Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:12 (3315543): wrapper (7.7.26015): starting
03:55:12 (3315543): wrapper: running run_atlas (--nthreads 10)
[2025-04-19 03:55:12] Arguments: --nthreads 10
[2025-04-19 03:55:12] Threads: 10
[2025-04-19 03:55:12] Checking for CVMFS
[2025-04-19 03:55:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 03:55:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 03:55:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 03:55:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 03:55:16] 2.12.6.0 3646663 25305 234732 145030 2 440 24367539 32935937 14727 16776704 0 104302655 99.620 105193749 21948 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 03:55:16] CVMFS is ok
[2025-04-19 03:55:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 03:55:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 03:55:16] Further information can be found at the LHC@home message board.
[2025-04-19 03:55:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 03:55:16] Checking for apptainer binary...
[2025-04-19 03:55:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 03:55:16] Running /usr/bin/apptainer --version
[2025-04-19 03:55:16] apptainer version 1.4.0-1.el9
[2025-04-19 03:55:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 03:55:19] c-5-2.aglt2.org
[2025-04-19 03:55:19] apptainer works
[2025-04-19 03:55:19] Set ATHENA_PROC_NUMBER=10
[2025-04-19 03:55:19] Set ATHENA_CORE_NUMBER=10
[2025-04-19 03:55:19] Starting ATLAS job with PandaID=6607299384
[2025-04-19 03:55:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:07:41]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:07:41] 2025-04-19 15:07:24,449 | INFO     | mean y: 2297605.424170616
[2025-04-19 11:07:41] 2025-04-19 15:07:24,449 | INFO     | -- intersect: -15620848286.756538
[2025-04-19 11:07:41] 2025-04-19 15:07:24,449 | INFO     | intersect: -15620848286.756538
[2025-04-19 11:07:41] 2025-04-19 15:07:24,449 | INFO     | chi2: 5.821323682258345
[2025-04-19 11:07:41] 2025-04-19 15:07:24,450 | INFO     | sum of square deviations: 22483204058.26353
[2025-04-19 11:07:41] 2025-04-19 15:07:24,455 | INFO     | sum of deviations: 229238964399.20874
[2025-04-19 11:07:41] 2025-04-19 15:07:24,456 | INFO     | mean x: 1745062194.206235
[2025-04-19 11:07:41] 2025-04-19 15:07:24,456 | INFO     | mean y: 2301404.381294964
[2025-04-19 11:07:41] 2025-04-19 15:07:24,456 | INFO     | -- intersect: -17790369478.976093
[2025-04-19 11:07:41] 2025-04-19 15:07:24,456 | INFO     | intersect: -17790369478.976093
[2025-04-19 11:07:41] 2025-04-19 15:07:24,457 | INFO     | chi2: 5.1393255849361115
[2025-04-19 11:07:41] 2025-04-19 15:07:24,457 | INFO     | current chi2=5.1393255849361115 (change=11.71551582676566 %)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,457 | INFO     | right removable region: 416
[2025-04-19 11:07:41] 2025-04-19 15:07:24,458 | INFO     | sum of square deviations: 22482819508.004787
[2025-04-19 11:07:41] 2025-04-19 15:07:24,462 | INFO     | sum of deviations: 108022933824.80351
[2025-04-19 11:07:41] 2025-04-19 15:07:24,462 | INFO     | mean x: 1745062499.2134292
[2025-04-19 11:07:41] 2025-04-19 15:07:24,462 | INFO     | mean y: 2316312.2494004797
[2025-04-19 11:07:41] 2025-04-19 15:07:24,463 | INFO     | -- intersect: -8382164593.517891
[2025-04-19 11:07:41] 2025-04-19 15:07:24,463 | INFO     | intersect: -8382164593.517891
[2025-04-19 11:07:41] 2025-04-19 15:07:24,463 | INFO     | chi2: 3.223408449198408
