 09:20:45] 2025-04-19 13:20:29,116 | INFO     | sum of deviations: 8005923416.507256
[2025-04-19 09:20:45] 2025-04-19 13:20:29,116 | INFO     | mean x: 1745062482.1594203
[2025-04-19 09:20:45] 2025-04-19 13:20:29,116 | INFO     | mean y: 2512691.2270531403
[2025-04-19 09:20:45] 2025-04-19 13:20:29,116 | INFO     | -- intersect: -5077191468.212214
[2025-04-19 09:20:45] 2025-04-19 13:20:29,117 | INFO     | intersect: -5077191468.212214
[2025-04-19 09:20:45] 2025-04-19 13:20:29,120 | INFO     | chi2: 0.9552323692910878
[2025-04-19 09:20:45] 2025-04-19 13:20:29,120 | INFO     | current chi2=0.9552323692910878 (change=44.333900598495994 %)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,120 | INFO     | sum of square deviations: 2555790209.108915
[2025-04-19 09:20:45] 2025-04-19 13:20:29,121 | INFO     | sum of deviations: -2526854923.9207935
[2025-04-19 09:20:45] 2025-04-19 13:20:29,122 | INFO     | mean x: 1745062634.6633663
[2025-04-19 09:20:45] 2025-04-19 13:20:29,122 | INFO     | mean y: 2520949.118811881
[2025-04-19 09:20:45] 2025-04-19 13:20:29,122 | INFO     | -- intersect: 1727826921.1166914
[2025-04-19 09:20:45] 2025-04-19 13:20:29,122 | INFO     | intersect: 1727826921.1166914
[2025-04-19 09:20:45] 2025-04-19 13:20:29,122 | INFO     | chi2: 0.876749556821604
[2025-04-19 09:20:45] 2025-04-19 13:20:29,122 | INFO     | current chi2=0.876749556821604 (change=8.21609641722345 %)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,122 | INFO     | left removable region: 40
[2025-04-19 09:20:45] 2025-04-19 13:20:29,123 | INFO     | sum of square deviations: 1690487607.2215908
[2025-04-19 09:20:45] 2025-04-19 13:20:29,146 | INFO     | sum of deviations: 4215294489.477271
[2025-04-19 09:20:45] 2025-04-19 13:20:29,147 | INFO     | mean x: 1745063061.6647727
[2025-04-19 09:20:45] 2025-04-19 13:20:29,147 | INFO     | mean y: 2537940.4318181816
[2025-04-19 09:20:45] 2025-04-19 13:20:29,147 | INFO     | -- intersect: -4348842499.272066
[2025-04-19 09:20:45] 2025-04-19 13:20:29,147 | INFO     | intersect: -4348842499.272066
[2025-04-19 09:20:45] 2025-04-19 13:20:29,147 | INFO     | chi2: 0.0006057679495751317
[2025-04-19 09:20:45] 2025-04-19 13:20:29,147 | INFO     | -- intersect: -4348842499.272066
[2025-04-19 09:20:45] 2025-04-19 13:20:29,147 | INFO     | current memory leak: 2.49 B/s (using 176 data points, chi2=0.00)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,148 | INFO     | ..............................
[2025-04-19 09:20:45] 2025-04-19 13:20:29,148 | INFO     | . Timing measurements:
[2025-04-19 09:20:45] 2025-04-19 13:20:29,148 | INFO     | . get job = 0 s
[2025-04-19 09:20:45] 2025-04-19 13:20:29,148 | INFO     | . initial setup = 2 s
[2025-04-19 09:20:45] 2025-04-19 13:20:29,148 | INFO     | . payload setup = 7 s
[2025-04-19 09:20:45] 2025-04-19 13:20:29,149 | INFO     | . stage-in = 0 s
[2025-04-19 09:20:45] 2025-04-19 13:20:29,149 | INFO     | . payload execution = 13526 s
[2025-04-19 09:20:45] 2025-04-19 13:20:29,149 | INFO     | . stage-out = 3 s
[2025-04-19 09:20:45] 2025-04-19 13:20:29,196 | INFO     | . log creation = 0 s
[2025-04-19 09:20:45] 2025-04-19 13:20:29,196 | INFO     | ..............................
