Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:34:39 (65976): wrapper (7.7.26015): starting
09:34:39 (65976): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 09:34:39] Arguments: --nthreads 8
[2025-04-19 09:34:39] Threads: 8
[2025-04-19 09:34:39] Checking for CVMFS
[2025-04-19 09:34:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 09:34:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 09:34:40] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 09:34:40] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/ligo.storage.igwn.org: Permission denied
[2025-04-19 09:34:40] 
[2025-04-19 09:34:40] CVMFS is ok
[2025-04-19 09:34:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 09:34:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 09:34:40] Further information can be found at the LHC@home message board.
[2025-04-19 09:34:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 09:34:40] Checking for apptainer binary...
[2025-04-19 09:34:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 09:34:40] Running /usr/bin/apptainer --version
[2025-04-19 09:34:40] apptainer version 1.3.2-1.el7
[2025-04-19 09:34:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 09:34:44] c-212-19.aglt2.org
[2025-04-19 09:34:44] apptainer works
[2025-04-19 09:34:44] Set ATHENA_PROC_NUMBER=8
[2025-04-19 09:34:44] Set ATHENA_CORE_NUMBER=8
[2025-04-19 09:34:44] Starting ATLAS job with PandaID=6607299204
[2025-04-19 09:34:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:01:56]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:01:56]  protocol_id=None
[2025-04-19 11:01:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 11:01:56]  replicas=None
[2025-04-19 11:01:56]  scope=mc23_13p6TeV
[2025-04-19 11:01:56]  status=None
[2025-04-19 11:01:56]  status_code=0
[2025-04-19 11:01:56]  storage_token=
[2025-04-19 11:01:56]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6607299204/log.44075483._077889.job.log.tgz.1
[2025-04-19 11:01:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/6c/log.44075483._077889.job.log.tgz.1
[2025-04-19 11:01:56]  workdir=None
[2025-04-19 11:01:56] ]
[2025-04-19 11:01:56] 2025-04-19 15:01:32,725 | INFO     | transferring file log.44075483._077889.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6607299204/log.44075483._077889.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 11:01:56] 2025-04-19 15:01:32,726 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6607299204/log.44075483._077889.job.log.tgz.1 /tmp/boinchome/slots/4/log.44075483._077889.job
[2025-04-19 11:01:56] 2025-04-19 15:01:32,787 | INFO     | adding to output.list: log.44075483._077889.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/6c/log.44075483._077889.job.log.tg
[2025-04-19 11:01:56] 2025-04-19 15:01:32,788 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 11:01:56] 2025-04-19 15:01:32,788 | INFO     | summary of transferred files:
[2025-04-19 11:01:56] 2025-04-19 15:01:32,788 | INFO     |  -- lfn=log.44075483._077889.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 11:01:56] 2025-04-19 15:01:32,788 | INFO     | stage-out finished correctly
[2025-04-19 11:01:56] 2025-04-19 15:01:32,857 | INFO     | number of running child processes to parent process 88238: 1
[2025-04-19 11:01:56] 2025-04-19 15:01:32,857 | INFO     | maximum number of monitored processes: 6
[2025-04-19 11:01:56] 2025-04-19 15:01:34,649 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 11:01:56] 2025-04-19 15:01:34,734 | INFO     | job 6607299204 has state=finished
[2025-04-19 11:01:56] 2025-04-19 15:01:34,734 | INFO     | preparing for final server update for job 6607299204 in state='finished'
[2025-04-19 11:01:56] 2025-04-19 15:01:34,735 | INFO     | this job has now completed (state=finished)
[2025-04-19 11:01:56] 2025-04-19 15:01:34,735 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 11:01:56] 2025-04-19 15:01:34,735 | INFO     | log transfer has been attempted: DONE
[2025-04-19 11:01:56] 2025-04-19 15:01:34,735 | INFO     | job 6607299204 has finished - writing final server update
[2025-04-19 11:01:56] 2025-04-19 15:01:34,735 | INFO     | total number of processed events: 400 (read)
[2025-04-19 11:01:56] 2025-04-19 15:01:34,740 | INFO     | executing command: lscpu
[2025-04-19 11:01:56] 2025-04-19 15:01:34,801 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 11:01:56] 2025-04-19 15:01:35,360 | INFO     | monitor loop #379: job 0:6607299204 is in state 'finished'
[2025-04-19 11:01:56] 2025-04-19 15:01:35,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:01:56] 2025-04-19 15:01:36,900 | INFO     | PID=10039 has CPU usage=12.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-19 11:01:56] 2025-04-19 15:01:36,900 | INFO     | .. there are 43 such processes running
[2025-04-19 11:01:56] 2025-04-19 15:01:37,864 | INFO     | monitor loop #380: job 0:6607299204 is in state 'finished'
[2025-04-19 11:01:56] 2025-04-19 15:01:37,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:01:56] 2025-04-19 15:01:40,367 | INFO     | monitor loop #381: job 0:6607299204 is in state 'finished'
[2025-04-19 11:01:56] 2025-04-19 15:01:40,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:01:56] 2025-04-19 15:01:42,668 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-19 11:01:56] 2025-04-19 15:01:42,668 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6607299204/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 11:01:56] 2025-04-19 15:01:42,669 | INFO     | extracted standard info from prmon json
[2025-04-19 11:01:56] 2025-04-19 15:01:42,669 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 11:01:56] 2025-04-19 15:01:42,669 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 11:01:56] 2025-04-19 15:01:42,670 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 11:01:56] 2025-04-19 15:01:42,670 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 11:01:56] 2025-04-19 15:01:42,671 | INFO     | fitting pss+swap vs Time
[2025-04-19 11:01:56] 2025-04-19 15:01:42,671 | INFO     | sum of square deviations: 147126479.5
[2025-04-19 11:01:56] 2025-04-19 15:01:42,672 | INFO     | sum of deviations: 17729689894.0
[2025-04-19 11:01:56] 2025-04-19 15:01:42,672 | INFO     | mean x: 1745072389.5
[2025-04-19 11:01:56] 2025-04-19 15:01:42,672 | INFO     | mean y: 2402712.6666666665
[2025-04-19 11:01:56] 2025-04-19 15:01:42,672 | INFO     | -- intersect: -210290077699.85202
[2025-04-19 11:01:56] 2025-04-19 15:01:42,672 | INFO     | intersect: -210290077699.85202
[2025-04-19 11:01:56] 2025-04-19 15:01:42,672 | INFO     | chi2: 1.8743872734131002
[2025-04-19 11:01:56] 2025-04-19 15:01:42,672 | INFO     | -- intersect: -210290077699.85202
[2025-04-19 11:01:56] 2025-04-19 15:01:42,672 | INFO     | current memory leak: 120.51 B/s (using 78 data points, chi2=1.87)
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | ..............................
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | . Timing measurements:
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | . get job = 0 s
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | . initial setup = 2 s
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | . payload setup = 9 s
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | . stage-in = 0 s
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | . payload execution = 5160 s
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | . stage-out = 1 s
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | . log creation = 0 s
[2025-04-19 11:01:56] 2025-04-19 15:01:42,673 | INFO     | ..............................
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | 
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | job summary report
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | --------------------------------------------------
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | PanDA job id: 6607299204
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | task id: 44075483
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | errors: (none)
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | pilot state: finished 
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | transexitcode: 0
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | exeerrorcode: 0
[2025-04-19 11:01:56] 2025-04-19 15:01:43,055 | INFO     | exeerrordiag: 
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | exitcode: 0
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | exitmsg: OK
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | cpuconsumptiontime: 31623 s
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | nevents: 400
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | neventsw: 0
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | pid: 88238
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | pgrp: 88238
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | corecount: 8
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | event service: False
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | sizes: {0: 2426824, 6: 2427030, 11: 2427058, 5173: 2453221, 5175: 2462162, 5177: 2462218, 5185: 2462516}
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | --------------------------------------------------
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | 
[2025-04-19 11:01:56] 2025-04-19 15:01:43,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-04-19 11:01:56] 2025-04-19 15:01:43,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | job 6607299204 has completed (purged errors)
[2025-04-19 11:01:56] 2025-04-19 15:01:43,094 | INFO     | overall cleanup function is called
[2025-04-19 11:01:56] 2025-04-19 15:01:44,102 | INFO     | --- collectZombieJob: --- 10, [88238]
[2025-04-19 11:01:56] 2025-04-19 15:01:44,102 | INFO     | zombie collector waiting for pid 88238
[2025-04-19 11:01:56] 2025-04-19 15:01:44,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:01:56] 2025-04-19 15:01:44,103 | INFO     | collected zombie processes
[2025-04-19 11:01:56] 2025-04-19 15:01:44,103 | INFO     | will attempt to kill all subprocesses of pid=88238
[2025-04-19 11:01:56] 2025-04-19 15:01:44,449 | INFO     | process IDs to be killed: [88238] (in reverse order)
[2025-04-19 11:01:56] 2025-04-19 15:01:44,627 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:01:56] 2025-04-19 15:01:44,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:01:56] 2025-04-19 15:01:44,653 | INFO     | did not find any defunct processes belonging to 88238
