Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:59:10 (11266): wrapper (7.7.26015): starting
03:59:10 (11266): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 03:59:10] Arguments: --nthreads 12
[2025-04-19 03:59:10] Threads: 12
[2025-04-19 03:59:10] Checking for CVMFS
[2025-04-19 03:59:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 03:59:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 03:59:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 03:59:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 03:59:10] 2.11.2.0 5277 369191 166436 145030 0 56 10691399 20275201 1 130560 0 24137985 99.952 7993876 52768 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 03:59:10] CVMFS is ok
[2025-04-19 03:59:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 03:59:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 03:59:10] Further information can be found at the LHC@home message board.
[2025-04-19 03:59:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 03:59:10] Checking for apptainer binary...
[2025-04-19 03:59:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 03:59:10] Running /usr/bin/apptainer --version
[2025-04-19 03:59:10] apptainer version 1.3.2-1.el7
[2025-04-19 03:59:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 03:59:12] c-205-15.aglt2.org
[2025-04-19 03:59:12] apptainer works
[2025-04-19 03:59:12] Set ATHENA_PROC_NUMBER=12
[2025-04-19 03:59:12] Set ATHENA_CORE_NUMBER=12
[2025-04-19 03:59:12] Starting ATLAS job with PandaID=6607300419
[2025-04-19 03:59:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 05:25:16]  *** The last 200 lines of the pilot log: ***
[2025-04-19 05:25:16]  is_tar=False
[2025-04-19 05:25:16]  lfn=log.44075483._078127.job.log.tgz.1
[2025-04-19 05:25:16]  mtime=0
[2025-04-19 05:25:16]  protocol_id=None
[2025-04-19 05:25:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 05:25:16]  replicas=None
[2025-04-19 05:25:16]  scope=mc23_13p6TeV
[2025-04-19 05:25:16]  status=None
[2025-04-19 05:25:16]  status_code=0
[2025-04-19 05:25:16]  storage_token=
[2025-04-19 05:25:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6607300419/log.44075483._078127.job.log.tgz.1
[2025-04-19 05:25:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/04/log.44075483._078127.job.log.tgz.1
[2025-04-19 05:25:16]  workdir=None
[2025-04-19 05:25:16] ]
[2025-04-19 05:25:16] 2025-04-19 09:24:55,463 | INFO     | transferring file log.44075483._078127.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607300419/log.44075483._078127.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 05:25:16] 2025-04-19 09:24:55,464 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607300419/log.44075483._078127.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._078127.job
[2025-04-19 05:25:16] 2025-04-19 09:24:55,486 | INFO     | adding to output.list: log.44075483._078127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/04/log.44075483._078127.job.log.tg
[2025-04-19 05:25:16] 2025-04-19 09:24:55,487 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 05:25:16] 2025-04-19 09:24:55,488 | INFO     | summary of transferred files:
[2025-04-19 05:25:16] 2025-04-19 09:24:55,488 | INFO     |  -- lfn=log.44075483._078127.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 05:25:16] 2025-04-19 09:24:55,488 | INFO     | stage-out finished correctly
[2025-04-19 05:25:16] 2025-04-19 09:24:55,572 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 05:25:16] 2025-04-19 09:24:56,996 | INFO     | job 6607300419 has state=finished
[2025-04-19 05:25:16] 2025-04-19 09:24:56,996 | INFO     | preparing for final server update for job 6607300419 in state='finished'
[2025-04-19 05:25:16] 2025-04-19 09:24:57,061 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-19 05:25:16] 2025-04-19 09:24:57,061 | INFO     | this job has now completed (state=finished)
