Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
10:53:56 (3082651): wrapper (7.7.26015): starting
10:53:56 (3082651): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 10:53:56] Arguments: --nthreads 12
[2025-04-19 10:53:56] Threads: 12
[2025-04-19 10:53:56] Checking for CVMFS
[2025-04-19 10:53:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 10:53:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 10:53:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 10:53:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 10:53:57] 2.9.2.0 3613 6365 80028 145031 2 65 6401702 36864001 0 130560 0 7964698 99.862 2623726 5855 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-19 10:53:57] CVMFS is ok
[2025-04-19 10:53:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 10:53:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 10:53:57] Further information can be found at the LHC@home message board.
[2025-04-19 10:53:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 10:53:57] Checking for apptainer binary...
[2025-04-19 10:53:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 10:53:57] Running /usr/bin/apptainer --version
[2025-04-19 10:53:57] apptainer version 1.3.6-6.1
[2025-04-19 10:53:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 10:53:57] thserv06
[2025-04-19 10:53:57] apptainer works
[2025-04-19 10:53:57] Set ATHENA_PROC_NUMBER=12
[2025-04-19 10:53:57] Set ATHENA_CORE_NUMBER=12
[2025-04-19 10:53:57] Starting ATLAS job with PandaID=6607298546
[2025-04-19 10:53:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 11:40:48]  *** The last 200 lines of the pilot log: ***
[2025-04-19 11:40:48]  is_tar=False
[2025-04-19 11:40:48]  lfn=log.44075483._077512.job.log.tgz.1
[2025-04-19 11:40:48]  mtime=0
[2025-04-19 11:40:48]  protocol_id=None
[2025-04-19 11:40:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 11:40:48]  replicas=None
[2025-04-19 11:40:48]  scope=mc23_13p6TeV
[2025-04-19 11:40:48]  status=None
[2025-04-19 11:40:48]  status_code=0
[2025-04-19 11:40:48]  storage_token=
[2025-04-19 11:40:48]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6607298546/log.44075483._077512.job.log.tgz.1
[2025-04-19 11:40:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/a1/log.44075483._077512.job.log.tgz.1
[2025-04-19 11:40:48]  workdir=None
[2025-04-19 11:40:48] ]
[2025-04-19 11:40:48] 2025-04-19 09:40:18,993 | INFO     | transferring file log.44075483._077512.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6607298546/log.44075483._077512.job.log.tgz.1 to /local/data/boinc/
[2025-04-19 11:40:48] 2025-04-19 09:40:18,993 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6607298546/log.44075483._077512.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0775
[2025-04-19 11:40:48] 2025-04-19 09:40:19,023 | INFO     | adding to output.list: log.44075483._077512.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/a1/log.44075483._077512.job.log.tg
[2025-04-19 11:40:48] 2025-04-19 09:40:19,024 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 11:40:48] 2025-04-19 09:40:19,024 | INFO     | summary of transferred files:
[2025-04-19 11:40:48] 2025-04-19 09:40:19,024 | INFO     |  -- lfn=log.44075483._077512.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 11:40:48] 2025-04-19 09:40:19,024 | INFO     | stage-out finished correctly
[2025-04-19 11:40:48] 2025-04-19 09:40:19,089 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 11:40:48] 2025-04-19 09:40:19,132 | INFO     | monitor loop #213: job 0:6607298546 is in state 'finished'
[2025-04-19 11:40:48] 2025-04-19 09:40:19,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:40:48] 2025-04-19 09:40:19,299 | INFO     | PID=3086548 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 11:40:48] 2025-04-19 09:40:21,663 | INFO     | monitor loop #214: job 0:6607298546 is in state 'finished'
