Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:57:54 (18076): wrapper (7.7.26015): starting
02:57:54 (18076): wrapper: running run_atlas (--nthreads 12)
[2025-04-19 02:57:54] Arguments: --nthreads 12
[2025-04-19 02:57:54] Threads: 12
[2025-04-19 02:57:54] Checking for CVMFS
[2025-04-19 02:57:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-19 02:57:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-19 02:57:54] Running cvmfs_config stat atlas.cern.ch
[2025-04-19 02:57:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-19 02:57:55] 2.11.2.0 22679 370849 172324 145029 1 58 10864946 20275201 1 130560 0 24218476 99.968 7733062 54232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-19 02:57:55] CVMFS is ok
[2025-04-19 02:57:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 02:57:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 02:57:55] Further information can be found at the LHC@home message board.
[2025-04-19 02:57:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 02:57:55] Checking for apptainer binary...
[2025-04-19 02:57:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-19 02:57:55] Running /usr/bin/apptainer --version
[2025-04-19 02:57:55] apptainer version 1.3.2-1.el7
[2025-04-19 02:57:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 02:57:56] c-205-11.aglt2.org
[2025-04-19 02:57:56] apptainer works
[2025-04-19 02:57:56] Set ATHENA_PROC_NUMBER=12
[2025-04-19 02:57:56] Set ATHENA_CORE_NUMBER=12
[2025-04-19 02:57:56] Starting ATLAS job with PandaID=6607297986
[2025-04-19 02:57:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 04:20:49]  *** The last 200 lines of the pilot log: ***
[2025-04-19 04:20:49]  filetype=log
[2025-04-19 04:20:49]  guid=ed4e63a2-bfbd-4a66-b2ec-c0e6f0696a7e
[2025-04-19 04:20:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-19 04:20:49]  is_altstaged=None
[2025-04-19 04:20:49]  is_tar=False
[2025-04-19 04:20:49]  lfn=log.44075483._077318.job.log.tgz.1
[2025-04-19 04:20:49]  mtime=0
[2025-04-19 04:20:49]  protocol_id=None
[2025-04-19 04:20:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-19 04:20:49]  replicas=None
[2025-04-19 04:20:49]  scope=mc23_13p6TeV
[2025-04-19 04:20:49]  status=None
[2025-04-19 04:20:49]  status_code=0
[2025-04-19 04:20:49]  storage_token=
[2025-04-19 04:20:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6607297986/log.44075483._077318.job.log.tgz.1
[2025-04-19 04:20:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/25/log.44075483._077318.job.log.tgz.1
[2025-04-19 04:20:49]  workdir=None
[2025-04-19 04:20:49] ]
[2025-04-19 04:20:49] 2025-04-19 08:20:23,906 | INFO     | transferring file log.44075483._077318.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6607297986/log.44075483._077318.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-19 04:20:49] 2025-04-19 08:20:23,906 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6607297986/log.44075483._077318.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._077318.job
[2025-04-19 04:20:49] 2025-04-19 08:20:23,927 | INFO     | adding to output.list: log.44075483._077318.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/07/25/log.44075483._077318.job.log.tg
[2025-04-19 04:20:49] 2025-04-19 08:20:23,928 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-19 04:20:49] 2025-04-19 08:20:23,928 | INFO     | summary of transferred files:
[2025-04-19 04:20:49] 2025-04-19 08:20:23,929 | INFO     |  -- lfn=log.44075483._077318.job.log.tgz.1, status_code=0, status=transferred
[2025-04-19 04:20:49] 2025-04-19 08:20:23,929 | INFO     | stage-out finished correctly
[2025-04-19 04:20:49] 2025-04-19 08:20:24,994 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-19 04:20:49] 2025-04-19 08:20:25,076 | INFO     | job 6607297986 has state=finished