[2025-04-19 11:07:41] 2025-04-19 15:07:24,464 | INFO     | current chi2=3.223408449198408 (change=44.62756882902091 %)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,464 | INFO     | sum of square deviations: 21683474090.63105
[2025-04-19 11:07:41] 2025-04-19 15:07:24,469 | INFO     | sum of deviations: 40939174770.47573
[2025-04-19 11:07:41] 2025-04-19 15:07:24,469 | INFO     | mean x: 1745062651.7330098
[2025-04-19 11:07:41] 2025-04-19 15:07:24,469 | INFO     | mean y: 2329106.067961165
[2025-04-19 11:07:41] 2025-04-19 15:07:24,469 | INFO     | -- intersect: -3292411606.8879843
[2025-04-19 11:07:41] 2025-04-19 15:07:24,470 | INFO     | intersect: -3292411606.8879843
[2025-04-19 11:07:41] 2025-04-19 15:07:24,470 | INFO     | chi2: 2.1583085093258716
[2025-04-19 11:07:41] 2025-04-19 15:07:24,470 | INFO     | current chi2=2.1583085093258716 (change=33.042661414423094 %)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,471 | INFO     | sum of square deviations: 20903216050.393257
[2025-04-19 11:07:41] 2025-04-19 15:07:24,475 | INFO     | sum of deviations: -16660637333.683067
[2025-04-19 11:07:41] 2025-04-19 15:07:24,476 | INFO     | mean x: 1745062804.2604423
[2025-04-19 11:07:41] 2025-04-19 15:07:24,476 | INFO     | mean y: 2340357.5724815726
[2025-04-19 11:07:41] 2025-04-19 15:07:24,476 | INFO     | -- intersect: 1393220040.210418
[2025-04-19 11:07:41] 2025-04-19 15:07:24,476 | INFO     | intersect: 1393220040.210418
[2025-04-19 11:07:41] 2025-04-19 15:07:24,477 | INFO     | chi2: 1.3390384366384667
[2025-04-19 11:07:41] 2025-04-19 15:07:24,477 | INFO     | current chi2=1.3390384366384667 (change=37.95889554933445 %)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,478 | INFO     | sum of square deviations: 20141963208.736485
[2025-04-19 11:07:41] 2025-04-19 15:07:24,482 | INFO     | sum of deviations: -50261524753.6368
[2025-04-19 11:07:41] 2025-04-19 15:07:24,482 | INFO     | mean x: 1745062956.7810946
[2025-04-19 11:07:41] 2025-04-19 15:07:24,482 | INFO     | mean y: 2347084.310945274
[2025-04-19 11:07:41] 2025-04-19 15:07:24,482 | INFO     | -- intersect: 4356913920.222155
[2025-04-19 11:07:41] 2025-04-19 15:07:24,482 | INFO     | intersect: 4356913920.222155
[2025-04-19 11:07:41] 2025-04-19 15:07:24,483 | INFO     | chi2: 1.032236988132468
[2025-04-19 11:07:41] 2025-04-19 15:07:24,483 | INFO     | current chi2=1.032236988132468 (change=22.912071835383276 %)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,484 | INFO     | left removable region: 40
[2025-04-19 11:07:41] 2025-04-19 15:07:24,484 | INFO     | sum of square deviations: 16480637429.763363
[2025-04-19 11:07:41] 2025-04-19 15:07:24,488 | INFO     | sum of deviations: -24423618900.284492
[2025-04-19 11:07:41] 2025-04-19 15:07:24,488 | INFO     | mean x: 1745063383.8271277
[2025-04-19 11:07:41] 2025-04-19 15:07:24,488 | INFO     | mean y: 2350599.949468085
[2025-04-19 11:07:41] 2025-04-19 15:07:24,488 | INFO     | -- intersect: 2588461921.4972186
[2025-04-19 11:07:41] 2025-04-19 15:07:24,488 | INFO     | intersect: 2588461921.4972186
[2025-04-19 11:07:41] 2025-04-19 15:07:24,489 | INFO     | chi2: 0.25455636973316886
[2025-04-19 11:07:41] 2025-04-19 15:07:24,489 | INFO     | -- intersect: 2588461921.4972186
[2025-04-19 11:07:41] 2025-04-19 15:07:24,489 | INFO     | current memory leak: -1.48 B/s (using 376 data points, chi2=0.25)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,490 | INFO     | ..............................