[2025-04-19 05:25:16] 2025-04-19 09:24:57,061 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 05:25:16] 2025-04-19 09:24:57,062 | INFO     | log transfer has been attempted: DONE
[2025-04-19 05:25:16] 2025-04-19 09:24:57,062 | INFO     | job 6607300419 has finished - writing final server update
[2025-04-19 05:25:16] 2025-04-19 09:24:57,062 | INFO     | total number of processed events: 400 (read)
[2025-04-19 05:25:16] 2025-04-19 09:24:57,063 | INFO     | executing command: lscpu
[2025-04-19 05:25:16] 2025-04-19 09:24:57,090 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 05:25:16] 2025-04-19 09:24:58,652 | WARNING  | process 21237 can no longer be monitored (due to stat problems) - aborting
[2025-04-19 05:25:16] 2025-04-19 09:24:58,652 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607300419/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:25:16] 2025-04-19 09:24:58,745 | INFO     | number of running child processes to parent process 21237: 1
[2025-04-19 05:25:16] 2025-04-19 09:24:58,745 | INFO     | maximum number of monitored processes: 6
[2025-04-19 05:25:16] 2025-04-19 09:25:01,248 | INFO     | monitor loop #383: job 0:6607300419 is in state 'finished'
[2025-04-19 05:25:16] 2025-04-19 09:25:01,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 05:25:16] 2025-04-19 09:25:01,793 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 05:25:16] 2025-04-19 09:25:01,793 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607300419/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 05:25:16] 2025-04-19 09:25:01,794 | INFO     | extracted standard info from prmon json
[2025-04-19 05:25:16] 2025-04-19 09:25:01,794 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 05:25:16] 2025-04-19 09:25:01,794 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 05:25:16] 2025-04-19 09:25:01,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 05:25:16] 2025-04-19 09:25:01,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 05:25:16] 2025-04-19 09:25:01,796 | INFO     | fitting pss+swap vs Time
[2025-04-19 05:25:16] 2025-04-19 09:25:01,796 | INFO     | sum of square deviations: 141539398.0
[2025-04-19 05:25:16] 2025-04-19 09:25:01,797 | INFO     | sum of deviations: 24814220073.0
[2025-04-19 05:25:16] 2025-04-19 09:25:01,797 | INFO     | mean x: 1745052217.0
[2025-04-19 05:25:16] 2025-04-19 09:25:01,797 | INFO     | mean y: 2530780.5194805195
[2025-04-19 05:25:16] 2025-04-19 09:25:01,797 | INFO     | -- intersect: -305934263945.1056
[2025-04-19 05:25:16] 2025-04-19 09:25:01,797 | INFO     | intersect: -305934263945.1056
[2025-04-19 05:25:16] 2025-04-19 09:25:01,797 | INFO     | chi2: 1.6780258657853906
[2025-04-19 05:25:16] 2025-04-19 09:25:01,797 | INFO     | -- intersect: -305934263945.1056
[2025-04-19 05:25:16] 2025-04-19 09:25:01,798 | INFO     | current memory leak: 175.32 B/s (using 77 data points, chi2=1.68)
[2025-04-19 05:25:16] 2025-04-19 09:25:01,798 | INFO     | ..............................
[2025-04-19 05:25:16] 2025-04-19 09:25:01,798 | INFO     | . Timing measurements:
[2025-04-19 05:25:16] 2025-04-19 09:25:01,798 | INFO     | . get job = 0 s
[2025-04-19 05:25:16] 2025-04-19 09:25:01,798 | INFO     | . initial setup = 2 s
[2025-04-19 05:25:16] 2025-04-19 09:25:01,798 | INFO     | . payload setup = 7 s
[2025-04-19 05:25:16] 2025-04-19 09:25:01,798 | INFO     | . stage-in = 0 s
[2025-04-19 05:25:16] 2025-04-19 09:25:01,799 | INFO     | . payload execution = 5101 s
[2025-04-19 05:25:16] 2025-04-19 09:25:01,799 | INFO     | . stage-out = 0 s
[2025-04-19 05:25:16] 2025-04-19 09:25:01,799 | INFO     | . log creation = 0 s
[2025-04-19 05:25:16] 2025-04-19 09:25:01,799 | INFO     | ..............................
