Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:24:46 (4141557): wrapper (7.7.26015): starting
05:24:46 (4141557): wrapper: running run_atlas (--nthreads 10)
[2025-04-19 05:24:46] Arguments: --nthreads 10
[2025-04-19 05:24:46] Threads: 10
[2025-04-19 05:24:46] Checking for CVMFS
[2025-04-19 05:24:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 05:24:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 05:24:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 05:24:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 05:24:48] 2.12.6.0 1587938 175383 222776 145033 4 106 29649370 32935936 15366 130560 0 86641617 99.585 106462920 25454 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 05:24:48] CVMFS is ok
[2025-04-19 05:24:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 05:24:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 05:24:48] Further information can be found at the LHC@home message board.
[2025-04-19 05:24:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 05:24:48] Checking for apptainer binary...
[2025-04-19 05:24:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 05:24:48] Running /usr/bin/apptainer --version
[2025-04-19 05:24:48] apptainer version 1.4.0-1.el9
[2025-04-19 05:24:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 05:24:49] c-4-39.aglt2.org
[2025-04-19 05:24:49] apptainer works
[2025-04-19 05:24:49] Set ATHENA_PROC_NUMBER=10
[2025-04-19 05:24:49] Set ATHENA_CORE_NUMBER=10
[2025-04-19 05:24:49] Starting ATLAS job with PandaID=6607432139
[2025-04-19 05:24:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 12:31:45]  *** The last 200 lines of the pilot log: ***
[2025-04-19 12:31:45] 2025-04-19 16:31:23,130 | INFO     | mean x: 1745067601.2024097
[2025-04-19 12:31:45] 2025-04-19 16:31:23,130 | INFO     | mean y: 2338816.1879518074
[2025-04-19 12:31:45] 2025-04-19 16:31:23,130 | INFO     | -- intersect: -16617244838.919024
[2025-04-19 12:31:45] 2025-04-19 16:31:23,136 | INFO     | intersect: -16617244838.919024
[2025-04-19 12:31:45] 2025-04-19 16:31:23,136 | INFO     | chi2: 5.9444248303989715
[2025-04-19 12:31:45] 2025-04-19 16:31:23,137 | INFO     | sum of square deviations: 21372553286.743973
[2025-04-19 12:31:45] 2025-04-19 16:31:23,149 | INFO     | sum of deviations: 234719736774.5001
[2025-04-19 12:31:45] 2025-04-19 16:31:23,149 | INFO     | mean x: 1745067448.7195122
[2025-04-19 12:31:45] 2025-04-19 16:31:23,149 | INFO     | mean y: 2343322.9
[2025-04-19 12:31:45] 2025-04-19 16:31:23,149 | INFO     | -- intersect: -19162506413.197845
[2025-04-19 12:31:45] 2025-04-19 16:31:23,150 | INFO     | intersect: -19162506413.197845
[2025-04-19 12:31:45] 2025-04-19 16:31:23,150 | INFO     | chi2: 5.257374528862514
[2025-04-19 12:31:45] 2025-04-19 16:31:23,150 | INFO     | current chi2=5.257374528862514 (change=11.557893675818331 %)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,153 | INFO     | right removable region: 409
[2025-04-19 12:31:45] 2025-04-19 16:31:23,153 | INFO     | sum of square deviations: 21371969792.595196
[2025-04-19 12:31:45] 2025-04-19 16:31:23,193 | INFO     | sum of deviations: 102524955374.1074
[2025-04-19 12:31:45] 2025-04-19 16:31:23,193 | INFO     | mean x: 1745067753.7414634
[2025-04-19 12:31:45] 2025-04-19 16:31:23,193 | INFO     | mean y: 2359695.387804878
[2025-04-19 12:31:45] 2025-04-19 16:31:23,194 | INFO     | -- intersect: -8369025596.347254
[2025-04-19 12:31:45] 2025-04-19 16:31:23,194 | INFO     | intersect: -8369025596.347254