[2025-04-19 11:07:41] 2025-04-19 15:07:24,490 | INFO     | . Timing measurements:
[2025-04-19 11:07:41] 2025-04-19 15:07:24,490 | INFO     | . get job = 1 s
[2025-04-19 11:07:41] 2025-04-19 15:07:24,491 | INFO     | . initial setup = 5 s
[2025-04-19 11:07:41] 2025-04-19 15:07:24,491 | INFO     | . payload setup = 39 s
[2025-04-19 11:07:41] 2025-04-19 15:07:24,491 | INFO     | . stage-in = 0 s
[2025-04-19 11:07:41] 2025-04-19 15:07:24,491 | INFO     | . payload execution = 25726 s
[2025-04-19 11:07:41] 2025-04-19 15:07:24,491 | INFO     | . stage-out = 3 s
[2025-04-19 11:07:41] 2025-04-19 15:07:24,491 | INFO     | . log creation = 0 s
[2025-04-19 11:07:41] 2025-04-19 15:07:24,491 | INFO     | ..............................
[2025-04-19 11:07:41] 2025-04-19 15:07:24,634 | INFO     | 
[2025-04-19 11:07:41] 2025-04-19 15:07:24,634 | INFO     | job summary report
[2025-04-19 11:07:41] 2025-04-19 15:07:24,634 | INFO     | --------------------------------------------------
[2025-04-19 11:07:41] 2025-04-19 15:07:24,634 | INFO     | PanDA job id: 6607299384
[2025-04-19 11:07:41] 2025-04-19 15:07:24,634 | INFO     | task id: 44075483
[2025-04-19 11:07:41] 2025-04-19 15:07:24,634 | INFO     | errors: (none)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | pilot state: finished 
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | transexitcode: 0
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | exeerrorcode: 0
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | exeerrordiag: 
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | exitcode: 0
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | exitmsg: OK
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | cpuconsumptiontime: 50275 s
[2025-04-19 11:07:41] 2025-04-19 15:07:24,635 | INFO     | nevents: 400
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | neventsw: 0
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | pid: 3334121
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | pgrp: 3334121
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | corecount: 10
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | event service: False
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | sizes: {0: 2425996, 1: 2426597, 2: 2426681, 3: 2426908, 4: 2426936, 15: 2426936, 26: 2427092, 35: 2427326, 37: 2427354, 25770: 2462202, 25774: 2471479, 25801: 2471
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | --------------------------------------------------
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | 
[2025-04-19 11:07:41] 2025-04-19 15:07:24,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 11:07:41] 2025-04-19 15:07:24,684 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,684 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,684 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,684 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,684 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,684 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,684 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,685 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,686 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:07:41] 2025-04-19 15:07:24,686 | INFO     | job 6607299384 has completed (purged errors)
[2025-04-19 11:07:41] 2025-04-19 15:07:24,686 | INFO     | overall cleanup function is called
[2025-04-19 11:07:41] 2025-04-19 15:07:25,696 | INFO     | --- collectZombieJob: --- 10, [3334121]
[2025-04-19 11:07:41] 2025-04-19 15:07:25,696 | INFO     | zombie collector waiting for pid 3334121
[2025-04-19 11:07:41] 2025-04-19 15:07:25,696 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:07:41] 2025-04-19 15:07:25,696 | INFO     | collected zombie processes
[2025-04-19 11:07:41] 2025-04-19 15:07:25,696 | INFO     | will attempt to kill all subprocesses of pid=3334121
[2025-04-19 11:07:41] 2025-04-19 15:07:26,459 | INFO     | process IDs to be killed: [3334121] (in reverse order)
[2025-04-19 11:07:41] 2025-04-19 15:07:26,628 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:07:41] 2025-04-19 15:07:26,629 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:07:41] 2025-04-19 15:07:26,663 | INFO     | did not find any defunct processes belonging to 3334121
[2025-04-19 11:07:41] 2025-04-19 15:07:26,680 | INFO     | did not find any defunct processes belonging to 3334121
[2025-04-19 11:07:41] 2025-04-19 15:07:26,680 | INFO     | ready for new job
[2025-04-19 11:07:41] 2025-04-19 15:07:26,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:07:41] 2025-04-19 15:07:26,682 | INFO     | **************************************
[2025-04-19 11:07:41] 2025-04-19 15:07:26,684 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:07:41] 2025-04-19 15:07:26,684 | INFO     | **************************************
[2025-04-19 11:07:41] 2025-04-19 15:07:26,684 | INFO     | 