[2025-04-19 09:20:45] 2025-04-19 13:20:29,402 | INFO     | 
[2025-04-19 09:20:45] 2025-04-19 13:20:29,402 | INFO     | job summary report
[2025-04-19 09:20:45] 2025-04-19 13:20:29,402 | INFO     | --------------------------------------------------
[2025-04-19 09:20:45] 2025-04-19 13:20:29,402 | INFO     | PanDA job id: 6607432153
[2025-04-19 09:20:45] 2025-04-19 13:20:29,402 | INFO     | task id: 44075483
[2025-04-19 09:20:45] 2025-04-19 13:20:29,402 | INFO     | errors: (none)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,402 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | pilot state: finished 
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | transexitcode: 0
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | exeerrorcode: 0
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | exeerrordiag: 
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | exitcode: 0
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | exitmsg: OK
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | cpuconsumptiontime: 40077 s
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | nevents: 400
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | neventsw: 0
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | pid: 261810
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | pgrp: 261810
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | corecount: 9
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | event service: False
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | sizes: {0: 2426823, 5: 2427029, 11: 2427085, 13537: 2457150, 13538: 2457149, 13541: 2466146, 13544: 2466330, 13558: 2466500}
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | --------------------------------------------------
[2025-04-19 09:20:45] 2025-04-19 13:20:29,403 | INFO     | 
[2025-04-19 09:20:45] 2025-04-19 13:20:29,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 09:20:45] 2025-04-19 13:20:29,555 | INFO     | job 6607432153 has completed (purged errors)
[2025-04-19 09:20:45] 2025-04-19 13:20:29,556 | INFO     | overall cleanup function is called
[2025-04-19 09:20:45] 2025-04-19 13:20:30,564 | INFO     | --- collectZombieJob: --- 10, [261810]
[2025-04-19 09:20:45] 2025-04-19 13:20:30,564 | INFO     | zombie collector waiting for pid 261810
[2025-04-19 09:20:45] 2025-04-19 13:20:30,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 09:20:45] 2025-04-19 13:20:30,564 | INFO     | collected zombie processes
[2025-04-19 09:20:45] 2025-04-19 13:20:30,564 | INFO     | will attempt to kill all subprocesses of pid=261810
[2025-04-19 09:20:45] 2025-04-19 13:20:30,890 | INFO     | process IDs to be killed: [261810] (in reverse order)
[2025-04-19 09:20:45] 2025-04-19 13:20:31,013 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 09:20:45] 2025-04-19 13:20:31,013 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 09:20:45] 2025-04-19 13:20:31,023 | INFO     | did not find any defunct processes belonging to 261810
[2025-04-19 09:20:45] 2025-04-19 13:20:31,042 | INFO     | did not find any defunct processes belonging to 261810
[2025-04-19 09:20:45] 2025-04-19 13:20:31,043 | INFO     | ready for new job
[2025-04-19 09:20:45] 2025-04-19 13:20:31,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 09:20:45] 2025-04-19 13:20:31,045 | INFO     | **************************************
[2025-04-19 09:20:45] 2025-04-19 13:20:31,054 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 09:20:45] 2025-04-19 13:20:31,054 | INFO     | **************************************
[2025-04-19 09:20:45] 2025-04-19 13:20:31,054 | INFO     | 
[2025-04-19 09:20:45] 2025-04-19 13:20:31,057 | INFO     | architecture information:
[2025-04-19 09:20:45] 2025-04-19 13:20:31,058 | INFO     | executing command: cat /etc/os-release
[2025-04-19 09:20:45] 2025-04-19 13:20:31,077 | INFO     | cat /etc/os-release:
[2025-04-19 09:20:45] NAME="CentOS Linux"
[2025-04-19 09:20:45] VERSION="7 (Core)"
[2025-04-19 09:20:45] ID="centos"
[2025-04-19 09:20:45] ID_LIKE="rhel fedora"
[2025-04-19 09:20:45] VERSION_ID="7"
[2025-04-19 09:20:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 09:20:45] ANSI_COLOR="0;31"
[2025-04-19 09:20:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 09:20:45] HOME_URL="https://www.centos.org/"
[2025-04-19 09:20:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 09:20:45] 
[2025-04-19 09:20:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 09:20:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 09:20:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 09:20:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 09:20:45] 