[2025-04-19 04:20:49] 2025-04-19 08:20:25,076 | INFO     | preparing for final server update for job 6607297986 in state='finished'
[2025-04-19 04:20:49] 2025-04-19 08:20:25,077 | INFO     | this job has now completed (state=finished)
[2025-04-19 04:20:49] 2025-04-19 08:20:25,077 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-19 04:20:49] 2025-04-19 08:20:25,077 | INFO     | log transfer has been attempted: DONE
[2025-04-19 04:20:49] 2025-04-19 08:20:25,077 | INFO     | job 6607297986 has finished - writing final server update
[2025-04-19 04:20:49] 2025-04-19 08:20:25,078 | INFO     | total number of processed events: 400 (read)
[2025-04-19 04:20:49] 2025-04-19 08:20:25,079 | INFO     | executing command: lscpu
[2025-04-19 04:20:49] 2025-04-19 08:20:25,106 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-19 04:20:49] 2025-04-19 08:20:25,575 | INFO     | monitor loop #369: job 0:6607297986 is in state 'finished'
[2025-04-19 04:20:49] 2025-04-19 08:20:25,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 04:20:49] 2025-04-19 08:20:28,079 | INFO     | monitor loop #370: job 0:6607297986 is in state 'finished'
[2025-04-19 04:20:49] 2025-04-19 08:20:28,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 04:20:49] 2025-04-19 08:20:29,919 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 04:20:49] 2025-04-19 08:20:29,919 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6607297986/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 04:20:49] 2025-04-19 08:20:29,920 | INFO     | extracted standard info from prmon json
[2025-04-19 04:20:49] 2025-04-19 08:20:29,920 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 04:20:49] 2025-04-19 08:20:29,920 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 04:20:49] 2025-04-19 08:20:29,921 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 04:20:49] 2025-04-19 08:20:29,921 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 04:20:49] 2025-04-19 08:20:29,924 | INFO     | fitting pss+swap vs Time
[2025-04-19 04:20:49] 2025-04-19 08:20:29,924 | INFO     | sum of square deviations: 125630262.5
[2025-04-19 04:20:49] 2025-04-19 08:20:29,925 | INFO     | sum of deviations: 22574519032.5
[2025-04-19 04:20:49] 2025-04-19 08:20:29,925 | INFO     | mean x: 1745048449.5
[2025-04-19 04:20:49] 2025-04-19 08:20:29,925 | INFO     | mean y: 2526978.743243243
[2025-04-19 04:20:49] 2025-04-19 08:20:29,925 | INFO     | -- intersect: -313565467324.161
[2025-04-19 04:20:49] 2025-04-19 08:20:29,926 | INFO     | intersect: -313565467324.161
[2025-04-19 04:20:49] 2025-04-19 08:20:29,926 | INFO     | chi2: 1.7536663937353736
[2025-04-19 04:20:49] 2025-04-19 08:20:29,926 | INFO     | -- intersect: -313565467324.161
[2025-04-19 04:20:49] 2025-04-19 08:20:29,926 | INFO     | current memory leak: 179.69 B/s (using 74 data points, chi2=1.75)
[2025-04-19 04:20:49] 2025-04-19 08:20:29,927 | INFO     | ..............................
[2025-04-19 04:20:49] 2025-04-19 08:20:29,927 | INFO     | . Timing measurements:
[2025-04-19 04:20:49] 2025-04-19 08:20:29,927 | INFO     | . get job = 0 s
[2025-04-19 04:20:49] 2025-04-19 08:20:29,927 | INFO     | . initial setup = 2 s
[2025-04-19 04:20:49] 2025-04-19 08:20:29,927 | INFO     | . payload setup = 7 s
[2025-04-19 04:20:49] 2025-04-19 08:20:29,927 | INFO     | . stage-in = 0 s
[2025-04-19 04:20:49] 2025-04-19 08:20:29,927 | INFO     | . payload execution = 4905 s
[2025-04-19 04:20:49] 2025-04-19 08:20:29,927 | INFO     | . stage-out = 0 s
[2025-04-19 04:20:49] 2025-04-19 08:20:29,928 | INFO     | . log creation = 0 s
[2025-04-19 04:20:49] 2025-04-19 08:20:29,928 | INFO     | ..............................