[2025-04-19 11:40:48] 2025-04-19 09:40:21,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:40:48] 2025-04-19 09:40:22,176 | INFO     | job 6607298546 has state=finished
[2025-04-19 11:40:48] 2025-04-19 09:40:22,176 | INFO     | preparing for final server update for job 6607298546 in state='finished'
[2025-04-19 11:40:48] 2025-04-19 09:40:22,177 | INFO     | this job has now completed (state=finished)
[2025-04-19 11:40:48] 2025-04-19 09:40:22,177 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 11:40:48] 2025-04-19 09:40:22,177 | INFO     | log transfer has been attempted: DONE
[2025-04-19 11:40:48] 2025-04-19 09:40:22,177 | INFO     | job 6607298546 has finished - writing final server update
[2025-04-19 11:40:48] 2025-04-19 09:40:22,178 | INFO     | total number of processed events: 400 (read)
[2025-04-19 11:40:48] 2025-04-19 09:40:22,184 | INFO     | executing command: lscpu
[2025-04-19 11:40:48] 2025-04-19 09:40:22,247 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 11:40:48] 2025-04-19 09:40:24,167 | INFO     | monitor loop #215: job 0:6607298546 is in state 'finished'
[2025-04-19 11:40:48] 2025-04-19 09:40:24,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:40:48] 2025-04-19 09:40:26,672 | INFO     | monitor loop #216: job 0:6607298546 is in state 'finished'
[2025-04-19 11:40:48] 2025-04-19 09:40:26,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 11:40:48] 2025-04-19 09:40:29,088 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-19 11:40:48] 2025-04-19 09:40:29,089 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6607298546/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 11:40:48] 2025-04-19 09:40:29,091 | INFO     | extracted standard info from prmon json
[2025-04-19 11:40:48] 2025-04-19 09:40:29,091 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 11:40:48] 2025-04-19 09:40:29,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 11:40:48] 2025-04-19 09:40:29,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 11:40:48] 2025-04-19 09:40:29,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 11:40:48] 2025-04-19 09:40:29,095 | INFO     | fitting pss+swap vs Time
[2025-04-19 11:40:48] 2025-04-19 09:40:29,095 | INFO     | sum of square deviations: 17003109.5
[2025-04-19 11:40:48] 2025-04-19 09:40:29,096 | INFO     | sum of deviations: 6966514729.499999
[2025-04-19 11:40:48] 2025-04-19 09:40:29,096 | INFO     | mean x: 1745054319.5
[2025-04-19 11:40:48] 2025-04-19 09:40:29,096 | INFO     | mean y: 2617237.289473684
[2025-04-19 11:40:48] 2025-04-19 09:40:29,096 | INFO     | -- intersect: -714981110919.8661
[2025-04-19 11:40:48] 2025-04-19 09:40:29,096 | INFO     | intersect: -714981110919.8661
[2025-04-19 11:40:48] 2025-04-19 09:40:29,097 | INFO     | chi2: 1.6720593398142527
[2025-04-19 11:40:48] 2025-04-19 09:40:29,097 | INFO     | -- intersect: -714981110919.8661
[2025-04-19 11:40:48] 2025-04-19 09:40:29,097 | INFO     | current memory leak: 409.72 B/s (using 38 data points, chi2=1.67)
[2025-04-19 11:40:48] 2025-04-19 09:40:29,098 | INFO     | ..............................
[2025-04-19 11:40:48] 2025-04-19 09:40:29,098 | INFO     | . Timing measurements:
[2025-04-19 11:40:48] 2025-04-19 09:40:29,098 | INFO     | . get job = 0 s
[2025-04-19 11:40:48] 2025-04-19 09:40:29,098 | INFO     | . initial setup = 1 s
[2025-04-19 11:40:48] 2025-04-19 09:40:29,098 | INFO     | . payload setup = 9 s
[2025-04-19 11:40:48] 2025-04-19 09:40:29,099 | INFO     | . stage-in = 0 s
[2025-04-19 11:40:48] 2025-04-19 09:40:29,099 | INFO     | . payload execution = 2734 s
[2025-04-19 11:40:48] 2025-04-19 09:40:29,099 | INFO     | . stage-out = 0 s
[2025-04-19 11:40:48] 2025-04-19 09:40:29,099 | INFO     | . log creation = 0 s
[2025-04-19 11:40:48] 2025-04-19 09:40:29,099 | INFO     | ..............................
[2025-04-19 11:40:48] 2025-04-19 09:40:29,218 | INFO     | 
[2025-04-19 11:40:48] 2025-04-19 09:40:29,218 | INFO     | job summary report
[2025-04-19 11:40:48] 2025-04-19 09:40:29,218 | INFO     | --------------------------------------------------
[2025-04-19 11:40:48] 2025-04-19 09:40:29,218 | INFO     | PanDA job id: 6607298546
[2025-04-19 11:40:48] 2025-04-19 09:40:29,218 | INFO     | task id: 44075483
[2025-04-19 11:40:48] 2025-04-19 09:40:29,219 | INFO     | errors: (none)
[2025-04-19 11:40:48] 2025-04-19 09:40:29,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 11:40:48] 2025-04-19 09:40:29,219 | INFO     | pilot state: finished 
[2025-04-19 11:40:48] 2025-04-19 09:40:29,219 | INFO     | transexitcode: 0
[2025-04-19 11:40:48] 2025-04-19 09:40:29,219 | INFO     | exeerrorcode: 0
[2025-04-19 11:40:48] 2025-04-19 09:40:29,219 | INFO     | exeerrordiag: 
[2025-04-19 11:40:48] 2025-04-19 09:40:29,219 | INFO     | exitcode: 0
[2025-04-19 11:40:48] 2025-04-19 09:40:29,219 | INFO     | exitmsg: OK
[2025-04-19 11:40:48] 2025-04-19 09:40:29,220 | INFO     | cpuconsumptiontime: 23310 s
[2025-04-19 11:40:48] 2025-04-19 09:40:29,220 | INFO     | nevents: 400
[2025-04-19 11:40:48] 2025-04-19 09:40:29,220 | INFO     | neventsw: 0
[2025-04-19 11:40:48] 2025-04-19 09:40:29,220 | INFO     | pid: 3093434
[2025-04-19 11:40:48] 2025-04-19 09:40:29,220 | INFO     | pgrp: 3093434
[2025-04-19 11:40:48] 2025-04-19 09:40:29,220 | INFO     | corecount: 12
[2025-04-19 11:40:48] 2025-04-19 09:40:29,220 | INFO     | event service: False
[2025-04-19 11:40:48] 2025-04-19 09:40:29,221 | INFO     | sizes: {0: 2426826, 7: 2427032, 11: 2427060, 2747: 2452206, 2749: 2461209, 2759: 2461323}
[2025-04-19 11:40:48] 2025-04-19 09:40:29,221 | INFO     | --------------------------------------------------
[2025-04-19 11:40:48] 2025-04-19 09:40:29,221 | INFO     | 
[2025-04-19 11:40:48] 2025-04-19 09:40:29,221 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-19 11:40:48] 2025-04-19 09:40:29,256 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,256 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,256 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,256 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 11:40:48] 2025-04-19 09:40:29,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,259 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 11:40:48] 2025-04-19 09:40:29,259 | INFO     | job 6607298546 has completed (purged errors)
[2025-04-19 11:40:48] 2025-04-19 09:40:29,259 | INFO     | overall cleanup function is called
[2025-04-19 11:40:48] 2025-04-19 09:40:30,269 | INFO     | --- collectZombieJob: --- 10, [3093434]
[2025-04-19 11:40:48] 2025-04-19 09:40:30,269 | INFO     | zombie collector waiting for pid 3093434
[2025-04-19 11:40:48] 2025-04-19 09:40:30,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 11:40:48] 2025-04-19 09:40:30,269 | INFO     | collected zombie processes
[2025-04-19 11:40:48] 2025-04-19 09:40:30,269 | INFO     | will attempt to kill all subprocesses of pid=3093434
[2025-04-19 11:40:48] 2025-04-19 09:40:30,477 | INFO     | process IDs to be killed: [3093434] (in reverse order)
[2025-04-19 11:40:48] 2025-04-19 09:40:30,544 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 11:40:48] 2025-04-19 09:40:30,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 11:40:48] 2025-04-19 09:40:30,548 | INFO     | did not find any defunct processes belonging to 3093434
[2025-04-19 11:40:48] 2025-04-19 09:40:30,551 | INFO     | did not find any defunct processes belonging to 3093434
[2025-04-19 11:40:48] 2025-04-19 09:40:30,552 | INFO     | ready for new job
[2025-04-19 11:40:48] 2025-04-19 09:40:30,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 11:40:48] 2025-04-19 09:40:30,553 | INFO     | **************************************
[2025-04-19 11:40:48] 2025-04-19 09:40:30,553 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 11:40:48] 2025-04-19 09:40:30,553 | INFO     | **************************************
[2025-04-19 11:40:48] 2025-04-19 09:40:30,553 | INFO     | 
[2025-04-19 11:40:48] 2025-04-19 09:40:30,555 | INFO     | architecture information:
[2025-04-19 11:40:48] 2025-04-19 09:40:30,556 | INFO     | executing command: cat /etc/os-release
[2025-04-19 11:40:48] 2025-04-19 09:40:30,573 | INFO     | cat /etc/os-release:
[2025-04-19 11:40:48] NAME="CentOS Linux"
[2025-04-19 11:40:48] VERSION="7 (Core)"
[2025-04-19 11:40:48] ID="centos"
[2025-04-19 11:40:48] ID_LIKE="rhel fedora"
[2025-04-19 11:40:48] VERSION_ID="7"
[2025-04-19 11:40:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 11:40:48] ANSI_COLOR="0;31"
[2025-04-19 11:40:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 11:40:48] HOME_URL="https://www.centos.org/"
[2025-04-19 11:40:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 11:40:48] 
[2025-04-19 11:40:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 11:40:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 11:40:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 11:40:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 11:40:48] 
[2025-04-19 11:40:48] 2025-04-19 09:40:30,573 | INFO     | **************************************
[2025-04-19 11:40:48] 2025-04-19 09:40:31,076 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-19 11:40:48] 2025-04-19 09:40:31,098 | INFO     | sufficient remaining disk space (480483737600 B)
[2025-04-19 11:40:48] 2025-04-19 09:40:31,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 11:40:48] 2025-04-19 09:40:31,098 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 11:40:48] 2025-04-19 09:40:31,099 | INFO     | update_server=False
[2025-04-19 11:40:48] 2025-04-19 09:40:31,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 11:40:48] 2025-04-19 09:40:31,099 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:40:48] 2025-04-19 09:40:31,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 11:40:48] 2025-04-19 09:40:31,100 | INFO     | aborting loop
[2025-04-19 11:40:48] 2025-04-19 09:40:31,272 | INFO     | all data control threads have been joined
[2025-04-19 11:40:48] 2025-04-19 09:40:31,333 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 11:40:48] 2025-04-19 09:40:31,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 11:40:48] 2025-04-19 09:40:31,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 11:40:48] 2025-04-19 09:40:31,674 | INFO     | all job control threads have been joined
[2025-04-19 11:40:48] 2025-04-19 09:40:32,104 | INFO     | [job] retrieve thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:32,106 | INFO     | [job] queue monitor thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:32,106 | INFO     | [job] job monitor thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:32,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 11:40:48] 2025-04-19 09:40:32,277 | INFO     | [data] control thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:32,284 | INFO     | [payload] validate_post thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:32,285 | INFO     | [payload] failed_post thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:32,370 | INFO     | all payload control threads have been joined
[2025-04-19 11:40:48] 2025-04-19 09:40:32,680 | INFO     | [job] control thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:32,748 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:32,946 | INFO     | [job] validate thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:33,259 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:33,271 | INFO     | [data] copytool_in thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:33,375 | INFO     | [payload] control thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:33,544 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:34,120 | INFO     | [data] copytool_out thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:34,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 11:40:48] 2025-04-19 09:40:38,245 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:41,485 | INFO     | job.realtimelogging is not enabled
[2025-04-19 11:40:48] 2025-04-19 09:40:42,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 11:40:48] 2025-04-19 09:40:43,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139663394293568)>', '<ExcThread(monitor, started 139662899259136)>']
[2025-04-19 11:40:48] 2025-04-19 09:40:43,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 11:40:48] 2025-04-19 09:40:43,396 | INFO     | [monitor] control thread has ended
[2025-04-19 11:40:48] 2025-04-19 09:40:48,088 | INFO     | all workflow threads have been joined
[2025-04-19 11:40:48] 2025-04-19 09:40:48,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 11:40:48] 2025-04-19 09:40:48,089 | INFO     | traces error code: 0
[2025-04-19 11:40:48] 2025-04-19 09:40:48,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 11:40:48] 2025-04-19 09:40:48,211 [wrapper] ==== pilot stdout END ====
[2025-04-19 11:40:48] 2025-04-19 09:40:48,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 11:40:48] 2025-04-19 09:40:48,222 [wrapper] pilotpid: 3086548
[2025-04-19 11:40:48] 2025-04-19 09:40:48,228 [wrapper] Pilot exit status: 0
[2025-04-19 11:40:48] 2025-04-19 09:40:48,251 [wrapper] pandaids: 6607298546
[2025-04-19 11:40:48] 2025-04-19 09:40:48,303 [wrapper] cleanup supervisor_pilot 3103049 3086549
[2025-04-19 11:40:48] 2025-04-19 09:40:48,311 [wrapper] Test setup, not cleaning
[2025-04-19 11:40:48] 2025-04-19 09:40:48,318 [wrapper] apfmon messages muted
[2025-04-19 11:40:48] 2025-04-19 09:40:48,325 [wrapper] ==== wrapper stdout END ====
[2025-04-19 11:40:48] 2025-04-19 09:40:48,332 [wrapper] ==== wrapper stderr END ====
[2025-04-19 11:40:48]  *** Error codes and diagnostics ***
[2025-04-19 11:40:48]     "exeErrorCode": 0,
[2025-04-19 11:40:48]     "exeErrorDiag": "",
[2025-04-19 11:40:48]     "pilotErrorCode": 0,
[2025-04-19 11:40:48]     "pilotErrorDiag": "",
[2025-04-19 11:40:48]  *** Listing of results directory ***
[2025-04-19 11:40:48] total 416080
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc      5111 Apr 19 06:12 queuedata.json
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc    495897 Apr 19 06:12 pilot3.tar.gz
[2025-04-19 11:40:48] -rwx------ 1 boinc boinc     37140 Apr 19 06:13 runpilot2-wrapper.sh
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc       100 Apr 19 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 11:40:48] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 10:53 run_atlas
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc       105 Apr 19 10:53 job.xml
[2025-04-19 11:40:48] -rw-r--r-- 2 boinc boinc 222326090 Apr 19 10:53 EVNT.44075481._003008.pool.root.1
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc      6815 Apr 19 10:53 init_data.xml
[2025-04-19 11:40:48] drwxrwx--x 2 boinc boinc      4096 Apr 19 10:53 shared
[2025-04-19 11:40:48] -rw-r--r-- 2 boinc boinc    508884 Apr 19 10:53 input.tar.gz
[2025-04-19 11:40:48] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:53 start_atlas.sh
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc         0 Apr 19 10:53 boinc_lockfile
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc      2578 Apr 19 10:53 pandaJob.out
[2025-04-19 11:40:48] -rw------- 1 boinc boinc       424 Apr 19 10:53 setup.sh.local
[2025-04-19 11:40:48] -rw------- 1 boinc boinc    991300 Apr 19 10:54 agis_schedconf.cvmfs.json
[2025-04-19 11:40:48] -rw------- 1 boinc boinc   1618536 Apr 19 10:54 agis_ddmendpoints.agis.ALL.json
[2025-04-19 11:40:48] drwx------ 4 boinc boinc      4096 Apr 19 10:54 pilot3
[2025-04-19 11:40:48] -rw------- 1 boinc boinc 198617945 Apr 19 11:39 HITS.44075483._077512.pool.root.1
[2025-04-19 11:40:48] -rw------- 1 boinc boinc        95 Apr 19 11:39 pilot_heartbeat.json
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc       529 Apr 19 11:39 boinc_task_state.xml
[2025-04-19 11:40:48] -rw------- 1 boinc boinc      1023 Apr 19 11:40 memory_monitor_summary.json
[2025-04-19 11:40:48] -rw------- 1 boinc boinc    337432 Apr 19 11:40 log.44075483._077512.job.log.tgz.1
[2025-04-19 11:40:48] -rw------- 1 boinc boinc      7675 Apr 19 11:40 heartbeat.json
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc        27 Apr 19 11:40 wrapper_checkpoint.txt
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc      8192 Apr 19 11:40 boinc_mmap_file
[2025-04-19 11:40:48] -rw------- 1 boinc boinc      4429 Apr 19 11:40 pilotlog.txt
[2025-04-19 11:40:48] -rw------- 1 boinc boinc    289905 Apr 19 11:40 log.44075483._077512.job.log.1
[2025-04-19 11:40:48] -rw------- 1 boinc boinc       357 Apr 19 11:40 output.list
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc       620 Apr 19 11:40 runtime_log
[2025-04-19 11:40:48] -rw------- 1 boinc boinc    645120 Apr 19 11:40 result.tar.gz
[2025-04-19 11:40:48] -rw------- 1 boinc boinc       662 Apr 19 11:40 xZKODmblEQ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmKwgLDmVrQUWm.diag
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc     11111 Apr 19 11:40 runtime_log.err
[2025-04-19 11:40:48] -rw-r--r-- 1 boinc boinc     21553 Apr 19 11:40 stderr.txt
[2025-04-19 11:40:48] HITS file was successfully produced:
[2025-04-19 11:40:48] -rw------- 1 boinc boinc 198617945 Apr 19 11:39 shared/HITS.pool.root.1
[2025-04-19 11:40:48]  *** Contents of shared directory: ***
[2025-04-19 11:40:48] total 412240
[2025-04-19 11:40:48] -rw-r--r-- 2 boinc boinc 222326090 Apr 19 10:53 ATLAS.root_0
[2025-04-19 11:40:48] -rw-r--r-- 2 boinc boinc    508884 Apr 19 10:53 input.tar.gz
[2025-04-19 11:40:48] -rw-r--r-- 2 boinc boinc     17569 Apr 19 10:53 start_atlas.sh
[2025-04-19 11:40:48] -rw------- 1 boinc boinc 198617945 Apr 19 11:39 HITS.pool.root.1
[2025-04-19 11:40:48] -rw------- 1 boinc boinc    645120 Apr 19 11:40 result.tar.gz
11:40:49 (3082651): run_atlas exited; CPU time 23344.888384
11:40:49 (3082651): called boinc_finish(0)

</stderr_txt>
]]>

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