Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:25:36 (795304): wrapper (7.7.26015): starting
19:25:36 (795304): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 19:25:36] Arguments: --nthreads 4
[2025-04-19 19:25:36] Threads: 4
[2025-04-19 19:25:36] Checking for CVMFS
[2025-04-19 19:25:36] No cvmfs_config command found, will try listing directly
[2025-04-19 19:25:36] CVMFS is ok
[2025-04-19 19:25:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 19:25:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 19:25:36] Further information can be found at the LHC@home message board.
[2025-04-19 19:25:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 19:25:36] Checking for apptainer binary...
[2025-04-19 19:25:36] which: no apptainer in ((null))
[2025-04-19 19:25:36] apptainer is not installed, using version from CVMFS
[2025-04-19 19:25:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 19:25:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-04-19 19:25:36] apptainer works
[2025-04-19 19:25:36] Set ATHENA_PROC_NUMBER=4
[2025-04-19 19:25:36] Set ATHENA_CORE_NUMBER=4
[2025-04-19 19:25:36] Starting ATLAS job with PandaID=6607409329
[2025-04-19 19:25:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 19:28:40]  *** The last 200 lines of the pilot log: ***
[2025-04-19 19:28:40] 2025-04-19 17:28:25,476 | INFO     | ..............................
[2025-04-19 19:28:40] 2025-04-19 17:28:25,476 | INFO     | . Timing measurements:
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . get job = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . initial setup = 1 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . payload setup = 4 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . stage-in = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . payload execution = 6 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . stage-out = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . log creation = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | ..............................
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6607409329/pilotlog.txt
[2025-04-19 19:28:40] 2025-04-19 17:28:25,502 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-19 19:28:40] - Log from pilotlog.txt -
[2025-04-19 19:28:40] 2025-04-19 17:28:23,359 | INFO     | monitor loop #54: job 0:6607409329 is in state 'failed'
[2025-04-19 19:28:40] 2025-04-19 17:28:23,359 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,474 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 19:28:40] 2025-04-19 17:28:25,474 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6607409329/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,475 | INFO     | memory information not available: 'Max'
[2025-04-19 19:28:40] 2025-04-19 17:28:25,475 | WARNING  | found no stored workdir sizes
[2025-04-19 19:28:40] 2025-04-19 17:28:25,475 | INFO     | will not add max space = 0 B to job metrics
[2025-04-19 19:28:40] 2025-04-19 17:28:25,476 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,476 | INFO     | ..............................
[2025-04-19 19:28:40] 2025-04-19 17:28:25,476 | INFO     | . Timing measurements:
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . get job = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . initial setup = 1 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . payload setup = 4 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . stage-in = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . payload execution = 6 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . stage-out = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . log creation = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | ..............................
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6607409329/pilotlog.txt
[2025-04-19 19:28:40] 2025-04-19 17:28:25,504 | WARNING  | 
[2025-04-19 19:28:40] [begin log extracts]
[2025-04-19 19:28:40] - Log from pilotlog.txt -
[2025-04-19 19:28:40] 2025-04-19 17:28:23,359 | INFO     | monitor loop #54: job 0:6607409329 is in state 'failed'
[2025-04-19 19:28:40] 2025-04-19 17:28:23,359 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,474 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 19:28:40] 2025-04-19 17:28:25,474 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6607409329/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,475 | INFO     | memory information not available: 'Max'
[2025-04-19 19:28:40] 2025-04-19 17:28:25,475 | WARNING  | found no stored workdir sizes
[2025-04-19 19:28:40] 2025-04-19 17:28:25,475 | INFO     | will not add max space = 0 B to job metrics
[2025-04-19 19:28:40] 2025-04-19 17:28:25,476 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,476 | INFO     | ..............................
[2025-04-19 19:28:40] 2025-04-19 17:28:25,476 | INFO     | . Timing measurements:
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . get job = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . initial setup = 1 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . payload setup = 4 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . stage-in = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . payload execution = 6 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . stage-out = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | . log creation = 0 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | ..............................
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-19 19:28:40] 2025-04-19 17:28:25,477 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6607409329/pilotlog.txt
[2025-04-19 19:28:40] [end log extracts]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,505 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,506 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Sim_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,608 | INFO     | 
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | job summary report
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | --------------------------------------------------
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | PanDA job id: 6607409329
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | task id: 44178500
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Sim_tf.py: command not found
[2025-04-19 19:28:40] 
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | pilot error code: 1187
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | pilot error diag: metadata does not exist: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6607409329/metadata.xml
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | pilot state: failed 
[2025-04-19 19:28:40] 2025-04-19 17:28:25,609 | INFO     | transexitcode: 127
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | exeerrorcode: 0
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | exeerrordiag: 
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | exitcode: 0
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | exitmsg: 
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | cpuconsumptiontime: 15 s
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | nevents: 0
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | neventsw: 0
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | pid: 805634
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | pgrp: 805634
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | corecount: 4
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | event service: False
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | sizes: {0: 2425985, 1: 2426852, 7: 2427058, 12: 2427086, 14: 2431399, 15: 2435648, 17: 2435804, 140: 2435776}
[2025-04-19 19:28:40] 2025-04-19 17:28:25,610 | INFO     | --------------------------------------------------
[2025-04-19 19:28:40] 2025-04-19 17:28:25,611 | INFO     | 
[2025-04-19 19:28:40] 2025-04-19 17:28:25,611 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-04-19 19:28:40] 2025-04-19 17:28:25,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,641 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 19:28:40] 2025-04-19 17:28:25,643 | INFO     | job 6607409329 has completed (purged errors)
[2025-04-19 19:28:40] 2025-04-19 17:28:25,643 | INFO     | overall cleanup function is called
[2025-04-19 19:28:40] 2025-04-19 17:28:26,624 | INFO     | PID=799240 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 19:28:40] 2025-04-19 17:28:26,624 | INFO     | .. there are 24 such processes running
[2025-04-19 19:28:40] 2025-04-19 17:28:26,650 | INFO     | --- collectZombieJob: --- 10, [805634]
[2025-04-19 19:28:40] 2025-04-19 17:28:26,650 | INFO     | zombie collector waiting for pid 805634
[2025-04-19 19:28:40] 2025-04-19 17:28:26,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 19:28:40] 2025-04-19 17:28:26,650 | INFO     | collected zombie processes
[2025-04-19 19:28:40] 2025-04-19 17:28:26,650 | INFO     | will attempt to kill all subprocesses of pid=805634
[2025-04-19 19:28:40] 2025-04-19 17:28:27,240 | INFO     | process IDs to be killed: [805634] (in reverse order)
[2025-04-19 19:28:40] 2025-04-19 17:28:27,461 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 19:28:40] 2025-04-19 17:28:27,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 19:28:40] 2025-04-19 17:28:27,482 | INFO     | did not find any defunct processes belonging to 805634
[2025-04-19 19:28:40] 2025-04-19 17:28:27,499 | INFO     | did not find any defunct processes belonging to 805634
[2025-04-19 19:28:40] 2025-04-19 17:28:27,499 | INFO     | ready for new job
[2025-04-19 19:28:40] 2025-04-19 17:28:27,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 19:28:40] 2025-04-19 17:28:27,501 | INFO     | **************************************
[2025-04-19 19:28:40] 2025-04-19 17:28:27,501 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 19:28:40] 2025-04-19 17:28:27,501 | INFO     | **************************************
[2025-04-19 19:28:40] 2025-04-19 17:28:27,501 | INFO     | 
[2025-04-19 19:28:40] 2025-04-19 17:28:27,509 | INFO     | architecture information:
[2025-04-19 19:28:40] 2025-04-19 17:28:27,510 | INFO     | executing command: cat /etc/os-release