[2025-04-19 04:20:49] 2025-04-19 08:20:30,372 | INFO     | 
[2025-04-19 04:20:49] 2025-04-19 08:20:30,373 | INFO     | job summary report
[2025-04-19 04:20:49] 2025-04-19 08:20:30,373 | INFO     | --------------------------------------------------
[2025-04-19 04:20:49] 2025-04-19 08:20:30,373 | INFO     | PanDA job id: 6607297986
[2025-04-19 04:20:49] 2025-04-19 08:20:30,373 | INFO     | task id: 44075483
[2025-04-19 04:20:49] 2025-04-19 08:20:30,373 | INFO     | errors: (none)
[2025-04-19 04:20:49] 2025-04-19 08:20:30,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 04:20:49] 2025-04-19 08:20:30,374 | INFO     | pilot state: finished 
[2025-04-19 04:20:49] 2025-04-19 08:20:30,374 | INFO     | transexitcode: 0
[2025-04-19 04:20:49] 2025-04-19 08:20:30,374 | INFO     | exeerrorcode: 0
[2025-04-19 04:20:49] 2025-04-19 08:20:30,374 | INFO     | exeerrordiag: 
[2025-04-19 04:20:49] 2025-04-19 08:20:30,374 | INFO     | exitcode: 0
[2025-04-19 04:20:49] 2025-04-19 08:20:30,374 | INFO     | exitmsg: OK
[2025-04-19 04:20:49] 2025-04-19 08:20:30,374 | INFO     | cpuconsumptiontime: 47278 s
[2025-04-19 04:20:49] 2025-04-19 08:20:30,375 | INFO     | nevents: 400
[2025-04-19 04:20:49] 2025-04-19 08:20:30,375 | INFO     | neventsw: 0
[2025-04-19 04:20:49] 2025-04-19 08:20:30,375 | INFO     | pid: 28134
[2025-04-19 04:20:49] 2025-04-19 08:20:30,375 | INFO     | pgrp: 28134
[2025-04-19 04:20:49] 2025-04-19 08:20:30,375 | INFO     | corecount: 12
[2025-04-19 04:20:49] 2025-04-19 08:20:30,375 | INFO     | event service: False
[2025-04-19 04:20:49] 2025-04-19 08:20:30,376 | INFO     | sizes: {0: 2426653, 1: 2426852, 5: 2427058, 11: 2427114, 4916: 2453263, 4918: 2462204, 4919: 2462388, 4924: 2462558}
[2025-04-19 04:20:49] 2025-04-19 08:20:30,376 | INFO     | --------------------------------------------------
[2025-04-19 04:20:49] 2025-04-19 08:20:30,376 | INFO     | 
[2025-04-19 04:20:49] 2025-04-19 08:20:30,376 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 04:20:49] 2025-04-19 08:20:30,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,400 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,401 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,401 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,402 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 04:20:49] 2025-04-19 08:20:30,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,402 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 04:20:49] 2025-04-19 08:20:30,403 | INFO     | job 6607297986 has completed (purged errors)
[2025-04-19 04:20:49] 2025-04-19 08:20:30,403 | INFO     | overall cleanup function is called
[2025-04-19 04:20:49] 2025-04-19 08:20:31,411 | INFO     | --- collectZombieJob: --- 10, [28134]
[2025-04-19 04:20:49] 2025-04-19 08:20:31,411 | INFO     | zombie collector waiting for pid 28134
[2025-04-19 04:20:49] 2025-04-19 08:20:31,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 04:20:49] 2025-04-19 08:20:31,412 | INFO     | collected zombie processes
[2025-04-19 04:20:49] 2025-04-19 08:20:31,412 | INFO     | will attempt to kill all subprocesses of pid=28134
[2025-04-19 04:20:49] 2025-04-19 08:20:31,503 | INFO     | process IDs to be killed: [28134] (in reverse order)
[2025-04-19 04:20:49] 2025-04-19 08:20:31,554 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 04:20:49] 2025-04-19 08:20:31,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 04:20:49] 2025-04-19 08:20:31,558 | INFO     | did not find any defunct processes belonging to 28134
[2025-04-19 04:20:49] 2025-04-19 08:20:31,561 | INFO     | did not find any defunct processes belonging to 28134
[2025-04-19 04:20:49] 2025-04-19 08:20:31,561 | INFO     | ready for new job
[2025-04-19 04:20:49] 2025-04-19 08:20:31,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 04:20:49] 2025-04-19 08:20:31,562 | INFO     | **************************************
[2025-04-19 04:20:49] 2025-04-19 08:20:31,562 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 04:20:49] 2025-04-19 08:20:31,562 | INFO     | **************************************
[2025-04-19 04:20:49] 2025-04-19 08:20:31,562 | INFO     | 
[2025-04-19 04:20:49] 2025-04-19 08:20:31,563 | INFO     | architecture information:
[2025-04-19 04:20:49] 2025-04-19 08:20:31,563 | INFO     | executing command: cat /etc/os-release
[2025-04-19 04:20:49] 2025-04-19 08:20:31,580 | INFO     | cat /etc/os-release:
[2025-04-19 04:20:49] NAME="CentOS Linux"
[2025-04-19 04:20:49] VERSION="7 (Core)"
[2025-04-19 04:20:49] ID="centos"
[2025-04-19 04:20:49] ID_LIKE="rhel fedora"
[2025-04-19 04:20:49] VERSION_ID="7"
[2025-04-19 04:20:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 04:20:49] ANSI_COLOR="0;31"
[2025-04-19 04:20:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 04:20:49] HOME_URL="https://www.centos.org/"
[2025-04-19 04:20:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 04:20:49] 
[2025-04-19 04:20:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 04:20:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 04:20:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 04:20:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 04:20:49] 
[2025-04-19 04:20:49] 2025-04-19 08:20:31,580 | INFO     | **************************************
[2025-04-19 04:20:49] 2025-04-19 08:20:32,083 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 04:20:49] 2025-04-19 08:20:32,101 | INFO     | sufficient remaining disk space (29388439552 B)
[2025-04-19 04:20:49] 2025-04-19 08:20:32,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 04:20:49] 2025-04-19 08:20:32,102 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 04:20:49] 2025-04-19 08:20:32,102 | INFO     | update_server=False
[2025-04-19 04:20:49] 2025-04-19 08:20:32,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 04:20:49] 2025-04-19 08:20:32,102 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 04:20:49] 2025-04-19 08:20:32,103 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 04:20:49] 2025-04-19 08:20:32,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 04:20:49] 2025-04-19 08:20:32,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 04:20:49] 2025-04-19 08:20:32,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 04:20:49] 2025-04-19 08:20:32,103 | INFO     | aborting loop
[2025-04-19 04:20:49] 2025-04-19 08:20:32,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 04:20:49] 2025-04-19 08:20:32,735 | INFO     | all data control threads have been joined
[2025-04-19 04:20:49] 2025-04-19 08:20:33,108 | INFO     | [job] retrieve thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:33,109 | INFO     | [job] job monitor thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:33,307 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:33,365 | INFO     | [payload] failed_post thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:33,370 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:33,442 | INFO     | all payload control threads have been joined
[2025-04-19 04:20:49] 2025-04-19 08:20:33,595 | INFO     | all job control threads have been joined
[2025-04-19 04:20:49] 2025-04-19 08:20:33,740 | INFO     | [data] control thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:33,878 | INFO     | [data] copytool_in thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:34,099 | INFO     | [payload] validate_post thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:34,109 | INFO     | [data] copytool_out thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:34,448 | INFO     | [payload] control thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:34,564 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:34,564 | INFO     | [job] validate thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:34,601 | INFO     | [job] control thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:35,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 04:20:49] 2025-04-19 08:20:35,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 04:20:49] 2025-04-19 08:20:36,025 | INFO     | [job] queue monitor thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:39,591 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:42,982 | INFO     | job.realtimelogging is not enabled
[2025-04-19 04:20:49] 2025-04-19 08:20:43,987 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 04:20:49] 2025-04-19 08:20:44,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651002730304)>', '<ExcThread(monitor, started 139650568013568)>']
[2025-04-19 04:20:49] 2025-04-19 08:20:45,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 04:20:49] 2025-04-19 08:20:45,163 | INFO     | [monitor] control thread has ended
[2025-04-19 04:20:49] 2025-04-19 08:20:49,209 | INFO     | all workflow threads have been joined
[2025-04-19 04:20:49] 2025-04-19 08:20:49,209 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 04:20:49] 2025-04-19 08:20:49,210 | INFO     | traces error code: 0
[2025-04-19 04:20:49] 2025-04-19 08:20:49,210 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 04:20:49] 2025-04-19 08:20:49,317 [wrapper] ==== pilot stdout END ====
[2025-04-19 04:20:49] 2025-04-19 08:20:49,321 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 04:20:49] 2025-04-19 08:20:49,325 [wrapper] pilotpid: 21768
[2025-04-19 04:20:49] 2025-04-19 08:20:49,329 [wrapper] Pilot exit status: 0
[2025-04-19 04:20:49] 2025-04-19 08:20:49,345 [wrapper] pandaids: 6607297986
[2025-04-19 04:20:49] 2025-04-19 08:20:49,382 [wrapper] cleanup supervisor_pilot 15847 21769