[2025-04-19 11:01:56] 2025-04-19 15:01:44,670 | INFO     | did not find any defunct processes belonging to 88238
[2025-04-19 11:01:56] 2025-04-19 15:01:44,670 | INFO     | ready for new job
[2025-04-19 11:01:56] 2025-04-19 15:01:44,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:01:56] 2025-04-19 15:01:44,672 | INFO     | **************************************
[2025-04-19 11:01:56] 2025-04-19 15:01:44,672 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:01:56] 2025-04-19 15:01:44,672 | INFO     | **************************************
[2025-04-19 11:01:56] 2025-04-19 15:01:44,672 | INFO     | 
[2025-04-19 11:01:56] 2025-04-19 15:01:44,677 | INFO     | architecture information:
[2025-04-19 11:01:56] 2025-04-19 15:01:44,680 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:01:56] 2025-04-19 15:01:44,705 | INFO     | cat /etc/os-release:
[2025-04-19 11:01:56] NAME="CentOS Linux"
[2025-04-19 11:01:56] VERSION="7 (Core)"
[2025-04-19 11:01:56] ID="centos"
[2025-04-19 11:01:56] ID_LIKE="rhel fedora"
[2025-04-19 11:01:56] VERSION_ID="7"
[2025-04-19 11:01:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:01:56] ANSI_COLOR="0;31"
[2025-04-19 11:01:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:01:56] HOME_URL="https://www.centos.org/"
[2025-04-19 11:01:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:01:56] 
[2025-04-19 11:01:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:01:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:01:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:01:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:01:56] 
[2025-04-19 11:01:56] 2025-04-19 15:01:44,705 | INFO     | **************************************
[2025-04-19 11:01:56] 2025-04-19 15:01:45,209 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-04-19 11:01:56] 2025-04-19 15:01:45,275 | INFO     | sufficient remaining disk space (84541440000 B)
[2025-04-19 11:01:56] 2025-04-19 15:01:45,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:01:56] 2025-04-19 15:01:45,275 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:01:56] 2025-04-19 15:01:45,276 | INFO     | update_server=False
[2025-04-19 11:01:56] 2025-04-19 15:01:45,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:01:56] 2025-04-19 15:01:45,276 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 11:01:56] 2025-04-19 15:01:45,276 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:01:56] 2025-04-19 15:01:45,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:01:56] 2025-04-19 15:01:45,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:01:56] 2025-04-19 15:01:45,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:01:56] 2025-04-19 15:01:45,378 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-19 11:01:56] 2025-04-19 15:01:45,378 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-19 11:01:56] 2025-04-19 15:01:45,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:01:56] 2025-04-19 15:01:45,378 | INFO     | will abort loop
[2025-04-19 11:01:56] 2025-04-19 15:01:45,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:01:56] 2025-04-19 15:01:46,094 | INFO     | all data control threads have been joined
[2025-04-19 11:01:56] 2025-04-19 15:01:46,229 | INFO     | all payload control threads have been joined
[2025-04-19 11:01:56] 2025-04-19 15:01:46,281 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:46,384 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:46,555 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:46,744 | INFO     | all job control threads have been joined
[2025-04-19 11:01:56] 2025-04-19 15:01:46,756 | INFO     | [job] validate thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:46,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:46,941 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:46,988 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:47,099 | INFO     | [data] control thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:47,237 | INFO     | [payload] control thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:47,440 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:47,656 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:47,735 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:47,750 | INFO     | [job] control thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:47,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:01:56] 2025-04-19 15:01:47,866 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:48,757 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:49,284 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:01:56] 2025-04-19 15:01:51,021 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961761683264)>', '<ExcThread(monitor, started 139961458202368)>']
[2025-04-19 11:01:56] 2025-04-19 15:01:51,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:01:56] 2025-04-19 15:01:51,307 | INFO     | [monitor] control thread has ended
[2025-04-19 11:01:56] 2025-04-19 15:01:56,046 | INFO     | all workflow threads have been joined
[2025-04-19 11:01:56] 2025-04-19 15:01:56,047 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:01:56] 2025-04-19 15:01:56,047 | INFO     | traces error code: 0
[2025-04-19 11:01:56] 2025-04-19 15:01:56,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:01:56] 2025-04-19 15:01:56,228 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:01:56] 2025-04-19 15:01:56,235 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:01:56] 2025-04-19 15:01:56,238 [wrapper] pilotpid: 10039
[2025-04-19 11:01:56] 2025-04-19 15:01:56,241 [wrapper] Pilot exit status: 0
[2025-04-19 11:01:56] 2025-04-19 15:01:56,292 [wrapper] pandaids: 6607299204
[2025-04-19 11:01:56] 2025-04-19 15:01:56,386 [wrapper] cleanup supervisor_pilot 35272 10041
[2025-04-19 11:01:56] 2025-04-19 15:01:56,388 [wrapper] Test setup, not cleaning
[2025-04-19 11:01:56] 2025-04-19 15:01:56,391 [wrapper] apfmon messages muted
[2025-04-19 11:01:56] 2025-04-19 15:01:56,407 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:01:56] 2025-04-19 15:01:56,409 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:01:56]  *** Error codes and diagnostics ***
[2025-04-19 11:01:56]     "exeErrorCode": 0,
[2025-04-19 11:01:56]     "exeErrorDiag": "",
[2025-04-19 11:01:56]     "pilotErrorCode": 0,
[2025-04-19 11:01:56]     "pilotErrorDiag": "",
[2025-04-19 11:01:56]  *** Listing of results directory ***
[2025-04-19 11:01:56] total 413432
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 00:38 pilot3.tar.gz
[2025-04-19 11:01:56] -rwx------ 1 boincer umatlas     37140 Apr 19 00:53 runpilot2-wrapper.sh
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 00:53 queuedata.json
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas       100 Apr 19 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:01:56] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 09:34 run_atlas
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas       105 Apr 19 09:34 job.xml
[2025-04-19 11:01:56] -rw-r--r-- 2 boincer umatlas 222227361 Apr 19 09:34 EVNT.44075481._003023.pool.root.1
[2025-04-19 11:01:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:34 start_atlas.sh
[2025-04-19 11:01:56] drwxrwx--x 2 boincer umatlas      4096 Apr 19 09:34 shared
[2025-04-19 11:01:56] -rw-r--r-- 2 boincer umatlas    508886 Apr 19 09:34 input.tar.gz
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas         0 Apr 19 09:34 boinc_lockfile
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 09:34 pandaJob.out
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas       424 Apr 19 09:34 setup.sh.local
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas    991292 Apr 19 09:34 agis_schedconf.cvmfs.json
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas   1618536 Apr 19 09:34 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:01:56] drwx------ 4 boincer umatlas      4096 Apr 19 09:35 pilot3
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas      6301 Apr 19 11:00 init_data.xml
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas        95 Apr 19 11:00 pilot_heartbeat.json
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas 195640714 Apr 19 11:01 HITS.44075483._077889.pool.root.1
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas       529 Apr 19 11:01 boinc_task_state.xml
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas      1074 Apr 19 11:01 memory_monitor_summary.json
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas    305725 Apr 19 11:01 log.44075483._077889.job.log.tgz.1
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas      7748 Apr 19 11:01 heartbeat.json
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 11:01 boinc_mmap_file
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas        27 Apr 19 11:01 wrapper_checkpoint.txt
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas      4662 Apr 19 11:01 pilotlog.txt
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas    504225 Apr 19 11:01 log.44075483._077889.job.log.1
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas       357 Apr 19 11:01 output.list
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas       620 Apr 19 11:01 runtime_log
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas    829440 Apr 19 11:01 result.tar.gz
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas       659 Apr 19 11:01 TcsLDmVNFQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmA1gLDm1S5NIn.diag
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas     11013 Apr 19 11:01 runtime_log.err
[2025-04-19 11:01:56] -rw-r--r-- 1 boincer umatlas     21493 Apr 19 11:01 stderr.txt
[2025-04-19 11:01:56] HITS file was successfully produced:
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas 195640714 Apr 19 11:01 shared/HITS.pool.root.1
[2025-04-19 11:01:56]  *** Contents of shared directory: ***
[2025-04-19 11:01:56] total 409412
[2025-04-19 11:01:56] -rw-r--r-- 2 boincer umatlas 222227361 Apr 19 09:34 ATLAS.root_0
[2025-04-19 11:01:56] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 09:34 start_atlas.sh
[2025-04-19 11:01:56] -rw-r--r-- 2 boincer umatlas    508886 Apr 19 09:34 input.tar.gz
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas 195640714 Apr 19 11:01 HITS.pool.root.1
[2025-04-19 11:01:56] -rw------- 1 boincer umatlas    829440 Apr 19 11:01 result.tar.gz
11:01:58 (65976): run_atlas exited; CPU time 31523.691816
11:01:58 (65976): called boinc_finish(0)

</stderr_txt>
]]>

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