[2025-04-19 05:25:16] 2025-04-19 09:25:01,885 | INFO     | 
[2025-04-19 05:25:16] 2025-04-19 09:25:01,885 | INFO     | job summary report
[2025-04-19 05:25:16] 2025-04-19 09:25:01,886 | INFO     | --------------------------------------------------
[2025-04-19 05:25:16] 2025-04-19 09:25:01,886 | INFO     | PanDA job id: 6607300419
[2025-04-19 05:25:16] 2025-04-19 09:25:01,886 | INFO     | task id: 44075483
[2025-04-19 05:25:16] 2025-04-19 09:25:01,886 | INFO     | errors: (none)
[2025-04-19 05:25:16] 2025-04-19 09:25:01,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 05:25:16] 2025-04-19 09:25:01,886 | INFO     | pilot state: finished 
[2025-04-19 05:25:16] 2025-04-19 09:25:01,887 | INFO     | transexitcode: 0
[2025-04-19 05:25:16] 2025-04-19 09:25:01,887 | INFO     | exeerrorcode: 0
[2025-04-19 05:25:16] 2025-04-19 09:25:01,887 | INFO     | exeerrordiag: 
[2025-04-19 05:25:16] 2025-04-19 09:25:01,887 | INFO     | exitcode: 0
[2025-04-19 05:25:16] 2025-04-19 09:25:01,887 | INFO     | exitmsg: OK
[2025-04-19 05:25:16] 2025-04-19 09:25:01,887 | INFO     | cpuconsumptiontime: 47844 s
[2025-04-19 05:25:16] 2025-04-19 09:25:01,887 | INFO     | nevents: 400
[2025-04-19 05:25:16] 2025-04-19 09:25:01,888 | INFO     | neventsw: 0
[2025-04-19 05:25:16] 2025-04-19 09:25:01,888 | INFO     | pid: 21237
[2025-04-19 05:25:16] 2025-04-19 09:25:01,888 | INFO     | pgrp: 21237
[2025-04-19 05:25:16] 2025-04-19 09:25:01,888 | INFO     | corecount: 12
[2025-04-19 05:25:16] 2025-04-19 09:25:01,888 | INFO     | event service: False
[2025-04-19 05:25:16] 2025-04-19 09:25:01,888 | INFO     | sizes: {0: 2426773, 5: 2426979, 11: 2427035, 5112: 2453241, 5113: 2453240, 5114: 2462421, 5120: 2462535}
[2025-04-19 05:25:16] 2025-04-19 09:25:01,888 | INFO     | --------------------------------------------------
[2025-04-19 05:25:16] 2025-04-19 09:25:01,889 | INFO     | 
[2025-04-19 05:25:16] 2025-04-19 09:25:01,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 05:25:16] 2025-04-19 09:25:01,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,913 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 05:25:16] 2025-04-19 09:25:01,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 05:25:16] 2025-04-19 09:25:01,913 | INFO     | job 6607300419 has completed (purged errors)
[2025-04-19 05:25:16] 2025-04-19 09:25:01,913 | INFO     | overall cleanup function is called
[2025-04-19 05:25:16] 2025-04-19 09:25:02,921 | INFO     | --- collectZombieJob: --- 10, [21237]
[2025-04-19 05:25:16] 2025-04-19 09:25:02,922 | INFO     | zombie collector waiting for pid 21237
[2025-04-19 05:25:16] 2025-04-19 09:25:02,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 05:25:16] 2025-04-19 09:25:02,922 | INFO     | collected zombie processes
[2025-04-19 05:25:16] 2025-04-19 09:25:02,922 | INFO     | will attempt to kill all subprocesses of pid=21237
[2025-04-19 05:25:16] 2025-04-19 09:25:03,012 | INFO     | process IDs to be killed: [21237] (in reverse order)
[2025-04-19 05:25:16] 2025-04-19 09:25:03,060 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 05:25:16] 2025-04-19 09:25:03,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 05:25:16] 2025-04-19 09:25:03,064 | INFO     | did not find any defunct processes belonging to 21237
[2025-04-19 05:25:16] 2025-04-19 09:25:03,068 | INFO     | did not find any defunct processes belonging to 21237
[2025-04-19 05:25:16] 2025-04-19 09:25:03,068 | INFO     | ready for new job
[2025-04-19 05:25:16] 2025-04-19 09:25:03,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 05:25:16] 2025-04-19 09:25:03,069 | INFO     | **************************************
[2025-04-19 05:25:16] 2025-04-19 09:25:03,069 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 05:25:16] 2025-04-19 09:25:03,069 | INFO     | **************************************
[2025-04-19 05:25:16] 2025-04-19 09:25:03,069 | INFO     | 
[2025-04-19 05:25:16] 2025-04-19 09:25:03,070 | INFO     | architecture information:
[2025-04-19 05:25:16] 2025-04-19 09:25:03,070 | INFO     | executing command: cat /etc/os-release
[2025-04-19 05:25:16] 2025-04-19 09:25:03,084 | INFO     | cat /etc/os-release:
[2025-04-19 05:25:16] NAME="CentOS Linux"
[2025-04-19 05:25:16] VERSION="7 (Core)"
[2025-04-19 05:25:16] ID="centos"
[2025-04-19 05:25:16] ID_LIKE="rhel fedora"
[2025-04-19 05:25:16] VERSION_ID="7"
[2025-04-19 05:25:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 05:25:16] ANSI_COLOR="0;31"
[2025-04-19 05:25:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 05:25:16] HOME_URL="https://www.centos.org/"
[2025-04-19 05:25:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 05:25:16] 
[2025-04-19 05:25:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 05:25:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 05:25:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 05:25:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 05:25:16] 
[2025-04-19 05:25:16] 2025-04-19 09:25:03,084 | INFO     | **************************************
[2025-04-19 05:25:16] 2025-04-19 09:25:03,587 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 05:25:16] 2025-04-19 09:25:03,603 | INFO     | sufficient remaining disk space (29395779584 B)
[2025-04-19 05:25:16] 2025-04-19 09:25:03,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 05:25:16] 2025-04-19 09:25:03,604 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 05:25:16] 2025-04-19 09:25:03,604 | INFO     | update_server=False
[2025-04-19 05:25:16] 2025-04-19 09:25:03,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 05:25:16] 2025-04-19 09:25:03,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 05:25:16] 2025-04-19 09:25:03,605 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 05:25:16] 2025-04-19 09:25:03,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:25:16] 2025-04-19 09:25:03,606 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 05:25:16] 2025-04-19 09:25:03,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 05:25:16] 2025-04-19 09:25:03,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 05:25:16] 2025-04-19 09:25:03,752 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 05:25:16] 2025-04-19 09:25:03,752 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 05:25:16] 2025-04-19 09:25:03,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 05:25:16] 2025-04-19 09:25:03,752 | INFO     | will abort loop
[2025-04-19 05:25:16] 2025-04-19 09:25:03,846 | INFO     | all data control threads have been joined
[2025-04-19 05:25:16] 2025-04-19 09:25:04,610 | INFO     | [job] retrieve thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:04,611 | INFO     | [job] queue monitor thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:04,668 | INFO     | all payload control threads have been joined
[2025-04-19 05:25:16] 2025-04-19 09:25:04,702 | INFO     | [data] copytool_in thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:04,758 | INFO     | [job] job monitor thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:04,851 | INFO     | [data] control thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:04,876 | INFO     | [payload] failed_post thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:05,263 | INFO     | all job control threads have been joined
[2025-04-19 05:25:16] 2025-04-19 09:25:05,328 | INFO     | [payload] validate_post thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:05,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:05,610 | INFO     | [data] copytool_out thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:05,674 | INFO     | [payload] control thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:05,803 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:05,834 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:05,838 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:05,848 | INFO     | [job] validate thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:06,164 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 05:25:16] 2025-04-19 09:25:06,269 | INFO     | [job] control thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:10,169 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 05:25:16] 2025-04-19 09:25:11,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307183920960)>', '<ExcThread(monitor, started 140306271938304)>']
[2025-04-19 05:25:16] 2025-04-19 09:25:11,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 05:25:16] 2025-04-19 09:25:11,636 | INFO     | [monitor] control thread has ended
[2025-04-19 05:25:16] 2025-04-19 09:25:16,386 | INFO     | all workflow threads have been joined
[2025-04-19 05:25:16] 2025-04-19 09:25:16,386 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 05:25:16] 2025-04-19 09:25:16,387 | INFO     | traces error code: 0
[2025-04-19 05:25:16] 2025-04-19 09:25:16,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 05:25:16] 2025-04-19 09:25:16,465 [wrapper] ==== pilot stdout END ====
[2025-04-19 05:25:16] 2025-04-19 09:25:16,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 05:25:16] 2025-04-19 09:25:16,473 [wrapper] pilotpid: 14888
[2025-04-19 05:25:16] 2025-04-19 09:25:16,476 [wrapper] Pilot exit status: 0
[2025-04-19 05:25:16] 2025-04-19 09:25:16,493 [wrapper] pandaids: 6607300419
[2025-04-19 05:25:16] 2025-04-19 09:25:16,531 [wrapper] cleanup supervisor_pilot 10173 14889
[2025-04-19 05:25:16] 2025-04-19 09:25:16,535 [wrapper] Test setup, not cleaning
[2025-04-19 05:25:16] 2025-04-19 09:25:16,539 [wrapper] apfmon messages muted
[2025-04-19 05:25:16] 2025-04-19 09:25:16,543 [wrapper] ==== wrapper stdout END ====
[2025-04-19 05:25:16] 2025-04-19 09:25:16,547 [wrapper] ==== wrapper stderr END ====
[2025-04-19 05:25:16]  *** Error codes and diagnostics ***
[2025-04-19 05:25:16]     "exeErrorCode": 0,
[2025-04-19 05:25:16]     "exeErrorDiag": "",
[2025-04-19 05:25:16]     "pilotErrorCode": 0,
[2025-04-19 05:25:16]     "pilotErrorDiag": "",
[2025-04-19 05:25:16]  *** Listing of results directory ***
[2025-04-19 05:25:16] total 417160
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 00:54 pilot3.tar.gz
[2025-04-19 05:25:16] -rwx------ 1 boincer umatlas     37140 Apr 19 01:08 runpilot2-wrapper.sh
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 01:08 queuedata.json
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas       100 Apr 19 03:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 05:25:16] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 03:59 run_atlas
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas       105 Apr 19 03:59 job.xml
[2025-04-19 05:25:16] -rw-r--r-- 2 boincer umatlas 224101897 Apr 19 03:59 EVNT.44075481._003032.pool.root.1
[2025-04-19 05:25:16] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 03:59 start_atlas.sh
[2025-04-19 05:25:16] drwxrwx--x 2 boincer umatlas      4096 Apr 19 03:59 shared
[2025-04-19 05:25:16] -rw-r--r-- 2 boincer umatlas    508888 Apr 19 03:59 input.tar.gz
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas         0 Apr 19 03:59 boinc_lockfile
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas      2578 Apr 19 03:59 pandaJob.out
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas       424 Apr 19 03:59 setup.sh.local
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas    991300 Apr 19 03:59 agis_schedconf.cvmfs.json
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas   1618536 Apr 19 03:59 agis_ddmendpoints.agis.ALL.json
[2025-04-19 05:25:16] drwx------ 4 boincer umatlas      4096 Apr 19 03:59 pilot3
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas      5867 Apr 19 05:19 init_data.xml
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas 197478601 Apr 19 05:24 HITS.44075483._078127.pool.root.1
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas        95 Apr 19 05:24 pilot_heartbeat.json
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas       530 Apr 19 05:24 boinc_task_state.xml
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 05:24 boinc_mmap_file
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas        27 Apr 19 05:24 wrapper_checkpoint.txt
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas      1049 Apr 19 05:24 memory_monitor_summary.json
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas    378831 Apr 19 05:24 log.44075483._078127.job.log.tgz.1
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas      7752 Apr 19 05:25 heartbeat.json
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas      4662 Apr 19 05:25 pilotlog.txt
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas    485540 Apr 19 05:25 log.44075483._078127.job.log.1
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas       357 Apr 19 05:25 output.list
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas       620 Apr 19 05:25 runtime_log
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas    880640 Apr 19 05:25 result.tar.gz
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 05:25 runtime_log.err
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas       658 Apr 19 05:25 dhsNDmVcFQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmA95KDmuRrnIo.diag
[2025-04-19 05:25:16] -rw-r--r-- 1 boincer umatlas     21475 Apr 19 05:25 stderr.txt
[2025-04-19 05:25:16] HITS file was successfully produced:
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas 197478601 Apr 19 05:24 shared/HITS.pool.root.1
[2025-04-19 05:25:16]  *** Contents of shared directory: ***
[2025-04-19 05:25:16] total 413088
[2025-04-19 05:25:16] -rw-r--r-- 2 boincer umatlas 224101897 Apr 19 03:59 ATLAS.root_0
[2025-04-19 05:25:16] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 03:59 start_atlas.sh
[2025-04-19 05:25:16] -rw-r--r-- 2 boincer umatlas    508888 Apr 19 03:59 input.tar.gz
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas 197478601 Apr 19 05:24 HITS.pool.root.1
[2025-04-19 05:25:16] -rw------- 1 boincer umatlas    880640 Apr 19 05:25 result.tar.gz
05:25:17 (11266): run_atlas exited; CPU time 47825.010018
05:25:17 (11266): called boinc_finish(0)

</stderr_txt>
]]>

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