Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:45:31 (51368): wrapper (7.7.26015): starting
05:45:31 (51368): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 05:45:31] Arguments: --nthreads 8
[2025-04-19 05:45:31] Threads: 8
[2025-04-19 05:45:31] Checking for CVMFS
[2025-04-19 05:45:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 05:45:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 05:45:33] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 05:45:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 05:45:34] 2.11.2.0 40688 2390 173856 145033 3 603 17745677 18432001 37706 130560 0 31961700 98.937 72817346 53001 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 05:45:34] CVMFS is ok
[2025-04-19 05:45:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 05:45:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 05:45:34] Further information can be found at the LHC@home message board.
[2025-04-19 05:45:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 05:45:34] Checking for apptainer binary...
[2025-04-19 05:45:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 05:45:34] Running /usr/bin/apptainer --version
[2025-04-19 05:45:34] apptainer version 1.3.2-1.el7
[2025-04-19 05:45:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 05:45:52] c-212-18.aglt2.org
[2025-04-19 05:45:52] apptainer works
[2025-04-19 05:45:52] Set ATHENA_PROC_NUMBER=8
[2025-04-19 05:45:52] Set ATHENA_CORE_NUMBER=8
[2025-04-19 05:45:52] Starting ATLAS job with PandaID=6607430960
[2025-04-19 05:45:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 17:05:44]  *** The last 200 lines of the pilot log: ***
[2025-04-19 17:05:44] 2025-04-19 21:05:18,681 | INFO     | -- intersect: -15241639007.662865
[2025-04-19 17:05:44] 2025-04-19 21:05:18,681 | INFO     | intersect: -15241639007.662865
[2025-04-19 17:05:44] 2025-04-19 21:05:18,682 | INFO     | chi2: 10.44051058379684
[2025-04-19 17:05:44] 2025-04-19 21:05:18,682 | INFO     | current chi2=10.44051058379684 (change=12.584996877349456 %)
[2025-04-19 17:05:44] 2025-04-19 21:05:18,682 | INFO     | right removable region: 655
[2025-04-19 17:05:44] 2025-04-19 21:05:18,682 | INFO     | sum of square deviations: 87536695986.02426
[2025-04-19 17:05:44] 2025-04-19 21:05:18,712 | INFO     | sum of deviations: 457555906520.067
[2025-04-19 17:05:44] 2025-04-19 21:05:18,713 | INFO     | mean x: 1745076649.945122
[2025-04-19 17:05:44] 2025-04-19 21:05:18,713 | INFO     | mean y: 2436496.724085366
[2025-04-19 17:05:44] 2025-04-19 21:05:18,713 | INFO     | -- intersect: -9119110981.37724
[2025-04-19 17:05:44] 2025-04-19 21:05:18,713 | INFO     | intersect: -9119110981.37724
[2025-04-19 17:05:44] 2025-04-19 21:05:18,714 | INFO     | chi2: 7.343836911790023
[2025-04-19 17:05:44] 2025-04-19 21:05:18,714 | INFO     | current chi2=7.343836911790023 (change=38.51243946127942 %)
[2025-04-19 17:05:44] 2025-04-19 21:05:18,714 | INFO     | sum of square deviations: 85550225495.02573
[2025-04-19 17:05:44] 2025-04-19 21:05:18,745 | INFO     | sum of deviations: 287452384907.3827
[2025-04-19 17:05:44] 2025-04-19 21:05:18,746 | INFO     | mean x: 1745076802.4485407
[2025-04-19 17:05:44] 2025-04-19 21:05:18,748 | INFO     | mean y: 2449551.9815668203
[2025-04-19 17:05:44] 2025-04-19 21:05:18,748 | INFO     | -- intersect: -5861082493.758621
[2025-04-19 17:05:44] 2025-04-19 21:05:18,748 | INFO     | intersect: -5861082493.758621
[2025-04-19 17:05:44] 2025-04-19 21:05:18,749 | INFO     | chi2: 4.825162593029072