[2025-04-19 12:31:45] 2025-04-19 16:31:23,194 | INFO     | chi2: 2.9707197020722735
[2025-04-19 12:31:45] 2025-04-19 16:31:23,195 | INFO     | current chi2=2.9707197020722735 (change=50.02511114480881 %)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,195 | INFO     | sum of square deviations: 20599212137.471527
[2025-04-19 12:31:45] 2025-04-19 16:31:23,263 | INFO     | sum of deviations: 35407185306.02961
[2025-04-19 12:31:45] 2025-04-19 16:31:23,264 | INFO     | mean x: 1745067906.2790124
[2025-04-19 12:31:45] 2025-04-19 16:31:23,264 | INFO     | mean y: 2372938.274074074
[2025-04-19 12:31:45] 2025-04-19 16:31:23,264 | INFO     | -- intersect: -2997156476.5829706
[2025-04-19 12:31:45] 2025-04-19 16:31:23,264 | INFO     | intersect: -2997156476.5829706
[2025-04-19 12:31:45] 2025-04-19 16:31:23,265 | INFO     | chi2: 1.9152537671334011
[2025-04-19 12:31:45] 2025-04-19 16:31:23,265 | INFO     | current chi2=1.9152537671334011 (change=35.5289640487662 %)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,266 | INFO     | sum of square deviations: 19845291799.677486
[2025-04-19 12:31:45] 2025-04-19 16:31:23,271 | INFO     | sum of deviations: -26654463419.747498
[2025-04-19 12:31:45] 2025-04-19 16:31:23,272 | INFO     | mean x: 1745068058.8175
[2025-04-19 12:31:45] 2025-04-19 16:31:23,272 | INFO     | mean y: 2385495.5925
[2025-04-19 12:31:45] 2025-04-19 16:31:23,272 | INFO     | -- intersect: 2346208564.9754734
[2025-04-19 12:31:45] 2025-04-19 16:31:23,272 | INFO     | intersect: 2346208564.9754734
[2025-04-19 12:31:45] 2025-04-19 16:31:23,273 | INFO     | chi2: 1.0016401628632416
[2025-04-19 12:31:45] 2025-04-19 16:31:23,273 | INFO     | current chi2=1.0016401628632416 (change=47.70196095933456 %)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,288 | INFO     | sum of square deviations: 19110073957.483547
[2025-04-19 12:31:45] 2025-04-19 16:31:23,311 | INFO     | sum of deviations: -47987124393.17721
[2025-04-19 12:31:45] 2025-04-19 16:31:23,311 | INFO     | mean x: 1745068211.3468354
[2025-04-19 12:31:45] 2025-04-19 16:31:23,332 | INFO     | mean y: 2389915.658227848
[2025-04-19 12:31:45] 2025-04-19 16:31:23,332 | INFO     | -- intersect: 4384414052.183704
[2025-04-19 12:31:45] 2025-04-19 16:31:23,332 | INFO     | intersect: 4384414052.183704
[2025-04-19 12:31:45] 2025-04-19 16:31:23,333 | INFO     | chi2: 0.8795974596365341
[2025-04-19 12:31:45] 2025-04-19 16:31:23,333 | INFO     | current chi2=0.8795974596365341 (change=12.184286109079528 %)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,333 | INFO     | left removable region: 40
[2025-04-19 12:31:45] 2025-04-19 16:31:23,334 | INFO     | sum of square deviations: 15578904358.997355
[2025-04-19 12:31:45] 2025-04-19 16:31:23,355 | INFO     | sum of deviations: -3459950451.853652
[2025-04-19 12:31:45] 2025-04-19 16:31:23,356 | INFO     | mean x: 1745068638.4417343
[2025-04-19 12:31:45] 2025-04-19 16:31:23,356 | INFO     | mean y: 2390726.1463414636
[2025-04-19 12:31:45] 2025-04-19 16:31:23,356 | INFO     | -- intersect: 389956557.79643744
[2025-04-19 12:31:45] 2025-04-19 16:31:23,356 | INFO     | intersect: 389956557.79643744
[2025-04-19 12:31:45] 2025-04-19 16:31:23,357 | INFO     | chi2: 0.054197217179538994
[2025-04-19 12:31:45] 2025-04-19 16:31:23,357 | INFO     | -- intersect: 389956557.79643744
[2025-04-19 12:31:45] 2025-04-19 16:31:23,357 | INFO     | current memory leak: -0.22 B/s (using 369 data points, chi2=0.05)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,380 | INFO     | ..............................