[2025-04-19 09:20:45] 2025-04-19 13:20:31,078 | INFO     | **************************************
[2025-04-19 09:20:45] 2025-04-19 13:20:31,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 09:20:45] 2025-04-19 13:20:31,825 | INFO     | sufficient remaining disk space (56406048768 B)
[2025-04-19 09:20:45] 2025-04-19 13:20:31,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 09:20:45] 2025-04-19 13:20:31,860 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 09:20:45] 2025-04-19 13:20:31,860 | INFO     | update_server=False
[2025-04-19 09:20:45] 2025-04-19 13:20:31,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 09:20:45] 2025-04-19 13:20:32,174 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 09:20:45] 2025-04-19 13:20:32,174 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 09:20:45] 2025-04-19 13:20:32,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:20:45] 2025-04-19 13:20:32,174 | INFO     | will abort loop
[2025-04-19 09:20:45] 2025-04-19 13:20:32,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 09:20:45] 2025-04-19 13:20:32,532 | INFO     | all data control threads have been joined
[2025-04-19 09:20:45] 2025-04-19 13:20:32,701 | INFO     | PID=255065 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 09:20:45] 2025-04-19 13:20:32,702 | INFO     | .. there are 15 such processes running
[2025-04-19 09:20:45] 2025-04-19 13:20:32,702 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 09:20:45] 2025-04-19 13:20:32,702 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 09:20:45] 2025-04-19 13:20:32,702 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 09:20:45] 2025-04-19 13:20:32,747 | INFO     | all payload control threads have been joined
[2025-04-19 09:20:45] 2025-04-19 13:20:32,866 | INFO     | [job] retrieve thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:32,903 | INFO     | [job] validate thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:33,051 | INFO     | all job control threads have been joined
[2025-04-19 09:20:45] 2025-04-19 13:20:33,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:33,180 | INFO     | [job] job monitor thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:33,250 | INFO     | [payload] failed_post thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:33,426 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:33,543 | INFO     | [data] control thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:33,578 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:33,648 | INFO     | [payload] validate_post thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:33,753 | INFO     | [payload] control thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:34,057 | INFO     | [job] control thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:34,203 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:34,204 | INFO     | [data] copytool_out thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:34,208 | INFO     | [data] copytool_in thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:34,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 09:20:45] 2025-04-19 13:20:34,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 09:20:45] 2025-04-19 13:20:35,424 | INFO     | [job] queue monitor thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:38,335 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 09:20:45] 2025-04-19 13:20:39,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139812310632256)>', '<ExcThread(monitor, started 139811654465280)>']
[2025-04-19 09:20:45] 2025-04-19 13:20:39,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 09:20:45] 2025-04-19 13:20:39,742 | INFO     | [monitor] control thread has ended
[2025-04-19 09:20:45] 2025-04-19 13:20:44,098 | INFO     | all workflow threads have been joined
[2025-04-19 09:20:45] 2025-04-19 13:20:44,098 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 09:20:45] 2025-04-19 13:20:44,098 | INFO     | traces error code: 0
[2025-04-19 09:20:45] 2025-04-19 13:20:44,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 09:20:45] 2025-04-19 13:20:44,676 [wrapper] ==== pilot stdout END ====
[2025-04-19 09:20:45] 2025-04-19 13:20:44,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 09:20:45] 2025-04-19 13:20:44,682 [wrapper] pilotpid: 255065
[2025-04-19 09:20:45] 2025-04-19 13:20:44,685 [wrapper] Pilot exit status: 0
[2025-04-19 09:20:45] 2025-04-19 13:20:44,810 [wrapper] pandaids: 6607432153
[2025-04-19 09:20:45] 2025-04-19 13:20:44,894 [wrapper] cleanup supervisor_pilot  80685 255066
[2025-04-19 09:20:45] 2025-04-19 13:20:44,897 [wrapper] Test setup, not cleaning