[2025-04-19 11:07:41] 2025-04-19 15:07:26,703 | INFO     | architecture information:
[2025-04-19 11:07:41] 2025-04-19 15:07:26,703 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:07:41] 2025-04-19 15:07:26,759 | INFO     | cat /etc/os-release:
[2025-04-19 11:07:41] NAME="CentOS Linux"
[2025-04-19 11:07:41] VERSION="7 (Core)"
[2025-04-19 11:07:41] ID="centos"
[2025-04-19 11:07:41] ID_LIKE="rhel fedora"
[2025-04-19 11:07:41] VERSION_ID="7"
[2025-04-19 11:07:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:07:41] ANSI_COLOR="0;31"
[2025-04-19 11:07:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:07:41] HOME_URL="https://www.centos.org/"
[2025-04-19 11:07:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:07:41] 
[2025-04-19 11:07:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:07:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:07:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:07:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:07:41] 
[2025-04-19 11:07:41] 2025-04-19 15:07:26,759 | INFO     | **************************************
[2025-04-19 11:07:41] 2025-04-19 15:07:27,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 11:07:41] 2025-04-19 15:07:27,395 | INFO     | sufficient remaining disk space (75849793536 B)
[2025-04-19 11:07:41] 2025-04-19 15:07:27,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:07:41] 2025-04-19 15:07:27,406 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:07:41] 2025-04-19 15:07:27,406 | INFO     | update_server=False
[2025-04-19 11:07:41] 2025-04-19 15:07:27,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:07:41] 2025-04-19 15:07:27,430 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 11:07:41] 2025-04-19 15:07:27,430 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:07:41] 2025-04-19 15:07:27,430 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:07:41] 2025-04-19 15:07:27,430 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:07:41] 2025-04-19 15:07:27,524 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 11:07:41] 2025-04-19 15:07:27,524 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 11:07:41] 2025-04-19 15:07:27,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:07:41] 2025-04-19 15:07:27,524 | INFO     | will abort loop
[2025-04-19 11:07:41] 2025-04-19 15:07:27,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:07:41] 2025-04-19 15:07:28,046 | INFO     | all data control threads have been joined
[2025-04-19 11:07:41] 2025-04-19 15:07:28,230 | INFO     | all job control threads have been joined
[2025-04-19 11:07:41] 2025-04-19 15:07:28,266 | INFO     | all payload control threads have been joined
[2025-04-19 11:07:41] 2025-04-19 15:07:28,413 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:28,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:28,530 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:28,560 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:28,922 | INFO     | [job] validate thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,065 | INFO     | [data] control thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,236 | INFO     | [job] control thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,272 | INFO     | [payload] control thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,497 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,621 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,686 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:07:41] 2025-04-19 15:07:29,746 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,818 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:29,970 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:30,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:07:41] 2025-04-19 15:07:30,717 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:34,555 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:07:41] 2025-04-19 15:07:35,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140367648601920)>', '<ExcThread(monitor, started 140366711879424)>']
[2025-04-19 11:07:41] 2025-04-19 15:07:35,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:07:41] 2025-04-19 15:07:35,489 | INFO     | [monitor] control thread has ended
[2025-04-19 11:07:41] 2025-04-19 15:07:40,347 | INFO     | all workflow threads have been joined
[2025-04-19 11:07:41] 2025-04-19 15:07:40,347 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:07:41] 2025-04-19 15:07:40,347 | INFO     | traces error code: 0
[2025-04-19 11:07:41] 2025-04-19 15:07:40,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:07:41] 2025-04-19 15:07:40,874 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:07:41] 2025-04-19 15:07:40,878 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:07:41] 2025-04-19 15:07:40,881 [wrapper] pilotpid: 3322700
[2025-04-19 11:07:41] 2025-04-19 15:07:40,884 [wrapper] Pilot exit status: 0
[2025-04-19 11:07:41] 2025-04-19 15:07:40,901 [wrapper] pandaids: 6607299384