[2025-04-19 17:05:44] 2025-04-19 21:05:18,749 | INFO     | current chi2=4.825162593029072 (change=34.29643589602859 %)
[2025-04-19 17:05:44] 2025-04-19 21:05:18,750 | INFO     | sum of square deviations: 83594034641.51242
[2025-04-19 17:05:44] 2025-04-19 21:05:18,782 | INFO     | sum of deviations: 143531364889.19485
[2025-04-19 17:05:44] 2025-04-19 21:05:18,783 | INFO     | mean x: 1745076954.9520123
[2025-04-19 17:05:44] 2025-04-19 21:05:18,783 | INFO     | mean y: 2460772.6191950464
[2025-04-19 17:05:44] 2025-04-19 21:05:18,783 | INFO     | -- intersect: -2993844863.962179
[2025-04-19 17:05:44] 2025-04-19 21:05:18,783 | INFO     | intersect: -2993844863.962179
[2025-04-19 17:05:44] 2025-04-19 21:05:18,783 | INFO     | chi2: 3.0674838947882104
[2025-04-19 17:05:44] 2025-04-19 21:05:18,783 | INFO     | current chi2=3.0674838947882104 (change=36.42734652673022 %)
[2025-04-19 17:05:44] 2025-04-19 21:05:18,784 | INFO     | sum of square deviations: 81667890862.98296
[2025-04-19 17:05:44] 2025-04-19 21:05:18,811 | INFO     | sum of deviations: 26485354245.310318
[2025-04-19 17:05:44] 2025-04-19 21:05:18,811 | INFO     | mean x: 1745077107.4555383
[2025-04-19 17:05:44] 2025-04-19 21:05:18,812 | INFO     | mean y: 2470029.9407176287
[2025-04-19 17:05:44] 2025-04-19 21:05:18,812 | INFO     | -- intersect: -563468246.2648548
[2025-04-19 17:05:44] 2025-04-19 21:05:18,812 | INFO     | intersect: -563468246.2648548
[2025-04-19 17:05:44] 2025-04-19 21:05:18,812 | INFO     | chi2: 1.8251606306656951
[2025-04-19 17:05:44] 2025-04-19 21:05:18,812 | INFO     | current chi2=1.8251606306656951 (change=40.499748547442316 %)
[2025-04-19 17:05:44] 2025-04-19 21:05:18,823 | INFO     | sum of square deviations: 79771561596.93703
[2025-04-19 17:05:44] 2025-04-19 21:05:18,847 | INFO     | sum of deviations: -21673472477.80504
[2025-04-19 17:05:44] 2025-04-19 21:05:18,847 | INFO     | mean x: 1745077259.9591196
[2025-04-19 17:05:44] 2025-04-19 21:05:18,847 | INFO     | mean y: 2473898.7767295595
[2025-04-19 17:05:44] 2025-04-19 21:05:18,847 | INFO     | -- intersect: 476601309.7013221
[2025-04-19 17:05:44] 2025-04-19 21:05:18,847 | INFO     | intersect: 476601309.7013221
[2025-04-19 17:05:44] 2025-04-19 21:05:18,850 | INFO     | chi2: 1.6209128934196275
[2025-04-19 17:05:44] 2025-04-19 21:05:18,850 | INFO     | current chi2=1.6209128934196275 (change=11.19067186823835 %)
[2025-04-19 17:05:44] 2025-04-19 21:05:18,851 | INFO     | left removable region: 50
[2025-04-19 17:05:44] 2025-04-19 21:05:18,851 | INFO     | sum of square deviations: 68665994978.85294
[2025-04-19 17:05:44] 2025-04-19 21:05:18,881 | INFO     | sum of deviations: 31129169136.059532
[2025-04-19 17:05:44] 2025-04-19 21:05:18,881 | INFO     | mean x: 1745077839.4743803
[2025-04-19 17:05:44] 2025-04-19 21:05:18,881 | INFO     | mean y: 2483306.3586776857
[2025-04-19 17:05:44] 2025-04-19 21:05:18,881 | INFO     | -- intersect: -788633508.2642971
[2025-04-19 17:05:44] 2025-04-19 21:05:18,881 | INFO     | intersect: -788633508.2642971
[2025-04-19 17:05:44] 2025-04-19 21:05:18,885 | INFO     | chi2: 0.0005036680902021418
[2025-04-19 17:05:44] 2025-04-19 21:05:18,885 | INFO     | -- intersect: -788633508.2642971
[2025-04-19 17:05:44] 2025-04-19 21:05:18,885 | INFO     | current memory leak: 0.45 B/s (using 605 data points, chi2=0.00)
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | ..............................
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | . Timing measurements:
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | . get job = 0 s
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | . initial setup = 6 s
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | . payload setup = 90 s
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | . stage-in = 0 s
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | . payload execution = 40338 s
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | . stage-out = 7 s
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | . log creation = 1 s
[2025-04-19 17:05:44] 2025-04-19 21:05:18,887 | INFO     | ..............................
[2025-04-19 17:05:44] 2025-04-19 21:05:19,765 | INFO     | 
[2025-04-19 17:05:44] 2025-04-19 21:05:19,765 | INFO     | job summary report
[2025-04-19 17:05:44] 2025-04-19 21:05:19,765 | INFO     | --------------------------------------------------
[2025-04-19 17:05:44] 2025-04-19 21:05:19,765 | INFO     | PanDA job id: 6607430960
[2025-04-19 17:05:44] 2025-04-19 21:05:19,765 | INFO     | task id: 44075483
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | errors: (none)
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | pilot state: finished 
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | transexitcode: 0
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | exeerrorcode: 0
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | exeerrordiag: 
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | exitcode: 0
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | exitmsg: OK
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | cpuconsumptiontime: 38185 s
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | nevents: 400
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | neventsw: 0
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | pid: 79057
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | pgrp: 79057
[2025-04-19 17:05:44] 2025-04-19 21:05:19,766 | INFO     | corecount: 8
[2025-04-19 17:05:44] 2025-04-19 21:05:19,767 | INFO     | event service: False
[2025-04-19 17:05:44] 2025-04-19 21:05:19,767 | INFO     | sizes: {0: 2425995, 1: 2426851, 2: 2426879, 12: 2426879, 24: 2426907, 34: 2426935, 45: 2427091, 56: 2427119, 61: 2427353, 67: 2427381, 40434: 2466985, 40435: 24672
[2025-04-19 17:05:44] 2025-04-19 21:05:19,767 | INFO     | --------------------------------------------------
[2025-04-19 17:05:44] 2025-04-19 21:05:19,767 | INFO     | 
[2025-04-19 17:05:44] 2025-04-19 21:05:19,767 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-19 17:05:44] 2025-04-19 21:05:20,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,095 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,096 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 17:05:44] 2025-04-19 21:05:20,097 | INFO     | job 6607430960 has completed (purged errors)
[2025-04-19 17:05:44] 2025-04-19 21:05:20,097 | INFO     | overall cleanup function is called
[2025-04-19 17:05:44] 2025-04-19 21:05:21,124 | INFO     | --- collectZombieJob: --- 10, [79057]
[2025-04-19 17:05:44] 2025-04-19 21:05:21,124 | INFO     | zombie collector waiting for pid 79057
[2025-04-19 17:05:44] 2025-04-19 21:05:21,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 17:05:44] 2025-04-19 21:05:21,125 | INFO     | collected zombie processes
[2025-04-19 17:05:44] 2025-04-19 21:05:21,125 | INFO     | will attempt to kill all subprocesses of pid=79057
[2025-04-19 17:05:44] 2025-04-19 21:05:26,646 | INFO     | process IDs to be killed: [79057] (in reverse order)
[2025-04-19 17:05:44] 2025-04-19 21:05:27,076 | INFO     | PID=88591 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 17:05:44] 2025-04-19 21:05:27,077 | INFO     | .. there are 91 such processes running
[2025-04-19 17:05:44] 2025-04-19 21:05:28,510 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 17:05:44] 2025-04-19 21:05:28,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 17:05:44] 2025-04-19 21:05:28,563 | INFO     | did not find any defunct processes belonging to 79057
[2025-04-19 17:05:44] 2025-04-19 21:05:28,861 | INFO     | did not find any defunct processes belonging to 79057
[2025-04-19 17:05:44] 2025-04-19 21:05:28,862 | INFO     | ready for new job
[2025-04-19 17:05:44] 2025-04-19 21:05:28,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 17:05:44] 2025-04-19 21:05:28,865 | INFO     | **************************************
[2025-04-19 17:05:44] 2025-04-19 21:05:28,865 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 17:05:44] 2025-04-19 21:05:28,865 | INFO     | **************************************
[2025-04-19 17:05:44] 2025-04-19 21:05:28,865 | INFO     | 
[2025-04-19 17:05:44] 2025-04-19 21:05:29,001 | INFO     | architecture information:
[2025-04-19 17:05:44] 2025-04-19 21:05:29,019 | INFO     | executing command: cat /etc/os-release
[2025-04-19 17:05:44] 2025-04-19 21:05:29,319 | INFO     | cat /etc/os-release:
[2025-04-19 17:05:44] NAME="CentOS Linux"
[2025-04-19 17:05:44] VERSION="7 (Core)"
[2025-04-19 17:05:44] ID="centos"
[2025-04-19 17:05:44] ID_LIKE="rhel fedora"
[2025-04-19 17:05:44] VERSION_ID="7"
[2025-04-19 17:05:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 17:05:44] ANSI_COLOR="0;31"
[2025-04-19 17:05:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 17:05:44] HOME_URL="https://www.centos.org/"
[2025-04-19 17:05:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 17:05:44] 
[2025-04-19 17:05:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 17:05:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 17:05:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 17:05:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 17:05:44] 
[2025-04-19 17:05:44] 2025-04-19 21:05:29,320 | INFO     | **************************************
[2025-04-19 17:05:44] 2025-04-19 21:05:29,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-19 17:05:44] 2025-04-19 21:05:30,015 | INFO     | sufficient remaining disk space (100936974336 B)
[2025-04-19 17:05:44] 2025-04-19 21:05:30,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 17:05:44] 2025-04-19 21:05:30,016 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 17:05:44] 2025-04-19 21:05:30,016 | INFO     | update_server=False
[2025-04-19 17:05:44] 2025-04-19 21:05:30,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 17:05:44] 2025-04-19 21:05:30,019 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 17:05:44] 2025-04-19 21:05:30,020 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 17:05:44] 2025-04-19 21:05:30,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 17:05:44] 2025-04-19 21:05:30,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 17:05:44] 2025-04-19 21:05:30,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 17:05:44] 2025-04-19 21:05:30,173 | INFO     | aborting loop
[2025-04-19 17:05:44] 2025-04-19 21:05:30,409 | INFO     | all data control threads have been joined
[2025-04-19 17:05:44] 2025-04-19 21:05:30,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 17:05:44] 2025-04-19 21:05:30,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 17:05:44] 2025-04-19 21:05:31,021 | INFO     | [job] retrieve thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:31,034 | INFO     | all payload control threads have been joined
[2025-04-19 17:05:44] 2025-04-19 21:05:31,179 | INFO     | [job] job monitor thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:31,320 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:31,402 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:31,414 | INFO     | [data] control thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:31,489 | INFO     | [payload] failed_post thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:31,652 | INFO     | all job control threads have been joined
[2025-04-19 17:05:44] 2025-04-19 21:05:32,039 | INFO     | [payload] control thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:32,191 | INFO     | [payload] validate_post thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:32,255 | INFO     | [job] validate thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:32,261 | INFO     | [data] copytool_in thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:32,395 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:32,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 17:05:44] 2025-04-19 21:05:32,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:32,659 | INFO     | [job] control thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:32,810 | INFO     | [data] copytool_out thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:33,430 | INFO     | [job] queue monitor thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:34,685 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 17:05:44] 2025-04-19 21:05:35,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662190724928)>', '<ExcThread(monitor, started 140661881808640)>']
[2025-04-19 17:05:44] 2025-04-19 21:05:36,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 17:05:44] 2025-04-19 21:05:36,069 | INFO     | [monitor] control thread has ended
[2025-04-19 17:05:44] 2025-04-19 21:05:40,290 | INFO     | all workflow threads have been joined
[2025-04-19 17:05:44] 2025-04-19 21:05:40,290 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 17:05:44] 2025-04-19 21:05:40,291 | INFO     | traces error code: 0
[2025-04-19 17:05:44] 2025-04-19 21:05:40,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 17:05:44] 2025-04-19 21:05:41,109 [wrapper] ==== pilot stdout END ====
[2025-04-19 17:05:44] 2025-04-19 21:05:41,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 17:05:44] 2025-04-19 21:05:41,179 [wrapper] pilotpid: 88591
[2025-04-19 17:05:44] 2025-04-19 21:05:41,205 [wrapper] Pilot exit status: 0
[2025-04-19 17:05:44] 2025-04-19 21:05:41,419 [wrapper] pandaids: 6607430960
[2025-04-19 17:05:44] 2025-04-19 21:05:42,426 [wrapper] cleanup supervisor_pilot  7340 88592
[2025-04-19 17:05:44] 2025-04-19 21:05:42,455 [wrapper] Test setup, not cleaning
[2025-04-19 17:05:44] 2025-04-19 21:05:42,485 [wrapper] apfmon messages muted
[2025-04-19 17:05:44] 2025-04-19 21:05:42,519 [wrapper] ==== wrapper stdout END ====
[2025-04-19 17:05:44] 2025-04-19 21:05:42,555 [wrapper] ==== wrapper stderr END ====
[2025-04-19 17:05:44]  *** Error codes and diagnostics ***
[2025-04-19 17:05:44]     "exeErrorCode": 0,
[2025-04-19 17:05:44]     "exeErrorDiag": "",
[2025-04-19 17:05:44]     "pilotErrorCode": 0,
[2025-04-19 17:05:44]     "pilotErrorDiag": "",
[2025-04-19 17:05:44]  *** Listing of results directory ***
[2025-04-19 17:05:44] total 417192
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 01:48 pilot3.tar.gz
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 02:17 queuedata.json
[2025-04-19 17:05:44] -rwx------ 1 boincer umatlas     37140 Apr 19 02:18 runpilot2-wrapper.sh
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas       100 Apr 19 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 17:05:44] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 05:45 run_atlas
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas       105 Apr 19 05:45 job.xml
[2025-04-19 17:05:44] -rw-r--r-- 2 boincer umatlas 224128783 Apr 19 05:45 EVNT.44075481._003057.pool.root.1
[2025-04-19 17:05:44] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 05:45 start_atlas.sh
[2025-04-19 17:05:44] drwxrwx--x 2 boincer umatlas      4096 Apr 19 05:45 shared
[2025-04-19 17:05:44] -rw-r--r-- 2 boincer umatlas    508898 Apr 19 05:45 input.tar.gz
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas         0 Apr 19 05:45 boinc_lockfile
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 05:45 pandaJob.out
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas       424 Apr 19 05:46 setup.sh.local
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas    991300 Apr 19 05:47 agis_schedconf.cvmfs.json
[2025-04-19 17:05:44] drwx------ 4 boincer umatlas      4096 Apr 19 05:47 pilot3
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas 192878026 Apr 19 17:01 HITS.44075483._078801.pool.root.1
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas      6302 Apr 19 17:01 init_data.xml
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas       531 Apr 19 17:02 boinc_task_state.xml
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas      1075 Apr 19 17:03 memory_monitor_summary.json
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas   1618536 Apr 19 17:03 agis_ddmendpoints.agis.ALL.json
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas    586504 Apr 19 17:04 log.44075483._078801.job.log.tgz.1
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas      7745 Apr 19 17:05 heartbeat.json
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas        95 Apr 19 17:05 pilot_heartbeat.json
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas      4477 Apr 19 17:05 pilotlog.txt
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 17:05 boinc_mmap_file
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas   2574365 Apr 19 17:05 log.44075483._078801.job.log.1
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas       357 Apr 19 17:05 output.list
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas        28 Apr 19 17:05 wrapper_checkpoint.txt
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas       620 Apr 19 17:05 runtime_log
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas   3184640 Apr 19 17:05 result.tar.gz
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas       663 Apr 19 17:05 vlMNDmOiGQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCD6KDmpYOjTm.diag
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas     11014 Apr 19 17:05 runtime_log.err
[2025-04-19 17:05:44] -rw-r--r-- 1 boincer umatlas     21032 Apr 19 17:05 stderr.txt
[2025-04-19 17:05:44] HITS file was successfully produced:
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas 192878026 Apr 19 17:01 shared/HITS.pool.root.1
[2025-04-19 17:05:44]  *** Contents of shared directory: ***
[2025-04-19 17:05:44] total 410876
[2025-04-19 17:05:44] -rw-r--r-- 2 boincer umatlas 224128783 Apr 19 05:45 ATLAS.root_0
[2025-04-19 17:05:44] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 05:45 start_atlas.sh
[2025-04-19 17:05:44] -rw-r--r-- 2 boincer umatlas    508898 Apr 19 05:45 input.tar.gz
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas 192878026 Apr 19 17:01 HITS.pool.root.1
[2025-04-19 17:05:44] -rw------- 1 boincer umatlas   3184640 Apr 19 17:05 result.tar.gz
17:05:45 (51368): run_atlas exited; CPU time 39078.490448
17:05:45 (51368): called boinc_finish(0)

</stderr_txt>
]]>

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