[2025-04-19 09:20:45] 2025-04-19 13:20:44,900 [wrapper] apfmon messages muted
[2025-04-19 09:20:45] 2025-04-19 13:20:44,903 [wrapper] ==== wrapper stdout END ====
[2025-04-19 09:20:45] 2025-04-19 13:20:44,950 [wrapper] ==== wrapper stderr END ====
[2025-04-19 09:20:45]  *** Error codes and diagnostics ***
[2025-04-19 09:20:45]     "exeErrorCode": 0,
[2025-04-19 09:20:45]     "exeErrorDiag": "",
[2025-04-19 09:20:45]     "pilotErrorCode": 0,
[2025-04-19 09:20:45]     "pilotErrorDiag": "",
[2025-04-19 09:20:45]  *** Listing of results directory ***
[2025-04-19 09:20:45] total 416240
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 02:32 pilot3.tar.gz
[2025-04-19 09:20:45] -rwx------ 1 boincer umatlas     37140 Apr 19 02:38 runpilot2-wrapper.sh
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 02:38 queuedata.json
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas       100 Apr 19 05:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 09:20:45] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 05:33 run_atlas
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas       105 Apr 19 05:33 job.xml
[2025-04-19 09:20:45] -rw-r--r-- 2 boincer umatlas 222815601 Apr 19 05:33 EVNT.44075481._003066.pool.root.1
[2025-04-19 09:20:45] drwxrwx--x 2 boincer umatlas      4096 Apr 19 05:33 shared
[2025-04-19 09:20:45] -rw-r--r-- 2 boincer umatlas    508882 Apr 19 05:33 input.tar.gz
[2025-04-19 09:20:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 05:33 start_atlas.sh
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas         0 Apr 19 05:33 boinc_lockfile
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 05:34 pandaJob.out
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas       424 Apr 19 05:34 setup.sh.local
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas    991300 Apr 19 05:34 agis_schedconf.cvmfs.json
[2025-04-19 09:20:45] drwx------ 4 boincer umatlas      4096 Apr 19 05:34 pilot3
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas 196348459 Apr 19 09:19 HITS.44075483._079023.pool.root.1
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas       530 Apr 19 09:19 boinc_task_state.xml
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas      1059 Apr 19 09:20 memory_monitor_summary.json
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas   1618536 Apr 19 09:20 agis_ddmendpoints.agis.ALL.json
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas    407855 Apr 19 09:20 log.44075483._079023.job.log.tgz.1
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas        95 Apr 19 09:20 pilot_heartbeat.json
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas      7749 Apr 19 09:20 heartbeat.json
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas      6268 Apr 19 09:20 init_data.xml
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 09:20 boinc_mmap_file
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas        28 Apr 19 09:20 wrapper_checkpoint.txt
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas      4933 Apr 19 09:20 pilotlog.txt
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas   1193674 Apr 19 09:20 log.44075483._079023.job.log.1
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas       357 Apr 19 09:20 output.list
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas       620 Apr 19 09:20 runtime_log
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas   1617920 Apr 19 09:20 result.tar.gz
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas       663 Apr 19 09:20 uZELDms1GQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmoDhLDmNPDmUm.diag
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas     11024 Apr 19 09:20 runtime_log.err
[2025-04-19 09:20:45] -rw-r--r-- 1 boincer umatlas     20984 Apr 19 09:20 stderr.txt
[2025-04-19 09:20:45] HITS file was successfully produced:
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas 196348459 Apr 19 09:19 shared/HITS.pool.root.1
[2025-04-19 09:20:45]  *** Contents of shared directory: ***
[2025-04-19 09:20:45] total 411448
[2025-04-19 09:20:45] -rw-r--r-- 2 boincer umatlas 222815601 Apr 19 05:33 ATLAS.root_0
[2025-04-19 09:20:45] -rw-r--r-- 2 boincer umatlas    508882 Apr 19 05:33 input.tar.gz
[2025-04-19 09:20:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 05:33 start_atlas.sh
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas 196348459 Apr 19 09:19 HITS.pool.root.1
[2025-04-19 09:20:45] -rw------- 1 boincer umatlas   1617920 Apr 19 09:20 result.tar.gz
09:20:47 (244718): run_atlas exited; CPU time 40348.734781
09:20:47 (244718): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN