Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:47:57 (29659): wrapper (7.7.26015): starting
04:47:57 (29659): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 04:47:57] Arguments: --nthreads 12
[2025-04-19 04:47:57] Threads: 12
[2025-04-19 04:47:57] Checking for CVMFS
[2025-04-19 04:47:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 04:47:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 04:47:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 04:47:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 04:47:58] 2.11.2.0 24956 369917 164364 145031 1 58 10306802 20275200 1 130560 0 24338371 99.971 7766046 54645 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 04:47:58] CVMFS is ok
[2025-04-19 04:47:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 04:47:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 04:47:58] Further information can be found at the LHC@home message board.
[2025-04-19 04:47:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 04:47:58] Checking for apptainer binary...
[2025-04-19 04:47:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 04:47:58] Running /usr/bin/apptainer --version
[2025-04-19 04:47:58] apptainer version 1.3.2-1.el7
[2025-04-19 04:47:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 04:47:59] c-205-8.aglt2.org
[2025-04-19 04:47:59] apptainer works
[2025-04-19 04:47:59] Set ATHENA_PROC_NUMBER=12
[2025-04-19 04:47:59] Set ATHENA_CORE_NUMBER=12
[2025-04-19 04:47:59] Starting ATLAS job with PandaID=6607430396
[2025-04-19 04:47:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 06:11:48]  *** The last 200 lines of the pilot log: ***
[2025-04-19 06:11:48]  workdir=None
[2025-04-19 06:11:48] ]
[2025-04-19 06:11:48] 2025-04-19 10:11:24,773 | INFO     | transferring file log.44075483._078677.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607430396/log.44075483._078677.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 06:11:48] 2025-04-19 10:11:24,773 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607430396/log.44075483._078677.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._078677.job
[2025-04-19 06:11:48] 2025-04-19 10:11:24,795 | INFO     | adding to output.list: log.44075483._078677.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/2c/log.44075483._078677.job.log.tg
[2025-04-19 06:11:48] 2025-04-19 10:11:24,796 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 06:11:48] 2025-04-19 10:11:24,797 | INFO     | summary of transferred files:
[2025-04-19 06:11:48] 2025-04-19 10:11:24,797 | INFO     |  -- lfn=log.44075483._078677.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 06:11:48] 2025-04-19 10:11:24,797 | INFO     | stage-out finished correctly
[2025-04-19 06:11:48] 2025-04-19 10:11:24,979 | WARNING  | process 7439 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 06:11:48] 2025-04-19 10:11:24,979 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607430396/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 06:11:48] 2025-04-19 10:11:24,980 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607430396/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 06:11:48] 2025-04-19 10:11:24,981 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4357620 B
[2025-04-19 06:11:48] 2025-04-19 10:11:24,981 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15548 B
[2025-04-19 06:11:48] 2025-04-19 10:11:24,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 06:11:48] 2025-04-19 10:11:24,996 | INFO     | sufficient remaining disk space (29391585280 B)
[2025-04-19 06:11:48] 2025-04-19 10:11:24,996 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-19 06:11:48] 2025-04-19 10:11:24,997 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6607430396: 4658607 B (within 2537553920 B limit)
[2025-04-19 06:11:48] 2025-04-19 10:11:24,997 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6607430396/HITS.44075483._078677.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-19 06:11:48] 2025-04-19 10:11:24,998 | INFO     | total size of present files: 0 B (workdir size: 4658607 B)
[2025-04-19 06:11:48] 2025-04-19 10:11:24,998 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6607430396/HITS.44075483._078677.pool.root.1 since it does not exist
[2025-04-19 06:11:48] 2025-04-19 10:11:25,089 | INFO     | number of running child processes to parent process 7439: 1
[2025-04-19 06:11:48] 2025-04-19 10:11:25,089 | INFO     | maximum number of monitored processes: 6
[2025-04-19 06:11:48] 2025-04-19 10:11:26,853 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 06:11:48] 2025-04-19 10:11:27,592 | INFO     | monitor loop #373: job 0:6607430396 is in state 'finished'
[2025-04-19 06:11:48] 2025-04-19 10:11:27,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:11:48] 2025-04-19 10:11:28,260 | INFO     | job 6607430396 has state=finished
[2025-04-19 06:11:48] 2025-04-19 10:11:28,261 | INFO     | preparing for final server update for job 6607430396 in state='finished'
[2025-04-19 06:11:48] 2025-04-19 10:11:28,268 | INFO     | this job has now completed (state=finished)
[2025-04-19 06:11:48] 2025-04-19 10:11:28,268 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 06:11:48] 2025-04-19 10:11:28,268 | INFO     | log transfer has been attempted: DONE
[2025-04-19 06:11:48] 2025-04-19 10:11:28,268 | INFO     | job 6607430396 has finished - writing final server update
[2025-04-19 06:11:48] 2025-04-19 10:11:28,268 | INFO     | total number of processed events: 400 (read)
[2025-04-19 06:11:48] 2025-04-19 10:11:28,270 | INFO     | executing command: lscpu
[2025-04-19 06:11:48] 2025-04-19 10:11:28,296 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 06:11:48] 2025-04-19 10:11:30,095 | INFO     | monitor loop #374: job 0:6607430396 is in state 'finished'
[2025-04-19 06:11:48] 2025-04-19 10:11:30,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:11:48] 2025-04-19 10:11:32,598 | INFO     | monitor loop #375: job 0:6607430396 is in state 'finished'
[2025-04-19 06:11:48] 2025-04-19 10:11:32,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 06:11:48] 2025-04-19 10:11:33,011 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 06:11:48] 2025-04-19 10:11:33,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607430396/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 06:11:48] 2025-04-19 10:11:33,012 | INFO     | extracted standard info from prmon json
[2025-04-19 06:11:48] 2025-04-19 10:11:33,012 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 06:11:48] 2025-04-19 10:11:33,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 06:11:48] 2025-04-19 10:11:33,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 06:11:48] 2025-04-19 10:11:33,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 06:11:48] 2025-04-19 10:11:33,016 | INFO     | fitting pss+swap vs Time
[2025-04-19 06:11:48] 2025-04-19 10:11:33,016 | INFO     | sum of square deviations: 130793150.0
[2025-04-19 06:11:48] 2025-04-19 10:11:33,017 | INFO     | sum of deviations: 19191309918.0
[2025-04-19 06:11:48] 2025-04-19 10:11:33,017 | INFO     | mean x: 1745055084.0
[2025-04-19 06:11:48] 2025-04-19 10:11:33,017 | INFO     | mean y: 2559087.0933333333
[2025-04-19 06:11:48] 2025-04-19 10:11:33,017 | INFO     | -- intersect: -256049787240.10748
[2025-04-19 06:11:48] 2025-04-19 10:11:33,017 | INFO     | intersect: -256049787240.10748
[2025-04-19 06:11:48] 2025-04-19 10:11:33,018 | INFO     | chi2: 2.0903722535307687
[2025-04-19 06:11:48] 2025-04-19 10:11:33,018 | INFO     | -- intersect: -256049787240.10748
[2025-04-19 06:11:48] 2025-04-19 10:11:33,018 | INFO     | current memory leak: 146.73 B/s (using 75 data points, chi2=2.09)
[2025-04-19 06:11:48] 2025-04-19 10:11:33,019 | INFO     | ..............................
[2025-04-19 06:11:48] 2025-04-19 10:11:33,019 | INFO     | . Timing measurements:
[2025-04-19 06:11:48] 2025-04-19 10:11:33,019 | INFO     | . get job = 0 s
[2025-04-19 06:11:48] 2025-04-19 10:11:33,019 | INFO     | . initial setup = 3 s
[2025-04-19 06:11:48] 2025-04-19 10:11:33,019 | INFO     | . payload setup = 7 s
[2025-04-19 06:11:48] 2025-04-19 10:11:33,019 | INFO     | . stage-in = 0 s
[2025-04-19 06:11:48] 2025-04-19 10:11:33,019 | INFO     | . payload execution = 4962 s
[2025-04-19 06:11:48] 2025-04-19 10:11:33,019 | INFO     | . stage-out = 0 s
[2025-04-19 06:11:48] 2025-04-19 10:11:33,020 | INFO     | . log creation = 0 s
[2025-04-19 06:11:48] 2025-04-19 10:11:33,020 | INFO     | ..............................
[2025-04-19 06:11:48] 2025-04-19 10:11:33,105 | INFO     | 
[2025-04-19 06:11:48] 2025-04-19 10:11:33,105 | INFO     | job summary report
[2025-04-19 06:11:48] 2025-04-19 10:11:33,105 | INFO     | --------------------------------------------------
[2025-04-19 06:11:48] 2025-04-19 10:11:33,105 | INFO     | PanDA job id: 6607430396
[2025-04-19 06:11:48] 2025-04-19 10:11:33,106 | INFO     | task id: 44075483
[2025-04-19 06:11:48] 2025-04-19 10:11:33,106 | INFO     | errors: (none)
[2025-04-19 06:11:48] 2025-04-19 10:11:33,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 06:11:48] 2025-04-19 10:11:33,106 | INFO     | pilot state: finished 
[2025-04-19 06:11:48] 2025-04-19 10:11:33,106 | INFO     | transexitcode: 0
[2025-04-19 06:11:48] 2025-04-19 10:11:33,106 | INFO     | exeerrorcode: 0
[2025-04-19 06:11:48] 2025-04-19 10:11:33,107 | INFO     | exeerrordiag: 
[2025-04-19 06:11:48] 2025-04-19 10:11:33,107 | INFO     | exitcode: 0
[2025-04-19 06:11:48] 2025-04-19 10:11:33,107 | INFO     | exitmsg: OK
[2025-04-19 06:11:48] 2025-04-19 10:11:33,107 | INFO     | cpuconsumptiontime: 47364 s
[2025-04-19 06:11:48] 2025-04-19 10:11:33,107 | INFO     | nevents: 400
[2025-04-19 06:11:48] 2025-04-19 10:11:33,107 | INFO     | neventsw: 0
[2025-04-19 06:11:48] 2025-04-19 10:11:33,108 | INFO     | pid: 7439
[2025-04-19 06:11:48] 2025-04-19 10:11:33,108 | INFO     | pgrp: 7439
[2025-04-19 06:11:48] 2025-04-19 10:11:33,108 | INFO     | corecount: 12
[2025-04-19 06:11:48] 2025-04-19 10:11:33,108 | INFO     | event service: False
[2025-04-19 06:11:48] 2025-04-19 10:11:33,108 | INFO     | sizes: {0: 2425995, 1: 2426851, 6: 2427057, 12: 2427085, 4974: 2453204, 4976: 2462145, 4978: 2462357, 4984: 2462527}
[2025-04-19 06:11:48] 2025-04-19 10:11:33,108 | INFO     | --------------------------------------------------
[2025-04-19 06:11:48] 2025-04-19 10:11:33,109 | INFO     | 
[2025-04-19 06:11:48] 2025-04-19 10:11:33,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 06:11:48] 2025-04-19 10:11:33,131 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,132 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,132 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,132 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,134 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 06:11:48] 2025-04-19 10:11:33,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 06:11:48] 2025-04-19 10:11:33,135 | INFO     | job 6607430396 has completed (purged errors)
[2025-04-19 06:11:48] 2025-04-19 10:11:33,135 | INFO     | overall cleanup function is called
[2025-04-19 06:11:48] 2025-04-19 10:11:34,143 | INFO     | --- collectZombieJob: --- 10, [7439]
[2025-04-19 06:11:48] 2025-04-19 10:11:34,143 | INFO     | zombie collector waiting for pid 7439
[2025-04-19 06:11:48] 2025-04-19 10:11:34,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 06:11:48] 2025-04-19 10:11:34,144 | INFO     | collected zombie processes
[2025-04-19 06:11:48] 2025-04-19 10:11:34,144 | INFO     | will attempt to kill all subprocesses of pid=7439
[2025-04-19 06:11:48] 2025-04-19 10:11:34,234 | INFO     | process IDs to be killed: [7439] (in reverse order)
[2025-04-19 06:11:48] 2025-04-19 10:11:34,285 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 06:11:48] 2025-04-19 10:11:34,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 06:11:48] 2025-04-19 10:11:34,289 | INFO     | did not find any defunct processes belonging to 7439
[2025-04-19 06:11:48] 2025-04-19 10:11:34,291 | INFO     | did not find any defunct processes belonging to 7439
[2025-04-19 06:11:48] 2025-04-19 10:11:34,291 | INFO     | ready for new job
[2025-04-19 06:11:48] 2025-04-19 10:11:34,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 06:11:48] 2025-04-19 10:11:34,292 | INFO     | **************************************
[2025-04-19 06:11:48] 2025-04-19 10:11:34,292 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 06:11:48] 2025-04-19 10:11:34,292 | INFO     | **************************************
[2025-04-19 06:11:48] 2025-04-19 10:11:34,292 | INFO     | 
[2025-04-19 06:11:48] 2025-04-19 10:11:34,293 | INFO     | architecture information:
[2025-04-19 06:11:48] 2025-04-19 10:11:34,293 | INFO     | executing command: cat /etc/os-release
[2025-04-19 06:11:48] 2025-04-19 10:11:34,308 | INFO     | cat /etc/os-release:
[2025-04-19 06:11:48] NAME="CentOS Linux"
[2025-04-19 06:11:48] VERSION="7 (Core)"
[2025-04-19 06:11:48] ID="centos"
[2025-04-19 06:11:48] ID_LIKE="rhel fedora"
[2025-04-19 06:11:48] VERSION_ID="7"
[2025-04-19 06:11:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 06:11:48] ANSI_COLOR="0;31"
[2025-04-19 06:11:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 06:11:48] HOME_URL="https://www.centos.org/"
[2025-04-19 06:11:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 06:11:48] 
[2025-04-19 06:11:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 06:11:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 06:11:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 06:11:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 06:11:48] 
[2025-04-19 06:11:48] 2025-04-19 10:11:34,308 | INFO     | **************************************
[2025-04-19 06:11:48] 2025-04-19 10:11:34,811 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 06:11:48] 2025-04-19 10:11:34,828 | INFO     | sufficient remaining disk space (29396828160 B)
[2025-04-19 06:11:48] 2025-04-19 10:11:34,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 06:11:48] 2025-04-19 10:11:34,828 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 06:11:48] 2025-04-19 10:11:34,829 | INFO     | update_server=False
[2025-04-19 06:11:48] 2025-04-19 10:11:34,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 06:11:48] 2025-04-19 10:11:34,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:11:48] 2025-04-19 10:11:34,857 | INFO     | all job control threads have been joined
[2025-04-19 06:11:48] 2025-04-19 10:11:34,889 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 06:11:48] 2025-04-19 10:11:34,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 06:11:48] 2025-04-19 10:11:34,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 06:11:48] 2025-04-19 10:11:35,101 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 06:11:48] 2025-04-19 10:11:35,102 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 06:11:48] 2025-04-19 10:11:35,102 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 06:11:48] 2025-04-19 10:11:35,102 | INFO     | will abort loop
[2025-04-19 06:11:48] 2025-04-19 10:11:35,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 06:11:48] 2025-04-19 10:11:35,463 | INFO     | all payload control threads have been joined
[2025-04-19 06:11:48] 2025-04-19 10:11:35,570 | INFO     | all data control threads have been joined
[2025-04-19 06:11:48] 2025-04-19 10:11:35,832 | INFO     | [job] queue monitor thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:35,834 | INFO     | [job] retrieve thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:35,861 | INFO     | [job] control thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:35,918 | INFO     | [data] copytool_in thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,009 | INFO     | [payload] failed_post thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,031 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,107 | INFO     | [job] job monitor thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,362 | INFO     | [job] validate thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,464 | INFO     | [payload] control thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,576 | INFO     | [data] control thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,861 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,929 | INFO     | [payload] validate_post thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:36,947 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:37,406 | INFO     | [data] copytool_out thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:37,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 06:11:48] 2025-04-19 10:11:41,455 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 06:11:48] 2025-04-19 10:11:43,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513690974016)>', '<ExcThread(monitor, started 140512648480512)>']
[2025-04-19 06:11:48] 2025-04-19 10:11:43,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 06:11:48] 2025-04-19 10:11:43,932 | INFO     | [monitor] control thread has ended
[2025-04-19 06:11:48] 2025-04-19 10:11:48,280 | INFO     | all workflow threads have been joined
[2025-04-19 06:11:48] 2025-04-19 10:11:48,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 06:11:48] 2025-04-19 10:11:48,280 | INFO     | traces error code: 0
[2025-04-19 06:11:48] 2025-04-19 10:11:48,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 06:11:48] 2025-04-19 10:11:48,370 [wrapper] ==== pilot stdout END ====
[2025-04-19 06:11:48] 2025-04-19 10:11:48,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 06:11:48] 2025-04-19 10:11:48,378 [wrapper] pilotpid: 917
[2025-04-19 06:11:48] 2025-04-19 10:11:48,381 [wrapper] Pilot exit status: 0
[2025-04-19 06:11:48] 2025-04-19 10:11:48,396 [wrapper] pandaids: 6607430396
[2025-04-19 06:11:48] 2025-04-19 10:11:48,437 [wrapper] cleanup supervisor_pilot 29641 918
[2025-04-19 06:11:48] 2025-04-19 10:11:48,441 [wrapper] Test setup, not cleaning