[2025-04-19 19:28:40] 2025-04-19 17:28:27,534 | INFO     | cat /etc/os-release:
[2025-04-19 19:28:40] NAME="CentOS Linux"
[2025-04-19 19:28:40] VERSION="7 (Core)"
[2025-04-19 19:28:40] ID="centos"
[2025-04-19 19:28:40] ID_LIKE="rhel fedora"
[2025-04-19 19:28:40] VERSION_ID="7"
[2025-04-19 19:28:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 19:28:40] ANSI_COLOR="0;31"
[2025-04-19 19:28:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 19:28:40] HOME_URL="https://www.centos.org/"
[2025-04-19 19:28:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 19:28:40] 
[2025-04-19 19:28:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 19:28:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 19:28:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 19:28:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 19:28:40] 
[2025-04-19 19:28:40] 2025-04-19 17:28:27,536 | INFO     | **************************************
[2025-04-19 19:28:40] 2025-04-19 17:28:28,039 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-04-19 19:28:40] 2025-04-19 17:28:28,064 | INFO     | sufficient remaining disk space (3328601751552 B)
[2025-04-19 19:28:40] 2025-04-19 17:28:28,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 19:28:40] 2025-04-19 17:28:28,065 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 19:28:40] 2025-04-19 17:28:28,065 | INFO     | update_server=False
[2025-04-19 19:28:40] 2025-04-19 17:28:28,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 19:28:40] 2025-04-19 17:28:28,345 | INFO     | all data control threads have been joined
[2025-04-19 19:28:40] 2025-04-19 17:28:28,370 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 19:28:40] 2025-04-19 17:28:28,370 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 19:28:40] 2025-04-19 17:28:28,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 19:28:40] 2025-04-19 17:28:28,370 | INFO     | will abort loop
[2025-04-19 19:28:40] 2025-04-19 17:28:28,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 19:28:40] 2025-04-19 17:28:28,630 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 19:28:40] 2025-04-19 17:28:28,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 19:28:40] 2025-04-19 17:28:28,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 19:28:40] 2025-04-19 17:28:28,678 | INFO     | all job control threads have been joined
[2025-04-19 19:28:40] 2025-04-19 17:28:29,070 | INFO     | [job] retrieve thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,233 | INFO     | [job] validate thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,351 | INFO     | [data] control thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,376 | INFO     | [job] job monitor thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,380 | INFO     | all payload control threads have been joined
[2025-04-19 19:28:40] 2025-04-19 17:28:29,468 | INFO     | [payload] validate_post thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,477 | INFO     | [data] copytool_in thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,514 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,683 | INFO     | [job] control thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,756 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:29,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 19:28:40] 2025-04-19 17:28:29,927 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:30,385 | INFO     | [payload] control thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:30,407 | INFO     | [data] copytool_out thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:30,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 19:28:40] 2025-04-19 17:28:30,655 | INFO     | [payload] failed_post thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:31,624 | INFO     | [job] queue monitor thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:33,834 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 19:28:40] 2025-04-19 17:28:35,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23294003275584)>', '<ExcThread(monitor, started 23293016930048)>']
[2025-04-19 19:28:40] 2025-04-19 17:28:35,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 19:28:40] 2025-04-19 17:28:35,664 | INFO     | [monitor] control thread has ended
[2025-04-19 19:28:40] 2025-04-19 17:28:40,135 | INFO     | all workflow threads have been joined
[2025-04-19 19:28:40] 2025-04-19 17:28:40,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 19:28:40] 2025-04-19 17:28:40,136 | INFO     | traces error code: 0
[2025-04-19 19:28:40] 2025-04-19 17:28:40,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 19:28:40] 2025-04-19 17:28:40,297 [wrapper] ==== pilot stdout END ====