[2025-04-19 11:07:41] 2025-04-19 15:07:40,985 [wrapper] cleanup supervisor_pilot 1173394 3322701
[2025-04-19 11:07:41] 2025-04-19 15:07:40,988 [wrapper] Test setup, not cleaning
[2025-04-19 11:07:41] 2025-04-19 15:07:40,990 [wrapper] apfmon messages muted
[2025-04-19 11:07:41] 2025-04-19 15:07:40,993 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:07:41] 2025-04-19 15:07:40,996 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:07:41]  *** Error codes and diagnostics ***
[2025-04-19 11:07:41]     "exeErrorCode": 0,
[2025-04-19 11:07:41]     "exeErrorDiag": "",
[2025-04-19 11:07:41]     "pilotErrorCode": 0,
[2025-04-19 11:07:41]     "pilotErrorDiag": "",
[2025-04-19 11:07:41]  *** Listing of results directory ***
[2025-04-19 11:07:41] total 424240
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas    495897 Apr 19 00:54 pilot3.tar.gz
[2025-04-19 11:07:41] -rwx------. 1 boincer umatlas     37140 Apr 19 01:07 runpilot2-wrapper.sh
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas      5111 Apr 19 01:07 queuedata.json
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas       100 Apr 19 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:07:41] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 19 03:55 run_atlas
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas       105 Apr 19 03:55 job.xml
[2025-04-19 11:07:41] -rw-r--r--. 2 boincer umatlas 224718285 Apr 19 03:55 EVNT.44075481._003030.pool.root.1
[2025-04-19 11:07:41] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 03:55 start_atlas.sh
[2025-04-19 11:07:41] drwxrwx--x. 2 boincer umatlas      4096 Apr 19 03:55 shared
[2025-04-19 11:07:41] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 03:55 input.tar.gz
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas         0 Apr 19 03:55 boinc_lockfile
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas      2579 Apr 19 03:55 pandaJob.out
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas       467 Apr 19 03:55 setup.sh.local
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas    991300 Apr 19 03:56 agis_schedconf.cvmfs.json
[2025-04-19 11:07:41] drwx------. 4 boincer umatlas      4096 Apr 19 03:56 pilot3
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas      6673 Apr 19 11:00 init_data.xml
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas 201139650 Apr 19 11:05 HITS.44075483._078069.pool.root.1
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas       531 Apr 19 11:05 boinc_task_state.xml
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas        95 Apr 19 11:06 pilot_heartbeat.json
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas      1037 Apr 19 11:06 memory_monitor_summary.json
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas   1618536 Apr 19 11:06 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas    509560 Apr 19 11:06 log.44075483._078069.job.log.tgz.1
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas      7708 Apr 19 11:07 heartbeat.json
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas      8192 Apr 19 11:07 boinc_mmap_file
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas        28 Apr 19 11:07 wrapper_checkpoint.txt
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas      4662 Apr 19 11:07 pilotlog.txt
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas   1835224 Apr 19 11:07 log.44075483._078069.job.log.1
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas       357 Apr 19 11:07 output.list
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas       620 Apr 19 11:07 runtime_log
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas   2365440 Apr 19 11:07 result.tar.gz
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas     11406 Apr 19 11:07 runtime_log.err
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas       654 Apr 19 11:07 CNMLDmWbFQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmz2gLDmZuKvKm.diag
[2025-04-19 11:07:41] -rw-r--r--. 1 boincer umatlas     20949 Apr 19 11:07 stderr.txt
[2025-04-19 11:07:41] HITS file was successfully produced:
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas 201139650 Apr 19 11:05 shared/HITS.pool.root.1
[2025-04-19 11:07:41]  *** Contents of shared directory: ***
[2025-04-19 11:07:41] total 418720
[2025-04-19 11:07:41] -rw-r--r--. 2 boincer umatlas 224718285 Apr 19 03:55 ATLAS.root_0
[2025-04-19 11:07:41] -rw-r--r--. 2 boincer umatlas     17569 Apr 19 03:55 start_atlas.sh
[2025-04-19 11:07:41] -rw-r--r--. 2 boincer umatlas    508887 Apr 19 03:55 input.tar.gz
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas 201139650 Apr 19 11:05 HITS.pool.root.1
[2025-04-19 11:07:41] -rw-------. 1 boincer umatlas   2365440 Apr 19 11:07 result.tar.gz
11:07:42 (3315543): run_atlas exited; CPU time 51318.858075
11:07:42 (3315543): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN