Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:10:57 (285650): wrapper (7.7.26015): starting
03:10:57 (285650): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 03:10:57] Arguments: --nthreads 8
[2025-04-19 03:10:57] Threads: 8
[2025-04-19 03:10:57] Checking for CVMFS
[2025-04-19 03:10:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 03:10:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 03:10:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 03:11:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 03:11:00] 2.11.2.0 146663 42122 155928 145029 1 468 14641973 18432000 26093 130560 0 184904581 98.742 479704044 41223 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 03:11:00] CVMFS is ok
[2025-04-19 03:11:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 03:11:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 03:11:00] Further information can be found at the LHC@home message board.
[2025-04-19 03:11:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 03:11:00] Checking for apptainer binary...
[2025-04-19 03:11:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 03:11:00] Running /usr/bin/apptainer --version
[2025-04-19 03:11:00] apptainer version 1.3.2-1.el7
[2025-04-19 03:11:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 03:11:21] c-211-33-1.aglt2.org
[2025-04-19 03:11:21] apptainer works
[2025-04-19 03:11:21] Set ATHENA_PROC_NUMBER=8
[2025-04-19 03:11:21] Set ATHENA_CORE_NUMBER=8
[2025-04-19 03:11:21] Starting ATLAS job with PandaID=6607298585
[2025-04-19 03:11:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:20:06 (285650): BOINC client no longer exists - exiting
04:20:06 (285650): timer handler: client dead, exiting
04:29:31 (250601): wrapper (7.7.26015): starting
04:29:31 (250601): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 04:29:32] Arguments: --nthreads 8
[2025-04-19 04:29:32] Threads: 8
[2025-04-19 04:29:32] This job has been restarted, cleaning up previous attempt
[2025-04-19 04:29:32] Checking for CVMFS
[2025-04-19 04:29:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 04:29:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 04:29:33] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 04:29:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 04:29:35] 2.11.2.0 146663 42201 164924 145031 3 357 17077365 18432001 21244 130560 0 185829287 98.735 483742432 41212 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-19 04:29:35] CVMFS is ok
[2025-04-19 04:29:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 04:29:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 04:29:35] Further information can be found at the LHC@home message board.
[2025-04-19 04:29:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 04:29:35] Checking for apptainer binary...
[2025-04-19 04:29:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 04:29:35] Running /usr/bin/apptainer --version
[2025-04-19 04:29:35] apptainer version 1.3.2-1.el7
[2025-04-19 04:29:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 04:29:38] c-211-33-1.aglt2.org
[2025-04-19 04:29:38] apptainer works
[2025-04-19 04:29:38] Set ATHENA_PROC_NUMBER=8
[2025-04-19 04:29:38] Set ATHENA_CORE_NUMBER=8
[2025-04-19 04:29:38] Starting ATLAS job with PandaID=6607298585
[2025-04-19 04:29:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:10:26 (243610): wrapper (7.7.26015): starting
05:10:26 (243610): wrapper: running run_atlas (--nthreads 8)
[2025-04-19 05:10:26] Arguments: --nthreads 8
[2025-04-19 05:10:26] Threads: 8
[2025-04-19 05:10:26] This job has been restarted, cleaning up previous attempt
[2025-04-19 05:10:26] Checking for CVMFS
[2025-04-19 05:10:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 05:10:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 05:10:27] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 05:10:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 05:10:28] 2.11.2.0 146663 42242 179212 145031 2 715 12984590 18432000 21515 130560 0 186329914 98.735 485326206 41206 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 05:10:28] CVMFS is ok
[2025-04-19 05:10:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 05:10:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 05:10:28] Further information can be found at the LHC@home message board.
[2025-04-19 05:10:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 05:10:28] Checking for apptainer binary...
[2025-04-19 05:10:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 05:10:28] Running /usr/bin/apptainer --version
[2025-04-19 05:10:28] apptainer version 1.3.2-1.el7
[2025-04-19 05:10:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 05:10:31] c-211-33-1.aglt2.org
[2025-04-19 05:10:31] apptainer works
[2025-04-19 05:10:31] Set ATHENA_PROC_NUMBER=8
[2025-04-19 05:10:31] Set ATHENA_CORE_NUMBER=8
[2025-04-19 05:10:31] Starting ATLAS job with PandaID=6607298585
[2025-04-19 05:10:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:31:30]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:31:30] 2025-04-19 15:31:13,972 | INFO     | mean y: 2404250.128686327
[2025-04-19 11:31:30] 2025-04-19 15:31:13,972 | INFO     | -- intersect: -31429026580.85622
[2025-04-19 11:31:30] 2025-04-19 15:31:13,972 | INFO     | intersect: -31429026580.85622
[2025-04-19 11:31:30] 2025-04-19 15:31:13,972 | INFO     | chi2: 7.810884947407517
[2025-04-19 11:31:30] 2025-04-19 15:31:13,973 | INFO     | sum of square deviations: 15453123961.301683
[2025-04-19 11:31:30] 2025-04-19 15:31:13,976 | INFO     | sum of deviations: 310309581830.8397
[2025-04-19 11:31:30] 2025-04-19 15:31:13,976 | INFO     | mean x: 1745065148.8070652
[2025-04-19 11:31:30] 2025-04-19 15:31:13,976 | INFO     | mean y: 2409074.1385869565
[2025-04-19 11:31:30] 2025-04-19 15:31:13,976 | INFO     | -- intersect: -35039724668.52497
[2025-04-19 11:31:30] 2025-04-19 15:31:13,977 | INFO     | intersect: -35039724668.52497
[2025-04-19 11:31:30] 2025-04-19 15:31:13,977 | INFO     | chi2: 7.0108722994091
[2025-04-19 11:31:30] 2025-04-19 15:31:13,977 | INFO     | current chi2=7.0108722994091 (change=10.242279247295095 %)
[2025-04-19 11:31:30] 2025-04-19 15:31:13,977 | INFO     | right removable region: 367
[2025-04-19 11:31:30] 2025-04-19 15:31:13,978 | INFO     | sum of square deviations: 15453055031.301687
[2025-04-19 11:31:30] 2025-04-19 15:31:13,982 | INFO     | sum of deviations: 180001656551.30722
[2025-04-19 11:31:30] 2025-04-19 15:31:13,982 | INFO     | mean x: 1745065453.8070652
[2025-04-19 11:31:30] 2025-04-19 15:31:13,982 | INFO     | mean y: 2430453.497282609
[2025-04-19 11:31:30] 2025-04-19 15:31:13,982 | INFO     | -- intersect: -20324596910.312668
[2025-04-19 11:31:30] 2025-04-19 15:31:13,982 | INFO     | intersect: -20324596910.312668
[2025-04-19 11:31:30] 2025-04-19 15:31:13,983 | INFO     | chi2: 4.2851799257652665
[2025-04-19 11:31:30] 2025-04-19 15:31:13,983 | INFO     | current chi2=4.2851799257652665 (change=45.13835558175075 %)
[2025-04-19 11:31:30] 2025-04-19 15:31:13,983 | INFO     | sum of square deviations: 14831650775.823706
[2025-04-19 11:31:30] 2025-04-19 15:31:13,987 | INFO     | sum of deviations: 98409827869.79347
[2025-04-19 11:31:30] 2025-04-19 15:31:13,991 | INFO     | mean x: 1745065606.3112948
[2025-04-19 11:31:30] 2025-04-19 15:31:13,991 | INFO     | mean y: 2450473.0991735538
[2025-04-19 11:31:30] 2025-04-19 15:31:13,991 | INFO     | -- intersect: -11576274547.754335
[2025-04-19 11:31:30] 2025-04-19 15:31:13,991 | INFO     | intersect: -11576274547.754335
[2025-04-19 11:31:30] 2025-04-19 15:31:13,992 | INFO     | chi2: 2.4734676441469796
[2025-04-19 11:31:30] 2025-04-19 15:31:13,992 | INFO     | current chi2=2.4734676441469796 (change=42.27855803031989 %)
[2025-04-19 11:31:30] 2025-04-19 15:31:13,992 | INFO     | sum of square deviations: 14227130557.832407
[2025-04-19 11:31:30] 2025-04-19 15:31:13,996 | INFO     | sum of deviations: 27511231349.569828
[2025-04-19 11:31:30] 2025-04-19 15:31:13,996 | INFO     | mean x: 1745065758.8156424
[2025-04-19 11:31:30] 2025-04-19 15:31:13,997 | INFO     | mean y: 2468338.3268156424
[2025-04-19 11:31:30] 2025-04-19 15:31:13,997 | INFO     | -- intersect: -3371993406.84636
[2025-04-19 11:31:30] 2025-04-19 15:31:13,997 | INFO     | intersect: -3371993406.84636
[2025-04-19 11:31:30] 2025-04-19 15:31:13,997 | INFO     | chi2: 1.0610999833297745
[2025-04-19 11:31:30] 2025-04-19 15:31:13,997 | INFO     | current chi2=1.0610999833297745 (change=57.10071300747844 %)
[2025-04-19 11:31:30] 2025-04-19 15:31:14,001 | INFO     | sum of square deviations: 13639261814.827183
[2025-04-19 11:31:30] 2025-04-19 15:31:14,004 | INFO     | sum of deviations: 2036250894.991497
[2025-04-19 11:31:30] 2025-04-19 15:31:14,012 | INFO     | mean x: 1745065911.3201134
[2025-04-19 11:31:30] 2025-04-19 15:31:14,012 | INFO     | mean y: 2474932.212464589
[2025-04-19 11:31:30] 2025-04-19 15:31:14,012 | INFO     | -- intersect: -258051778.98255447
[2025-04-19 11:31:30] 2025-04-19 15:31:14,012 | INFO     | intersect: -258051778.98255447
[2025-04-19 11:31:30] 2025-04-19 15:31:14,013 | INFO     | chi2: 0.8782459010496878
[2025-04-19 11:31:30] 2025-04-19 15:31:14,014 | INFO     | current chi2=0.8782459010496878 (change=17.232502606048794 %)
[2025-04-19 11:31:30] 2025-04-19 15:31:14,014 | INFO     | left removable region: 40
[2025-04-19 11:31:30] 2025-04-19 15:31:14,014 | INFO     | sum of square deviations: 10842000657.639137
[2025-04-19 11:31:30] 2025-04-19 15:31:14,017 | INFO     | sum of deviations: 12691563717.17736
[2025-04-19 11:31:30] 2025-04-19 15:31:14,017 | INFO     | mean x: 1745066338.324159
[2025-04-19 11:31:30] 2025-04-19 15:31:14,017 | INFO     | mean y: 2484405.281345566
[2025-04-19 11:31:30] 2025-04-19 15:31:14,017 | INFO     | -- intersect: -2040277011.4445899
[2025-04-19 11:31:30] 2025-04-19 15:31:14,017 | INFO     | intersect: -2040277011.4445899
[2025-04-19 11:31:30] 2025-04-19 15:31:14,018 | INFO     | chi2: 0.0021852639788326493
[2025-04-19 11:31:30] 2025-04-19 15:31:14,018 | INFO     | -- intersect: -2040277011.4445899
[2025-04-19 11:31:30] 2025-04-19 15:31:14,018 | INFO     | current memory leak: 1.17 B/s (using 327 data points, chi2=0.00)
[2025-04-19 11:31:30] 2025-04-19 15:31:14,019 | INFO     | ..............................
[2025-04-19 11:31:30] 2025-04-19 15:31:14,019 | INFO     | . Timing measurements:
[2025-04-19 11:31:30] 2025-04-19 15:31:14,019 | INFO     | . get job = 0 s
[2025-04-19 11:31:30] 2025-04-19 15:31:14,019 | INFO     | . initial setup = 2 s
[2025-04-19 11:31:30] 2025-04-19 15:31:14,019 | INFO     | . payload setup = 28 s
[2025-04-19 11:31:30] 2025-04-19 15:31:14,019 | INFO     | . stage-in = 0 s
[2025-04-19 11:31:30] 2025-04-19 15:31:14,019 | INFO     | . payload execution = 22729 s
[2025-04-19 11:31:30] 2025-04-19 15:31:14,019 | INFO     | . stage-out = 2 s
[2025-04-19 11:31:30] 2025-04-19 15:31:14,020 | INFO     | . log creation = 0 s
[2025-04-19 11:31:30] 2025-04-19 15:31:14,020 | INFO     | ..............................
[2025-04-19 11:31:30] 2025-04-19 15:31:14,216 | INFO     | 
[2025-04-19 11:31:30] 2025-04-19 15:31:14,216 | INFO     | job summary report
[2025-04-19 11:31:30] 2025-04-19 15:31:14,217 | INFO     | --------------------------------------------------
[2025-04-19 11:31:30] 2025-04-19 15:31:14,217 | INFO     | PanDA job id: 6607298585
[2025-04-19 11:31:30] 2025-04-19 15:31:14,217 | INFO     | task id: 44075483
[2025-04-19 11:31:30] 2025-04-19 15:31:14,219 | INFO     | errors: (none)
[2025-04-19 11:31:30] 2025-04-19 15:31:14,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:31:30] 2025-04-19 15:31:14,219 | INFO     | pilot state: finished 
[2025-04-19 11:31:30] 2025-04-19 15:31:14,219 | INFO     | transexitcode: 0
[2025-04-19 11:31:30] 2025-04-19 15:31:14,219 | INFO     | exeerrorcode: 0
[2025-04-19 11:31:30] 2025-04-19 15:31:14,219 | INFO     | exeerrordiag: 
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | exitcode: 0
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | exitmsg: OK
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | cpuconsumptiontime: 47846 s
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | nevents: 400
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | neventsw: 0
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | pid: 311747
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | pgrp: 311747
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | corecount: 8
[2025-04-19 11:31:30] 2025-04-19 15:31:14,220 | INFO     | event service: False
[2025-04-19 11:31:30] 2025-04-19 15:31:14,221 | INFO     | sizes: {0: 2425996, 1: 2426852, 2: 2426880, 12: 2426880, 15: 2427114, 23: 2427142, 22760: 2461225, 22761: 2461224, 22763: 2470277, 22774: 2470391}
[2025-04-19 11:31:30] 2025-04-19 15:31:14,221 | INFO     | --------------------------------------------------
[2025-04-19 11:31:30] 2025-04-19 15:31:14,221 | INFO     | 
[2025-04-19 11:31:30] 2025-04-19 15:31:14,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-19 11:31:30] 2025-04-19 15:31:14,402 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:31:30] 2025-04-19 15:31:14,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,404 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:31:30] 2025-04-19 15:31:14,404 | INFO     | job 6607298585 has completed (purged errors)
[2025-04-19 11:31:30] 2025-04-19 15:31:14,425 | INFO     | overall cleanup function is called
[2025-04-19 11:31:30] 2025-04-19 15:31:14,891 | INFO     | PID=272429 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 11:31:30] 2025-04-19 15:31:14,892 | INFO     | .. there are 35 such processes running
[2025-04-19 11:31:30] 2025-04-19 15:31:15,462 | INFO     | --- collectZombieJob: --- 10, [311747]
[2025-04-19 11:31:30] 2025-04-19 15:31:15,462 | INFO     | zombie collector waiting for pid 311747
[2025-04-19 11:31:30] 2025-04-19 15:31:15,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:31:30] 2025-04-19 15:31:15,462 | INFO     | collected zombie processes
[2025-04-19 11:31:30] 2025-04-19 15:31:15,462 | INFO     | will attempt to kill all subprocesses of pid=311747
[2025-04-19 11:31:30] 2025-04-19 15:31:15,939 | INFO     | process IDs to be killed: [311747] (in reverse order)
[2025-04-19 11:31:30] 2025-04-19 15:31:16,443 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:31:30] 2025-04-19 15:31:16,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:31:30] 2025-04-19 15:31:16,458 | INFO     | did not find any defunct processes belonging to 311747
[2025-04-19 11:31:30] 2025-04-19 15:31:16,473 | INFO     | did not find any defunct processes belonging to 311747
[2025-04-19 11:31:30] 2025-04-19 15:31:16,473 | INFO     | ready for new job
[2025-04-19 11:31:30] 2025-04-19 15:31:16,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:31:30] 2025-04-19 15:31:16,475 | INFO     | **************************************
[2025-04-19 11:31:30] 2025-04-19 15:31:16,476 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:31:30] 2025-04-19 15:31:16,476 | INFO     | **************************************
[2025-04-19 11:31:30] 2025-04-19 15:31:16,476 | INFO     | 
[2025-04-19 11:31:30] 2025-04-19 15:31:16,480 | INFO     | architecture information:
[2025-04-19 11:31:30] 2025-04-19 15:31:16,481 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:31:30] 2025-04-19 15:31:16,506 | INFO     | cat /etc/os-release:
[2025-04-19 11:31:30] NAME="CentOS Linux"
[2025-04-19 11:31:30] VERSION="7 (Core)"
[2025-04-19 11:31:30] ID="centos"
[2025-04-19 11:31:30] ID_LIKE="rhel fedora"
[2025-04-19 11:31:30] VERSION_ID="7"
[2025-04-19 11:31:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:31:30] ANSI_COLOR="0;31"
[2025-04-19 11:31:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:31:30] HOME_URL="https://www.centos.org/"
[2025-04-19 11:31:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:31:30] 
[2025-04-19 11:31:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:31:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:31:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:31:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:31:30] 
[2025-04-19 11:31:30] 2025-04-19 15:31:16,507 | INFO     | **************************************
[2025-04-19 11:31:30] 2025-04-19 15:31:17,010 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-19 11:31:30] 2025-04-19 15:31:17,035 | INFO     | sufficient remaining disk space (103494451200 B)
[2025-04-19 11:31:30] 2025-04-19 15:31:17,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:31:30] 2025-04-19 15:31:17,036 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:31:30] 2025-04-19 15:31:17,036 | INFO     | update_server=False
[2025-04-19 11:31:30] 2025-04-19 15:31:17,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:31:30] 2025-04-19 15:31:17,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:31:30] 2025-04-19 15:31:17,037 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 11:31:30] 2025-04-19 15:31:17,037 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:31:30] 2025-04-19 15:31:17,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:31:30] 2025-04-19 15:31:17,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:31:30] 2025-04-19 15:31:17,184 | INFO     | all data control threads have been joined
[2025-04-19 11:31:30] 2025-04-19 15:31:17,396 | INFO     | all job control threads have been joined
[2025-04-19 11:31:30] 2025-04-19 15:31:17,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:31:30] 2025-04-19 15:31:17,579 | INFO     | aborting loop
[2025-04-19 11:31:30] 2025-04-19 15:31:17,649 | INFO     | all payload control threads have been joined
[2025-04-19 11:31:30] 2025-04-19 15:31:18,042 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,191 | INFO     | [data] control thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,235 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,331 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,402 | INFO     | [job] control thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,440 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,441 | INFO     | [job] validate thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,585 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,656 | INFO     | [payload] control thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,675 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:18,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:31:30] 2025-04-19 15:31:18,993 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:19,043 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:19,085 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:19,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:31:30] 2025-04-19 15:31:20,238 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:22,992 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:31:30] 2025-04-19 15:31:24,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072229074752)>', '<ExcThread(monitor, started 140071919392512)>']
[2025-04-19 11:31:30] 2025-04-19 15:31:25,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:31:30] 2025-04-19 15:31:25,084 | INFO     | [monitor] control thread has ended
[2025-04-19 11:31:30] 2025-04-19 15:31:29,372 | INFO     | all workflow threads have been joined
[2025-04-19 11:31:30] 2025-04-19 15:31:29,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:31:30] 2025-04-19 15:31:29,373 | INFO     | traces error code: 0
[2025-04-19 11:31:30] 2025-04-19 15:31:29,373 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:31:30] 2025-04-19 15:31:29,656 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:31:30] 2025-04-19 15:31:29,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:31:30] 2025-04-19 15:31:29,662 [wrapper] pilotpid: 272429
[2025-04-19 11:31:30] 2025-04-19 15:31:29,665 [wrapper] Pilot exit status: 0
[2025-04-19 11:31:30] 2025-04-19 15:31:29,715 [wrapper] pandaids: 6607298585 6607298585 6607298585
[2025-04-19 11:31:30] 2025-04-19 15:31:29,829 [wrapper] cleanup supervisor_pilot 228418 272430
[2025-04-19 11:31:30] 2025-04-19 15:31:29,838 [wrapper] Test setup, not cleaning
[2025-04-19 11:31:30] 2025-04-19 15:31:29,849 [wrapper] apfmon messages muted
[2025-04-19 11:31:30] 2025-04-19 15:31:29,857 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:31:30] 2025-04-19 15:31:29,870 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:31:30]  *** Error codes and diagnostics ***
[2025-04-19 11:31:30]     "exeErrorCode": 0,
[2025-04-19 11:31:30]     "exeErrorDiag": "",
[2025-04-19 11:31:30]     "pilotErrorCode": 0,
[2025-04-19 11:31:30]     "pilotErrorDiag": "",
[2025-04-19 11:31:30]  *** Listing of results directory ***
[2025-04-19 11:31:30] total 632048
[2025-04-19 11:31:30] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas    495897 Apr 19 00:12 pilot3.tar.gz
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas      5111 Apr 19 00:16 queuedata.json
[2025-04-19 11:31:30] -rwx------ 1 boincer umatlas     37140 Apr 19 00:16 runpilot2-wrapper.sh
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas       100 Apr 19 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:31:30] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 03:10 run_atlas
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas       105 Apr 19 03:10 job.xml
[2025-04-19 11:31:30] -rw-r--r-- 3 boincer umatlas 221623335 Apr 19 03:10 EVNT.44075481._003009.pool.root.1
[2025-04-19 11:31:30] -rw-r--r-- 3 boincer umatlas 221623335 Apr 19 03:10 ATLAS.root_0
[2025-04-19 11:31:30] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 03:10 start_atlas.sh
[2025-04-19 11:31:30] drwxrwx--x 2 boincer umatlas      4096 Apr 19 03:10 shared
[2025-04-19 11:31:30] -rw-r--r-- 2 boincer umatlas    508882 Apr 19 03:10 input.tar.gz
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas         0 Apr 19 03:10 boinc_lockfile
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 05:10 pandaJob.out
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas       467 Apr 19 05:10 setup.sh.local
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas    991300 Apr 19 05:10 agis_schedconf.cvmfs.json
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas      6386 Apr 19 11:29 init_data.xml
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas 195564345 Apr 19 11:30 HITS.44075483._077551.pool.root.1
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas       531 Apr 19 11:30 boinc_task_state.xml
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas      1058 Apr 19 11:30 memory_monitor_summary.json
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas   1618536 Apr 19 11:31 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas    475159 Apr 19 11:31 log.44075483._077551.job.log.tgz.1
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas        96 Apr 19 11:31 pilot_heartbeat.json
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas      7752 Apr 19 11:31 heartbeat.json
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas        28 Apr 19 11:31 wrapper_checkpoint.txt
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 11:31 boinc_mmap_file
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas      4477 Apr 19 11:31 pilotlog.txt
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas   1787086 Apr 19 11:31 log.44075483._077551.job.log.1
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas       357 Apr 19 11:31 output.list
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas       620 Apr 19 11:31 runtime_log
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas   2283520 Apr 19 11:31 result.tar.gz
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas     11514 Apr 19 11:31 runtime_log.err
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas       913 Apr 19 11:31 BMdLDmjnEQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmewgLDmtiSARn.diag
[2025-04-19 11:31:30] -rw-r--r-- 1 boincer umatlas     25456 Apr 19 11:31 stderr.txt
[2025-04-19 11:31:30] HITS file was successfully produced:
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas 195564345 Apr 19 11:30 shared/HITS.pool.root.1
[2025-04-19 11:31:30]  *** Contents of shared directory: ***
[2025-04-19 11:31:30] total 410172
[2025-04-19 11:31:30] -rw-r--r-- 3 boincer umatlas 221623335 Apr 19 03:10 ATLAS.root_0
[2025-04-19 11:31:30] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 03:10 start_atlas.sh
[2025-04-19 11:31:30] -rw-r--r-- 2 boincer umatlas    508882 Apr 19 03:10 input.tar.gz
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas 195564345 Apr 19 11:30 HITS.pool.root.1
[2025-04-19 11:31:30] -rw------- 1 boincer umatlas   2283520 Apr 19 11:31 result.tar.gz
11:31:32 (243610): run_atlas exited; CPU time 48851.410533
11:31:32 (243610): called boinc_finish(0)

</stderr_txt>
]]>

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