[2025-04-19 06:11:48] 2025-04-19 10:11:48,444 [wrapper] apfmon messages muted
[2025-04-19 06:11:48] 2025-04-19 10:11:48,448 [wrapper] ==== wrapper stdout END ====
[2025-04-19 06:11:48] 2025-04-19 10:11:48,453 [wrapper] ==== wrapper stderr END ====
[2025-04-19 06:11:48]  *** Error codes and diagnostics ***
[2025-04-19 06:11:48]     "exeErrorCode": 0,
[2025-04-19 06:11:48]     "exeErrorDiag": "",
[2025-04-19 06:11:48]     "pilotErrorCode": 0,
[2025-04-19 06:11:48]     "pilotErrorDiag": "",
[2025-04-19 06:11:48]  *** Listing of results directory ***
[2025-04-19 06:11:48] total 413456
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 01:48 pilot3.tar.gz
[2025-04-19 06:11:48] -rwx------ 1 boincer umatlas     37140 Apr 19 02:07 runpilot2-wrapper.sh
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 02:07 queuedata.json
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas       100 Apr 19 04:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 06:11:48] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 04:47 run_atlas
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas       105 Apr 19 04:47 job.xml
[2025-04-19 06:11:48] -rw-r--r-- 2 boincer umatlas 222890054 Apr 19 04:47 EVNT.44075481._003052.pool.root.1
[2025-04-19 06:11:48] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 04:47 start_atlas.sh
[2025-04-19 06:11:48] drwxrwx--x 2 boincer umatlas      4096 Apr 19 04:47 shared
[2025-04-19 06:11:48] -rw-r--r-- 2 boincer umatlas    508890 Apr 19 04:47 input.tar.gz
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas         0 Apr 19 04:47 boinc_lockfile
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 04:47 pandaJob.out
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas       424 Apr 19 04:48 setup.sh.local
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas    991300 Apr 19 04:48 agis_schedconf.cvmfs.json
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas   1618536 Apr 19 04:48 agis_ddmendpoints.agis.ALL.json
[2025-04-19 06:11:48] drwx------ 4 boincer umatlas      4096 Apr 19 04:48 pilot3
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas      5866 Apr 19 06:10 init_data.xml
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas 194941495 Apr 19 06:10 HITS.44075483._078677.pool.root.1
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas        95 Apr 19 06:11 pilot_heartbeat.json
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas      1050 Apr 19 06:11 memory_monitor_summary.json
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas       529 Apr 19 06:11 boinc_task_state.xml
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas    371037 Apr 19 06:11 log.44075483._078677.job.log.tgz.1
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas      7755 Apr 19 06:11 heartbeat.json
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas        27 Apr 19 06:11 wrapper_checkpoint.txt
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 06:11 boinc_mmap_file
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas      4539 Apr 19 06:11 pilotlog.txt
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas    474131 Apr 19 06:11 log.44075483._078677.job.log.1
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas       357 Apr 19 06:11 output.list
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas       620 Apr 19 06:11 runtime_log
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas    860160 Apr 19 06:11 result.tar.gz
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas     11010 Apr 19 06:11 runtime_log.err
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas       657 Apr 19 06:11 622NDmTXGQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm0B6KDmgEAwQn.diag
[2025-04-19 06:11:48] -rw-r--r-- 1 boincer umatlas     22463 Apr 19 06:11 stderr.txt
[2025-04-19 06:11:48] HITS file was successfully produced:
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas 194941495 Apr 19 06:10 shared/HITS.pool.root.1
[2025-04-19 06:11:48]  *** Contents of shared directory: ***
[2025-04-19 06:11:48] total 409404
[2025-04-19 06:11:48] -rw-r--r-- 2 boincer umatlas 222890054 Apr 19 04:47 ATLAS.root_0
[2025-04-19 06:11:48] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 04:47 start_atlas.sh
[2025-04-19 06:11:48] -rw-r--r-- 2 boincer umatlas    508890 Apr 19 04:47 input.tar.gz
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas 194941495 Apr 19 06:10 HITS.pool.root.1
[2025-04-19 06:11:48] -rw------- 1 boincer umatlas    860160 Apr 19 06:11 result.tar.gz
06:11:50 (29659): run_atlas exited; CPU time 47349.997853
06:11:50 (29659): called boinc_finish(0)

</stderr_txt>
]]>

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