[2025-04-19 19:28:40] 2025-04-19 17:28:40,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 19:28:40] 2025-04-19 17:28:40,305 [wrapper] pilotpid: 799240
[2025-04-19 19:28:40] 2025-04-19 17:28:40,309 [wrapper] Pilot exit status: 0
[2025-04-19 19:28:40] 2025-04-19 17:28:40,321 [wrapper] pandaids: 6607409329
[2025-04-19 19:28:40] 2025-04-19 17:28:40,444 [wrapper] cleanup supervisor_pilot  799246 799241
[2025-04-19 19:28:40] 2025-04-19 17:28:40,448 [wrapper] Test setup, not cleaning
[2025-04-19 19:28:40] 2025-04-19 17:28:40,452 [wrapper] apfmon messages muted
[2025-04-19 19:28:40] 2025-04-19 17:28:40,455 [wrapper] ==== wrapper stdout END ====
[2025-04-19 19:28:40] 2025-04-19 17:28:40,459 [wrapper] ==== wrapper stderr END ====
[2025-04-19 19:28:40]  *** Error codes and diagnostics ***
[2025-04-19 19:28:40]     "exeErrorCode": 0,
[2025-04-19 19:28:40]     "exeErrorDiag": "",
[2025-04-19 19:28:40]     "pilotErrorCode": 1305,
[2025-04-19 19:28:40]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Sim_tf.py: command not found",
[2025-04-19 19:28:40]  *** Listing of results directory ***
[2025-04-19 19:28:40] total 318464
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc    495897 Apr 19 07:20 pilot3.tar.gz
[2025-04-19 19:28:40] -rwx------ 1 boinc boinc     37140 Apr 19 07:27 runpilot2-wrapper.sh
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc      5111 Apr 19 07:27 queuedata.json
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc       100 Apr 19 19:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 19:28:40] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 19:25 run_atlas
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc       105 Apr 19 19:25 job.xml
[2025-04-19 19:28:40] -rw-r--r-- 2 boinc boinc 322090240 Apr 19 19:25 EVNT.44178498._000001.pool.root.1
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc      6676 Apr 19 19:25 init_data.xml
[2025-04-19 19:28:40] -rw-r--r-- 2 boinc boinc     17569 Apr 19 19:25 start_atlas.sh
[2025-04-19 19:28:40] drwxrwx--x 2 boinc boinc      4096 Apr 19 19:25 shared
[2025-04-19 19:28:40] -rw-r--r-- 2 boinc boinc    508874 Apr 19 19:25 input.tar.gz
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc         0 Apr 19 19:25 boinc_lockfile
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc      2572 Apr 19 19:25 pandaJob.out
[2025-04-19 19:28:40] -rw------- 1 boinc boinc       424 Apr 19 19:25 setup.sh.local
[2025-04-19 19:28:40] -rw------- 1 boinc boinc    991244 Apr 19 19:25 agis_schedconf.cvmfs.json
[2025-04-19 19:28:40] -rw------- 1 boinc boinc   1618536 Apr 19 19:25 agis_ddmendpoints.agis.ALL.json
[2025-04-19 19:28:40] drwx------ 4 boinc boinc      4096 Apr 19 19:25 pilot3
[2025-04-19 19:28:40] -rw------- 1 boinc boinc       273 Apr 19 19:26 memory_monitor_summary.json
[2025-04-19 19:28:40] -rw------- 1 boinc boinc      7625 Apr 19 19:26 log.44178500._000008.job.log.tgz.1
[2025-04-19 19:28:40] -rw------- 1 boinc boinc        95 Apr 19 19:27 pilot_heartbeat.json
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc        22 Apr 19 19:28 wrapper_checkpoint.txt
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc      8192 Apr 19 19:28 boinc_mmap_file
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc       522 Apr 19 19:28 boinc_task_state.xml
[2025-04-19 19:28:40] -rw------- 1 boinc boinc      2179 Apr 19 19:28 heartbeat.json
[2025-04-19 19:28:40] -rw------- 1 boinc boinc      4550 Apr 19 19:28 pilotlog.txt
[2025-04-19 19:28:40] -rw------- 1 boinc boinc     74378 Apr 19 19:28 log.44178500._000008.job.log.1
[2025-04-19 19:28:40] -rw------- 1 boinc boinc       188 Apr 19 19:28 output.list
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc       620 Apr 19 19:28 runtime_log
[2025-04-19 19:28:40] -rw------- 1 boinc boinc     92160 Apr 19 19:28 result.tar.gz
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc     11270 Apr 19 19:28 runtime_log.err
[2025-04-19 19:28:40] -rw------- 1 boinc boinc       647 Apr 19 19:28 flNNDmPuFQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmE5gLDmXE4tSm.diag
[2025-04-19 19:28:40] -rw-r--r-- 1 boinc boinc     21230 Apr 19 19:28 stderr.txt
[2025-04-19 19:28:40] No HITS result produced
[2025-04-19 19:28:40]  *** Contents of shared directory: ***
[2025-04-19 19:28:40] total 315160
[2025-04-19 19:28:40] -rw-r--r-- 2 boinc boinc 322090240 Apr 19 19:25 ATLAS.root_0
[2025-04-19 19:28:40] -rw-r--r-- 2 boinc boinc     17569 Apr 19 19:25 start_atlas.sh
[2025-04-19 19:28:40] -rw-r--r-- 2 boinc boinc    508874 Apr 19 19:25 input.tar.gz
[2025-04-19 19:28:40] -rw------- 1 boinc boinc     92160 Apr 19 19:28 result.tar.gz
19:28:41 (795304): run_atlas exited; CPU time 16.939033
19:28:41 (795304): called boinc_finish(0)

</stderr_txt>
]]>

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