[2025-04-19 12:31:45] 2025-04-19 16:31:23,380 | INFO     | . Timing measurements:
[2025-04-19 12:31:45] 2025-04-19 16:31:23,380 | INFO     | . get job = 0 s
[2025-04-19 12:31:45] 2025-04-19 16:31:23,380 | INFO     | . initial setup = 4 s
[2025-04-19 12:31:45] 2025-04-19 16:31:23,381 | INFO     | . payload setup = 59 s
[2025-04-19 12:31:45] 2025-04-19 16:31:23,381 | INFO     | . stage-in = 0 s
[2025-04-19 12:31:45] 2025-04-19 16:31:23,381 | INFO     | . payload execution = 25332 s
[2025-04-19 12:31:45] 2025-04-19 16:31:23,415 | INFO     | . stage-out = 4 s
[2025-04-19 12:31:45] 2025-04-19 16:31:23,415 | INFO     | . log creation = 0 s
[2025-04-19 12:31:45] 2025-04-19 16:31:23,415 | INFO     | ..............................
[2025-04-19 12:31:45] 2025-04-19 16:31:23,689 | INFO     | 
[2025-04-19 12:31:45] 2025-04-19 16:31:23,689 | INFO     | job summary report
[2025-04-19 12:31:45] 2025-04-19 16:31:23,689 | INFO     | --------------------------------------------------
[2025-04-19 12:31:45] 2025-04-19 16:31:23,689 | INFO     | PanDA job id: 6607432139
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | task id: 44075483
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | errors: (none)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | pilot state: finished 
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | transexitcode: 0
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | exeerrorcode: 0
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | exeerrordiag: 
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | exitcode: 0
[2025-04-19 12:31:45] 2025-04-19 16:31:23,690 | INFO     | exitmsg: OK
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | cpuconsumptiontime: 50194 s
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | nevents: 400
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | neventsw: 0
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | pid: 4157900
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | pgrp: 4157900
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | corecount: 10
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | event service: False
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | sizes: {0: 2425995, 1: 2426680, 2: 2426680, 3: 2426907, 4: 2426935, 15: 2426935, 26: 2427091, 37: 2427119, 43: 2427353, 50: 2427381, 25395: 2461985, 25396: 2462264
[2025-04-19 12:31:45] 2025-04-19 16:31:23,691 | INFO     | --------------------------------------------------
[2025-04-19 12:31:45] 2025-04-19 16:31:23,692 | INFO     | 
[2025-04-19 12:31:45] 2025-04-19 16:31:23,692 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 12:31:45] 2025-04-19 16:31:23,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,808 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,808 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,808 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 12:31:45] 2025-04-19 16:31:23,810 | INFO     | job 6607432139 has completed (purged errors)
[2025-04-19 12:31:45] 2025-04-19 16:31:23,811 | INFO     | overall cleanup function is called
[2025-04-19 12:31:45] 2025-04-19 16:31:24,819 | INFO     | --- collectZombieJob: --- 10, [4157900]
[2025-04-19 12:31:45] 2025-04-19 16:31:24,820 | INFO     | zombie collector waiting for pid 4157900
[2025-04-19 12:31:45] 2025-04-19 16:31:24,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 12:31:45] 2025-04-19 16:31:24,820 | INFO     | collected zombie processes
[2025-04-19 12:31:45] 2025-04-19 16:31:24,820 | INFO     | will attempt to kill all subprocesses of pid=4157900
[2025-04-19 12:31:45] 2025-04-19 16:31:28,643 | INFO     | process IDs to be killed: [4157900] (in reverse order)
[2025-04-19 12:31:45] 2025-04-19 16:31:28,894 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 12:31:45] 2025-04-19 16:31:28,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 12:31:45] 2025-04-19 16:31:28,924 | INFO     | did not find any defunct processes belonging to 4157900
[2025-04-19 12:31:45] 2025-04-19 16:31:29,008 | INFO     | did not find any defunct processes belonging to 4157900
[2025-04-19 12:31:45] 2025-04-19 16:31:29,008 | INFO     | ready for new job
[2025-04-19 12:31:45] 2025-04-19 16:31:29,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 12:31:45] 2025-04-19 16:31:29,014 | INFO     | **************************************
[2025-04-19 12:31:45] 2025-04-19 16:31:29,015 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 12:31:45] 2025-04-19 16:31:29,015 | INFO     | **************************************
[2025-04-19 12:31:45] 2025-04-19 16:31:29,015 | INFO     | 
[2025-04-19 12:31:45] 2025-04-19 16:31:29,034 | INFO     | architecture information:
[2025-04-19 12:31:45] 2025-04-19 16:31:29,057 | INFO     | executing command: cat /etc/os-release
[2025-04-19 12:31:45] 2025-04-19 16:31:29,230 | INFO     | cat /etc/os-release:
[2025-04-19 12:31:45] NAME="CentOS Linux"
[2025-04-19 12:31:45] VERSION="7 (Core)"
[2025-04-19 12:31:45] ID="centos"
[2025-04-19 12:31:45] ID_LIKE="rhel fedora"
[2025-04-19 12:31:45] VERSION_ID="7"
[2025-04-19 12:31:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 12:31:45] ANSI_COLOR="0;31"
[2025-04-19 12:31:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 12:31:45] HOME_URL="https://www.centos.org/"
[2025-04-19 12:31:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 12:31:45] 
[2025-04-19 12:31:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 12:31:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 12:31:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 12:31:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 12:31:45] 
[2025-04-19 12:31:45] 2025-04-19 16:31:29,231 | INFO     | **************************************
[2025-04-19 12:31:45] 2025-04-19 16:31:29,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 12:31:45] 2025-04-19 16:31:29,960 | INFO     | sufficient remaining disk space (75817287680 B)
[2025-04-19 12:31:45] 2025-04-19 16:31:29,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 12:31:45] 2025-04-19 16:31:29,961 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 12:31:45] 2025-04-19 16:31:29,961 | INFO     | update_server=False
[2025-04-19 12:31:45] 2025-04-19 16:31:29,961 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 12:31:45] 2025-04-19 16:31:30,178 | INFO     | PID=4147451 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 12:31:45] 2025-04-19 16:31:30,178 | INFO     | .. there are 39 such processes running
[2025-04-19 12:31:45] 2025-04-19 16:31:30,179 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 12:31:45] 2025-04-19 16:31:30,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 12:31:45] 2025-04-19 16:31:30,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 12:31:45] 2025-04-19 16:31:30,222 | INFO     | all payload control threads have been joined
[2025-04-19 12:31:45] 2025-04-19 16:31:30,223 | INFO     | all data control threads have been joined
[2025-04-19 12:31:45] 2025-04-19 16:31:30,403 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 12:31:45] 2025-04-19 16:31:30,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:31:45] 2025-04-19 16:31:30,430 | INFO     | aborting loop
[2025-04-19 12:31:45] 2025-04-19 16:31:30,967 | INFO     | [job] retrieve thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:31,163 | INFO     | [payload] failed_post thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:31,229 | INFO     | [payload] control thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:31,241 | INFO     | [data] control thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:31,262 | INFO     | all job control threads have been joined
[2025-04-19 12:31:45] 2025-04-19 16:31:31,407 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:31,436 | INFO     | [job] job monitor thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:31,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 12:31:45] 2025-04-19 16:31:31,770 | INFO     | [job] validate thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:31,793 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:32,152 | INFO     | [payload] validate_post thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:32,191 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:32,241 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:32,269 | INFO     | [job] control thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:32,396 | INFO     | [data] copytool_in thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:32,411 | INFO     | [data] copytool_out thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:32,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 12:31:45] 2025-04-19 16:31:33,919 | INFO     | [job] queue monitor thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:35,571 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 12:31:45] 2025-04-19 16:31:37,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623624005440)>', '<ExcThread(monitor, started 139623095310080)>']
[2025-04-19 12:31:45] 2025-04-19 16:31:37,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 12:31:45] 2025-04-19 16:31:37,229 | INFO     | [monitor] control thread has ended
[2025-04-19 12:31:45] 2025-04-19 16:31:42,052 | INFO     | all workflow threads have been joined
[2025-04-19 12:31:45] 2025-04-19 16:31:42,052 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 12:31:45] 2025-04-19 16:31:42,052 | INFO     | traces error code: 0
[2025-04-19 12:31:45] 2025-04-19 16:31:42,053 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 12:31:45] 2025-04-19 16:31:42,718 [wrapper] ==== pilot stdout END ====
[2025-04-19 12:31:45] 2025-04-19 16:31:42,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 12:31:45] 2025-04-19 16:31:42,805 [wrapper] pilotpid: 4147451
[2025-04-19 12:31:45] 2025-04-19 16:31:42,876 [wrapper] Pilot exit status: 0
[2025-04-19 12:31:45] 2025-04-19 16:31:43,102 [wrapper] pandaids: 6607432139
[2025-04-19 12:31:45] 2025-04-19 16:31:44,491 [wrapper] cleanup supervisor_pilot 2245044 4147452
[2025-04-19 12:31:45] 2025-04-19 16:31:44,542 [wrapper] Test setup, not cleaning
[2025-04-19 12:31:45] 2025-04-19 16:31:44,616 [wrapper] apfmon messages muted
[2025-04-19 12:31:45] 2025-04-19 16:31:44,687 [wrapper] ==== wrapper stdout END ====
[2025-04-19 12:31:45] 2025-04-19 16:31:44,794 [wrapper] ==== wrapper stderr END ====
[2025-04-19 12:31:45]  *** Error codes and diagnostics ***
[2025-04-19 12:31:45]     "exeErrorCode": 0,
[2025-04-19 12:31:45]     "exeErrorDiag": "",
[2025-04-19 12:31:45]     "pilotErrorCode": 0,
[2025-04-19 12:31:45]     "pilotErrorDiag": "",
[2025-04-19 12:31:45]  *** Listing of results directory ***
[2025-04-19 12:31:45] total 422056
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 02:32 pilot3.tar.gz
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 02:36 queuedata.json
[2025-04-19 12:31:45] -rwx------. 1 boincer umatlas     37140 Apr 19 02:37 runpilot2-wrapper.sh
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas       100 Apr 19 05:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 12:31:45] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 05:24 run_atlas
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas       105 Apr 19 05:24 job.xml
[2025-04-19 12:31:45] -rw-r--r--. 2 boincer umatlas 225405329 Apr 19 05:24 EVNT.44075481._003065.pool.root.1
[2025-04-19 12:31:45] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 05:24 start_atlas.sh
[2025-04-19 12:31:45] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 05:24 shared
[2025-04-19 12:31:45] -rw-r--r--. 2 boincer umatlas    508890 Apr 19 05:24 input.tar.gz
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas         0 Apr 19 05:24 boinc_lockfile
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas      2578 Apr 19 05:24 pandaJob.out
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas       467 Apr 19 05:24 setup.sh.local
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas    991300 Apr 19 05:25 agis_schedconf.cvmfs.json
[2025-04-19 12:31:45] drwx------. 4 boincer umatlas      4096 Apr 19 05:25 pilot3
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas      6674 Apr 19 12:28 init_data.xml
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas 198256877 Apr 19 12:29 HITS.44075483._079009.pool.root.1
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas       531 Apr 19 12:29 boinc_task_state.xml
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas        95 Apr 19 12:30 pilot_heartbeat.json
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas      1050 Apr 19 12:30 memory_monitor_summary.json
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas   1618536 Apr 19 12:30 agis_ddmendpoints.agis.ALL.json
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas    521241 Apr 19 12:30 log.44075483._079009.job.log.tgz.1
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas      7733 Apr 19 12:31 heartbeat.json
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 12:31 boinc_mmap_file
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas        28 Apr 19 12:31 wrapper_checkpoint.txt
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas      4748 Apr 19 12:31 pilotlog.txt
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas   1809316 Apr 19 12:31 log.44075483._079009.job.log.1
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas       357 Apr 19 12:31 output.list
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas       620 Apr 19 12:31 runtime_log
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas   2344960 Apr 19 12:31 result.tar.gz
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas     11411 Apr 19 12:31 runtime_log.err
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas       660 Apr 19 12:31 5DZMDmt0GQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbDhLDmjiSitn.diag
[2025-04-19 12:31:45] -rw-r--r--. 1 boincer umatlas     20970 Apr 19 12:31 stderr.txt
[2025-04-19 12:31:45] HITS file was successfully produced:
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas 198256877 Apr 19 12:29 shared/HITS.pool.root.1
[2025-04-19 12:31:45]  *** Contents of shared directory: ***
[2025-04-19 12:31:45] total 416552
[2025-04-19 12:31:45] -rw-r--r--. 2 boincer umatlas 225405329 Apr 19 05:24 ATLAS.root_0
[2025-04-19 12:31:45] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 05:24 start_atlas.sh
[2025-04-19 12:31:45] -rw-r--r--. 2 boincer umatlas    508890 Apr 19 05:24 input.tar.gz
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas 198256877 Apr 19 12:29 HITS.pool.root.1
[2025-04-19 12:31:45] -rw-------. 1 boincer umatlas   2344960 Apr 19 12:31 result.tar.gz
12:32:07 (4141557): run_atlas exited; CPU time 51110.518066
12:32:07 (4141557): called boinc_finish(0)

</stderr_txt>
]]>

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