[2025-04-19 04:20:49] 2025-04-19 08:20:49,386 [wrapper] Test setup, not cleaning
[2025-04-19 04:20:49] 2025-04-19 08:20:49,391 [wrapper] apfmon messages muted
[2025-04-19 04:20:49] 2025-04-19 08:20:49,394 [wrapper] ==== wrapper stdout END ====
[2025-04-19 04:20:49] 2025-04-19 08:20:49,399 [wrapper] ==== wrapper stderr END ====
[2025-04-19 04:20:49]  *** Error codes and diagnostics ***
[2025-04-19 04:20:49]     "exeErrorCode": 0,
[2025-04-19 04:20:49]     "exeErrorDiag": "",
[2025-04-19 04:20:49]     "pilotErrorCode": 0,
[2025-04-19 04:20:49]     "pilotErrorDiag": "",
[2025-04-19 04:20:49]  *** Listing of results directory ***
[2025-04-19 04:20:49] total 421156
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas      5111 Apr 18 23:50 queuedata.json
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas    495897 Apr 18 23:50 pilot3.tar.gz
[2025-04-19 04:20:49] -rwx------ 1 boincer umatlas     37140 Apr 18 23:51 runpilot2-wrapper.sh
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas       100 Apr 19 02:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 04:20:49] -rwxr-xr-x 1 boincer umatlas      7986 Apr 19 02:57 run_atlas
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas       105 Apr 19 02:57 job.xml
[2025-04-19 04:20:49] -rw-r--r-- 2 boincer umatlas 225571254 Apr 19 02:57 EVNT.44075481._003000.pool.root.1
[2025-04-19 04:20:49] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 02:57 start_atlas.sh
[2025-04-19 04:20:49] drwxrwx--x 2 boincer umatlas      4096 Apr 19 02:57 shared
[2025-04-19 04:20:49] -rw-r--r-- 2 boincer umatlas    508885 Apr 19 02:57 input.tar.gz
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas         0 Apr 19 02:57 boinc_lockfile
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas      2579 Apr 19 02:57 pandaJob.out
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas       424 Apr 19 02:57 setup.sh.local
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas    991292 Apr 19 02:58 agis_schedconf.cvmfs.json
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas   1618536 Apr 19 02:58 agis_ddmendpoints.agis.ALL.json
[2025-04-19 04:20:49] drwx------ 4 boincer umatlas      4096 Apr 19 02:58 pilot3
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas 200153736 Apr 19 04:19 HITS.44075483._077318.pool.root.1
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas       530 Apr 19 04:19 boinc_task_state.xml
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas        95 Apr 19 04:20 pilot_heartbeat.json
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas      1050 Apr 19 04:20 memory_monitor_summary.json
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas    366640 Apr 19 04:20 log.44075483._077318.job.log.tgz.1
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas      7749 Apr 19 04:20 heartbeat.json
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas      5867 Apr 19 04:20 init_data.xml
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 04:20 boinc_mmap_file
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas        27 Apr 19 04:20 wrapper_checkpoint.txt
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas      4548 Apr 19 04:20 pilotlog.txt
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas    469338 Apr 19 04:20 log.44075483._077318.job.log.1
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas       357 Apr 19 04:20 output.list
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas       620 Apr 19 04:20 runtime_log
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas    860160 Apr 19 04:20 result.tar.gz
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas     11015 Apr 19 04:20 runtime_log.err
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas       658 Apr 19 04:20 dYVNDmvPEQ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmb55KDmpaZQ5m.diag
[2025-04-19 04:20:49] -rw-r--r-- 1 boincer umatlas     21186 Apr 19 04:20 stderr.txt
[2025-04-19 04:20:49] HITS file was successfully produced:
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas 200153736 Apr 19 04:19 shared/HITS.pool.root.1
[2025-04-19 04:20:49]  *** Contents of shared directory: ***
[2025-04-19 04:20:49] total 417112
[2025-04-19 04:20:49] -rw-r--r-- 2 boincer umatlas 225571254 Apr 19 02:57 ATLAS.root_0
[2025-04-19 04:20:49] -rw-r--r-- 2 boincer umatlas     17569 Apr 19 02:57 start_atlas.sh
[2025-04-19 04:20:49] -rw-r--r-- 2 boincer umatlas    508885 Apr 19 02:57 input.tar.gz
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas 200153736 Apr 19 04:19 HITS.pool.root.1
[2025-04-19 04:20:49] -rw------- 1 boincer umatlas    860160 Apr 19 04:20 result.tar.gz
04:20:50 (18076): run_atlas exited; CPU time 47256.907071
04:20:50 (18076): called boinc_finish(0)

</stderr_txt>
]]>

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